Gene extracted from human Chromosome 22 predictions (geneid format) |
# Gene 10 (Forward). 5 exons. 787 aa. Score = 39.466684 First 13358069 13358945 18.58 + 0 1 5.78 3.15 45.54 0.00 AA 1:293 gene_10 Internal 13359480 13359693 1.17 + 2 2 -2.83 0.56 18.82 0.00 AA 293:364 gene_10 Internal 13359779 13360175 4.51 + 1 0 0.30 -1.47 26.77 0.00 AA 364:496 gene_10 Internal 13368380 13368662 8.38 + 0 1 3.02 2.87 25.87 0.00 AA 497:591 gene_10 Terminal 13370754 13371343 6.83 + 2 0 6.09 0.00 21.71 0.00 AA 591:787 gene_10 >chr22|geneid_v1.1_predicted_protein_10|787_AA MALHSPQYIFGDFSPDEFNQFFVTPRSSVELPPCSGTVLCGTQAGDKLPDGQEYRRIEFG VNEVIEPSDTLLRTPSYSISSTLNPQAPEFILGCTASKTTPDGITKEASYGSIDQYPGCA LALDGSSSVEAEVLENDGVSGGLGQRERKKKKKQPPGYYSCLKDGGDDSISTEALVNGHA NSAVPNSVSAEDAEFMGDMPPSVTPRTFDSPQNSTDSVSDIVPDSPFPGALGSDTGTAGQ QEGGPGVDFGQSCFPAGAGRDTLSRTAGAQPCVGTDTTENLGVANGQILESSVNKSSLSE KDRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKRAISNGPKNQSMKKSKKNKVKEARM NGNKSVVYQQSAKESATLQPFFTLQLDIQSDKIRTVQDALESLVARESVQGYTTKTEQEV EKSRRVTLEKLPPVLVLHLKRFVYEKTGGARSLLNILWTWKLVKNCFLQGLKIRILNATE PIGSLQWSTITATVRRRSVPWLASESPGLPQRPPRPPAAPALTTGPDVPAAAAGSACAMG LPTLEFSDYYLDSPDFRERLQCHQIELERTNKFIKELIKDGSLLTGALRTEQNSTTKSAF CQPREKSGGIPWIATQSSNGQKSLGLWTTNPESSSREDATKTDAESDCQSVASVTSPGDV SPPIDLVKKGPYGLSGLKRASASSLRSISAAEGNISYSGSIQSLTSVGSKETPKASNPDL PPKMCRRLRLDTTSSNGYQRPGSVVAAKAQLFENVGSPKPVSSGHQAKAMYSYKGEHSVS FPSHKE* |
Description of columns (geneid format) | |
Type | Type of predicted exon: First, Internal, Terminal or Single |
Positions | Start and finish positions of current exon |
Score | Score (reliability) of this exon |
Strand | Reading sense: forward or reverse |
Frame | Left uncomplete codon length in this exon |
Remainder | Right uncomplete codon length in this exon |
Partial scores: |
Scores (log likelihood) from:
|
AA | Amino acids corresponding to the exon translation |
Key | Gene identifier |
Enrique Blanco Garcia © 2001