## date Fri Sep 21 17:35:29 2007
## source-version: geneid v 1.2 -- geneid@imim.es
# Sequence chr22_random - Length = 257318 bps
# Optimal Gene Structure. 5 genes. Score = 167.87 
# Gene 1 (Forward). 2 exons. 254 aa. Score = 85.62 
Internal    13963    14119	 3.07	+ 2 2	 2.95	 1.99	12.79	-54.95	AA   1: 53 chr22_random_1
Terminal    14709    15312	82.54	+ 1 0	 3.04	 0.00	94.42	-210.35	AA  53:254 chr22_random_1

>chr22_random_1|SGP_v1.0_predicted_cDNA_1|761_NN
GGAGCCAGGCTCGGCATTTCTGGCAGCAAGATGAACCCCCCCAGAGCCCCTGGGATCGAG
TGAAGGACCTGGCCACTGTGTACGTGGATGTGCTCAAAGACAGCGGCAGAGACTATGTGT
CCCAGTTTGAAGGCTCCGCCTTGGGAAAACAGCTAAACCTAAAGCTCCTTGACAACTGGG
ACAGCGTGACCTCCACCTTCAGCAAGCTGCGCGAACAGCTCGGCCCTGTGACCCAGGAGT
TCTGGGATAACCTGGAAAAGGAGACAGAGGGCCTGAGGCAGGAGATGAGCAAGGATCTGG
AGGAGGTGAAGGCCAAGGTGCAGCCCTACCTGGACGACTTCCAGAAGAAGTGGCAGGAGG
AGATGGAGCTCTACCGCCAGAAGGTGGAGCCGCTGCGCGCAGAGCTCCAAGAGGGCGCGC
GCCAGAAGCTGCACGAGCTGCAAGAGAAGCTGAGCCCACTGGGCGAGGAGATGCGCGACC
GCGCGCGCGCCCATGTGGACGCGCTGCGCACGCATCTGGCCCCCTACAGCGACGAGCTGC
GCCAGCGCTTGGCCGCGCGCCTTGAGGCTCTCAAGGAGAACGGCGGCGCCAGACTGGCCG
AGTACCACGCCAAGGCCACCGAGCATCTGAGCACGCTCAGCGAGAAGGCCAAGCCCGCGC
TCGAGGACCTCCGCCAAGGCCTGCTGCCCGTGCTGGAGAGCTTCAAGGTCAGCTTCCTGA
GCGCTCTCGAGGAGTACACTAAGAAGCTCAACACCCAGTGA

>chr22_random_1|SGP_v1.0_predicted_protein_1|254_AA
ggSQARHFWQQDEPPQSPWDRVKDLATVYVDVLKDSGRDYVSQFEGSALGKQLNLKLLDN
WDSVTSTFSKLREQLGPVTQEFWDNLEKETEGLRQEMSKDLEEVKAKVQPYLDDFQKKWQ
EEMELYRQKVEPLRAELQEGARQKLHELQEKLSPLGEEMRDRARAHVDALRTHLAPYSDE
LRQRLAARLEALKENGGARLAEYHAKATEHLSTLSEKAKPALEDLRQGLLPVLESFKVSF
LSALEEYTKKLNTQ*

# Gene 2 (Reverse). 2 exons. 39 aa. Score = 0.93 
Terminal    20042    20072	-3.29	- 1 0	 0.00	 4.99	 1.84	-9.80	AA  29: 39 chr22_random_2
   First    20219    20304	 4.22	- 0 2	 1.50	-0.20	13.48	-30.10	AA   1: 29 chr22_random_2

>chr22_random_2|SGP_v1.0_predicted_cDNA_2|117_NN
ATGCAGGGCTACATGAAGCACGCCACCAAGACCGCCAAGGATGCACTGAGCAGCGTGCAG
GAGTCCCAGGTGGCCCAGCAGGCCAGGGCCTTTGTCAGGCTGCTGCGGGAGAGATGA

>chr22_random_2|SGP_v1.0_predicted_protein_2|39_AA
MQGYMKHATKTAKDALSSVQESQVAQQARAFVRLLRER*

# Gene 3 (Forward). 2 exons. 60 aa. Score = 7.79 
   First    27917    27965	 6.34	+ 0 1	 1.91	 4.32	 7.78	-17.15	AA   1: 17 chr22_random_3
Terminal    28323    28453	 1.45	+ 2 0	 2.50	 0.00	12.90	-44.80	AA  17: 60 chr22_random_3

>chr22_random_3|SGP_v1.0_predicted_cDNA_3|180_NN
ATGTTCCTGAAGGCCGTGGTCCTGACCCTGGCCCTGGTGGCTGTCGCCGGAGCCAGGGCT
GAGGTCAGTGCTGACCAGGTGGCCACAGTGATGTGGGACTACTTCAGCCAGCTGAGCAAC
AATGCCAAGGAGGCCGTGGAACATCTCCAGAAATCTGAACTCACCCAGCAACTCAAGTAA


>chr22_random_3|SGP_v1.0_predicted_protein_3|60_AA
MFLKAVVLTLALVAVAGARAEVSADQVATVMWDYFSQLSNNAKEAVEHLQKSELTQQLK*


# Gene 4 (Forward). 2 exons. 192 aa. Score = 67.67 
   First    29540    30100	72.77	+ 0 0	 1.24	-0.84	87.53	-196.35	AA   1:187 chr22_random_4
Terminal    31761    31775	-5.11	+ 0 0	 3.17	 0.00	 1.74	-4.20	AA 188:192 chr22_random_4

>chr22_random_4|SGP_v1.0_predicted_cDNA_4|576_NN
ATGGAGAGAGTGCTGCGGGAGAACGCCGACAGCCTGCAGGCCTCGCTGAGGCCCCACGCC
GACGAGCTCAAGGCCAAGATCGACCAGAACGTGGAGGAGCTCAAGGGACGCCTTACGCCC
TACGCTGACGAATTCAAAGTCAAGATTGACCAGACCGTGGAGGAGCTGCGCCGCAGCCTG
GCTCCCTATGCTCAGGACACGCAGGAGAAGCTCAACCACCAGCTTGAGGGCCTGACCTTC
CAGATGAAGAAGAACGCCGAGGAGCTCAAGGCCAGGATCTCGGCCAGTGCCGAGGAGCTG
CGGCAGAGGCTGGCGCCCTTGGCCGAGGACGTGCGTGGCAACCTGAGGGGCAACACCGAG
GGGCTGCAGAAGTCACTGGCAGAGCTGGGTGGGCACCTGGACCAGCAGGTGGAGGAGTTC
CGACGCCGGGTGGAGCCCTACGGGGAAAACTTCAACAAAGCCCTGGTGCAGCAGATGGAA
CAGCTCAGGCAGAAACTGGGCCCCCATGCGGGGGACGTGGAAGGCCACTTGAGCTTCCTG
GAGAAGGACCTGAGGGACAAGGCCACACTCTATTAA

>chr22_random_4|SGP_v1.0_predicted_protein_4|192_AA
MERVLRENADSLQASLRPHADELKAKIDQNVEELKGRLTPYADEFKVKIDQTVEELRRSL
APYAQDTQEKLNHQLEGLTFQMKKNAEELKARISASAEELRQRLAPLAEDVRGNLRGNTE
GLQKSLAELGGHLDQQVEEFRRRVEPYGENFNKALVQQMEQLRQKLGPHAGDVEGHLSFL
EKDLRDKATLY*

# Gene 5 (Forward). 6 exons. 340 aa. Score = 5.86 
   First   205122   205171	-4.38	+ 0 2	 2.56	 1.07	 3.61	-17.50	AA   1: 17 chr22_random_5
Internal   205989   206044	 3.83	+ 1 1	 2.51	 4.92	 6.41	-19.60	AA  17: 36 chr22_random_5
Internal   212973   213003	 2.68	+ 2 2	 4.65	 4.27	 2.72	-10.85	AA  36: 46 chr22_random_5
Internal   236688   236762	 0.80	+ 1 2	 2.80	 5.51	 4.15	-26.25	AA  46: 71 chr22_random_5
Internal   239632   240139	-4.02	+ 1 0	-3.14	 0.59	33.66	-177.80	AA  71:240 chr22_random_5
Internal   256595   256894	 6.96	+ 0 0	 1.94	 5.10	20.98	-105.00	AA 241:340 chr22_random_5

>chr22_random_5|SGP_v1.0_predicted_cDNA_5|1020_NN
ATGGAGATCCAGCAGCCAAGCACAAATCTGCTGGCTCAGAGTTTGAGGAGAATTCAACAA
CAAATTTTGGAACGTAAAAAGAAGATACTTAAAAAGGAGAAACGAGATGTTGAAATTTCT
GATGAATCTGCAGTCAGATTAACCAAACAAAGAAAGATTGGGAAAATGTATCCTCAGCAA
TTTCCCAAGAAACTGAAGGAAGAGCACGATAGAAAAACAAATGCTGCCCTTGTAAAGTAT
ATAAAACTCAATGAGGAATTGATAACAAAAACAGCATTCTGGTATCAACAAGAGCTTAAT
GATGTCAAAGCTGAGAATACAAGGCTCAATTCCGAACTGTTGAAGGAAGAAGAAAGCAAC
AAAAGACTGGAAGCTGAAACTGAATCTTATCAGTCTAGACTGGCTGCTACTATAAGTAAA
CACAGTGAAAGTGTGAAAACAGAAAGAAACCTAAAACTTGCTTTAGAGAGAACGCAAGAT
GTTTCCGTACAAGTAAAAATGAGTTCTGATATTTCCGAAGTAGAAGATAAGAATGAGTTT
CTTACTGAACAACTTTCTAAAACACAAAATAAATTCAATACCTTAAAAGATAAGTTCCGT
AAGACAAGAGATACTCTCAGAAAAAAGTCATTGGCTTCAGAAACTGTACAAAACGACCTA
AGCCAAACACAGCAGCAAATAAAGGAAATGAAAGAGATGTATCAAAATGCAGAAGCTAAA
TTTGATGATCTTATGGCAGAGGAGGAAGCTGTATCTTCAAAATGTGTCAATTTGTCTAAA
GACAATCAAGTTATCCAACAGGAGTTATTATCTATGAAAAAAGTACAACAAGAATGTGAA
AAACTTGAGGAGAATCAAAAGATGTTGGAAGAAGAAATATTAAATCTTAAGACACATATG
GAAAACAGTATGGTAGAACTTAGTAAACTACAAGAATATAAATCAGAGCTAGATGAAAGG
GCAATGCAGGCAGTAGAAAAATTAAAAGAAATCCATTTACAGGTTACTTGTTTAAATCAG


>chr22_random_5|SGP_v1.0_predicted_protein_5|340_AA
MEIQQPSTNLLAQSLRRIQQQILERKKKILKKEKRDVEISDESAVRLTKQRKIGKMYPQQ
FPKKLKEEHDRKTNAALVKYIKLNEELITKTAFWYQQELNDVKAENTRLNSELLKEEESN
KRLEAETESYQSRLAATISKHSESVKTERNLKLALERTQDVSVQVKMSSDISEVEDKNEF
LTEQLSKTQNKFNTLKDKFRKTRDTLRKKSLASETVQNDLSQTQQQIKEMKEMYQNAEAK
FDDLMAEEEAVSSKCVNLSKDNQVIQQELLSMKKVQQECEKLEENQKMLEEEILNLKTHM
ENSMVELSKLQEYKSELDERAMQAVEKLKEIHLQVTCLNQ