BLASTN 2.0MP-WashU [23-Sep-2001] [linux-i686-ILP32F64 14:26:09 27-Sep-2001] Copyright (C) 1996-2001 Washington University, Saint Louis, Missouri USA. All Rights Reserved. Reference: Gish, W. (1996-2001) http://blast.wustl.edu Notice: this program and its default parameter settings are optimized to find nearly identical sequences rapidly. To identify weak similarities encoded in nucleic acid, use BLASTX, TBLASTN or TBLASTX. Query= NM_009315 (5878 letters) Database: NM_005641 1 sequences; 52,737,903,427,583 total letters. Searching done Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N NM_005641 1405 0. 12 >NM_005641 Length = 12,278 Plus Strand HSPs: Score = 1405 (216.9 bits), Expect = 0., Sum P(12) = 0. Identities = 461/635 (72%), Positives = 461/635 (72%), Strand = Plus / Plus Query: 5219 GTCTTGA-CCATCCATTGC-ACTGGG-GA-CTACAAGGGAAGGTGGGAGTGGAGGGCATG 5274 |||| | |||| | | || ||| || ||||| |||| || ||| || | Sbjct: 11597 GTCTCCAGCCATAGCTGTCTACAGGGTGAACTACA--GGAACAACTT-GTTCAGG-CAGG 11652 Query: 5275 TGTCAACAGTAGATACCTGGAAAAGGATTCTGGGGGA-AGCAAGGACA-A---CATGAC- 5328 | | | || ||| | | || |||||||| || ||| || | || | Sbjct: 11653 GAGCGAGTGAAGCGTCCTCGCCA-GGCCTCTGGGGGGCAGGGAGGGCACAGGGCAAGCGG 11711 Query: 5329 CCTAGACCCTCCTTTCTCGCTCAGGTTCTGTCCCTCAGCACCTCAGCTCCTGGCTCAGGC 5388 ||| | | |||||||| | ||||| ||||||||||||||||| || || |||||||| Sbjct: 11712 CCT-GCCTTTCCTTTCTATC-CAGGTCCTGTCCCTCAGCACCTCGGCCCCCGGCTCAGGT 11769 Query: 5389 TCTACTACTACCTCTCCTGTCACCACCACGGTTCCCAGCGTGCAGCCCATCGTCAAGCTG 5448 || || || || || || ||||||||||| || |||||||||||||||||||||||| || Sbjct: 11770 TCCACCACCACTTCGCCCGTCACCACCACCGTCCCCAGCGTGCAGCCCATCGTCAAGTTG 11829 Query: 5449 GTCTCCACTGCTACCACTGCACCCCCAAGCACAGC-CCCTGCTGGTTCTGGCAGTGTTCA 5507 |||||||| || ||||| |||||||| ||||| || |||| ||||| |||| ||||| || Sbjct: 11830 GTCTCCACCGCCACCACCGCACCCCCCAGCACTGCTCCCT-CTGGTCCTGGGAGTGTCCA 11888 Query: 5508 GAAATACATTGTGGTCTCTCTTCCCCCAACAGGGGAAGGCAAAGGAGGCCCTCCTTCTCA 5567 ||| ||||| |||||||| ||||||||||||||||| |||||||||||||| | || || Sbjct: 11889 GAAGTACATCGTGGTCTCACTTCCCCCAACAGGGGAGGGCAAAGGAGGCCCCACCTCCCA 11948 Query: 5568 TCCTTCTCCAGTCCCCCCTTCATCTTCTTCACCATCCCCACTTGGGGGAAGTACCCTCTG 5627 |||||||||||| || || | | || || || |||||||| | || ||| |||| || Sbjct: 11949 TCCTTCTCCAGTTCCTCCCCCGGCATCGTCCCCGTCCCCACTCAGCGGCAGTGCCCTTTG 12008 Query: 5628 TGGGGGGAAGCAGGAAGCTGGGGACAGCCCCCCTCCAGCTCCAGGGACTCCAAAGGCTAA 5687 ||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || || Sbjct: 12009 TGGGGGGAAGCAGGAGGCTGGGGACAGTCCCCCTCCAGCTCCAGGGACTCCAAAAGCCAA 12068 Query: 5688 TGGCTCGCAGCCTA-CTGGACCTGGCTCTCCCCAGCCTGCTCTGTGATGTGTCACATGT- 5745 |||||| ||||| | || || ||||| || |||||||||| |||||| ||| || Sbjct: 12069 TGGCTCCCAGCCCAACT---CC-GGCTCCCCTCAGCCTGCTCCGTGATGCTCCACCTGCC 12124 Query: 5746 -GCTGACC--TCCTCTCTTGTGCAGATTCCTACACAC-T-CAA--ACA-ACCTGTGAGGG 5797 || | | | | | |||||| ||||||| | || ||| || || | Sbjct: 12125 AGCCCCCGGATTCCCACACATGCAGACATGTACACACGTGCACGTACACACATGCATGCT 12184 Query: 5798 AGGAAGGAGGAAAGGTTTTCCCCAGTGACTTTCTT 5832 | | | |||| | || | || ||| ||| Sbjct: 12185 CGCTAAGCGGAAGGAAGTTGTAGATTG-CTTCCTT 12218 Score = 1122 (174.4 bits), Expect = 0., Sum P(12) = 0. Identities = 304/387 (78%), Positives = 304/387 (78%), Strand = Plus / Plus Query: 1719 AGTTTTCTTTTTCAAGCCTGTCTC-CCATTTCACACAGGAAAAGAGAAGAAGGCACCTCC 1777 || ||||||| ||| || || ||| | |||||||| |||||||||||||| || || Sbjct: 7067 AGCTTTCTTTGTCAGACCCACCTTTCCAAT-CACACAGGGAAAGAGAAGAAGGCGCCGCC 7125 Query: 1778 CTTGCTGGAGGGGGCCCCTTTCCGCCTGAAGCCCCGCAGCATCCATGAGCTGTCTGTGGA 1837 |||||||||||||||||| || || ||||||||||| |||||||| ||| |||||||||| Sbjct: 7126 CTTGCTGGAGGGGGCCCCCTTGCGACTGAAGCCCCGGAGCATCCACGAGTTGTCTGTGGA 7185 Query: 1838 GCAGCAGCTGTATTACAAGGAGATCACGGAAGCCTGTGTGGGATCCTGTGAGGCCAAGAG 1897 ||||||||| || |||||||||||||| || ||||| ||||| ||||| ||||||||||| Sbjct: 7186 GCAGCAGCTCTACTACAAGGAGATCACCGAGGCCTGCGTGGGCTCCTGCGAGGCCAAGAG 7245 Query: 1898 AGCGGTAAGCCTGCCCTCTGGCTC-CCTTCGGTCAGAGAAAGAATCTTCCTGGAA-CAAT 1955 ||||| || ||| | ||| || | | | |||| | || |||||| | | Sbjct: 7246 GGCGGTGAGGGC-CCCACCAGCTTGCCCTGGCCCTGAGAC-GCCTCCTCCTGGGGGCCCT 7303 Query: 1956 GGGAGTTT-TCAACAG-TCAATGGCCCCACCTGACTCACTGCCC-CCTACCACAGGAAGC 2012 || || || || || |||||||||||| || ||| ||| ||||||||||| Sbjct: 7304 ATGAATTGCTCCCCACATCCCAC-CCCCACCTGACTGGCTTCCCTCCTCCCACAGGAAGC 7362 Query: 2013 TCTGCAGAGCATTGCCACGGACCCAGGGCTCTATCAGATGCTACCACGGTTCAGTACCTT 2072 ||||| ||||||||||||||||| || || ||||||||||| ||||||||||||||||| Sbjct: 7363 CCTGCAAAGCATTGCCACGGACCCTGGACTGTATCAGATGCTGCCACGGTTCAGTACCTT 7422 Query: 2073 CATCTCAGAGGGGGTGAGAGAACTGGG 2099 ||||| ||||||||||||| | || | Sbjct: 7423 TATCTCGGAGGGGGTGAGAGCA-TGAG 7448 Score = 944 (147.7 bits), Expect = 0., Sum P(12) = 0. Identities = 406/613 (66%), Positives = 406/613 (66%), Strand = Plus / Plus Query: 664 ATTTGGGGGGACTTGAAGGAGACAGGCGGCTTTAGAGTGGGGAGACAATGCACGTGTGGC 723 || | | || || |||||||||||| | ||| | | || | | | | | | Sbjct: 5482 ATGTCGAGGTGATTTGGGGAGACAGGCGGGGGGGGGGTGAGACGCCA-T-C-CTTCAG-C 5537 Query: 724 CATGCCTCCCTTGCGCTGTTTCTCATGTCCTTCTCTGTCTCTCTCCTGGTGTAGCCACTG 783 || | |||| | ||| | || | || | | |||||||||| ||||||| Sbjct: 5538 CAGGTCTCCTCCG-GCTCCCT-TCTTACCCATGCCC--CTCTCTCCTGCCACAGCCACTC 5593 Query: 784 TATGGCTTCCATGCTCAGGAGTTCATCCCTTTCCGGTTTGCCTCTGGCGGGGGCCGGGAG 843 ||||||||||| || ||||||||||| |||||||| || |||||||| |||||||||||| Sbjct: 5594 TATGGCTTCCACGCCCAGGAGTTCATTCCTTTCCGCTTCGCCTCTGGTGGGGGCCGGGAG 5653 Query: 844 CTGTACTTCTATGAAGAGAAGGAAGTGGACCTGAGTGACATCATCAACACCCCTCTGCCT 903 || ||||||||||| |||||||| || || ||||| ||||||||||| ||||||||||| Sbjct: 5654 CTTTACTTCTATGAGGAGAAGGAGGTTGATCTGAGCGACATCATCAATACCCCTCTGCCC 5713 Query: 904 CGGGTGCCTCTGGATGTCTGCCTCAAAGGTGGAGGGAGGGTAGAGCTGGGTGCCCAGGGA 963 |||||||| ||||| ||||||||||||||| | ||||||| ||||| ||||| | ||||| Sbjct: 5714 CGGGTGCCCCTGGACGTCTGCCTCAAAGGTTGGGGGAGGGGAGAGCAGGGTGGC-AGGGA 5772 Query: 964 GGAGGGGAAGCAAG-C-G-TGTGACT-GG---GAGGAACTTCACAAGAGAAGAAAGAAAC 1016 |||||| ||| | | | | |||| | || ||||| | |||||| |||||||| | Sbjct: 5773 GGAGGGAAAGGAGGACAGATGTGTGTAGGTGTGAGGAGCCTCACAATAGAAGAAAAGCTC 5832 Query: 1017 A-TCCAATATGTGAA-TGGCAAGAAGGGGACTAGGAAGGGGAATACAT-CTTCCTCCGTC 1073 | | | || || | | ||| | || |||| ||| ||||| | | Sbjct: 5833 AGTGTGAGATCCCTGGTGAGTTGCAAGGGGAGCAGGAGTGGAA-ACACGCTTCCATAG-C 5890 Query: 1074 A-GGGTCGGCTTCCCAGTGTACATACCCAGAACTCAGCTTGACGTCTTCTTTACAGCTCA 1132 | ||| | || |||| ||| ||| | | | | | | | | || | | | Sbjct: 5891 ATGGGGCAACTCCCCAATGTCCATGCGTGGCAATTCACCTT--GACACCTGC-CTTC-C- 5945 Query: 1133 TTGGCTAAGCATCGAAGGCTGC-CAGCCAGCTATACCAGAGAATCCACCCCCAGGTAAGG 1191 ||| | ||| || ||||| || | || | |||| | | | |||| | || Sbjct: 5946 TTG-C--AGC-TCATTGGCTGAGCATCGAGGGCTGCCAGCCAG-CTATCCCCGAG-AACC 5999 Query: 1192 TTTTCCTTGCCCCTTAATCTCCTT-CCCCATCC-CTGGTCCTCTAGAGCTCCTCCTACCT 1249 || || ||| |||| | ||||| || |||| |||| | | | | | ||| Sbjct: 6000 CGC-CC---CCAGGTAACCTCCATGCCCCACCCTCTGGGTCTCTGGGTCCCTTTCC-CCT 6054 Query: 1250 TCTCATCACTCCT 1262 || | || | ||| Sbjct: 6055 TC-CTTC-CACCT 6065 Score = 848 (133.3 bits), Expect = 0., Sum P(12) = 0. Identities = 230/292 (78%), Positives = 230/292 (78%), Strand = Plus / Plus Query: 4851 ATGTTAACATTTTCTTCCTGTGTCTGTTCTCTTCATAGCCTCGGCCCACACTGACCCTTT 4910 ||| | || || | ||| | || ||||| | |||| |||||||| |||||||| | Sbjct: 11198 ATGGTGCCACTTCCC-CCTTTC-CTCTTCTCCCCGCAGCCCCGGCCCACGCTGACCCTCT 11255 Query: 4911 CACAGGCCCCTCAGCCAGGCCCTCGCACGCCTGGCTTATTGAAGGTCCCTGGCTCCATTG 4970 | |||||||| ||||| ||||||||||| |||||||| ||||||| ||||||||||| | Sbjct: 11256 CGCAGGCCCCACAGCCTGGCCCTCGCACCCCTGGCTTGCTGAAGGTTCCTGGCTCCATCG 11315 Query: 4971 C-CTTGCCTGTTCAGACACTGGTGTCTGCGAGAGCTGCTGCTCCTCCTCAGCCTTCTCCT 5029 | ||| ||||| ||||||||||||||||| |||| ||||| || || |||||||| ||| Sbjct: 11316 CACTT-CCTGTCCAGACACTGGTGTCTGCACGAGCGGCTGCCCCACCACAGCCTTCCCCT 11374 Query: 5030 CCTCCAACCAAGTTTATTGTAATGTCCTCATCTTCCAGTGCCTCATCAACCCAGCAGGTA 5089 |||||||||||||||||||||||||| || || ||||| ||| |||| |||||||||||| Sbjct: 11375 CCTCCAACCAAGTTTATTGTAATGTCATCGTCCTCCAGCGCCCCATCCACCCAGCAGGTA 11434 Query: 5090 TGTGGAGCCA-GGGTGAGGG-G--TGTGATGCCCCTGGGGAAACCTCCAAGC 5137 || |||| ||| |||| | | || | |||||| | |||| ||| Sbjct: 11435 TGCAGAGCTGTGGGACAGGGAGCATCTGGAGGGCCTGGGTTA-CCTCAGAGC 11485 Score = 834 (131.2 bits), Expect = 0., Sum P(12) = 0. Identities = 292/414 (70%), Positives = 292/414 (70%), Strand = Plus / Plus Query: 2375 ATCAGACTCA-CTGACAGGGCCTGGTCTCTCTCAGGTGCATGAGCTCATTCCAGCAGTAA 2433 | |||| ||| ||| | | ||| |||| || |||| |||||||| |||||||| || | Sbjct: 8002 ACCAGAATCAGCTGTCCCGCCCTT-TCTCCCTTAGGTCCATGAGCTGATTCCAGCTGTGA 8060 Query: 2434 TGACCTGCATTGTGAGTAGACAGCTGTGCTTGCGGCCAGATGTGGACAATCACTGGGCAC 2493 |||||||||| ||||| |||||| ||||| |||| ||||||||||||||||||||||||| Sbjct: 8061 TGACCTGCATCGTGAGCAGACAGTTGTGCCTGCGACCAGATGTGGACAATCACTGGGCAC 8120 Query: 2494 TCCGGGATTTTGCTGCCCGTCTAGTGGCCCAAATCTGTAAGCATTTCAGCACAACCACCA 2553 |||| || ||||||||||| || |||||||| ||||| |||||||| ||||||||||| | Sbjct: 8121 TCCGAGACTTTGCTGCCCGCCTGGTGGCCCAGATCTGCAAGCATTTTAGCACAACCACTA 8180 Query: 2554 ACAACATCCAATCCCGAATCACTAAGACCTTTACCAAGGTAAGCCCCAAAAATGTTATCA 2613 |||||||||| ||||| ||||| |||||||| |||||||| |||| |||| | | | Sbjct: 8181 ACAACATCCAGTCCCGGATCACCAAGACCTTCACCAAGGTGAGCCAGGAAAACTTGAGCG 8240 Query: 2614 A-ATGATGCAAACCACCCCTTTAGGGCTACCTGTGAGAGAGAGAGCTTCACCCATTTGGC 2672 || ||| | | | || ||| |||| || | | || | ||| | | Sbjct: 8241 TCATT-TGCTT-C-ATCACT----GGCCACCTCTGGTTGGGGGAAGT-CACACTGGAAAC 8292 Query: 2673 A-GTGGA-A-ATGATAGTGGGAACATGGAGCCA-TGGAGAT-TG-GGCCCAAGGGACTTG 2726 | | || | | | || |||| | |||| | ||| | | | || | | | |||| Sbjct: 8293 AAGGGGGCAGAGGGAAGAGGGA-C-TGGAACTTGTGGGGGTCTAAGGGTCTTGAGGCTTG 8350 Query: 2727 AACCTTTGTGTCCTAATGTTTTGTGTTTATAGGTGATGTCAATC-CTT-CGCAG 2778 || | ||| | |||| | ||| || || ||| | ||| | ||| Sbjct: 8351 T--CTGTAATACCTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTTGCCCAG 8402 Score = 831 (130.7 bits), Expect = 0., Sum P(12) = 0. Identities = 485/768 (63%), Positives = 485/768 (63%), Strand = Plus / Plus Query: 3109 AACTCAGAA-ATCCGCCTGCCTCTGCCTCCCGA-GTGCTGGGATTAAAGGTGGGCGCCAC 3166 | ||||| ||| ||||||||| ||||||| | |||||||||||| ||||| | ||||| Sbjct: 8902 ACCTCAGGTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCAC 8961 Query: 3167 CATGCCTGGTTTGAG-G-ATGGTTTTAAA-ATT--CTA--ATC-T-TCAAAAAAAAAAAA 3217 || | |||| | | | | || |||| ||| | | | | || | ||| | Sbjct: 8962 CACGTCTGGCCTCATTGTAATGTCTTAATGATTTACAAGGAAAGTGTCTATGAAAGACT- 9020 Query: 3218 TAA-TAA-T-TCAAATCTTCCTGTCTCTACCTACTATGTGCCAGGTTAGCCTTTCTAACC 3274 || | | |||| || |||| || ||| || | || ||| || || || Sbjct: 9021 TAGGTCCCTGTCAA-TCATCCTTTCAG-ACCC-CTTCATCTTAGTTTAT--TTCCTTCCC 9075 Query: 3275 CTTTTC-ATCTGGGGTTTTCTTTTTCTCTACAGAGCTGGGTCGACGAGA-A-GACTCCAT 3331 ||| | ||||| | | || | |||| |||| | | | |||||| Sbjct: 9076 CTTACAGAGCTGGG-TGGACGAGAAG---AC-GCCCTGGA-CGACTCGTTATGGCTCCAT 9129 Query: 3332 GGACAA-CTCGA-T-A--TGGCTC-CATTGC-AGGCCTAGCAGAGCTGGGACATGATGTT 3384 | || || | | | ||| | | || |||||| ||| | | ||| | Sbjct: 9130 CG-CAGGCTTGGCTGAGCTGGGACACGATGTTAGGCCTCTGGGAGGAAGAA-ATGGGGGA 9187 Query: 3385 AGTCTC-CAGGAA-GAGCTGGGGGAGGGGCAGT-TACATTTGGTGTAGGAGGAGCCTCTG 3441 | | ||| | ||| | ||||| || | ||| | | |||| | || ||| Sbjct: 9188 GGGGACACAGTCATGAGGTTATAGAGGG-CACTGTACCCCCA-TCTGGGAG-A-CC-CTG 9242 Query: 3442 GTGACCTTTTAGCCTGGGATTCTCCCCTTCCTTCCCACCAGGTGATTAAGACGCTAATTC 3501 |||||| | || | | || ||| |||| | | | ||||| || ||||| || |||| Sbjct: 9243 GTGACCCTCCGGCTTTTGCTTGTCCTTTTCCCTTCTAACAGGTTATCAAGACTCTGATTC 9302 Query: 3502 TGCCAAGGCTGCAGCAGGAAGGGGAACGGATCCGCAGTGTCTTGGATGGGCCTGTGCTGA 3561 |||| ||||||||||||||||||| |||||||||||||| |||| || |||||||||| Sbjct: 9303 TGCCCCGGCTGCAGCAGGAAGGGGAGCGGATCCGCAGTGTGCTGGACGGCCCTGTGCTGA 9362 Query: 3562 GCAACATCGACCGTATTGGAGCAGACCATGTGCAGAGCCTTCTCCTGGTGA-TGAACCCC 3620 ||||||| ||||| |||||||||||||||||||||||||| || ||||||| |||| ||| Sbjct: 9363 GCAACATTGACCGGATTGGAGCAGACCATGTGCAGAGCCTCCTGCTGGTGACTGAAGCCC 9422 Query: 3621 ACCGTACCCGCCCCTTCTTCCCACCAGCCCCACCCTCAGTTGCCA-CAAGCATGGCTACA 3679 | || ||| | ||| | || || | ||| |||| | ||||||| || Sbjct: 9423 -CTGTCCCCACACCTGC--CC-ACT-GAGACACAGGCAGTGTTTAGCAAGCATATGG-CA 9476 Query: 3680 GTGTTTTAGCAAGCACGAGGCACATCTTA-C-TCTTTTACTCAAGAGG-C-TAGCACTGT 3735 | ||||| | | | | |||||| | || | | ||| |||| | | ||| || Sbjct: 9477 -TATTTTATTCA-CTT-ACTCCCATCTTTGCCTCATGTTTTCA-GAGGACATTGCAGAGT 9532 Query: 3736 TGTG-TAC-ATGGAA-AGCAAGGCACAAGC-AGAA-AGCCTTGA-TAGTCAATAACTT-- 3787 || ||| || | || | || | | ||| || || || || ||||| Sbjct: 9533 C-TGATACTATTTTACAG-ATGGAAAGACTGAGATTAGACT-GAGTAAGAAATAAGGGGG 9589 Query: 3788 CTGGACCACACTGCCTTCATCCTGTT-TGCCT-CACTCTATG-GCTTA 3832 |||| | | || |||| ||||| | || |||||| | || || Sbjct: 9590 CTGGGCATGA-TGGCTTCTGCCTGTAATCCCAGCACTCTGGGAGCCTA 9636 Score = 741 (117.2 bits), Expect = 0., Sum P(12) = 0. Identities = 173/204 (84%), Positives = 173/204 (84%), Strand = Plus / Plus Query: 4535 CTTCTCTACAGAAACACTGTGCCCCAGTACTGGCCAAGCTGCGCCCTCCACCTGACAATC 4594 || ||| |||||||||||||| || || ||||| ||||||||||| || |||||||||| Sbjct: 10806 CTGTTCTGCAGAAACACTGTGCTCCTGTTCTGGCAAAGCTGCGCCCACCGCCTGACAATC 10865 Query: 4595 AGGATGCCTACCGGGGAGAATTTGGGTCCCTTGGGCCCCTTCTCTGTTCCCATGTGGTGA 4654 |||| ||||| |||| |||||| ||||||||||||||||| ||||| ||||| ||||| | Sbjct: 10866 AGGACGCCTATCGGGCAGAATTCGGGTCCCTTGGGCCCCTCCTCTGCTCCCAGGTGGTCA 10925 Query: 4655 AGGCCAGGGCCCAGGCTGCTCTACAAGCTCAGCAGGTCAACAGGACCACACTCACCATCA 4714 |||| |||||||||||||||| || ||||||||||||||||||||||| || ||||||| Sbjct: 10926 AGGCTCGGGCCCAGGCTGCTCTGCAGGCTCAGCAGGTCAACAGGACCACTCTGACCATCA 10985 Query: 4715 CACAGGTCAGCTGCTGAGGGAGGA 4738 | |||||| | || | | | ||| Sbjct: 10986 CGCAGGTCCGTGGCCGGGTGGGGA 11009 Score = 724 (114.7 bits), Expect = 0., Sum P(12) = 0. Identities = 184/227 (81%), Positives = 184/227 (81%), Strand = Plus / Plus Query: 1239 TCCTCCTACCTTC-TCATCACTCCTGCTGTGACCACTTTCCCACCAGCTCCCAAAGAGCA 1297 | || ||| || ||| | |||| |||||| | ||||||||||||||||||||||||| Sbjct: 6393 TTCTACTATGCTCATCACCCCTCCCGCTGTGCCTGCTTTCCCACCAGCTCCCAAAGAGCA 6452 Query: 1298 GCAGAAGGCTGAGGCCACAGAACCCCTGAAATCAGCAAAGCCAGGCCAAGAAGAAGATGG 1357 ||||||||||| ||||||||||||||||| ||||| ||||||||||| || ||||| || Sbjct: 6453 ACAGAAGGCTGAAGCCACAGAACCCCTGAAGTCAGCCAAGCCAGGCCAGGAGGAAGACGG 6512 Query: 1358 ACCCCTGAAAGGCAAAGGTCAAGGGGCAGCTGCAGCTGATGGCAAAGGTCAGTG-TCCT- 1415 ||||||||| ||||||||||||||||| | |||| || ||||||||||||| |||| Sbjct: 6513 ACCCCTGAAGGGCAAAGGTCAAGGGGCCACCACAGCCGACGGCAAAGGTCAGTCCTCCTA 6572 Query: 1416 GGCCAGGCCCCTTCCTACTCTTATCCCAAAGCCAGGTGGTCCTCAGT 1462 ||| ||||| || |||||| |||||||||| ||| | | || Sbjct: 6573 GGCTAGGCCTCTCTGGACTCTTG-CCCAAAGCCACATGGCCGTTTGT 6618 Score = 691 (109.7 bits), Expect = 0., Sum P(12) = 0. Identities = 221/299 (73%), Positives = 221/299 (73%), Strand = Plus / Plus Query: 1 GAATTCCAGCATGGCCGAGGAGAAGAAACTGAAACTCAGCAATACTGTGTTGCCCTCTGA 60 | | ||||| ||||| ||||||||||| ||||| || ||||| |||||| ||||||| || Sbjct: 5138 GGACTCCAGAATGGCTGAGGAGAAGAAGCTGAAGCTTAGCAACACTGTGCTGCCCTCGGA 5197 Query: 61 GTCCATGAAGGTGGTGGCAGAATCTATGGGCATTGCTCAGATTCAGGAGGAGACTTGCCA 120 |||||||||||||||||| ||||| |||||||| || ||||||||||||||||| ||||| Sbjct: 5198 GTCCATGAAGGTGGTGGCTGAATCCATGGGCATCGCCCAGATTCAGGAGGAGACCTGCCA 5257 Query: 121 GCTACTGACAGATGAGGTCAGCTACCGCATCAAGGAGATTGCCCAGGTAACCCT----TT 176 ||| || || ||||||||||||||||||||||| ||||| || ||||| |||| || Sbjct: 5258 GCTGCTAACGGATGAGGTCAGCTACCGCATCAAAGAGATCGCACAGGTGACCCGGCCCTT 5317 Query: 177 -TGTCCAGCTTCCCTTTGTG-CTAACACTCCAACCTCCTATGTAACTCCAGATATCCTTG 234 ||||||||| | ||| | | | | || | || || || ||| | ||| Sbjct: 5318 CTGTCCAGCTCTACATTGGGTCCATGTCACCCAGGGCCCC-GTC-CTTAGGAT-T--TTG 5372 Query: 235 AACTTCTGACCCTCCTGCCTCCACCTCCCACTGCTGGGATTGAGGTTCTAATAC-CATG 292 || || | | ||| | || | |||| | || |||| |||| || | |||| Sbjct: 5373 GGCTGATGTCTGTTCTGTCACCGAC-CCCAG-GATGCC-TTGAAGTTC--ATGCACATG 5426 Score = 654 (104.2 bits), Expect = 0., Sum P(12) = 0. Identities = 210/282 (74%), Positives = 210/282 (74%), Strand = Plus / Plus Query: 2116 ATGAGGCTCCA-AGGGAGGGGGATGACAAGGTAGGTTCATCTGAGGG-CTCTCTGTGCC- 2172 |||||| |||| || | ||| | | || | | | || | |||||| ||| ||| || Sbjct: 7444 ATGAGGTTCCACAGTGCAGGG-ACGGCAGTGGAAGCTCCTGTGAGGGTCTCCCTGCCCCA 7502 Query: 2173 TACC-ATCAACTTC-CCCTCTCCTAGGTCCGTGTGAATGTAGTTCAGAATAACCTGGCCT 2230 | || | || |||| ||||| | ||||||||||||| || |||||||| ||||||||| Sbjct: 7503 TGCCCAGCA-CTTCTCCCTCCCACAGGTCCGTGTGAACGTGGTTCAGAACAACCTGGCCC 7561 Query: 2231 TGCTTATCTACCTGATGCGTATGGTGAAGGCCCTGATGGACAACCCCACACTGTATCTAG 2290 | || ||||||||||||||||||||||| || ||||||||||||||||| || ||||||| Sbjct: 7562 TACTCATCTACCTGATGCGTATGGTGAAAGCGCTGATGGACAACCCCACGCTCTATCTAG 7621 Query: 2291 AGAAATATGTGAGTGGTCTCGCCTACCTGCTGTCTTTTGCAGGGTC-AGGGGCCCTTCTG 2349 | ||||| ||||||| || ||| | | || ||| ||||| | |||| |||| ||| Sbjct: 7622 AAAAATACGTGAGTGATCCTGCCCATC--CTCCCTTC--CAGGGACTAGGGACCCTGCTG 7677 Query: 2350 GCAACCTCACCACAGGAGGTCTGGTATCAG-ACTCACTGACA 2390 || | || |||||| ||| | |||| | | || ||| Sbjct: 7678 CCA--C-CA--ACAGGAAGTCAGTGGTCAGCAGTGGCTCACA 7714 Score = 460 (75.1 bits), Expect = 0., Sum P(13) = 0. Identities = 110/128 (85%), Positives = 110/128 (85%), Strand = Plus / Plus Query: 550 ATCTCT-TTCCCCC-CCACCCCCTAGGATGCCCTGAAGTTCATGCACATGGGGAAACGAC 607 || ||| ||| | || |||| |||||||| |||||||||||||||||||||| || | Sbjct: 5378 ATGTCTGTTCTGTCACCGACCCC-AGGATGCCTTGAAGTTCATGCACATGGGGAAGCGGC 5436 Query: 608 AGAAGCTCACTACCAGTGACATTGACTATGCATTGAAGTTAAAGAATGTGGAGGTGATTT 667 |||||||||| ||||||||||||||||| || |||||| |||||||||| |||||||||| Sbjct: 5437 AGAAGCTCACCACCAGTGACATTGACTACGCCTTGAAGCTAAAGAATGTCGAGGTGATTT 5496 Query: 668 GGGGGGAC 675 |||| ||| Sbjct: 5497 GGGGAGAC 5504 Score = 357 (59.6 bits), Expect = 1.8e-275, Sum P(12) = 1.8e-275 Identities = 201/333 (60%), Positives = 201/333 (60%), Strand = Plus / Plus Query: 5558 CTCCTTCTCATCCTTCTCCAGTCC-CCCCTTCATCT-TCTTCACCA-TCCCCACTTGGGG 5614 |||| || ||| | || || |||| || | || | || | ||| ||| || Sbjct: 11954 CTCCAGTTCCTCCCCCGGCA-TCGTCCCCGTCCCCACTCAGCGGCAGTGCCCT-TTGTGG 12011 Query: 5615 GAAGTACCCTCTGTGGGGGGA-AGCAGGAAGCTGGGGACAGCCCC-CCTCCAGCTCCAGG 5672 | | | | | ||||| || | | ||| | || ||| | | | Sbjct: 12012 GGGGAAGCAGGAGGCTGGGGACAGTCCCCCTCCAGCTCCAGGGACTCCAAAAGC-CAATG 12070 Query: 5673 GACTCCAAAGGCTAA-T--GGCTCGCAGCCTACTGGACCTGGCT-CTCC-CCAGCCTGCT 5727 | |||| | | | || | ||||| | | ||| || | | |||| || ||| || Sbjct: 12071 G-CTCCCA-GCCCAACTCCGGCTCCCCTCAGCCTGCTCCGTGATGCTCCACCTGCCAGCC 12128 Query: 5728 CTGTGATGTGTCACATGTGCTGACCTCCTCTCTTGTGCAGATTCCTACACACTCAAACAA 5787 | ||| | |||| ||| ||| | | | ||||| | | ||||| || | Sbjct: 12129 CCCGGAT-TCCCACACATGCAGACATGTACACACGTGCACGTAC--ACACATGCATGCTC 12185 Query: 5788 CCTGTGAGGGAGGAAGGAGGAAAGGTTTTCCC-CA-GTGACTTTCTTTTTAGATATTGTA 5845 || | || |||||| | | | |||| || || ||||||||||||||||||||| Sbjct: 12186 GCTAAGCGGAAGGAAGTTGTAGATTGCTTCCTTCATGTCACTTTCTTTTTAGATATTGTA 12245 Query: 5846 CAGTAAGTTCCTCAGAATAAAAGTTGGATTTGT 5878 ||| |||| ||||||||||||||| | ||||| Sbjct: 12246 CAGCCAGTTTCTCAGAATAAAAGTTTGGTTTGT 12278 Score = 253 (44.0 bits), Expect = 7.5e-228, Sum P(9) = 7.5e-228 Identities = 77/98 (78%), Positives = 77/98 (78%), Strand = Plus / Plus Query: 3086 CTTTGTAGACCAGGCTGGTCTCAAACTCAGA---A----ATCCGCCTGCCTCTGCCTCCC 3138 || ||| | |||||||||| |||||||||| | ||||||| |||| ||||||| Sbjct: 6827 CTATGTTGGCCAGGCTGGTTTCAAACTCAGCCTCATGTGATCCGCCCGCCTTGGCCTCCC 6886 Query: 3139 GA-GTGCTGGGATTAAAGGTGGGCGCCACCATGCCTGG 3175 | |||||||||||| ||||| | ||||||||||| || Sbjct: 6887 AAAGTGCTGGGATTACAGGTGTGAGCCACCATGCCAGG 6924 Score = 252 (43.9 bits), Expect = 4.6e-110, Sum P(5) = 4.6e-110 Identities = 90/123 (73%), Positives = 90/123 (73%), Strand = Plus / Plus Query: 3079 GGACTCACTTTGT-AGACCAGGCTGGTCTCAAACTCA-GA---A---ATCCGCCTGCCTC 3130 || |||| |||| || ||||| ||||||||| ||| || | ||||||| ||||| Sbjct: 1490 GGTTTCACCTTGTTAG-CCAGGATGGTCTCAATCTCCTGACCTAGTGATCCGCCCGCCTC 1548 Query: 3131 TGCCTCCCGA-GTGCTGGGATTAAAGGTGGGCGCCACCATGCCTGGTTTGAGGATGGTTT 3189 ||||||| | |||||||||||| ||| | | ||||||| | | || || || ||| Sbjct: 1549 GGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGGCCGGCCC-AGTTTGCTTT 1607 Query: 3190 TAA 3192 ||| Sbjct: 1608 TAA 1610 Score = 212 (37.9 bits), Expect = 1.3e-294, Sum P(11) = 1.3e-294 Identities = 86/124 (69%), Positives = 86/124 (69%), Strand = Plus / Plus Query: 3058 GTGTGTAGCCCTGGCTGTC-CTGGACTCACTTTGTAGACCAGGCTGG-TCTCAAACTCA- 3114 | ||| || || | || | || |||||| | | ||| ||| ||||| ||| Sbjct: 10064 GAGTGCAGTGGTG-CGATCTCAGG-CTCACT--GCA-ACCT--CTGCCTCTCAGGTTCAA 10116 Query: 3115 GAAATCCGCCTGCCTCTGCCTCCCGAGT-GCTGGGATTAAAGGTGGGCGCCACCATGCCT 3173 | ||| | | |||||| ||||||| ||| ||||||| | ||| |||||||||||||| Sbjct: 10117 GCAATTCTCATGCCTCAGCCTCCCAAGTAGCTGGGACCACAGGCACGCGCCACCATGCCT 10176 Query: 3174 GGTT 3177 || | Sbjct: 10177 GGCT 10180 Score = 205 (36.8 bits), Expect = 5.7e-108, Sum P(5) = 5.7e-108 Identities = 87/131 (66%), Positives = 87/131 (66%), Strand = Plus / Plus Query: 3083 TCACTTTGTAGACCAGGCTGGTCTCAAACTCA-GAA------ATCCGCCTGCCTCTGCCT 3135 |||| ||| | ||||| ||||||| | ||| || ||||| | ||||| |||| Sbjct: 3564 TCACCATGTTGGCCAGGATGGTCTCCATCTCTTGACCTGGTGATCCGTCCGCCTCGGCCT 3623 Query: 3136 CCCGA-GTGCTGGGATTAAAGGTGGGCGCCACCATGCCTGGTTTGAGG-ATGGTTTTAAA 3193 ||| | |||||||||||| ||||| | |||| | ||| | || || ||||| Sbjct: 3624 CCCAAAGTGCTGGGATTACAGGTGTGAGCCAACGCGCCCGACCGGATTTATTTTTTTACC 3683 Query: 3194 ATTCTAATCTT 3204 || | | || Sbjct: 3684 TTTTTTTTTTT 3694 Score = 204 (36.7 bits), Expect = 1.1e-138, Sum P(7) = 1.1e-138 Identities = 82/120 (68%), Positives = 82/120 (68%), Strand = Plus / Plus Query: 3056 CTGTGTGTAGCCCTGGCTGTC-CTGGACTCACTTTGTAGACCAGGCTGGTCTCAAACTCA 3114 ||| | || || |||| || ||||||| | | || ||| | | |||| Sbjct: 3724 CTG-GAGT-GCAATGGCGCAATCTCAACTCACT--GCAAACTCTACTGC-CG-AGGCTCA 3777 Query: 3115 -GAAATCCGCCTGCCTCTGCCTCCCGAGT-GCTGGGATTAAAGGTGGGCGCCACCATGCC 3172 | || | |||||||| ||||||| ||| |||||||||| ||| ||||||||||||| Sbjct: 3778 AGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCACGCGCCACCATGCC 3837 Score = 200 (36.1 bits), Expect = 1.5e-138, Sum P(6) = 1.5e-138 Identities = 82/118 (69%), Positives = 82/118 (69%), Strand = Plus / Plus Query: 3061 TGTAGCCC--TGGCT-G-TCCTGGACTCACTTTGTAGACCAGGCTGGTCTCAAACTCA-G 3115 || || || |||| | || ||| |||||| | | ||| | || || ||| | Sbjct: 3416 TGGAGTCCAGTGGCACGATCTTGG-CTCACT--GCA-ACCTC-CACTTCCCAGGTTCAAG 3470 Query: 3116 AAATCCGCCTGCCTCTGCCTCCCGAGT-GCTGGGATTAAAGGTGGGCGCCACCATGCC 3172 || | | |||||| ||||||||||| ||||||| || ||||| | ||||||| ||| Sbjct: 3471 TGATTCTCTTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCGTGCCACCACGCC 3528 Score = 195 (35.3 bits), Expect = 2.4e-138, Sum P(6) = 2.4e-138 Identities = 49/60 (81%), Positives = 49/60 (81%), Strand = Plus / Plus Query: 3114 AGAAATCCGCCTGCCTCTGCCTCCCGAGT-GCTGGGATTAAAGGTGGGCGCCACCATGCC 3172 || || | ||||||| ||||||||||| |||| ||||| ||||| |||||||||||| Sbjct: 2801 AGTGATTCTTCTGCCTCAGCCTCCCGAGTAGCTGTGATTACAGGTGCCCGCCACCATGCC 2860 Score = 179 (32.9 bits), Expect = 3.7e-293, Sum P(11) = 3.7e-293 Identities = 103/172 (59%), Positives = 103/172 (59%), Strand = Plus / Plus Query: 3028 TTTTTTTGGTTTTTGAAACAGGATTTTTCTGTGTGTAGCCCTGGC-TGTCCTGGACTCA- 3085 ||||||| ||| ||| |||| | ||||| | || || ||| | || Sbjct: 10323 TTTTTTTTTTTTCTGAGACAGTCTCACTCTGTCACCCAAGCGGGAGTGCACTG-ATGCAA 10381 Query: 3086 -CTTTGTAGAC--CAGGCTGGTCT--CAAACT-CAGAAATCCGCCTGCCTCTGCCTCCCG 3139 || || || ||| || | | | || || | | |||| |||||| Sbjct: 10382 CCTCTGCTCACTGCAGCCTCCACCACCTGGGTTCAAGCATTCTAGTACCTCAACCTCCCC 10441 Query: 3140 AGT-GCTGGGATTAAAGGTGGGCGCCACCATGCCTGGTTTGAGGATGGTTTT 3190 ||| ||||||| || ||||| | |||||||||||||| | | || ||| Sbjct: 10442 AGTAGCTGGGACTACAGGTGCGTGCCACCATGCCTGGCTAGTTTTTGTATTT 10493 Score = 178 (32.8 bits), Expect = 0., Sum P(12) = 0. Identities = 54/74 (72%), Positives = 54/74 (72%), Strand = Plus / Plus Query: 3104 TCTCAAACTCAGAA-ATCCGCCTGCCTCTGCCTCCCGA-GTGCTGGGATTAAAGGTGGGC 3161 || | | ||||| ||| |||||||| ||||||| | |||||||||||| ||| | Sbjct: 8752 TCCCGACCTCAGGTGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACGGGTATGA 8811 Query: 3162 GCCACCATGCCTGG 3175 ||||| ||||| Sbjct: 8812 GCCACTGCACCTGG 8825 Score = 177 (32.6 bits), Expect = 1.5e-137, Sum P(6) = 1.5e-137 Identities = 47/60 (78%), Positives = 47/60 (78%), Strand = Plus / Plus Query: 3114 AGAAATCCGCCTGCCTCTGCCTCCCGAGTG-CTGGGATTAAAGGTGGGCGCCACCATGCC 3172 || ||| | |||||||| ||||||||||| |||||| || ||||| | ||||| ||| Sbjct: 2194 AGCAATTCTCCTGCCTCAGCCTCCCGAGTATCTGGGACTACAGGTGCACATCACCACGCC 2253 Score = 177 (32.6 bits), Expect = 1.5e-137, Sum P(6) = 1.5e-137 Identities = 55/72 (76%), Positives = 55/72 (76%), Strand = Plus / Plus Query: 3111 CTCA-GAAATCCGCCTGCCTCTGC--C-TCCCGAGT-GCTGGGATTAAAGGTGGGCGCCA 3165 |||| | || | |||||||| || | |||||||| || |||| || ||||| |||| Sbjct: 1390 CTCACGCCATTCTCCTGCCTCAGCAGCCTCCCGAGTAGCAGGGACTATAGGTGCCTGCCA 1449 Query: 3166 CCATGCCTGGTT 3177 |||||||||| | Sbjct: 1450 CCATGCCTGGCT 1461 Score = 172 (31.9 bits), Expect = 2.1e-202, Sum P(8) = 2.1e-202 Identities = 108/179 (60%), Positives = 108/179 (60%), Strand = Plus / Plus Query: 2757 AGGTGATGTCAATCCTTCGCAGTTAGTCTTTCTTTTTTTTTTTTTCCTTT-TTCCAGTTT 2815 |||| | || || | | | | | | ||| | ||| |||| ||||| || Sbjct: 6007 AGGTAACCTCCATGCCCCACCCTCTGGGTCTCTGGGTCCCTTTCCCCTTCCTTCCACCTT 6066 Query: 2816 TGTTTTTTTGAGACAGAGTTTCTCTGTGTAGCCCTAACTGCCCTGGAACTTGCTCTGTAG 2875 | ||||||||||||||||| || || ||| ||| ||| || | | ||| || Sbjct: 6067 T-TTTTTTTGAGACAGAGTCTCACTCTGTTGCCTGTGCTGGAGTGCAGGA-GTGCTGGAG 6124 Query: 2876 C-CAG-G-CTTGGCCTTGAACTCAGAG--ATCCAC--CCTCCTGTGAGTTCTGG-GATT 2926 ||| | || |||| |||| | | || ||||||| | |||| | |||| Sbjct: 6125 TGCAGTGGCTCAATCTTGG-CTCACTGCAAACCTGTGCCTCCTG-G-GTTCACGCGATT 6180 Score = 170 (31.6 bits), Expect = 1.3e-294, Sum P(11) = 1.3e-294 Identities = 62/88 (70%), Positives = 62/88 (70%), Strand = Plus / Plus Query: 2769 TCCTTCGCAG-TTAGTCTTTCTTTTTTTTTTTTTCCTTTTTCCAGTTTTGTTTTTTTGAG 2827 || ||| || ||||| | | |||| |||||| |||| | |||| |||||||||| Sbjct: 9981 TCATTCACACATTAGTGCC-CATGTTTTCTTTTTC-TTTT--CTTTTTT-TTTTTTTGAG 10035 Query: 2828 ACAGAGTTTCTCTGTGTAGCCCTAACTG 2855 | |||| || || |||| ||| ||| Sbjct: 10036 ATGGAGTCTCACTCTGTAACCCAGGCTG 10063 Score = 169 (31.4 bits), Expect = 3.1e-291, Sum P(11) = 3.1e-291 Identities = 55/77 (71%), Positives = 55/77 (71%), Strand = Plus / Plus Query: 3118 ATCCGCCTGCCTCTGCCTCCCGAGT-GCTGGGATTAAAGGTGGGCGCCACCATGCCTGGT 3176 || | |||||||| ||||||||||| |||||||||| ||| | ||| ||| || | Sbjct: 8633 ATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCATGTGCCGCCACACCCAGC 8692 Query: 3177 TTGAGGATG-GTTTTAA 3192 | | || ||||| | Sbjct: 8693 TA-ATTTTGTGTTTTTA 8708 Score = 165 (30.8 bits), Expect = 1.6e-292, Sum P(11) = 1.6e-292 Identities = 49/66 (74%), Positives = 49/66 (74%), Strand = Plus / Plus Query: 3109 AACTCAGAA-ATCCGCCTGCCTCTGCCTCCCGA-GTGCTGGGATTAAAGGTGGGCGCCAC 3166 | ||||| ||| ||| ||||| ||||||| | |||||||||||| ||| | |||| Sbjct: 10246 ACCTCAGGTGATCTGCCAGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAACCAC 10305 Query: 3167 CATGCC 3172 || || Sbjct: 10306 CACACC 10311 Score = 164 (30.7 bits), Expect = 1.5e-291, Sum P(11) = 1.5e-291 Identities = 188/322 (58%), Positives = 188/322 (58%), Strand = Plus / Plus Query: 2710 TGGGCCCAAGGGACTTGA-A-CCTTTGTGTCCTAATGTTTTGTGTTTATAGGTGATGTCA 2767 || | || | || || | ||| | ||| || || || | ||| ||| ||| | Sbjct: 10244 TGACCTCAGGTGATCTGCCAGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGC-ATG--A 10300 Query: 2768 ATCCTTCGCAGTTAGTCTTTCTTTTTTTTTTTTTCCTTTTTCCAGTTTTGTTTTTTTGAG 2827 | || | || || | |||||||||||||||| || | ||| | | | | Sbjct: 10301 A-CCACCACACCCAGCCATTCTTTTTTTTTTTTTTCTGAGAC-AGTCTCACTCTGTCACC 10358 Query: 2828 --A-CAG-AGTTTCTCTG-TGTAGCC-CTAACTGCCCTGGAACTTGCTCTGTAGCCAGGC 2881 | | | ||| | ||| || | || || || | ||| | | | | | | || || Sbjct: 10359 CAAGCGGGAGTG-CACTGATGCAACCTCTG-CT-CACTGCAGCCTCCACC--A-CCTGGG 10412 Query: 2882 TTGGCCTTGAACTC-AG-AGATCCACC-CTCCTGTGAGTTCTGGGATTAAAAGGCATGTG 2938 || | | | || || | || ||| | || || || |||||| || | || ||| Sbjct: 10413 TT---CAAGCATTCTAGTACCTCAACCTCCCCAGT-AG--CTGGGACTACA-GGTGCGTG 10465 Query: 2939 CCACCACTTTGTGGC-AGCCATCGCTTTTTTGAAACAGTATACCATGTACTCCA----GG 2993 |||||| | |||| || | | ||||| || || | | ||||| || Sbjct: 10466 CCACCA-TGCCTGGCTAGTTTTTGTATTTTTAGTGGAG-ATGAGGTTT-CTCCATTTTGG 10522 Query: 2994 C-AGGC-CTTAAACTTACAGTG 3013 | |||| ||| | || | |||| Sbjct: 10523 CCAGGCTCTTGACCTCA-AGTG 10543 Score = 164 (30.7 bits), Expect = 2.2e-105, Sum P(5) = 2.2e-105 Identities = 56/82 (68%), Positives = 56/82 (68%), Strand = Plus / Plus Query: 3111 CTCAGA-AATCCGCCTGCCTCTGCCTCCCGA-GTGCTGGGATTAAAGGTGGGCGCCACCA 3168 |||| | ||||| || ||||||||| || | |||||||||||| || | | | ||| Sbjct: 913 CTCAAACAATCCCCCCACCTCTGCCTTCCAAAGTGCTGGGATTACTGGGGTGAGTTACCT 972 Query: 3169 TGCCTGGTTTGAGGATGGTTTT 3190 | ||| | | || |||| Sbjct: 973 CTCTTGGCTCCAATTTGCTTTT 994 Score = 156 (29.5 bits), Expect = 6.4e-141, Sum P(6) = 6.4e-141 Identities = 170/297 (57%), Positives = 170/297 (57%), Strand = Plus / Plus Query: 2728 ACCTTTGTGTCCTAATGTTTTGTGTTTA-TAGG-TGATGTCAA-TC-CTTCGCAGTTAGT 2783 |||| || | | || || || | ||| | || ||| || | || ||| || | | Sbjct: 929 ACCTCTGCCTTCCAAAGTGCTGGGATTACTGGGGTGA-GTTACCTCTCTTGGCTCCAA-T 986 Query: 2784 CTTTCTTTTTTTTTTTTTCCTTTTTCCAGTTTTGTTTTTTTGAGACAGAGTTTCTCTGT- 2842 || |||||||||||||| | ||| | | | | | ||| | | || Sbjct: 987 -TTGCTTTTTTTTTTTTTTTGAGATGGAGTCTCTCTCTATCGCC-CAG-GCTGGAGTGCA 1043 Query: 2843 GTAGCCCTAACT-GC--C-CTGGAACTTGCTCTGTAGCCAGGCTTGGCCTTGAACTCAGA 2898 || || | | || | | ||| ||| | | || | || || | | | ||| | Sbjct: 1044 GTGGCACGATCTCGGTTCACTGCAACCTCCGCT-T--CCTGGTTCAAGCG-GTTCTCCCA 1099 Query: 2899 GATCCACCCTCCTGTGAGTTCTGGGATTAAAAGGCATGTGCCACCACTTTGTGGC-AGCC 2957 || | ||||| || |||||| || | ||| ||||||| | | ||| | Sbjct: 1100 CCTC-AGCCTCCCA-GATAGCTGGGACTACA-GGCGCCCGCCACCA-TGTCTGGTTAATT 1155 Query: 2958 ATCGCTTTTTTG-AAA----CAG--TAT-ACCATGTACTCCAGGCAGGCCTTAAACT 3006 | | ||||| ||| ||| | | ||||||| ||||| || || |||| Sbjct: 1156 TTTGTGTTTTTACAAAAAGACAGGGTTTCACCATGTTGGCCAGGGTGGTCTCGAACT 1212 Score = 151 (28.7 bits), Expect = 7.5e-228, Sum P(9) = 7.5e-228 Identities = 51/68 (75%), Positives = 51/68 (75%), Strand = Plus / Plus Query: 2788 CTTTTTTTTTTTTTCCTTTTTCCAGTTTTGTTTTTTTGAGACAGAGTTTCTCTGTGTAGC 2847 | ||| |||| |||||||||| |||||||||| |||||||||| || || ||| | Sbjct: 6612 CGTTTGTTTTGTTTCCTTTTT----TTTTGTTTTT--GAGACAGAGTCTCACTCTGTCAC 6665 Query: 2848 CCTAACTG 2855 || ||| Sbjct: 6666 CCAGGCTG 6673 Score = 150 (28.6 bits), Expect = 8.0e-198, Sum P(8) = 8.0e-198 Identities = 40/51 (78%), Positives = 40/51 (78%), Strand = Plus / Plus Query: 3118 ATCCGCCTGCCTCTGCCTCCCGA-GTGCTGGGATTAAAGGTGGGCGCCACC 3167 |||| || |||| ||||||| | |||||||||||| ||| | |||||| Sbjct: 6314 ATCCACCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACC 6364 Score = 150 (28.6 bits), Expect = 0., Sum P(13) = 0. Identities = 72/111 (64%), Positives = 72/111 (64%), Strand = Plus / Plus Query: 357 CCCGTATTTC-TCAGGGT-CAGAGATGAGTATCTCTTCTTAGTGGGGCATTGGTGGGGTA 414 || | | | | |||| | || | || | | |||| | | ||||| | ||| | Sbjct: 1748 CCTGGAATACATCAGTGAACATA-ATAAAGAGCTCTG-TCGGCCGGGCACAG-TGGCTCA 1804 Query: 415 TGCCTTTAATCCCAGCACTT-GGTAGTCAGAGGCAGGG-GGAATCTCTTGA 463 |||| |||||||||||||| || || | ||| ||| |||| | | ||| Sbjct: 1805 CGCCTGTAATCCCAGCACTTTGGGAGGCC-AGGGTGGGTGGAA-CACCTGA 1853 Score = 149 (28.4 bits), Expect = 8.1e-292, Sum P(11) = 8.1e-292 Identities = 55/76 (72%), Positives = 55/76 (72%), Strand = Plus / Plus Query: 3082 CTCACTTTGTAGACCAGGCTGGTCTCAAACTCA-GAAATCCGCCTGCCTCTGCCTCCCGA 3140 ||| ||| | | ||||||| | | | |||| | |||| || |||| ||||||| | Sbjct: 10512 CTCCATTT-TGG-CCAGGCTC-T-TGAC-CTCAAGTGATCCACCCACCTCAGCCTCCCAA 10566 Query: 3141 GTGCTGGGATTAAAGG 3156 |||||||||| | ||| Sbjct: 10567 GTGCTGGGAT-ACAGG 10581 Score = 149 (28.4 bits), Expect = 2.9e-141, Sum P(7) = 2.9e-141 Identities = 67/100 (67%), Positives = 67/100 (67%), Strand = Plus / Plus Query: 2710 TGGGCCCAAGGGA-CTTGA-ACCTTTGTGTCCTAATGTTTTGTGTTTATAGG--TGATGT 2765 ||||| |||| || | | ||||| | ||| | || ||| ||| ||| ||| | Sbjct: 4552 TGGGCTCAAGCGATCCTCCTACCTTGGGCTCCCAGAGTGTTGGAATTACAGGCATGA-GC 4610 Query: 2766 CAATCCTTCGCAGTT-AGTCTTTCTTTTTTTTTTTTTCCT 2804 || | | |||| || ||| |||||||||||||||| Sbjct: 4611 CACTAGGCC-CAGTCCAGA-TTT-TTTTTTTTTTTTTCCT 4647 Score = 142 (27.4 bits), Expect = 2.7e-140, Sum P(6) = 2.7e-140 Identities = 48/65 (73%), Positives = 48/65 (73%), Strand = Plus / Plus Query: 2791 TTTTTTTTTTTCCTTTTTCCAGTTTTGTTTTTTTGAGACAGAGTTTCTCTGTGTAGCCCT 2850 ||| |||||| ||||| |||| ||||||||||||||||| | || ||| |||| Sbjct: 1283 TTTGCTTTTTTTGTTTTT----TTTT-TTTTTTTGAGACAGAGTCTGGCTCTGTTGCCCA 1337 Query: 2851 AACTG 2855 ||| Sbjct: 1338 GGCTG 1342 Score = 140 (27.1 bits), Expect = 7.4e-141, Sum P(7) = 7.4e-141 Identities = 36/46 (78%), Positives = 36/46 (78%), Strand = Plus / Plus Query: 2797 TTTTTCCTTTTTCCAGTTTTGTTTTTTTGAGACAGAGTTTCTCTGT 2842 ||| | |||| || |||| ||||||||||||||||| ||||| Sbjct: 3670 TTTATTTTTTTACCTTTTTTTTTTTTTTGAGACAGAGTCCATCTGT 3715 Score = 139 (26.9 bits), Expect = 3.7e-140, Sum P(6) = 3.7e-140 Identities = 107/191 (56%), Positives = 107/191 (56%), Strand = Plus / Plus Query: 2727 AACCTTTGTGTCCTAATGTTTTGTGTTTATAGGTGATGTCAATCCTTCGCA-GTTAGTCT 2785 | ||| ||| ||| | | | | || | | |||| |||| | | | || || Sbjct: 605 ACCCTACCTGTACTACTCCTAAGCAGT-ATTGAT-ATGTTAATCTTCCTAATGTCCAACT 662 Query: 2786 TTCTTTTTTTTTTTTTCCTTTTTCCAGTTTTGTTTTTTTGAGACAGAGTTTCTCTGTGTA 2845 | | ||| ||||| ||| |||||||||||||| ||||| | ||| Sbjct: 663 GCAAGTGTGCCACTTTAATTTTTTTTTGTTT-TTTTTTTGAGACAGGGTTTCCGTCTGTT 721 Query: 2846 GCCCTAACTGCCCTGGAACTTGCTC--TGTAGCCAGGCTTG-GCCTTGAACTCAG-AGAT 2901 ||| ||| || | | || | | | | | || |||| ||||| || | Sbjct: 722 ACCCAGGCTGTTGTGCAG-TGGCACCATCTTGGCTCACTGCAGCCTCCAACTCCTCAGTT 780 Query: 2902 CCACCC-TCCT 2911 | | | |||| Sbjct: 781 CAAGCGATCCT 791 Score = 137 (26.6 bits), Expect = 0., Sum P(12) = 0. Identities = 43/61 (70%), Positives = 43/61 (70%), Strand = Plus / Plus Query: 2804 TTTTTCCAGTTTTGTTTTTTTGAGACAGAGTTTCTCTGTG-TAGCCCTAACTGCCCTGGA 2862 ||||| |||||||||||||||| ||||||| || | | |||| ||| || | Sbjct: 8525 TTTTTTTGTTTTTGTTTTTTTGAGATGGAGTTTCGCTCTTCTTGCCCAGGCTGGAGTGCA 8584 Query: 2863 A 2863 | Sbjct: 8585 A 8585 Score = 132 (25.9 bits), Expect = 2.3e-133, Sum P(7) = 2.3e-133 Identities = 42/57 (73%), Positives = 42/57 (73%), Strand = Plus / Plus Query: 399 GGGCATTGGTGGGGTATGCCTTTAATCCCAGCACT-TGGTAGTC-AGAGGCAGGGGG 453 |||||| | ||| | ||||| ||||||||||||| ||| || | || | | | || Sbjct: 9592 GGGCAT-GATGGCTTCTGCCTGTAATCCCAGCACTCTGGGAGCCTAGGAGTATGAGG 9647 Score = 128 (25.3 bits), Expect = 0., Sum P(11) = 0. Identities = 90/148 (60%), Positives = 90/148 (60%), Strand = Plus / Plus Query: 2811 AGTTTTGT-TTTTT--T-GAGACAGAGTTTCTCTGTGTAGCCCTAAC-TGCCCTGGAACT 2865 | |||||| ||||| | ||||||||||||| | ||| | | || || |||||||| Sbjct: 8839 ATTTTTGTATTTTTAGTAGAGACAGAGTTTCACCATGTTGAC-TAGGGTGGTCTGGAACT 8897 Query: 2866 TGCTCTGTAGC-CAGGCT-TG-GCCTTGAACTCAGAGATCCACCCTCCTGTGAGTTCTGG 2922 | ||| | | |||| | |||| | ||| | ||| | ||| || | | || Sbjct: 8898 --C-CTG-ACCTCAGGTGATCTGCCT-GC-CTCGGCCTCCCAAAGTGCTGGGATTACAGG 8951 Query: 2923 GATTAAAAGGCATGTGCCACCACTTTGT 2950 | | || || || | |||| Sbjct: 8952 TGTGAGCCACCACGTCTGGCCTCATTGT 8979 Score = 127 (25.1 bits), Expect = 1.3e-139, Sum P(6) = 1.3e-139 Identities = 139/242 (57%), Positives = 139/242 (57%), Strand = Plus / Plus Query: 2783 TCTTTCTTTTTTTTTTTTTCCTTTTTCC-AGTTTTGTTTTTTTGAGACAGAGTTTC-T-C 2839 | ||| ||||||||||||| | | ||| | | | | ||| ||| | | | Sbjct: 1290 TTTTTGTTTTTTTTTTTTTTTTGAGACAGAGTCTGGCTCTGTTGCC-CAGGCTGGAGTGC 1348 Query: 2840 TGTGTAGCCCTAACTGC-C-CTGGAACTTGCTCTGTAGCCAGGCTTG-GCC-TTGAACTC 2895 ||| || | | || | ||| || | | | | || |||| ||| || || Sbjct: 1349 AGTGGTGCGATCTCGGCTCACTGCAAGCTCCGCC-TC-CCGGGCTCACGCCATTCTCCTG 1406 Query: 2896 AGAGATCCACCCTCCTGTG-AGTTCTGGGATTAAAAGGCATGTGCCACCACTTTGTGGC- 2953 | | | ||||| | | || | |||| || | || |||||||| | |||| Sbjct: 1407 CCTCAGC-AGCCTCCCGAGTAG--CAGGGACTATA-GGTGCCTGCCACCA-TGCCTGGCT 1461 Query: 2954 -AGCCAT-CGCTTTTTT-G-A-A-AC-AG-TAT-ACCATGTACTCCAGGCAGGCCTTAAA 3004 | | | |||||| | | | || || | | ||| ||| ||||| || || || Sbjct: 1462 AATTTTTTCTATTTTTTAGTAGAGACGAGGTTTCACCTTGTTAGCCAGGATGGTCTCAAT 1521 Query: 3005 CT 3006 || Sbjct: 1522 CT 1523 Parameters: ctxfactor=2.00 E=10 Query ----- As Used ----- ----- Computed ---- Strand MatID Matrix name Lambda K H Lambda K H +1 0 +5,-4 0.192 0.173 0.357 same same same Q=10,R=10 0.104 0.0151 0.0600 n/a n/a n/a -1 0 +5,-4 0.192 0.173 0.357 same same same Q=10,R=10 0.104 0.0151 0.0600 n/a n/a n/a Query Strand MatID Length Eff.Length E S W T X E2 S2 +1 0 5878 5878 10. 331 11 n/a 73 0.024 82 110 0.023 124 -1 0 5878 5878 10. 331 11 n/a 73 0.024 82 110 0.023 124 Statistics: Database: NM_005641 Title: NM_005641 Posted: 6:31:35 PM CET Dec 19, 2002 Created: 6:31:17 PM CET Dec 19, 2002 Format: XDF-1 # of letters in database: 52,737,903,427,583 # of sequences in database: 1 # of database sequences satisfying E: 1 No. of states in DFA: 256 (256 KB) Total size of DFA: 507 KB (2171 KB) Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00 No. of threads or processors used: 1 Search cpu time: 0.05u 0.00s 0.05t Elapsed: 00:00:00 Total cpu time: 0.07u 0.01s 0.08t Elapsed: 00:00:00 Start: Thu Dec 19 18:31:23 2002 End: Thu Dec 19 18:31:23 2002