Description:

Fixing the coordinates for predicted exons. Arrays and most processing in language C start in 0 to L-1, while positions of predictions in the real sequence ranges from 1 to L. Moreover, stop codons are included into the Terminal exons, Single Genes and ORFs.

Briefing:

void CorrectExon(exonGFF* e)

Increase/decrease positions (offset1, offset2) due to the C offset in the arrays. Include stop codon in Terminal exons and Single genes.

void CorrectORF(exonGFF* e)

Increase/decrease positions (offset1, offset2) due to the C offset in the arrays. Stop codon included.

Enrique Blanco Garcia © 2001