mm6_refGene_NM_009242 MatScan NF-1 10 15 0.89 - . # CATGGC mm6_refGene_NM_009242 MatScan CP2 12 19 0.87 + . # CATGCCAG mm6_refGene_NM_009242 MatScan CREMtau1 14 20 0.88 + . # TGCCAGC mm6_refGene_NM_009242 MatScan CREMtau 14 20 0.88 + . # TGCCAGC mm6_refGene_NM_009242 MatScan CREMtau2 14 20 0.88 + . # TGCCAGC mm6_refGene_NM_009242 MatScan CREMtaualpha 14 20 0.88 + . # TGCCAGC mm6_refGene_NM_009242 MatScan NF-1 15 20 0.97 - . # GCTGGC mm6_refGene_NM_009242 MatScan MTF-1 17 28 0.89 - . # GAGTGCACGCTG mm6_refGene_NM_009242 MatScan XPF-1 28 36 0.86 - . # AAGGCAGAG mm6_refGene_NM_009242 MatScan DBP 33 37 1.00 - . # CAAGG mm6_refGene_NM_009242 MatScan C/EBPalpha 35 37 1.00 - . # CAA mm6_refGene_NM_009242 MatScan C/EBPbeta 35 37 1.00 - . # CAA mm6_refGene_NM_009242 MatScan C/EBPbeta 37 41 0.91 - . # ACAGC mm6_refGene_NM_009242 MatScan CREMtau1 37 43 0.88 - . # GTACAGC mm6_refGene_NM_009242 MatScan CREMtau2 37 43 0.88 - . # GTACAGC mm6_refGene_NM_009242 MatScan CREMtau 37 43 0.88 - . # GTACAGC mm6_refGene_NM_009242 MatScan CREMtaualpha 37 43 0.88 - . # GTACAGC mm6_refGene_NM_009242 MatScan c-Fos 39 41 1.00 - . # ACA mm6_refGene_NM_009242 MatScan GR 39 43 0.91 - . # GTACA mm6_refGene_NM_009242 MatScan GR 40 44 0.91 + . # GTACA mm6_refGene_NM_009242 MatScan C/EBPbeta 42 46 1.00 + . # ACATT mm6_refGene_NM_009242 MatScan c-Fos 42 44 1.00 + . # ACA mm6_refGene_NM_009242 MatScan DBP 43 47 1.00 - . # CAATG mm6_refGene_NM_009242 MatScan C/EBPdelta 44 46 1.00 + . # ATT mm6_refGene_NM_009242 MatScan C/EBPalpha 45 47 1.00 - . # CAA mm6_refGene_NM_009242 MatScan C/EBPbeta 45 47 1.00 - . # CAA mm6_refGene_NM_009242 MatScan TTF-1 53 58 0.94 + . # CCCAAG mm6_refGene_NM_009242 MatScan TTF-1 54 61 0.92 + . # CCAAGAGA mm6_refGene_NM_009242 MatScan C/EBPalpha 55 57 1.00 + . # CAA mm6_refGene_NM_009242 MatScan C/EBPbeta 55 57 1.00 + . # CAA mm6_refGene_NM_009242 MatScan DBP 55 59 0.96 + . # CAAGA mm6_refGene_NM_009242 MatScan c-Jun 65 68 0.96 - . # TGAG mm6_refGene_NM_009242 MatScan AP-2 69 76 0.89 - . # AACTTGCC mm6_refGene_NM_009242 MatScan TTF-1 69 74 0.86 + . # GGCAAG mm6_refGene_NM_009242 MatScan C/EBPalpha 71 73 1.00 + . # CAA mm6_refGene_NM_009242 MatScan C/EBPbeta 71 73 1.00 + . # CAA mm6_refGene_NM_009242 MatScan DBP 71 75 0.91 + . # CAAGT mm6_refGene_NM_009242 MatScan GR 71 77 0.88 - . # GAACTTG mm6_refGene_NM_009242 MatScan RXR-alpha 73 78 1.00 + . # AGTTCA mm6_refGene_NM_009242 MatScan c-Jun 75 78 1.00 - . # TGAA mm6_refGene_NM_009242 MatScan CREMtau1 82 88 0.88 - . # AGCCAGC mm6_refGene_NM_009242 MatScan CREMtau2 82 88 0.88 - . # AGCCAGC mm6_refGene_NM_009242 MatScan CREMtau 82 88 0.88 - . # AGCCAGC mm6_refGene_NM_009242 MatScan CREMtaualpha 82 88 0.88 - . # AGCCAGC mm6_refGene_NM_009242 MatScan NF-1 82 87 0.97 + . # GCTGGC mm6_refGene_NM_009242 MatScan C/EBPbeta 86 90 0.91 - . # ACAGC mm6_refGene_NM_009242 MatScan MTF-1 87 98 0.89 - . # CTTTACACACAG mm6_refGene_NM_009242 MatScan c-Fos 88 90 1.00 - . # ACA mm6_refGene_NM_009242 MatScan c-Fos 90 92 1.00 - . # ACA mm6_refGene_NM_009242 MatScan c-Fos 92 94 1.00 - . # ACA mm6_refGene_NM_009242 MatScan T3R-alpha 98 104 0.86 - . # GTCCTAC mm6_refGene_NM_009242 MatScan GR 101 105 1.00 + . # GGACA mm6_refGene_NM_009242 MatScan TTF-1 102 107 0.90 + . # GACAAG mm6_refGene_NM_009242 MatScan C/EBPbeta 103 107 0.88 + . # ACAAG mm6_refGene_NM_009242 MatScan c-Fos 103 105 1.00 + . # ACA mm6_refGene_NM_009242 MatScan TTF-1 103 110 0.88 + . # ACAAGGGG mm6_refGene_NM_009242 MatScan C/EBPalpha 104 106 1.00 + . # CAA mm6_refGene_NM_009242 MatScan C/EBPbeta 104 106 1.00 + . # CAA mm6_refGene_NM_009242 MatScan DBP 104 108 1.00 + . # CAAGG mm6_refGene_NM_009242 MatScan c-Fos 125 127 1.00 - . # ACA mm6_refGene_NM_009242 MatScan AP-1 127 133 0.92 + . # TGACTCT mm6_refGene_NM_009242 MatScan c-Fos 127 132 1.00 - . # GAGTCA mm6_refGene_NM_009242 MatScan c-Jun 127 130 0.96 + . # TGAC mm6_refGene_NM_009242 MatScan TCF-1(P) 147 156 0.87 - . # ACCGAGAGAA mm6_refGene_NM_009242 MatScan IPF1 155 161 0.88 + . # GTTAATG mm6_refGene_NM_009242 MatScan HOXA5 156 160 0.94 + . # TTAAT mm6_refGene_NM_009242 MatScan C/EBPbeta 158 162 1.00 - . # ACATT mm6_refGene_NM_009242 MatScan C/EBPdelta 158 160 1.00 - . # ATT mm6_refGene_NM_009242 MatScan c-Fos 160 162 1.00 - . # ACA mm6_refGene_NM_009242 MatScan GR 160 164 0.87 - . # AGACA mm6_refGene_NM_009242 MatScan TFE3 161 166 1.00 - . # CTAGAC mm6_refGene_NM_009242 MatScan T3R-alpha 163 169 0.90 - . # GTCCTAG mm6_refGene_NM_009242 MatScan c-Fos 170 175 0.86 + . # TCTTCA mm6_refGene_NM_009242 MatScan AP-1 171 179 0.88 - . # TGACTGAAG mm6_refGene_NM_009242 MatScan c-Jun 172 175 1.00 - . # TGAA mm6_refGene_NM_009242 MatScan AP-1 173 179 0.88 - . # TGACTGA mm6_refGene_NM_009242 MatScan c-Fos 174 179 0.86 + . # CAGTCA mm6_refGene_NM_009242 MatScan CREMtau1 175 181 0.88 + . # AGTCAGC mm6_refGene_NM_009242 MatScan CREMtau 175 181 0.88 + . # AGTCAGC mm6_refGene_NM_009242 MatScan CREMtau2 175 181 0.88 + . # AGTCAGC mm6_refGene_NM_009242 MatScan CREMtaualpha 175 181 0.88 + . # AGTCAGC mm6_refGene_NM_009242 MatScan c-Jun 176 179 0.96 - . # TGAC mm6_refGene_NM_009242 MatScan TFE3 176 181 0.86 - . # GCTGAC mm6_refGene_NM_009242 MatScan c-Fos 177 182 0.95 + . # TCAGCA mm6_refGene_NM_009242 MatScan CREMtau1 178 184 1.00 + . # CAGCAGC mm6_refGene_NM_009242 MatScan CREMtau 178 184 1.00 + . # CAGCAGC mm6_refGene_NM_009242 MatScan CREMtau2 178 184 1.00 + . # CAGCAGC mm6_refGene_NM_009242 MatScan CREMtaualpha 178 184 1.00 + . # CAGCAGC mm6_refGene_NM_009242 MatScan c-Jun 193 196 1.00 + . # TGAA mm6_refGene_NM_009242 MatScan RXR-alpha 193 198 0.94 - . # TGTTCA mm6_refGene_NM_009242 MatScan GR 194 198 0.93 + . # GAACA mm6_refGene_NM_009242 MatScan GR 194 200 0.88 + . # GAACAAG mm6_refGene_NM_009242 MatScan YY1 194 204 0.88 + . # GAACAAGGCCT mm6_refGene_NM_009242 MatScan TTF-1 195 200 0.87 + . # AACAAG mm6_refGene_NM_009242 MatScan C/EBPbeta 196 200 0.88 + . # ACAAG mm6_refGene_NM_009242 MatScan c-Fos 196 198 1.00 + . # ACA mm6_refGene_NM_009242 MatScan C/EBPalpha 197 199 1.00 + . # CAA mm6_refGene_NM_009242 MatScan C/EBPbeta 197 199 1.00 + . # CAA mm6_refGene_NM_009242 MatScan DBP 197 201 1.00 + . # CAAGG mm6_refGene_NM_009242 MatScan AP-2alphaA 199 208 0.87 - . # GGCCAGGCCT mm6_refGene_NM_009242 MatScan NF-1 202 207 0.97 + . # CCTGGC mm6_refGene_NM_009242 MatScan GR 207 213 0.88 - . # GAACAGG mm6_refGene_NM_009242 MatScan c-Fos 209 211 1.00 - . # ACA mm6_refGene_NM_009242 MatScan GR 209 213 0.93 - . # GAACA mm6_refGene_NM_009242 MatScan c-Fos 215 220 0.89 - . # TCACCT mm6_refGene_NM_009242 MatScan c-Fos 218 223 1.00 - . # GAATCA mm6_refGene_NM_009242 MatScan c-Jun 218 221 0.88 + . # TGAT mm6_refGene_NM_009242 MatScan C/EBPdelta 220 222 1.00 + . # ATT mm6_refGene_NM_009242 MatScan CREMtau1 221 227 0.88 + . # TTCCAGC mm6_refGene_NM_009242 MatScan CREMtau 221 227 0.88 + . # TTCCAGC mm6_refGene_NM_009242 MatScan CREMtau2 221 227 0.88 + . # TTCCAGC mm6_refGene_NM_009242 MatScan CREMtaualpha 221 227 0.88 + . # TTCCAGC mm6_refGene_NM_009242 MatScan CREMtau1 224 230 1.00 + . # CAGCAGC mm6_refGene_NM_009242 MatScan CREMtau2 224 230 1.00 + . # CAGCAGC mm6_refGene_NM_009242 MatScan CREMtau 224 230 1.00 + . # CAGCAGC mm6_refGene_NM_009242 MatScan CREMtaualpha 224 230 1.00 + . # CAGCAGC mm6_refGene_NM_009242 MatScan C/EBPbeta 229 233 0.91 - . # ACAGC mm6_refGene_NM_009242 MatScan CREMtau1 229 235 0.88 - . # GAACAGC mm6_refGene_NM_009242 MatScan CREMtau2 229 235 0.88 - . # GAACAGC mm6_refGene_NM_009242 MatScan CREMtau 229 235 0.88 - . # GAACAGC mm6_refGene_NM_009242 MatScan CREMtaualpha 229 235 0.88 - . # GAACAGC mm6_refGene_NM_009242 MatScan GR 229 235 0.88 - . # GAACAGC mm6_refGene_NM_009242 MatScan c-Fos 231 233 1.00 - . # ACA mm6_refGene_NM_009242 MatScan GR 231 235 0.93 - . # GAACA mm6_refGene_NM_009242 MatScan CREMtau1 233 239 0.88 + . # TTCCAGC mm6_refGene_NM_009242 MatScan CREMtau2 233 239 0.88 + . # TTCCAGC mm6_refGene_NM_009242 MatScan CREMtau 233 239 0.88 + . # TTCCAGC mm6_refGene_NM_009242 MatScan CREMtaualpha 233 239 0.88 + . # TTCCAGC mm6_refGene_NM_009242 MatScan XPF-1 239 247 0.86 - . # GGGTCAGGG mm6_refGene_NM_009242 MatScan JunD 240 245 0.95 + . # CCTGAC mm6_refGene_NM_009242 MatScan TFE3 240 245 0.93 + . # CCTGAC mm6_refGene_NM_009242 MatScan c-Fos 242 247 0.86 - . # GGGTCA mm6_refGene_NM_009242 MatScan c-Jun 242 245 0.96 + . # TGAC mm6_refGene_NM_009242 MatScan RAR-alpha1 242 249 0.95 - . # GAGGGTCA mm6_refGene_NM_009242 MatScan RAR-beta 242 249 0.92 + . # TGACCCTC mm6_refGene_NM_009242 MatScan TFE3-S 246 254 0.86 + . # CCTCATGTC mm6_refGene_NM_009242 MatScan c-Jun 247 250 0.96 - . # TGAG mm6_refGene_NM_009242 MatScan C/EBPbeta 249 253 0.91 - . # ACATG mm6_refGene_NM_009242 MatScan c-Fos 251 253 1.00 - . # ACA mm6_refGene_NM_009242 MatScan GR 251 255 0.87 - . # AGACA mm6_refGene_NM_009242 MatScan HNF-3alpha 252 259 0.90 - . # AAACAGAC mm6_refGene_NM_009242 MatScan HNF-3B 252 259 0.92 - . # AAACAGAC mm6_refGene_NM_009242 MatScan TFE3 252 257 0.86 - . # ACAGAC mm6_refGene_NM_009242 MatScan c-Fos 255 257 1.00 - . # ACA mm6_refGene_NM_009242 MatScan XPF-1 259 267 0.86 + . # TAGGCAGGA mm6_refGene_NM_009242 MatScan AP-2alphaA 269 278 0.87 + . # CCCCAGAACA mm6_refGene_NM_009242 MatScan GR 274 278 0.93 + . # GAACA mm6_refGene_NM_009242 MatScan GR 274 280 0.94 + . # GAACAGA mm6_refGene_NM_009242 MatScan GATA-1 275 284 0.87 - . # CTCATCTGTT mm6_refGene_NM_009242 MatScan c-Fos 276 278 1.00 + . # ACA mm6_refGene_NM_009242 MatScan AP-1 281 291 0.89 - . # CACCTGTCTCA mm6_refGene_NM_009242 MatScan c-Jun 281 284 0.96 + . # TGAG mm6_refGene_NM_009242 MatScan GR 283 287 0.87 + . # AGACA mm6_refGene_NM_009242 MatScan TFE3-S 284 292 0.86 - . # CCACCTGTC mm6_refGene_NM_009242 MatScan c-Fos 285 287 1.00 + . # ACA mm6_refGene_NM_009242 MatScan USF2 285 294 0.91 - . # CCCCACCTGT mm6_refGene_NM_009242 MatScan USF-1 286 293 0.98 + . # CAGGTGGG mm6_refGene_NM_009242 MatScan ER-alpha 292 301 0.87 + . # GGGCCAGGGT mm6_refGene_NM_009242 MatScan XPF-1 292 300 0.86 + . # GGGCCAGGG mm6_refGene_NM_009242 MatScan NF-1 294 299 0.97 - . # CCTGGC mm6_refGene_NM_009242 MatScan VDR 295 302 0.94 - . # CACCCTGG mm6_refGene_NM_009242 MatScan C/EBPbeta 299 303 0.91 - . # ACACC mm6_refGene_NM_009242 MatScan c-Fos 301 303 1.00 - . # ACA mm6_refGene_NM_009242 MatScan GR 301 305 0.87 - . # AGACA mm6_refGene_NM_009242 MatScan TFE3 302 307 1.00 - . # CCAGAC mm6_refGene_NM_009242 MatScan CP2 304 311 1.00 - . # CTACCCAG mm6_refGene_NM_009242 MatScan GR 311 315 0.96 + . # GCACA mm6_refGene_NM_009242 MatScan c-Fos 313 315 1.00 + . # ACA mm6_refGene_NM_009242 MatScan C/EBPbeta 315 319 0.91 + . # ACAGC mm6_refGene_NM_009242 MatScan c-Fos 315 317 1.00 + . # ACA mm6_refGene_NM_009242 MatScan USF-1 322 329 0.89 - . # CTTGTGGT mm6_refGene_NM_009242 MatScan TFE3-S 323 331 0.86 + . # CCACAAGGC mm6_refGene_NM_009242 MatScan HES-1 324 329 0.94 + . # CACAAG mm6_refGene_NM_009242 MatScan SF-1 324 334 0.91 + . # CACAAGGCAAG mm6_refGene_NM_009242 MatScan TTF-1 324 329 0.95 + . # CACAAG mm6_refGene_NM_009242 MatScan C/EBPbeta 325 329 0.88 + . # ACAAG mm6_refGene_NM_009242 MatScan c-Fos 325 327 1.00 + . # ACA mm6_refGene_NM_009242 MatScan C/EBPalpha 326 328 1.00 + . # CAA mm6_refGene_NM_009242 MatScan C/EBPbeta 326 328 1.00 + . # CAA mm6_refGene_NM_009242 MatScan DBP 326 330 1.00 + . # CAAGG mm6_refGene_NM_009242 MatScan XPF-1 327 335 0.86 + . # AAGGCAAGG mm6_refGene_NM_009242 MatScan TTF-1 329 334 0.86 + . # GGCAAG mm6_refGene_NM_009242 MatScan C/EBPalpha 331 333 1.00 + . # CAA mm6_refGene_NM_009242 MatScan C/EBPbeta 331 333 1.00 + . # CAA mm6_refGene_NM_009242 MatScan DBP 331 335 1.00 + . # CAAGG mm6_refGene_NM_009242 MatScan XPF-1 332 340 0.86 + . # AAGGAAGGG mm6_refGene_NM_009242 MatScan TFE3 348 353 0.86 + . # AAAGAC mm6_refGene_NM_009242 MatScan GR 350 354 0.87 + . # AGACA mm6_refGene_NM_009242 MatScan C/EBPbeta 352 356 0.91 + . # ACAGC mm6_refGene_NM_009242 MatScan c-Fos 352 354 1.00 + . # ACA mm6_refGene_NM_009242 MatScan DBP 356 360 1.00 - . # CAAAG mm6_refGene_NM_009242 MatScan C/EBPalpha 358 360 1.00 - . # CAA mm6_refGene_NM_009242 MatScan C/EBPbeta 358 360 1.00 - . # CAA mm6_refGene_NM_009242 MatScan STAT5B 362 373 0.85 - . # TTCTCCCCAGAA mm6_refGene_NM_009242 MatScan CP2 364 371 0.90 - . # CTCCCCAG mm6_refGene_NM_009242 MatScan Sp1 373 381 0.86 - . # CCTCCCCCT mm6_refGene_NM_009242 MatScan ER-alpha 383 392 0.91 + . # AGGCCAGGGG mm6_refGene_NM_009242 MatScan XPF-1 383 391 0.90 + . # AGGCCAGGG mm6_refGene_NM_009242 MatScan NF-1 385 390 0.97 - . # CCTGGC mm6_refGene_NM_009242 MatScan NF-kappaB 387 394 0.91 - . # TTCCCCTG mm6_refGene_NM_009242 MatScan TFE3 398 403 0.86 + . # GGAGAC mm6_refGene_NM_009242 MatScan GR 400 404 0.87 + . # AGACA mm6_refGene_NM_009242 MatScan c-Fos 402 404 1.00 + . # ACA mm6_refGene_NM_009242 MatScan DBP 420 424 1.00 - . # CAAAG mm6_refGene_NM_009242 MatScan CBF 421 429 0.86 + . # TTTGAGTGG mm6_refGene_NM_009242 MatScan C/EBPalpha 422 424 1.00 - . # CAA mm6_refGene_NM_009242 MatScan C/EBPbeta 422 424 1.00 - . # CAA mm6_refGene_NM_009242 MatScan c-Jun 423 426 0.96 + . # TGAG mm6_refGene_NM_009242 MatScan Sp1 426 435 0.86 + . # GTGGAGGCGG mm6_refGene_NM_009242 MatScan Sp1 427 435 0.85 - . # CCGCCTCCA mm6_refGene_NM_009242 MatScan Sp1 428 437 0.86 + . # GGAGGCGGAG mm6_refGene_NM_009242 MatScan VDR 434 441 0.94 - . # CACCCTCC mm6_refGene_NM_009242 MatScan c-Fos 437 442 0.89 - . # TCACCC mm6_refGene_NM_009242 MatScan c-Jun 440 443 0.96 + . # TGAG mm6_refGene_NM_009242 MatScan GR 442 446 0.87 + . # AGACA mm6_refGene_NM_009242 MatScan c-Fos 444 446 1.00 + . # ACA mm6_refGene_NM_009242 MatScan TFE3 444 449 0.86 + . # ACAGAC mm6_refGene_NM_009242 MatScan ER-alpha 448 457 0.91 - . # TGGGCAGGGT mm6_refGene_NM_009242 MatScan XPF-1 449 457 1.00 - . # TGGGCAGGG mm6_refGene_NM_009242 MatScan CP2 451 458 0.90 + . # CTGCCCAG mm6_refGene_NM_009242 MatScan AP-2alphaA 453 462 0.91 + . # GCCCAGAGCT mm6_refGene_NM_009242 MatScan TTF-1 463 470 0.96 + . # CCAAGAGG mm6_refGene_NM_009242 MatScan C/EBPalpha 464 466 1.00 + . # CAA mm6_refGene_NM_009242 MatScan C/EBPbeta 464 466 1.00 + . # CAA mm6_refGene_NM_009242 MatScan DBP 464 468 0.96 + . # CAAGA mm6_refGene_NM_009242 MatScan NERF-1a 466 477 0.87 - . # CAGGAAGCCTCT mm6_refGene_NM_009242 MatScan CREMtau1 477 483 0.94 - . # GAGCAGC mm6_refGene_NM_009242 MatScan CREMtau2 477 483 0.94 - . # GAGCAGC mm6_refGene_NM_009242 MatScan CREMtau 477 483 0.94 - . # GAGCAGC mm6_refGene_NM_009242 MatScan CREMtaualpha 477 483 0.94 - . # GAGCAGC mm6_refGene_NM_009242 MatScan TBP 486 492 0.86 + . # CTCTAAA