## date Fri Nov 18 16:51:17 2005 ## source-version: geneid v 1.2 -- geneid@imim.es # Sequence chr2_random - Length = 125104 bps # Optimal Gene Structure. 3 genes. Score = 232.20 # Gene 1 (Reverse). 16 exons. 807 aa. Score = 138.61 Internal 56873 57060 14.76 - 0 2 2.68 1.05 12.76 19.04 AA 745:807 chr2_random_1 Internal 58267 58427 11.31 - 2 0 3.92 3.42 7.80 10.45 AA 691:744 chr2_random_1 Internal 58951 59131 -6.60 - 0 1 0.33 2.87 10.43 -69.68 AA 631:691 chr2_random_1 Internal 60394 60584 14.23 - 2 0 2.73 1.50 15.35 -3.72 AA 567:630 chr2_random_1 Internal 60667 60841 6.86 - 0 1 -0.04 1.26 11.25 11.05 AA 509:567 chr2_random_1 Internal 62101 62290 16.00 - 1 0 3.55 4.45 15.42 -25.06 AA 445:508 chr2_random_1 Internal 64126 64240 5.72 - 2 2 2.56 2.34 8.00 -0.92 AA 407:445 chr2_random_1 Internal 64908 65016 4.59 - 0 1 1.55 6.53 3.62 -0.53 AA 371:407 chr2_random_1 Internal 65642 65866 23.18 - 0 0 5.38 3.35 13.70 19.34 AA 296:370 chr2_random_1 Internal 66352 66540 16.52 - 0 0 0.41 3.12 14.96 16.76 AA 233:295 chr2_random_1 Internal 67490 67628 12.37 - 1 0 2.12 3.47 10.45 10.90 AA 186:232 chr2_random_1 Internal 68094 68302 7.86 - 0 2 0.21 4.73 13.88 -32.32 AA 117:186 chr2_random_1 Internal 81970 82035 2.35 - 0 0 2.73 2.10 9.02 -25.41 AA 95:116 chr2_random_1 Internal 83128 83265 9.19 - 0 0 2.20 1.75 12.91 -10.47 AA 49: 94 chr2_random_1 Internal 85768 85906 4.97 - 1 0 2.92 0.96 15.88 -53.52 AA 2: 48 chr2_random_1 First 87717 87721 -4.72 - 0 2 -3.43 7.82 0.00 -1.93 AA 1: 2 chr2_random_1 >chr2_random_1|SGP_v1.0_predicted_cDNA_1|2420_NN ATGTCTAACAAGAAAACAGATTCAGAAAGTAGTGCTGCGAAGAAAAAGGTTAACAAGGGA AAGGAAGGTTCTGAAAACTCAGATTTGGATAAAACTCCACCACCTTCACCTCATCCTGAA GATGAAGATGATCCAGGAGTTCAGAAGCGACGCTCCAGCAGGCAGGTGAAGAGGAAACGT TATACGGAAGACTTGGAGTTCAAGATTTCAGATGAGGAGGCGGATGATGCTGATGCTGCT GGAAGAGACTCTCCTTCAAATACTTCTCAGTCAGAGCAACAGGAGTCTGCTGATGCTGAA GGTCCTGTTGTGGAGAAAATCATGAGTAGCCGCTCAGTCAAGAAAAAGGAGATAAGTTAC AAGCACAGAGAGCTGCTGGAGCTGGATTCAGCTAACGTGAGCACGAGCTGCCTTGCCAGC CTACAGCAGCCTGTAGGCATCCTTCTTCTGGAGCATGCCCTGATGGCACTGTCCCCTGCA GAGGAGCCCCCATCAAAGCGGATGCGTGGCAGGACTGAGCTCCCCCCAGACGTCGTCAAA TGGCTCGAGCTTGCTAAGCTTTACCGGTCTCTGGGAGATTATGATGTCCTTCGTGGTATT TTCAGTGGTAAGATTGGGACTAAGGACATTACACAGCAAGCGTTGCTGGCAGAAGCAAGG AGTGATTATGCTGAAGCAGCTAAATGTTATGATGAGGCACTCTCCAAAGAAGATTGGGAA GACGGGGAGCCAACTGAAGCAGAGAAAGACTTCTGGGAACTTGCATCTCTGGAATGCTAT GACCACCTCACAGAATGGAAGTCTCTGGAGTATTGTGCTACTGTTAATATTGACAGTGGT AAACCTCCAGACCTGAACAAAACGTGGAGTGATCCATTTTATCAGGAGACGTATCTGCCC TATATAATACGCAGTAAGTTGAAGCTACTGCTCAATGGGGAAAATGACCAGACTTTGCTG ACTTTCATTGATGAGGCAATGAAGACAGAACAGAAGAAAGCTCTGATAGAGATGCATTAC AGCCAAGAGCTTAGTCTCCTTTACATCCTGCAAGATGATTTTGACAGAGCTAAATACTAC ATTGGCAACGGCATACAGATCTTCATGCAGAGCTATTCCAGTATAGATACTTTGTTATAC CAAAGTCGAATGAGCAAACTGCAGTCTGTACAGGCTCTGACAGAAATACAGGATTTCATC AATTTTATGACCAAAACAAGTAACATAGCTTCACAGGCTAAATCCCTGAAGAGACTTCTC AGAACTTGGACGAGCAGATATCCAGATGCTAAAATGGATCCCATGAACATCTGGGATGAT ATCATTACAAATCGGTGCTTCTTTCTTGACAAGCTGCAAGAGAAATTTCTCTGTGATAAG GCCAATGATAGTATGGAGGTGGATGAAGAAAGTAGTGTTGGAGACCAAATGGAAGTAGAT CAACAGGATGAAGACATTCACTCAATGATTAGAAGCTGCAAATTTAACATGAAACTGAAG ATGATAGAAAGTGCCAGGAAACAGAACAGCTTCTCCATTGCCAAGAAGCTTCTGAAGGGC CTGCGCAGAGAGGCCAAGACGAGGGAGGACTGGCTGGTGAGGTGGAACTATGCCTACTGC CGCTTCGTGCACAGCTGCAGCCAGAGCCAGAGTTGTCCTGAACGAGTGCTCTCTGTGTTA AAAACCATCTCCCTGCTTGAAGATACCAAGTCAGACTACCTTAACAAGAACATAATGGCC TTCCGAAACCAGAATCTTCTGCTGGGTACTACGTACCACATCATGGCCAATGCTCTTAGT CAGGATCCAAAATGCTGTGAGCAAATAGAGGAAGAAAAAACTGGAAAAATATTGGAACTG TCAGGAGAAAGTTCTGAGAGTCCTGAAAAGATATTAGCAGGTCTGAACAAGAGAGCTTTT CAGTGTTTCAGCAGCGCTGCGAGGAAGTCTGAAGAGGAAGTGCAGTCCCTCTCCATGGAA CACGTTGATGTGAAGGGAGTTATCGATGCGTATATGACTTTGGTTGGTTTCTGTGACCAA CACCTGCGAAAGGAAGAAGAAGGCTCACTTGAAATTAATGCTGCAGATCTGCAGCTATTC CCAGCTATTGTGGTGGAGAAAATGATAAAAGCTTTAAAACTGAACTCCAGAGAAGCCAGG CTGAGGTTTCCTCGACTGCTACAAATAATTGAAAGATATCCAGCGGAGACGCTGGGTCTG GTGACACGAGAGTTCATCGGTTGGATTAGCCAGATGATGGCACTCCTTGACAAGGATGAG GCAGTGGCTGTGCAGCACACTGTGGAAGAGATCGTGGATACCTACCCCCAGGCAATCATC TACCCGTTCACGATCAGCAGTGAGAGTTACTGCTTCAAAGATACCGCAGCAGGCTGTAGG AACAAGGAGTTTGTAGCAAG >chr2_random_1|SGP_v1.0_predicted_protein_1|807_AA MSNKKTDSESSAAKKKVNKGKEGSENSDLDKTPPPSPHPEDEDDPGVQKRRSSRQVKRKR YTEDLEFKISDEEADDADAAGRDSPSNTSQSEQQESADAEGPVVEKIMSSRSVKKKEISY KHRELLELDSANVSTSCLASLQQPVGILLLEHALMALSPAEEPPSKRMRGRTELPPDVVK WLELAKLYRSLGDYDVLRGIFSGKIGTKDITQQALLAEARSDYAEAAKCYDEALSKEDWE DGEPTEAEKDFWELASLECYDHLTEWKSLEYCATVNIDSGKPPDLNKTWSDPFYQETYLP YIIRSKLKLLLNGENDQTLLTFIDEAMKTEQKKALIEMHYSQELSLLYILQDDFDRAKYY IGNGIQIFMQSYSSIDTLLYQSRMSKLQSVQALTEIQDFINFMTKTSNIASQAKSLKRLL RTWTSRYPDAKMDPMNIWDDIITNRCFFLDKLQEKFLCDKANDSMEVDEESSVGDQMEVD QQDEDIHSMIRSCKFNMKLKMIESARKQNSFSIAKKLLKGLRREAKTREDWLVRWNYAYC RFVHSCSQSQSCPERVLSVLKTISLLEDTKSDYLNKNIMAFRNQNLLLGTTYHIMANALS QDPKCCEQIEEEKTGKILELSGESSESPEKILAGLNKRAFQCFSSAARKSEEEVQSLSME HVDVKGVIDAYMTLVGFCDQHLRKEEEGSLEINAADLQLFPAIVVEKMIKALKLNSREAR LRFPRLLQIIERYPAETLGLVTREFIGWISQMMALLDKDEAVAVQHTVEEIVDTYPQAII YPFTISSESYCFKDTAAGCRNKEFVAag # Gene 2 (Reverse). 1 exons. 67 aa. Score = 10.33 Single 102026 102226 10.33 - 0 0 0.00 -0.54 14.07 22.95 AA 1: 67 chr2_random_2 >chr2_random_2|SGP_v1.0_predicted_cDNA_2|201_NN ATGAGCAATTCAGATGTGATGGTTGCTCTTCAGCGGGGGTACCGAATGCCACGTATGGAA ACCTGTCCAGCTGAGCTTTATGATATCATGAAAACATGCTGGAAAGACAAAGCAGAAGAA AGGCCGACCTTTGATTACCTACAGAGCGTACTTGATGATTTCTACACAGCAACAGAAGGG CAATATCAACAGCAGCCATAG >chr2_random_2|SGP_v1.0_predicted_protein_2|67_AA MSNSDVMVALQRGYRMPRMETCPAELYDIMKTCWKDKAEERPTFDYLQSVLDDFYTATEG QYQQQP* # Gene 3 (Reverse). 2 exons. 214 aa. Score = 83.27 Terminal 124153 124403 26.79 - 2 0 0.00 5.97 15.22 46.78 AA 131:214 chr2_random_3 Internal 124710 125100 56.48 - 0 1 3.39 0.58 38.30 52.52 AA 1:131 chr2_random_3 >chr2_random_3|SGP_v1.0_predicted_cDNA_3|642_NN GCTGTGCTGTCCCTGTATGCCTCTGGTCGTACCACTGGTATTGTGATGGACTCTGGTGAT GGTGTTACCCACACTGTGCCCATCTATGAAGGCTACGCCCTCCCCCACGCCATCCTCCGT CTGGATCTGGCTGGCCGTGACCTGACGGACTACCTCATGAAGATCCTGACAAAGAGAGGC TACAGCTTCACCACCACAGCCGAGAGAGAAATTGTGCGTGACATCAAGGAGAAGCTGTGC TACGTCTCACTGGATTTCGAGCAGGAGATGGCCACAGCTGCCTCTAGCTCTTCCCTGGAG AAGAGCTATGAACTCCCTGATGGTCAGGTCATCACCATTGGCAATGAGAGGTTCAGGTGC CCCGAGGCCCTCTTCCAGCCATCTTTCTTGGGTATGGAGTCCTGTGGTATCCATGAAACT ACCTTCAACTCCATCATGAAGTGTGATGTGGATATCCGTAAGGATCTGTATGCCAACACA GTGCTGTCTGGTGGTACCACAATGTACCCTGGCATTGCTGACAGGATGCAGAAGGAGATC ACAGCCCTGGCACCTAGCACAATGAAAATCAAGGCCGGCTGGAGCCCTGGGCTGCTCTTA GCACACCTCTTAACGCTGAGTGGGTGGAGGAGGCCGAGCTAA >chr2_random_3|SGP_v1.0_predicted_protein_3|214_AA AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTKRG YSFTTTAEREIVRDIKEKLCYVSLDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRC PEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI TALAPSTMKIKAGWSPGLLLAHLLTLSGWRRPS*