## date Fri Sep 21 17:35:00 2007
## source-version: geneid v 1.2 -- geneid@imim.es
# Sequence chr4_random - Length = 842648 bps
# Optimal Gene Structure. 6 genes. Score = 187.67 
# Gene 1 (Reverse). 3 exons. 85 aa. Score = 23.84 
Internal   280038   280248	24.49	- 1 0	-1.44	 1.58	36.34	-73.85	AA  15: 85 chr4_random_1
Internal   293715   293746	-1.96	- 0 2	-0.56	 4.84	 3.78	-11.20	AA   5: 15 chr4_random_1
   First   327118   327129	 1.30	- 0 0	 4.50	 1.16	 2.94	-4.20	AA   1:  4 chr4_random_1

>chr4_random_1|SGP_v1.0_predicted_cDNA_1|255_NN
ATGAAGCTGCAGGATTCACTGAGCATCGAGAGGCAGAGCGATGTCCAGGTCTTCCAGCTG
GAATCCACCTTCGACCTGAAGCGCTACCTGAGCAGCGCCGAGCGCGCCGGCCTGGCCGCC
TCCCTGCAGCTCACCGAGACGCAGGTTAAGATCTGGTTCCAGAACCGCCGCAACAAGTGG
AAGCGGCAGCTGGCAGCCGAGCTGGAGGCGGCCAGCCTGTCCCCGCCGGGAGCGCAGCGC
CTGGTCCGCGTGCCG

>chr4_random_1|SGP_v1.0_predicted_protein_1|85_AA
MKLQDSLSIERQSDVQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQNRRNKW
KRQLAAELEAASLSPPGAQRLVRVP

# Gene 2 (Reverse). 5 exons. 300 aa. Score = 75.41 
Terminal   493679   493924	26.63	- 0 0	 0.00	 1.83	37.59	-85.05	AA 219:300 chr4_random_2
Internal   495478   495708	26.05	- 0 0	 1.84	 2.75	33.53	-80.85	AA 142:218 chr4_random_2
Internal   496890   496946	 2.89	- 0 0	 0.65	 2.75	 9.50	-19.95	AA 123:141 chr4_random_2
Internal   498360   498588	15.64	- 1 0	-0.06	-3.36	34.70	-80.15	AA  46:122 chr4_random_2
   First   498738   498874	 4.20	- 0 2	 0.30	 2.14	14.68	-47.95	AA   1: 46 chr4_random_2

>chr4_random_2|SGP_v1.0_predicted_cDNA_2|900_NN
ATGGTGCAGACGGATGTGCTCCTACCAGAGCTGGCCCCACAGACAGTGCCACCCTACGAG
CTGCCCTGCAAAGAGTATGACGTGGCCAGAAACACGGGCGCCTACACGTCCTCCGGCCTG
GCCACCGCTGGCTGGAGGGTGGGCGAGCGACTGCAGGACACGAACAGCTGGAAGTCGGAG
CTGCAGCGTGAGGTGGAGGCACTGGCTGCGGAGACCGACCTGCTGCTGGCCCAGAAGCAA
CGGCTGGAGCGCGCCCTGGATGCCATGGAGGTGCCCTTCTCCATCACCACTGACAACATG
CAGTGCAGCCAGCGCCACCAGCACACCAACCTTTTGCGTGACCATGTGGAGACAGAGCTG
CTGAAGGAAGCTGAGCTCATCCGGAACATTCAGGAGCTGCTGAAGAGAGCCATCATGCAA
GCACCCCGCAGCGCCTCCACCCCAGAGACCCGGACCAAGTTCACACAGGACAATCTGTGC
CACGCCCAGCGCGAGCGCCTGGACTCGGCCAACCTGTGGGTGCTGGTGGACTGCATCCTT
CGCGACACCTCCGAGGACCTGGGACTCCAGTGTGACGCCGTGAACCTGGCCTTCGGGCGC
CGCTGTGAGGAACTGGAGGACGCGCGGCACAAGCTGCAGCACCACCTGCACAAGCCCCAG
CTCACACCCCCCAACACCCCCAAGCTGGTGAGTGAGGTGGAGGAGCTGTACAAGTCCATC
ACAGCGCTGCGGGAGAAGCTTCTACAAGCGGAGCAGTCCCTGCGCAACCTCAAGGACATC
CACATGAGCCTGGAGAAGGACGTCACCGCCATGACCAACAGTGTCTTCATCGACCGCCAG
AAGTGCATGGCCCATCGTACTTGCTACCCCACCATTCTGCAGCTGGCTGGCTACCAGTGA


>chr4_random_2|SGP_v1.0_predicted_protein_2|300_AA
MVQTDVLLPELAPQTVPPYELPCKEYDVARNTGAYTSSGLATAGWRVGERLQDTNSWKSE
LQREVEALAAETDLLLAQKQRLERALDAMEVPFSITTDNMQCSQRHQHTNLLRDHVETEL
LKEAELIRNIQELLKRAIMQAPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCIL
RDTSEDLGLQCDAVNLAFGRRCEELEDARHKLQHHLHKPQLTPPNTPKLVSEVEELYKSI
TALREKLLQAEQSLRNLKDIHMSLEKDVTAMTNSVFIDRQKCMAHRTCYPTILQLAGYQ*


# Gene 3 (Reverse). 1 exons. 63 aa. Score = 10.26 
  Single   720345   720533	10.26	- 0 0	 0.00	 1.05	23.74	-65.10	AA   1: 63 chr4_random_3

>chr4_random_3|SGP_v1.0_predicted_cDNA_3|189_NN
ATGTCCATCACAGCGCTGTGGGAGAAGCTTCTAGAAGGGGAGCAGTCCCTTTGCAACCTC
GAGGACATCCACATGAGCCTGGAGAAGGATGTTACCGCCATGACCAACAGTCTCTTCATC
GACCGCCAGAAGTGCATGGCCCATCGTACTTGCTACACCCCCATCCTGCAGCTGGCTGGC
TACCAGTGA

>chr4_random_3|SGP_v1.0_predicted_protein_3|63_AA
MSITALWEKLLEGEQSLCNLEDIHMSLEKDVTAMTNSLFIDRQKCMAHRTCYTPILQLAG
YQ*

# Gene 4 (Reverse). 3 exons. 170 aa. Score = 45.08 
Terminal   721356   721529	 7.27	- 0 0	 0.00	 1.10	20.78	-59.85	AA 113:170 chr4_random_4
Internal   722143   722373	26.33	- 0 0	 1.84	 2.75	33.73	-80.85	AA  36:112 chr4_random_4
   First   723071   723175	11.48	- 0 0	 0.44	 1.40	19.10	-36.75	AA   1: 35 chr4_random_4

>chr4_random_4|SGP_v1.0_predicted_cDNA_4|510_NN
ATGAACCGAGAGCACACAGAGATCTGCGAGATGGACTGGTCGGACAAGGTGGAGGCCTAC
AACCTCGACGAGACTTGCGGGCGCCACCACAGCCAGAGCACCGAGCCCCGCAGCGCCTCC
ACCCCAGAGACCCGGACCAAGTTCACACAGGACAATCTGTGCCACGCCCAGCGCGAGCGC
CTGGACTCGGCCAACCTGTGGGTGCTTGTGGACTGCATCCTTCGCGACACCTCCGAGGAC
CTGGGACTCCAGTGTGACGCCGTGAACCTGGCCTTCGGGCGCCGCTGTGAGGAACTGGAG
GACGTGCGGCACAAGCTGCAGCACCACCTGCACAAGATGCTGCGGGAAATCACAGATCAG
GAACACAACGTGGTGGCACTGAAGGAGGCCATCAAGGACAAGGAGGAACCTCTGCACATA
GCCCAGACCCGGCTGTACCTGCTCTCACACCGGCCCAACATGCAGCTGTGCCGCGAAGCA
GCCCAGTTCAGGTACTGCCTGGGCCTCTGA

>chr4_random_4|SGP_v1.0_predicted_protein_4|170_AA
MNREHTEICEMDWSDKVEAYNLDETCGRHHSQSTEPRSASTPETRTKFTQDNLCHAQRER
LDSANLWVLVDCILRDTSEDLGLQCDAVNLAFGRRCEELEDVRHKLQHHLHKMLREITDQ
EHNVVALKEAIKDKEEPLHIAQTRLYLLSHRPNMQLCREAAQFRYCLGL*

# Gene 5 (Reverse). 2 exons. 177 aa. Score = 21.85 
Terminal   724904   725407	29.74	- 0 0	 0.00	-0.76	55.24	-175.35	AA  10:177 chr4_random_5
   First   734862   734888	-7.89	- 0 0	 3.24	 2.08	-2.66	-9.45	AA   1:  9 chr4_random_5

>chr4_random_5|SGP_v1.0_predicted_cDNA_5|531_NN
ATGGGGAGAGCACCGCCAGCAGCGGGGCTGGAGGTGTGGTTCCAGAACTGCTATGCTCGC
TACCACCAGGCCTTCGCCGACTGCAACCAGTCAGAGCGGGAGCTGCAGGGGCACGAGAGC
CAGCAGCTGGCCGCAGAGACCCAGGCGCTGGCACAGTCGACACAGCAAGACTCCACGTGC
AGGGTGGGCGAGCGACTGCAGGACACGCACAGCTGGAAGTCGGAGCTGCAGCGCGAGGTG
AAGGTGCTGGCTGCGGAGACCGACCTGCTGCTGGCCCAGAAGCAACGGCTGGAGTGCGCC
CTGGATGCCATGGAGGTGCCCTTCTCCATTGCCACTGACAACCTGCAGTGCAGCCAGTGC
CACCAGCACGCCAACCTTGTGCATGACCATGTGGAGACGGAGCTGCTGAAGGTGCCAGCA
GCCTTGGGTGGCCAGGACTTGTGGGCACAGAGAGGAGGAGCCCCCGGCAGTTCATGTGGA
CAAGCCACGTGGCTGCTGCAAGCACACGGGAGACCAGCCCTCTATGCGTGA

>chr4_random_5|SGP_v1.0_predicted_protein_5|177_AA
MGRAPPAAGLEVWFQNCYARYHQAFADCNQSERELQGHESQQLAAETQALAQSTQQDSTC
RVGERLQDTHSWKSELQREVKVLAAETDLLLAQKQRLECALDAMEVPFSIATDNLQCSQC
HQHANLVHDHVETELLKVPAALGGQDLWAQRGGAPGSSCGQATWLLQAHGRPALYA*

# Gene 6 (Forward). 1 exons. 67 aa. Score = 11.23 
   First   740150   740352	11.23	+ 0 2	-1.16	 0.94	25.95	-71.05	AA   1: 67 chr4_random_6

>chr4_random_6|SGP_v1.0_predicted_cDNA_6|203_NN
ATGAAGTTATTCGGCTTCGGGAGCCGCAGGGGCCAGACGGCCCACGGCTCCATAGAACAT
GTCTACACGGGTTCCGGATACCGAATCCGGGACTCCGAACTGCAGAAGATCCACAGGGCA
GCTGTCAAGGGCGACGCCGTGGGGGTGGAGCGCTGCCTGGCGCGCAGGAGCGGAGACCTG
GATGCCCTGGACAAGCAGCACAG

>chr4_random_6|SGP_v1.0_predicted_protein_6|67_AA
MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL
DALDKQHg