Gene Prediction and Identification

Enrique Blanco

Centre de Regulaciˇ Gen˛mica, Barcelona (Spain)
Universitat PolitŔcnica de Catalunya, Barcelona (Spain)

Curso de Bioinformatica de la Escuela Complutense de Verano, Madrid (2004)


With contributions from: Josep Francesc Abril, Sergi Castellano, Robert Castelo, Genis Parra and Roderic Guigo

1. Presentation of the course

2. The genefinding problem

3. Learning to use a genome browser

4. Searching motifs with weight matrices

5. Finding coding regions in DNA sequences with PERL

6. Annotation of the human sequence HS307871

7. Downloading a gene prediction program

8. Comparative gene prediction

9. Closing remarks



Enrique Blanco Garcia © 2004
eblanco@imim.es