## date Fri Sep 21 17:35:03 2007 ## source-version: geneid v 1.2 -- geneid@imim.es # Sequence chr5_random - Length = 143687 bps # Optimal Gene Structure. 2 genes. Score = 168.21 # Gene 1 (Reverse). 2 exons. 853 aa. Score = 161.30 Internal 14015 16549 166.29 - 2 1 3.15 3.29 246.32 -887.25 AA 8:853 chr5_random_1 First 34048 34069 -5.00 - 0 1 2.47 0.77 2.23 -7.70 AA 1: 8 chr5_random_1 >chr5_random_1|SGP_v1.0_predicted_cDNA_1|2557_NN ATGGACACAAACTCTACAAAAGTGTCACATTTGAAGACGAGCACTGAGGATGAGGAACCA ACTGAAGAATATGAAAATGTTGGAAATGCAGCATCTAAGTGGCCAAAAGTGGAGGATCCT ATCCCTGAATCTAAGGTTGGTGACACATGTGTTTGGGATAGCAAGGTAGAGAATCAACAG AAAAAGCCTGTGGAAAACAGGATGAAGGAGGACAAAAGCAGCATCAGGGAAGCAATCAGC AAAGCCAAGAGTACAGCAAATATAAAGACAGAACAGGAAGGTGAGGCATCTGAGAAGAGC TTGCATCTGAGCCCACAGCATATCACACACCAGACTATGCCTATAGGACAGAGAGGCAGT GAGCAAGGCAAACGTGTGGAGAACATTAATGGAACCTCCTACCCTAGTCTACAGCAGAAA ACCAATGCTGTTAAGAAATTACATAAATGTGATGAATGTGGGAAATCCTTCAAATATAAT TCCCGCCTTGTTCAACATAAAATTATGCACACTGGGGAAAAGCGCTATGAATGTGATGAC TGTGGAGGGACTTTCCGGAGCAGCTCGAGCCTTCGGGTCCACAAACGGATCCACACTGGG GAGAAGCCGTACAAGTGTGAGGAATGTGGGAAAGCCTACATGTCCTACTCCAGCCTTATA AACCACAAAAGCACCCATTCTGGGGAGAAGAACTGTAAATGTGATGAATGTGGAAAATCC TTCAATTATAGCTCTGTTCTGGACCAGCATAAAAGGATCCACACTGGGGAGAAGCCCTAT GAATGTGGTGAGTGTGGGAAGGCCTTCAGGAACAGCTCTGGGCTCAGAGTCCACAAAAGG ATCCACACGGGGGAGAAGCCCTATGAATGCGACATCTGTGGGAAAACCTTCAGTAACAGC TCTGGCCTTAGGGTCCATAAAAGGATCCACACAGGTGAGAAACCTTACGAATGTGATGAG TGTGGGAAGGCCTTCATTACTTGTAGAACACTTCTCAACCATAAAAGCATCCACTTTGGA GATAAACCCTATAAATGTGATGAGTGTGAGAAATCTTTTAATTATAGCTCTCTTCTCATT CAGCATAAAGTCATCCACACTGGAGAGAAACCTTATGAATGTGATGAATGTGGGAAGGCT TTCAGGAACAGCTCAGGCCTCATAGTGCATAAAAGGATCCACACAGGAGAGAAACCTTAC AAGTGTGATGTCTGTGGCAAAGCATTCAGCTATAGCTCAGGCCTCGCAGTCCATAAAAGC ATTCACCCTGGGAAGAAAGCCCATGAATGTAAGGAGTGTGGGAAATCCTTTAGTTATAAC TCACTACTTCTTCAACACAGAACTATTCATACCGGAGAGAGACCTTATGTATGTGATGTG TGTGGGAAAACGTTCAGAAACAATGCAGGCCTCAAAGTCCACAGGAGGCTCCATACTGGG GAAAAACCATATAAGTGTGATGTGTGTGGGAAAGCCTATATCTCACGCTCTAGCCTTAAA AATCACAAAGGAATCCACCTTGGGGAGAAGCCCTATAAATGTAGCTATTGTGAGAAATCC TTCAACTACAGCTCTGCCCTTGAACAGCATAAAAGGATTCATACCAGGGAAAAACCCTTT GGGTGTGATGAGTGTGGTAAAGCTTTCAGAAATAATTCTGGCCTTAAAGTACATAAACGA ATCCACACTGGGGAACGACCTTACAAATGTGAAGAATGTGGGAAAGCATACATCTCTCTC TCGAGCCTTATAAATCATAAAAGTGTACACCCTGGGGAGAAGCCCTTTAAGTGTGACGAG TGTGAGAAGGCCTTCATCACATACCGAACCCTTACAAACCACAAAAAAGTTCATCTTGGG GAGAAGCCCTACAAATGTGATGTGTGTGAGAAATCTTTTAATTACACATCGCTCCTTTCT CAGCACAGAAGGGTCCACACTAGAGAGAAACCCTATGAATGTGACAGGTGTGAGAAGGTC TTCAGAAACAACTCAAGCCTTAAAGTTCATAAAAGAATCCATACTGGGGAGAGGCCCTAT GAATGTGATGTGTGTGGAAAAGCCTACATCTCACACTCAAGCCTTATTAACCATAAGAGT ACCCACCCTGGCAAGACACCCCATACATGTGATGAATGTGGAAAAGCTTTTTTCTCAAGC AGAACTCTTATAAGCCATAAAAGAGTCCATCTTGGGGAGAAACCCTTCAAGTGTGTTGAG TGTGGGAAATCTTTCAGTTACAGCTCTCTCCTTTCTCAGCACAAGAGGATCCACACAGGG GAGAAACCCTATGTGTGTGATAGGTGTGGGAAGGCCTTCAGGAACAGCTCAGGCCTCACA GTGCATAAAAGGATCCACACAGGTGAGAAACCCTATGAATGTGATGAGTGTGGGAAGGCA TACATCTCACACTCAAGTCTTATCAATCATAAAAGTGTCCACCAGGGGAAGCAGCCCTAT AATTGTGAGTGTGGGAAATCCTTCAATTATAGATCAGTCCTTGACCAGCACAAAAGGATC CACACTGGAAAGAAGCCATACCGATGTAATGAGTGTG >chr5_random_1|SGP_v1.0_predicted_protein_1|853_AA MDTNSTKVSHLKTSTEDEEPTEEYENVGNAASKWPKVEDPIPESKVGDTCVWDSKVENQQ KKPVENRMKEDKSSIREAISKAKSTANIKTEQEGEASEKSLHLSPQHITHQTMPIGQRGS EQGKRVENINGTSYPSLQQKTNAVKKLHKCDECGKSFKYNSRLVQHKIMHTGEKRYECDD CGGTFRSSSSLRVHKRIHTGEKPYKCEECGKAYMSYSSLINHKSTHSGEKNCKCDECGKS FNYSSVLDQHKRIHTGEKPYECGECGKAFRNSSGLRVHKRIHTGEKPYECDICGKTFSNS SGLRVHKRIHTGEKPYECDECGKAFITCRTLLNHKSIHFGDKPYKCDECEKSFNYSSLLI QHKVIHTGEKPYECDECGKAFRNSSGLIVHKRIHTGEKPYKCDVCGKAFSYSSGLAVHKS IHPGKKAHECKECGKSFSYNSLLLQHRTIHTGERPYVCDVCGKTFRNNAGLKVHRRLHTG EKPYKCDVCGKAYISRSSLKNHKGIHLGEKPYKCSYCEKSFNYSSALEQHKRIHTREKPF GCDECGKAFRNNSGLKVHKRIHTGERPYKCEECGKAYISLSSLINHKSVHPGEKPFKCDE CEKAFITYRTLTNHKKVHLGEKPYKCDVCEKSFNYTSLLSQHRRVHTREKPYECDRCEKV FRNNSSLKVHKRIHTGERPYECDVCGKAYISHSSLINHKSTHPGKTPHTCDECGKAFFSS RTLISHKRVHLGEKPFKCVECGKSFSYSSLLSQHKRIHTGEKPYVCDRCGKAFRNSSGLT VHKRIHTGEKPYECDECGKAYISHSSLINHKSVHQGKQPYNCECGKSFNYRSVLDQHKRI HTGKKPYRCNECg # Gene 2 (Forward). 3 exons. 181 aa. Score = 6.91 First 73716 73962 -2.77 + 0 1 2.75 2.09 13.01 -86.45 AA 1: 83 chr5_random_2 Internal 76368 76643 4.53 + 2 1 5.52 5.38 13.77 -96.60 AA 83:175 chr5_random_2 Internal 113387 113407 5.15 + 2 1 4.95 4.98 2.56 -7.35 AA 175:181 chr5_random_2 >chr5_random_2|SGP_v1.0_predicted_cDNA_2|544_NN ATGGAAGTGCGGTTCTTCAGGGGCCAGTTCTCTAGCGTGGTCCACCTCTACAGGGACGGG AAGGACCAGCCATTTATGCAGATGCCACAGTATCAAGGCAGGACAAAACTGGTGAAGGAT TCTATTGCGGAGGGGCGCATCTCTCTGAGGCTGGAAAACATTACTGTGTTGGATGCTGGC CTCTATGGGTGCAGGATTAGTTCCCAGTCTTACTACCAGAAGGCCATCTGGGAGCTACAG GTGTCAGCACTGGGCTCAGTTCCTCTCATTTCCATCACGGGATATGTTGATAGAGACATC CAGCTACTCTGTCAGTCCTCGGGCTGGTTCCCCCGGCCCACAGCGAAGTGGAAAGGTCCA CAAGGACAGGATTTGTCCACAGACTCCAGGACAAACAGAGACATGCATGGCCTGTTTGAT GTGGAGATCTCTCTGACCGTCCAAGAGAACGCCGGGAGCATATCCTGTTCCATGCGGCAT GCTCATCTGAGCCGAGAGGTGGAATCCAGGGTACAGATAGGAGGGAAAATCCAGGCGGAA CTGG >chr5_random_2|SGP_v1.0_predicted_protein_2|181_AA MEVRFFRGQFSSVVHLYRDGKDQPFMQMPQYQGRTKLVKDSIAEGRISLRLENITVLDAG LYGCRISSQSYYQKAIWELQVSALGSVPLISITGYVDRDIQLLCQSSGWFPRPTAKWKGP QGQDLSTDSRTNRDMHGLFDVEISLTVQENAGSISCSMRHAHLSREVESRVQIGGKIQAE Lgg