Genome BioInformatics Research Lab

  IMIM * UPF * CRG * GRIB HOME Software geneid geneid server Predictions
 
geneid Web Server
 
   
geneid predictions on sequence submitted from basileia.imim.es are:


## date Fri Nov 21 11:52:58 2003
## source-version: geneid v 1.1 -- geneid@imim.es
# Sequence HS307871 - Length = 4514 bps
# Optimal Gene Structure. 2 genes. Score = 16.648019 
# Gene 1 (Reverse). 1 exons. 25 aa. Score = 1.632639 
   First       72      145	 1.63	- 0 2	 3.65	 6.41	 1.49	 0.00	AA   1: 25 HS307871_1

>HS307871_1|geneid_v1.1_predicted_protein_1|25_AA
MAGPWPGAVLESPRQLLGRCASWQag

# Gene 2 (Forward). 9 exons. 350 aa. Score = 15.015380 
   First     1833     1860	-1.30	+ 0 1	 0.16	 5.38	 0.94	 0.00	AA   1: 10 HS307871_2
Internal     1976     2055	 0.24	+ 2 0	 4.17	 4.71	-0.22	 0.00	AA  10: 36 HS307871_2
Internal     2132     2194	 0.44	+ 0 0	 4.23	 0.58	 6.38	 0.00	AA  37: 57 HS307871_2
Internal     2434     2682	 4.66	+ 0 0	 5.09	 0.16	16.28	 0.00	AA  58:140 HS307871_2
Internal     2749     2910	 3.19	+ 0 0	 4.65	 5.34	 5.50	 0.00	AA 141:194 HS307871_2
Internal     3279     3416	 0.97	+ 0 0	 1.52	 3.24	 7.80	 0.00	AA 195:240 HS307871_2
Internal     3576     3676	 3.23	+ 0 2	 2.70	 3.95	10.61	 0.00	AA 241:274 HS307871_2
Internal     3780     3846	-0.96	+ 1 0	 2.83	 1.86	 3.06	 0.00	AA 274:296 HS307871_2
Terminal     4179     4340	 4.55	+ 0 0	 2.65	 0.00	19.89	 0.00	AA 297:350 HS307871_2

>HS307871_2|geneid_v1.1_predicted_protein_2|350_AA
MRQAGRYLPEFRETRAAQDFFSTCRSPEACCELTLQPLRRFLLDAAIIFSDILVVPQALG
MEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGYVFQAITLTRQRLAGRVPLIGFA
GAPVMWDRAGTRGAGRSLWKWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDA
LVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPM
IIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIG
QLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHSRLLRQN*


Species:
Homo sapiens

Command:
geneid -P human.param geneid20944basileia.imim.es.fasta

Running time:
0.64 secs

 
  Disclaimer   webmaster