FGENESH 2.4 Prediction of potential genes in Homo_sapiens genomic DNA
 Time    :   Mon May  8 09:56:14 2006
 Seq name: embl|U30787|U30787 Human uroporphyrinogen decarboxylase (URO-D) gene, complete 
 Length of sequence: 4514 
 Number of predicted genes 1 in +chain 1 in -chain 0
 Number of predicted exons 10 in +chain 10 in -chain 0
 Positions of predicted genes and exons: Variant   1 from   1, Score:62.352234 
   G Str   Feature   Start        End    Score           ORF           Len

   1 +    1 CDSf       144 -       214    1.65       144 -       212     69
   1 +    2 CDSi      1748 -      1860    4.88      1749 -      1859    111
   1 +    3 CDSi      1976 -      2055    6.13      1978 -      2055     78
   1 +    4 CDSi      2132 -      2194    6.46      2132 -      2194     63
   1 +    5 CDSi      2434 -      2682    2.94      2434 -      2682    249
   1 +    6 CDSi      2749 -      2910   10.64      2749 -      2910    162
   1 +    7 CDSi      3324 -      3416    7.44      3324 -      3416     93
   1 +    8 CDSi      3576 -      3676   11.26      3576 -      3674     99
   1 +    9 CDSi      3780 -      3846    0.13      3781 -      3846     66
   1 +   10 CDSl      4179 -      4340   14.60      4179 -      4340    162
   1 +      PolA      4397                1.13

Predicted protein(s):
>FGENESH:   1  10 exon (s)    144  -   4340   386 aa, chain +
MSQLARPRTELPTTPFPAFGQPLPPQGFPELKNDTFLRAAWGEETDYTPVWCMRQAGRYL
PEFRETRAAQDFFSTCRSPEACCELTLQPLRRFLLDAAIIFSDILVVPQALGMEVTMVPG
KGPSFPEPLREEQDLERLRDPEVVASELGYVFQAITLTRQRLAGRVPLIGFAGAPVMWDR
AGTRGAGRSLWKWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQ
VVAGAQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDGHFALEELAQAGYEVVG
LDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDDFGPHRYIANLGHGL
YPDMDPEHVGAFVDAVHKHSRLLRQN

© 1999 - 2006 www.softberry.com