## date Wed Nov 30 16:15:43 2005
## source-version: geneid v 1.2 -- geneid@imim.es
# Sequence chr2_random - Length = 125104 bps
# Optimal Gene Structure. 3 genes. Score = 221.55 
# Gene 1 (Reverse). 16 exons. 754 aa. Score = 128.92 
Internal    56873    57060	14.76	- 0 2	 2.68	 1.05	12.76	19.04	AA 692:754 chr2_random_1
Internal    58267    58427	11.27	- 2 0	 3.92	 3.42	 7.80	10.25	AA 638:691 chr2_random_1
Internal    59469    59490	-7.28	- 0 1	 1.35	 2.58	 0.95	-10.67	AA 631:638 chr2_random_1
Internal    60394    60584	13.85	- 2 0	 2.73	 1.50	15.35	-5.72	AA 567:630 chr2_random_1
Internal    60667    60841	 6.86	- 0 1	-0.04	 1.26	11.25	11.05	AA 509:567 chr2_random_1
Internal    62101    62290	14.56	- 1 0	 3.55	 4.45	15.42	-32.66	AA 445:508 chr2_random_1
Internal    64126    64240	 5.22	- 2 2	 2.56	 2.34	 8.00	-3.52	AA 407:445 chr2_random_1
Internal    64908    65016	 4.36	- 0 1	 1.55	 6.53	 3.62	-1.73	AA 371:407 chr2_random_1
Internal    65642    65866	23.18	- 0 0	 5.38	 3.35	13.70	19.34	AA 296:370 chr2_random_1
Internal    66352    66540	16.52	- 0 0	 0.41	 3.12	14.96	16.76	AA 233:295 chr2_random_1
Internal    67490    67628	12.37	- 1 0	 2.12	 3.47	10.45	10.90	AA 186:232 chr2_random_1
Internal    68094    68302	 6.12	- 0 2	 0.21	 4.73	13.88	-41.52	AA 117:186 chr2_random_1
Internal    81970    82035	 1.10	- 0 0	 2.73	 2.10	 9.02	-32.01	AA  95:116 chr2_random_1
Internal    83128    83265	 8.51	- 0 0	 2.20	 1.75	12.91	-14.07	AA  49: 94 chr2_random_1
Internal    85768    85906	 2.33	- 1 0	 2.92	 0.96	15.88	-67.42	AA   2: 48 chr2_random_1
   First    87717    87721	-4.81	- 0 2	-3.43	 7.82	 0.00	-2.42	AA   1:  2 chr2_random_1

>chr2_random_1|SGP_v1.0_predicted_cDNA_1|2261_NN
ATGTCTAACAAGAAAACAGATTCAGAAAGTAGTGCTGCGAAGAAAAAGGTTAACAAGGGA
AAGGAAGGTTCTGAAAACTCAGATTTGGATAAAACTCCACCACCTTCACCTCATCCTGAA
GATGAAGATGATCCAGGAGTTCAGAAGCGACGCTCCAGCAGGCAGGTGAAGAGGAAACGT
TATACGGAAGACTTGGAGTTCAAGATTTCAGATGAGGAGGCGGATGATGCTGATGCTGCT
GGAAGAGACTCTCCTTCAAATACTTCTCAGTCAGAGCAACAGGAGTCTGCTGATGCTGAA
GGTCCTGTTGTGGAGAAAATCATGAGTAGCCGCTCAGTCAAGAAAAAGGAGATAAGTTAC
AAGCACAGAGAGCTGCTGGAGCTGGATTCAGCTAACGTGAGCACGAGCTGCCTTGCCAGC
CTACAGCAGCCTGTAGGCATCCTTCTTCTGGAGCATGCCCTGATGGCACTGTCCCCTGCA
GAGGAGCCCCCATCAAAGCGGATGCGTGGCAGGACTGAGCTCCCCCCAGACGTCGTCAAA
TGGCTCGAGCTTGCTAAGCTTTACCGGTCTCTGGGAGATTATGATGTCCTTCGTGGTATT
TTCAGTGGTAAGATTGGGACTAAGGACATTACACAGCAAGCGTTGCTGGCAGAAGCAAGG
AGTGATTATGCTGAAGCAGCTAAATGTTATGATGAGGCACTCTCCAAAGAAGATTGGGAA
GACGGGGAGCCAACTGAAGCAGAGAAAGACTTCTGGGAACTTGCATCTCTGGAATGCTAT
GACCACCTCACAGAATGGAAGTCTCTGGAGTATTGTGCTACTGTTAATATTGACAGTGGT
AAACCTCCAGACCTGAACAAAACGTGGAGTGATCCATTTTATCAGGAGACGTATCTGCCC
TATATAATACGCAGTAAGTTGAAGCTACTGCTCAATGGGGAAAATGACCAGACTTTGCTG
ACTTTCATTGATGAGGCAATGAAGACAGAACAGAAGAAAGCTCTGATAGAGATGCATTAC
AGCCAAGAGCTTAGTCTCCTTTACATCCTGCAAGATGATTTTGACAGAGCTAAATACTAC
ATTGGCAACGGCATACAGATCTTCATGCAGAGCTATTCCAGTATAGATACTTTGTTATAC
CAAAGTCGAATGAGCAAACTGCAGTCTGTACAGGCTCTGACAGAAATACAGGATTTCATC
AATTTTATGACCAAAACAAGTAACATAGCTTCACAGGCTAAATCCCTGAAGAGACTTCTC
AGAACTTGGACGAGCAGATATCCAGATGCTAAAATGGATCCCATGAACATCTGGGATGAT
ATCATTACAAATCGGTGCTTCTTTCTTGACAAGCTGCAAGAGAAATTTCTCTGTGATAAG
GCCAATGATAGTATGGAGGTGGATGAAGAAAGTAGTGTTGGAGACCAAATGGAAGTAGAT
CAACAGGATGAAGACATTCACTCAATGATTAGAAGCTGCAAATTTAACATGAAACTGAAG
ATGATAGAAAGTGCCAGGAAACAGAACAGCTTCTCCATTGCCAAGAAGCTTCTGAAGGGC
CTGCGCAGAGAGGCCAAGACGAGGGAGGACTGGCTGGTGAGGTGGAACTATGCCTACTGC
CGCTTCGTGCACAGCTGCAGCCAGAGCCAGAGTTGTCCTGAACGAGTGCTCTCTGTGTTA
AAAACCATCTCCCTGCTTGAAGATACCAAGTCAGACTACCTTAACAAGAACATAATGGCC
TTCCGAAACCAGAATCTTCTGCTGGGTACTACGTACCACATCATGGCCAATGCTCTTAGT
CAGGATCCAAAATGCTGTGAGCAAATAGAGGAAGAAAAAACTGGAAAAATATTGGAACTG
TCAGGAGAAAGTTCTGAGAGTCCTGAAAAGGTGGATCAGACTGGGATATCAGAAATTAAT
GCTGCAGATCTGCAGCTATTCCCAGCTATTGTGGTGGAGAAAATGATAAAAGCTTTAAAA
CTGAACTCCAGAGAAGCCAGGCTGAGGTTTCCTCGACTGCTACAAATAATTGAAAGATAT
CCAGCGGAGACGCTGGGTCTGGTGACACGAGAGTTCATCGGTTGGATTAGCCAGATGATG
GCACTCCTTGACAAGGATGAGGCAGTGGCTGTGCAGCACACTGTGGAAGAGATCGTGGAT
ACCTACCCCCAGGCAATCATCTACCCGTTCACGATCAGCAGTGAGAGTTACTGCTTCAAA
GATACCGCAGCAGGCTGTAGGAACAAGGAGTTTGTAGCAAG

>chr2_random_1|SGP_v1.0_predicted_protein_1|754_AA
MSNKKTDSESSAAKKKVNKGKEGSENSDLDKTPPPSPHPEDEDDPGVQKRRSSRQVKRKR
YTEDLEFKISDEEADDADAAGRDSPSNTSQSEQQESADAEGPVVEKIMSSRSVKKKEISY
KHRELLELDSANVSTSCLASLQQPVGILLLEHALMALSPAEEPPSKRMRGRTELPPDVVK
WLELAKLYRSLGDYDVLRGIFSGKIGTKDITQQALLAEARSDYAEAAKCYDEALSKEDWE
DGEPTEAEKDFWELASLECYDHLTEWKSLEYCATVNIDSGKPPDLNKTWSDPFYQETYLP
YIIRSKLKLLLNGENDQTLLTFIDEAMKTEQKKALIEMHYSQELSLLYILQDDFDRAKYY
IGNGIQIFMQSYSSIDTLLYQSRMSKLQSVQALTEIQDFINFMTKTSNIASQAKSLKRLL
RTWTSRYPDAKMDPMNIWDDIITNRCFFLDKLQEKFLCDKANDSMEVDEESSVGDQMEVD
QQDEDIHSMIRSCKFNMKLKMIESARKQNSFSIAKKLLKGLRREAKTREDWLVRWNYAYC
RFVHSCSQSQSCPERVLSVLKTISLLEDTKSDYLNKNIMAFRNQNLLLGTTYHIMANALS
QDPKCCEQIEEEKTGKILELSGESSESPEKVDQTGISEINAADLQLFPAIVVEKMIKALK
LNSREARLRFPRLLQIIERYPAETLGLVTREFIGWISQMMALLDKDEAVAVQHTVEEIVD
TYPQAIIYPFTISSESYCFKDTAAGCRNKEFVAag

# Gene 2 (Reverse). 1 exons. 67 aa. Score = 10.33 
  Single   102026   102226	10.33	- 0 0	 0.00	-0.54	14.07	22.95	AA   1: 67 chr2_random_2

>chr2_random_2|SGP_v1.0_predicted_cDNA_2|201_NN
ATGAGCAATTCAGATGTGATGGTTGCTCTTCAGCGGGGGTACCGAATGCCACGTATGGAA
ACCTGTCCAGCTGAGCTTTATGATATCATGAAAACATGCTGGAAAGACAAAGCAGAAGAA
AGGCCGACCTTTGATTACCTACAGAGCGTACTTGATGATTTCTACACAGCAACAGAAGGG
CAATATCAACAGCAGCCATAG

>chr2_random_2|SGP_v1.0_predicted_protein_2|67_AA
MSNSDVMVALQRGYRMPRMETCPAELYDIMKTCWKDKAEERPTFDYLQSVLDDFYTATEG
QYQQQP*

# Gene 3 (Reverse). 2 exons. 214 aa. Score = 82.30 
Terminal   124153   124403	25.82	- 2 0	 0.00	 5.97	15.22	41.68	AA 131:214 chr2_random_3
Internal   124710   125100	56.48	- 0 1	 3.39	 0.58	38.30	52.52	AA   1:131 chr2_random_3

>chr2_random_3|SGP_v1.0_predicted_cDNA_3|642_NN
GCTGTGCTGTCCCTGTATGCCTCTGGTCGTACCACTGGTATTGTGATGGACTCTGGTGAT
GGTGTTACCCACACTGTGCCCATCTATGAAGGCTACGCCCTCCCCCACGCCATCCTCCGT
CTGGATCTGGCTGGCCGTGACCTGACGGACTACCTCATGAAGATCCTGACAAAGAGAGGC
TACAGCTTCACCACCACAGCCGAGAGAGAAATTGTGCGTGACATCAAGGAGAAGCTGTGC
TACGTCTCACTGGATTTCGAGCAGGAGATGGCCACAGCTGCCTCTAGCTCTTCCCTGGAG
AAGAGCTATGAACTCCCTGATGGTCAGGTCATCACCATTGGCAATGAGAGGTTCAGGTGC
CCCGAGGCCCTCTTCCAGCCATCTTTCTTGGGTATGGAGTCCTGTGGTATCCATGAAACT
ACCTTCAACTCCATCATGAAGTGTGATGTGGATATCCGTAAGGATCTGTATGCCAACACA
GTGCTGTCTGGTGGTACCACAATGTACCCTGGCATTGCTGACAGGATGCAGAAGGAGATC
ACAGCCCTGGCACCTAGCACAATGAAAATCAAGGCCGGCTGGAGCCCTGGGCTGCTCTTA
GCACACCTCTTAACGCTGAGTGGGTGGAGGAGGCCGAGCTAA

>chr2_random_3|SGP_v1.0_predicted_protein_3|214_AA
AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTKRG
YSFTTTAEREIVRDIKEKLCYVSLDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRC
PEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI
TALAPSTMKIKAGWSPGLLLAHLLTLSGWRRPS*