## date Mon May 10 18:11:49 2004 ## source-version: geneid v 1.2 -- geneid@imim.es # Sequence chr2_random - Length = 125104 bps # Optimal Gene Structure. 3 genes. Score = 545.16 # Gene 1 (Reverse). 16 exons. 823 aa. Score = 353.99 Internal 56873 57084 35.47 - 0 2 2.68 0.99 11.90 134.72 AA 753:823 chr2_random_1 Internal 58267 58427 24.61 - 2 0 3.92 3.42 7.80 80.45 AA 699:752 chr2_random_1 Internal 58951 59131 18.28 - 0 1 0.33 2.87 10.43 61.25 AA 639:699 chr2_random_1 Internal 60394 60584 27.62 - 2 0 2.73 1.50 15.35 66.78 AA 575:638 chr2_random_1 Internal 60667 60841 -5.21 - 0 1 -0.04 1.26 11.25 -52.50 AA 517:575 chr2_random_1 Internal 62101 62290 38.95 - 1 0 3.55 4.45 15.42 95.75 AA 453:516 chr2_random_1 Internal 64126 64240 18.56 - 2 2 2.56 2.34 8.00 66.66 AA 415:453 chr2_random_1 Internal 64908 65016 15.94 - 0 1 1.55 6.53 3.62 59.22 AA 379:415 chr2_random_1 Internal 65642 65866 38.85 - 0 0 5.38 3.35 13.70 101.84 AA 304:378 chr2_random_1 Internal 66352 66540 39.84 - 0 0 0.41 3.12 14.96 139.49 AA 241:303 chr2_random_1 Internal 67490 67628 26.62 - 1 0 2.12 3.47 10.45 85.89 AA 194:240 chr2_random_1 Internal 68094 68302 27.69 - 0 2 0.21 4.73 13.88 72.04 AA 125:194 chr2_random_1 Internal 81970 82035 16.03 - 0 0 2.73 2.10 9.02 46.58 AA 103:124 chr2_random_1 Internal 83104 83265 17.94 - 0 0 1.02 1.75 12.80 45.76 AA 49:102 chr2_random_1 Internal 85768 85906 17.42 - 1 0 2.92 0.96 15.88 12.01 AA 2: 48 chr2_random_1 First 87717 87721 -4.63 - 0 2 -3.43 7.82 0.00 -1.50 AA 1: 2 chr2_random_1 >chr2_random_1|SGP_v1.0_(Ggal)_predicted_cDNA_1|2468_NN ATGTCTAACAAGAAAACAGATTCAGAAAGTAGTGCTGCGAAGAAAAAGGTTAACAAGGGA AAGGAAGGTTCTGAAAACTCAGATTTGGATAAAACTCCACCACCTTCACCTCATCCTGAA GATGAAGATGATCCAGGAGTTCAGAAGCGACGCTCCAGCAGGCAGGTGAAGAGGAAACGT TATACGGAAGACTTGGAGTTCAAGATTTCAGATGAGGAGGCGGATGATGCTGATGCTGCT GGAAGAGACTCTCCTTCAAATACTTCTCAGTCAGAGCAACAGGTCAGATTTGAATGGAGT GGAAAGGAGTCTGCTGATGCTGAAGGTCCTGTTGTGGAGAAAATCATGAGTAGCCGCTCA GTCAAGAAAAAGGAGATAAGTTACAAGCACAGAGAGCTGCTGGAGCTGGATTCAGCTAAC GTGAGCACGAGCTGCCTTGCCAGCCTACAGCAGCCTGTAGGCATCCTTCTTCTGGAGCAT GCCCTGATGGCACTGTCCCCTGCAGAGGAGCCCCCATCAAAGCGGATGCGTGGCAGGACT GAGCTCCCCCCAGACGTCGTCAAATGGCTCGAGCTTGCTAAGCTTTACCGGTCTCTGGGA GATTATGATGTCCTTCGTGGTATTTTCAGTGGTAAGATTGGGACTAAGGACATTACACAG CAAGCGTTGCTGGCAGAAGCAAGGAGTGATTATGCTGAAGCAGCTAAATGTTATGATGAG GCACTCTCCAAAGAAGATTGGGAAGACGGGGAGCCAACTGAAGCAGAGAAAGACTTCTGG GAACTTGCATCTCTGGAATGCTATGACCACCTCACAGAATGGAAGTCTCTGGAGTATTGT GCTACTGTTAATATTGACAGTGGTAAACCTCCAGACCTGAACAAAACGTGGAGTGATCCA TTTTATCAGGAGACGTATCTGCCCTATATAATACGCAGTAAGTTGAAGCTACTGCTCAAT GGGGAAAATGACCAGACTTTGCTGACTTTCATTGATGAGGCAATGAAGACAGAACAGAAG AAAGCTCTGATAGAGATGCATTACAGCCAAGAGCTTAGTCTCCTTTACATCCTGCAAGAT GATTTTGACAGAGCTAAATACTACATTGGCAACGGCATACAGATCTTCATGCAGAGCTAT TCCAGTATAGATACTTTGTTATACCAAAGTCGAATGAGCAAACTGCAGTCTGTACAGGCT CTGACAGAAATACAGGATTTCATCAATTTTATGACCAAAACAAGTAACATAGCTTCACAG GCTAAATCCCTGAAGAGACTTCTCAGAACTTGGACGAGCAGATATCCAGATGCTAAAATG GATCCCATGAACATCTGGGATGATATCATTACAAATCGGTGCTTCTTTCTTGACAAGCTG CAAGAGAAATTTCTCTGTGATAAGGCCAATGATAGTATGGAGGTGGATGAAGAAAGTAGT GTTGGAGACCAAATGGAAGTAGATCAACAGGATGAAGACATTCACTCAATGATTAGAAGC TGCAAATTTAACATGAAACTGAAGATGATAGAAAGTGCCAGGAAACAGAACAGCTTCTCC ATTGCCAAGAAGCTTCTGAAGGGCCTGCGCAGAGAGGCCAAGACGAGGGAGGACTGGCTG GTGAGGTGGAACTATGCCTACTGCCGCTTCGTGCACAGCTGCAGCCAGAGCCAGAGTTGT CCTGAACGAGTGCTCTCTGTGTTAAAAACCATCTCCCTGCTTGAAGATACCAAGTCAGAC TACCTTAACAAGAACATAATGGCCTTCCGAAACCAGAATCTTCTGCTGGGTACTACGTAC CACATCATGGCCAATGCTCTTAGTCAGGATCCAAAATGCTGTGAGCAAATAGAGGAAGAA AAAACTGGAAAAATATTGGAACTGTCAGGAGAAAGTTCTGAGAGTCCTGAAAAGATATTA GCAGGTCTGAACAAGAGAGCTTTTCAGTGTTTCAGCAGCGCTGCGAGGAAGTCTGAAGAG GAAGTGCAGTCCCTCTCCATGGAACACGTTGATGTGAAGGGAGTTATCGATGCGTATATG ACTTTGGTTGGTTTCTGTGACCAACACCTGCGAAAGGAAGAAGAAGGCTCACTTGAAATT AATGCTGCAGATCTGCAGCTATTCCCAGCTATTGTGGTGGAGAAAATGATAAAAGCTTTA AAACTGAACTCCAGAGAAGCCAGGCTGAGGTTTCCTCGACTGCTACAAATAATTGAAAGA TATCCAGCGGAGACGCTGGGTCTGGTGACACGAGAGCTTCCTTCAGTTCCCTGCTGGCAG TTCATCGGTTGGATTAGCCAGATGATGGCACTCCTTGACAAGGATGAGGCAGTGGCTGTG CAGCACACTGTGGAAGAGATCGTGGATACCTACCCCCAGGCAATCATCTACCCGTTCACG ATCAGCAGTGAGAGTTACTGCTTCAAAGATACCGCAGCAGGCTGTAGGAACAAGGAGTTT GTAGCAAG >chr2_random_1|SGP_v1.0_(Ggal)_predicted_protein_1|823_AA MSNKKTDSESSAAKKKVNKGKEGSENSDLDKTPPPSPHPEDEDDPGVQKRRSSRQVKRKR YTEDLEFKISDEEADDADAAGRDSPSNTSQSEQQVRFEWSGKESADAEGPVVEKIMSSRS VKKKEISYKHRELLELDSANVSTSCLASLQQPVGILLLEHALMALSPAEEPPSKRMRGRT ELPPDVVKWLELAKLYRSLGDYDVLRGIFSGKIGTKDITQQALLAEARSDYAEAAKCYDE ALSKEDWEDGEPTEAEKDFWELASLECYDHLTEWKSLEYCATVNIDSGKPPDLNKTWSDP FYQETYLPYIIRSKLKLLLNGENDQTLLTFIDEAMKTEQKKALIEMHYSQELSLLYILQD DFDRAKYYIGNGIQIFMQSYSSIDTLLYQSRMSKLQSVQALTEIQDFINFMTKTSNIASQ AKSLKRLLRTWTSRYPDAKMDPMNIWDDIITNRCFFLDKLQEKFLCDKANDSMEVDEESS VGDQMEVDQQDEDIHSMIRSCKFNMKLKMIESARKQNSFSIAKKLLKGLRREAKTREDWL VRWNYAYCRFVHSCSQSQSCPERVLSVLKTISLLEDTKSDYLNKNIMAFRNQNLLLGTTY HIMANALSQDPKCCEQIEEEKTGKILELSGESSESPEKILAGLNKRAFQCFSSAARKSEE EVQSLSMEHVDVKGVIDAYMTLVGFCDQHLRKEEEGSLEINAADLQLFPAIVVEKMIKAL KLNSREARLRFPRLLQIIERYPAETLGLVTRELPSVPCWQFIGWISQMMALLDKDEAVAV QHTVEEIVDTYPQAIIYPFTISSESYCFKDTAAGCRNKEFVAag # Gene 2 (Reverse). 1 exons. 67 aa. Score = 33.45 Single 102026 102226 33.45 - 0 0 0.00 -0.54 14.07 144.61 AA 1: 67 chr2_random_2 >chr2_random_2|SGP_v1.0_(Ggal)_predicted_cDNA_2|201_NN ATGAGCAATTCAGATGTGATGGTTGCTCTTCAGCGGGGGTACCGAATGCCACGTATGGAA ACCTGTCCAGCTGAGCTTTATGATATCATGAAAACATGCTGGAAAGACAAAGCAGAAGAA AGGCCGACCTTTGATTACCTACAGAGCGTACTTGATGATTTCTACACAGCAACAGAAGGG CAATATCAACAGCAGCCATAG >chr2_random_2|SGP_v1.0_(Ggal)_predicted_protein_2|67_AA MSNSDVMVALQRGYRMPRMETCPAELYDIMKTCWKDKAEERPTFDYLQSVLDDFYTATEG QYQQQP* # Gene 3 (Reverse). 2 exons. 214 aa. Score = 157.73 Terminal 124153 124403 52.70 - 2 0 0.00 5.97 15.22 183.12 AA 131:214 chr2_random_3 Internal 124710 125100 105.04 - 0 1 3.39 0.58 38.30 308.08 AA 1:131 chr2_random_3 >chr2_random_3|SGP_v1.0_(Ggal)_predicted_cDNA_3|642_NN GCTGTGCTGTCCCTGTATGCCTCTGGTCGTACCACTGGTATTGTGATGGACTCTGGTGAT GGTGTTACCCACACTGTGCCCATCTATGAAGGCTACGCCCTCCCCCACGCCATCCTCCGT CTGGATCTGGCTGGCCGTGACCTGACGGACTACCTCATGAAGATCCTGACAAAGAGAGGC TACAGCTTCACCACCACAGCCGAGAGAGAAATTGTGCGTGACATCAAGGAGAAGCTGTGC TACGTCTCACTGGATTTCGAGCAGGAGATGGCCACAGCTGCCTCTAGCTCTTCCCTGGAG AAGAGCTATGAACTCCCTGATGGTCAGGTCATCACCATTGGCAATGAGAGGTTCAGGTGC CCCGAGGCCCTCTTCCAGCCATCTTTCTTGGGTATGGAGTCCTGTGGTATCCATGAAACT ACCTTCAACTCCATCATGAAGTGTGATGTGGATATCCGTAAGGATCTGTATGCCAACACA GTGCTGTCTGGTGGTACCACAATGTACCCTGGCATTGCTGACAGGATGCAGAAGGAGATC ACAGCCCTGGCACCTAGCACAATGAAAATCAAGGCCGGCTGGAGCCCTGGGCTGCTCTTA GCACACCTCTTAACGCTGAGTGGGTGGAGGAGGCCGAGCTAA >chr2_random_3|SGP_v1.0_(Ggal)_predicted_protein_3|214_AA AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTKRG YSFTTTAEREIVRDIKEKLCYVSLDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRC PEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI TALAPSTMKIKAGWSPGLLLAHLLTLSGWRRPS*