To build a model or representation of the family of binding sites that are known to associate a given TF, it is very common to put together the examples, then align them and finally create a weight matrix or a sequence logo to detect the conserved positions.

With ABS, the users can retrieve the set of motifs annotated as binding sites for a certain TF.



Additionally, the sites can be grouped by species to detect conservations that are specific of
some species.



The output consists of three parts:

I. The binding sites of ABS associated to this TF (of this species)
-> There is a link to access directly the gene entry in which each binding site is annotated
II. The alignment of the sites
III. The sequence logo

• To explore the ABS database follow this link



• To obtain the list of TFBSs of a given TF follow this link