10 20 30 40 50 60 seq1 CTTATTGTATGCAATTAGCTCTTTGTGTGGATAAAAAGGTAAAACCATTCTGAAACAGGA || || |||||||||||| |||||| ||||| ||||||||||||| |||||||||| seq2 CT----GTGTGCAATTAGCTCATTGTGTAGATAAGAAGGTAAAACCATCTTGAAACAGGA 10 20 30 40 50 70 80 90 100 110 seq1 AACCAATACACTTCCTGTTTAATCAACAAATCTAAAC-ATTTATTCTTTTCATCTGTTTA |||||||| |||||||| ||||||||||||||||| ||||||||||||||||| | | seq2 AACCAATATCCTTCCTGTCTAATCAACAAATCTAAAAGATTTATTCTTTTCATCTATCTC 60 70 80 90 100 110 120 130 140 150 160 170 seq1 CTCTTGCTCTTGTCCACCACAATATGCTATTCACATGTTCAGTGTAGTTTTATGACAAAG ||||||| ||||||||||||| | ||| | ||| |||||| | ||||| | | || seq2 CTCTTGCGTTTGTCCACCACAACAGGCTGCTTACAGGTTCAGGATGGTTTTGACAAAGAG 120 130 140 150 160 170 180 190 200 210 220 230 seq1 AAAATTTTC-TGAGTTACTTTTGTATCCCCACCCCCTTAAAGAAAGGAGGAAAAACTGTT || |||||| |||||||||||||| || ||||||| || |||||||| |||| seq2 AACATTTTCATGAGTTACTTTTGTGTCTCCACCCC--------AAAGAGGAAAATTTGTT 180 190 200 210 220 240 250 260 270 280 290 seq1 TCATACAGAAGGCGTTAATTGCATGAATTAGAGCTATCACCTAAGTGTGGGCTAATGTAA |||||||||||||||| |||| |||||||| | || |||||||||||||||||| | seq2 TCATACAGAAGGCGTTCATTGTATGAATTAAAACTGCCACCTAAGTGTGGGCTAACCCGA 230 240 250 260 270 280 300 310 320 330 340 350 seq1 CAAAGAGGGATTTCACCTACATCCATTCAGTCAGTCTTTGGGGGTTTAAAGAAATTCCAA | ||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||| seq2 CCAAGAGGGATTTCACCTAAATCCATTCAGTCAGTGTATGGGGGTTTAAAGAAATTCCAG 290 300 310 320 330 340 360 370 380 390 400 410 seq1 AGAGTCATCAGAAGAGGAAAAATGAAGGTAATGTTTTTT--CAGACTGGTAAAGTCTTTG |||||||||||||||||||||| ||||||||| ||| | || || |||| | |||||| seq2 AGAGTCATCAGAAGAGGAAAAACAAAGGTAATGCTTTCTGCCACACAGGTAGACTCTTTG 350 360 370 380 390 400 420 430 440 450 460 470 seq1 AAAATATGTGTAATATGTAAAACATTTTGACACCCCCATAATATTTTTCCAGAATTAACA ||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||| seq2 AAAATATGTGTAATATGTAAAACATCGTGACACCCCCATATTATTTTTCCAGCATTAACA 410 420 430 440 450 460 480 490 500 seq1 GTATAAATTGCATCTCTTGTTCAAG-------- ||||||||||| || | || | ||| seq2 GTATAAATTGCCTCCCATGCTGAAGAGCTGCCT 470 480 490 500