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ENTRY: A0029
Matrix metalloproteinase 13

REFSEQ

-NM_002427 (human)
-NM_008607 (mouse)

PUBMED

- U. Benbow and C. Brinckerhoff.
"The AP-1 site and MMP gene regulation: what is all the fuss about?"
Matrix Biology 15: 519-526. (1997)
[PMID: 9138284]

- N. Wu, S. Opalenik, J. Liu, E.D. Jansen , M.G.Giro, J.M. Davidson.
"Real-time visualization of MMP-13 promoter activity in transgenic mice."
Matrix Biology 21: 149-161. (2002)
[PMID: 11852231]


PROMOTER ANNOTATION

OrganismGenBank AccessionPromoter
Homo sapiensNM_002427[500 bps]
SitePositionSequence
AML360AACCACA
ETS1423TGGGAAGT
AP1451TGACTCA
TBP470TATAAAA

Mus musculusNM_008607[500 bps]
SitePositionSequence
AML351AACCACA
ETS1407TAGGAAGT
AP1435TGACTCA
TBP454TATAAAA


PREDICTIONS

JASPAR 0.85 0.70 0.85 0.70
PROMO 0.85 0.70 0.85 0.70
TRANSFAC 0.85 0.70 0.85 0.70


DOTPLOT



ALIGNMENTS INFORMATION

GLOBAL alignment
LOCAL alignment
AVID alignment
LAGAN alignment

 
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