#-----Location of Executables Used by MAKER/EVALUATOR makeblastdb=/soft/bin/makeblastdb #location of NCBI+ makeblastdb executable blastn=/soft/bin/blastn #location of NCBI+ blastn executable blastx=/soft/bin/blastx #location of NCBI+ blastx executable tblastx=/soft/bin/tblastx #location of NCBI+ tblastx executable formatdb=/soft/bin/formatdb #location of NCBI formatdb executable blastall=/soft/bin/blastall #location of NCBI blastall executable xdformat=/soft/bin/xdformat #location of WUBLAST xdformat executable blasta=/soft/bin/blasta #location of WUBLAST blasta executable RepeatMasker=/soft/bin/RepeatMasker #location of RepeatMasker executable exonerate=/soft/bin/exonerate #location of exonerate executable #-----Ab-initio Gene Prediction Algorithms snap=#location of snap executable gmhmme3= #location of eukaryotic genemark executable gmhmmp= #location of prokaryotic genemark executable augustus= #location of augustus executable fgenesh= #location of fgenesh executable #-----Other Algorithms fathom= #location of fathom executable (experimental) probuild= #location of probuild executable (required for genemark)