For 11-18 numbers, the blast results are linked (the link maybe not empty even
if the reported number is zero).
12-18 numbers are set to zero for predictions identical to ensembl
cDNAs, even though the link may not be empty).
Gene | Length | Exons | tblastx exons | tblastx coverage | Genscan | Exonerate | Blastz | Blat | "Mystery" | Ensembl cDNA | GenBank mRNA | ESTHum | ESTMouse | ESTRat | PROTNR | Genome Tetraodon | CDD |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr22_31 | 249 | 2 | 1 | 95 | 0 | 1 | 1 | 1 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_34 | 627 | 4 | 4 | 93 | 4 | 3 | 4 | 4 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_48 | 1095 | 4 | 4 | 99 | 3 | 3 | 4 | 4 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_51 | 141 | 2 | 1 | 76 | 0 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_74 | 2373 | 10 | 9 | 79 | 8 | 7 | 9 | 9 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_75 | 432 | 3 | 2 | 96 | 2 | 2 | 3 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_76 | 2973 | 20 | 19 | 92 | 19 | 12 | 17 | 16 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_79 | 294 | 2 | 2 | 87 | 1 | 2 | 2 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_80 | 1287 | 5 | 3 | 91 | 3 | 3 | 2 | 3 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_133 | 564 | 2 | 2 | 99 | 2 | 1 | 2 | 2 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_135 | 1005 | 4 | 2 | 95 | 3 | 2 | 3 | 2 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_136 | 192 | 1 | 1 | 98 | 1 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_137 | 906 | 5 | 5 | 99 | 5 | 5 | 4 | 5 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_138 | 1182 | 11 | 9 | 82 | 10 | 8 | 10 | 10 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_147 | 3543 | 33 | 31 | 94 | 32 | 21 | 30 | 30 | 0 | 7 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_148 | 1500 | 4 | 4 | 99 | 4 | 4 | 4 | 4 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_149 | 1878 | 16 | 14 | 85 | 11 | 14 | 15 | 15 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_152 | 1674 | 17 | 16 | 96 | 17 | 11 | 16 | 16 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_153 | 795 | 8 | 8 | 98 | 8 | 8 | 8 | 8 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_159 | 924 | 9 | 7 | 95 | 7 | 3 | 7 | 7 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_169 | 1083 | 8 | 6 | 67 | 6 | 2 | 7 | 6 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_170 | 369 | 2 | 2 | 99 | 1 | 1 | 2 | 2 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_176 | 1521 | 10 | 9 | 89 | 8 | 7 | 9 | 8 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_178 | 510 | 3 | 3 | 99 | 3 | 0 | 3 | 3 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_347 | 270 | 4 | 2 | 91 | 2 | 0 | 2 | 2 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_358 | 147 | 1 | 1 | 95 | 1 | 1 | 1 | 1 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_374 | 189 | 2 | 1 | 78 | 1 | 1 | 1 | 1 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_384 | 195 | 1 | 1 | 81 | 1 | 0 | 1 | 1 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_386 | 156 | 2 | 1 | 69 | 1 | 0 | 2 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_685 | 456 | 1 | 1 | 92 | 1 | 1 | 1 | 1 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_698 | 288 | 2 | 2 | 100 | 1 | 2 | 1 | 2 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_813 | 282 | 2 | 1 | 70 | 2 | 1 | 2 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_830 | 192 | 3 | 1 | 33 | 2 | 1 | 2 | 2 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_834 | 1623 | 14 | 12 | 98 | 12 | 7 | 14 | 12 | 3 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_835 | 2460 | 6 | 5 | 91 | 5 | 4 | 5 | 5 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Gene | Length | Exons | HSP support. | HSP Cov. % | Genscan | Exonerate | Blastz Mus | Blat Mus | Mystery | Ensembl cDNA | GenBank mRNA | ESTHum | ESTMouse | ESTRat | PROTNR | Genome Tetra | CDDNCBI |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr22_47 | 327 | 2 | 2 | 99 | 2 | 1 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 8 | 0 |
chr22_49 | 873 | 2 | 2 | 98 | 1 | 1 | 2 | 1 | 0 | 0 | 0 | 1 | 2 | 3 | 10 | 0 | 1 |
chr22_94 | 1020 | 2 | 1 | 52 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 8 | 0 | 0 | 0 | 0 | 167 |
chr22_98 | 111 | 2 | 1 | 77 | 1 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
chr22_119 | 87 | 2 | 1 | 86 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_141 | 204 | 2 | 2 | 89 | 1 | 0 | 2 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 6 | 2 | 0 |
chr22_165 | 1296 | 2 | 2 | 42 | 1 | 0 | 2 | 1 | 0 | 0 | 0 | 10 | 0 | 0 | 0 | 0 | 220 |
chr22_188 | 1260 | 3 | 2 | 79 | 3 | 1 | 3 | 3 | 1 | 0 | 0 | 2 | 4 | 0 | 8 | 0 | 0 |
chr22_350 | 393 | 4 | 3 | 64 | 4 | 2 | 3 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 1 |
chr22_394 | 150 | 2 | 1 | 86 | 1 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_404 | 177 | 1 | 1 | 90 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 5 | 3 | 6 | 0 | 0 |
chr22_411 | 1599 | 3 | 2 | 92 | 2 | 0 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
chr22_453 | 309 | 3 | 2 | 93 | 1 | 2 | 3 | 3 | 0 | 0 | 0 | 5 | 0 | 0 | 0 | 0 | 0 |
chr22_484 | 1026 | 3 | 3 | 95 | 3 | 3 | 3 | 3 | 0 | 0 | 3 | 1 | 0 | 0 | 0 | 0 | 51 |
chr22_532 | 171 | 1 | 1 | 98 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 |
chr22_630 | 234 | 3 | 2 | 93 | 1 | 1 | 2 | 3 | 0 | 0 | 0 | 2 | 0 | 0 | 2 | 0 | 0 |
chr22_665 | 1038 | 3 | 2 | 64 | 2 | 1 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
chr22_700 | 294 | 3 | 2 | 88 | 3 | 2 | 3 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_702 | 411 | 5 | 4 | 89 | 3 | 1 | 3 | 2 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
chr22_706 | 102 | 1 | 1 | 97 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 |
chr22_721 | 333 | 3 | 2 | 91 | 1 | 2 | 3 | 2 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 |
chr22_756 | 657 | 1 | 1 | 95 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 2 | 7 | 2 | 9 | 0 | 0 |
chr22_764 | 741 | 3 | 2 | 95 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
chr22_802 | 69 | 1 | 1 | 95 | 1 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_810 | 1542 | 10 | 8 | 92 | 9 | 5 | 9 | 8 | 0 | 0 | 0 | 2 | 13 | 2 | 81 | 4 | 0 |
Gene | Length | Exons | HSP support. | HSP Cov. % | Genscan | Exonerate | Blastz Mus | Blat Mus | Mystery | Ensembl cDNA | GenBank mRNA | ESTHum | ESTMouse | ESTRat | PROTNR | Genome Tetra | CDDNCBI |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr22_1 | 54 | 1 | 1 | 100 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_46 | 147 | 1 | 1 | 100 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 4 | 12 | 0 | 1 |
chr22_69 | 114 | 1 | 1 | 100 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_111 | 381 | 2 | 2 | 85 | 0 | 1 | 2 | 2 | 0 | 0 | 0 | 0 | 12 | 8 | 3 | 0 | 0 |
chr22_113 | 60 | 1 | 1 | 100 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_125 | 258 | 2 | 1 | 81 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 1 |
chr22_128 | 6420 | 3 | 2 | 34 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 7 | 0 | 0 | 504 | 0 | 493 |
chr22_161 | 153 | 1 | 1 | 71 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 5 | 0 | 0 | 0 |
chr22_174 | 894 | 4 | 3 | 68 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 7 | 0 | 0 | 0 | 0 | 139 |
chr22_179 | 354 | 2 | 1 | 93 | 0 | 1 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 12 |
chr22_185 | 336 | 2 | 1 | 98 | 0 | 1 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 10 |
chr22_427 | 144 | 1 | 1 | 97 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_438 | 300 | 2 | 1 | 81 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
chr22_439 | 171 | 1 | 1 | 84 | 0 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_441 | 396 | 3 | 2 | 86 | 0 | 1 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_442 | 480 | 3 | 2 | 93 | 0 | 2 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_443 | 297 | 1 | 1 | 77 | 0 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_445 | 177 | 2 | 1 | 93 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_447 | 60 | 1 | 1 | 100 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_451 | 540 | 2 | 2 | 99 | 0 | 1 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_464 | 489 | 3 | 2 | 91 | 0 | 1 | 3 | 2 | 1 | 0 | 0 | 0 | 15 | 0 | 70 | 0 | 2 |
chr22_475 | 273 | 5 | 3 | 86 | 0 | 3 | 4 | 4 | 0 | 0 | 0 | 3 | 4 | 0 | 8 | 4 | 1 |
chr22_534 | 594 | 5 | 5 | 97 | 0 | 3 | 5 | 4 | 1 | 0 | 0 | 1 | 2 | 0 | 25 | 0 | 2 |
chr22_539 | 126 | 1 | 1 | 100 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_540 | 339 | 2 | 1 | 73 | 0 | 1 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_541 | 195 | 4 | 1 | 57 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
chr22_543 | 174 | 1 | 1 | 93 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_551 | 99 | 1 | 1 | 96 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_557 | 174 | 3 | 2 | 93 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 |
chr22_567 | 168 | 2 | 1 | 85 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_568 | 114 | 1 | 1 | 100 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_571 | 144 | 1 | 1 | 87 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
chr22_666 | 276 | 3 | 1 | 78 | 0 | 1 | 1 | 1 | 1 | 0 | 0 | 6 | 0 | 0 | 0 | 0 | 0 |
chr22_691 | 90 | 2 | 1 | 82 | 0 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_722 | 69 | 1 | 1 | 100 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_773 | 264 | 2 | 1 | 67 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_787 | 87 | 1 | 1 | 96 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_788 | 159 | 1 | 1 | 100 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_791 | 135 | 1 | 1 | 97 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_794 | 210 | 1 | 1 | 100 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_796 | 249 | 2 | 1 | 86 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_798 | 69 | 2 | 1 | 84 | 0 | 0 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_801 | 189 | 1 | 1 | 87 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_803 | 255 | 2 | 1 | 83 | 0 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_806 | 258 | 2 | 2 | 88 | 0 | 2 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
chr22_815 | 768 | 3 | 1 | 80 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 10 |