## date Fri Sep 21 17:35:20 2007 ## source-version: geneid v 1.2 -- geneid@imim.es # Sequence chr16_random - Length = 105485 bps # Optimal Gene Structure. 3 genes. Score = 104.86 # Gene 1 (Forward). 3 exons. 172 aa. Score = 15.02 Internal 42482 42547 0.11 + 2 1 2.59 2.63 5.90 -23.10 AA 1: 23 chr16_random_1 Internal 78122 78254 2.22 + 2 2 3.47 2.62 10.10 -46.55 AA 23: 67 chr16_random_1 Terminal 78721 79036 12.69 + 1 0 4.46 0.00 28.27 -109.55 AA 67:172 chr16_random_1 >chr16_random_1|SGP_v1.0_predicted_cDNA_1|515_NN CTGTCATCGCCACACCGAGGCTGTTCAGCACCGCAGGACCCGTTCTCTTTGGTATTGGTG GCTTCGTTCAGGCCAGGTCTTCCTCCTATAGTGGAGAGTATGGAAGTGGTGGTGGAAAGC GATTCTCTCATTCTGGCAACCAGTTGGACGGCCCCATCACCGCCCTCCGGGTCCGAGTCA ACACATACTACATCGTAGGTCTTCAGGTGCGCTATGGCAAGGTGTGGAGCGACTATGTGG GTGGTCGCAACGGAGACCTGGAGGAGATCTTTCTGCACCCTGGGGAATCAGTGATCCAGG TTTCTGGGAAGTACAAGTGGTACCTGAAGAAGCTGGTATTTGTGACAGACAAGGGCCGCT ATCTGTCTTTTGGGAAAGACAGTGGCACAAGTTTCAATGCCGTCCCCTTGCACCCCAACA CCGTGCTCCGCTTCATCAGTGGCCGGTCTGGTTCTCTCATCGATGCCATTGGCCTGCACT GGGATGTTTACCCCACTAGCTGCAGCAGATGCTGA >chr16_random_1|SGP_v1.0_predicted_protein_1|172_AA ctVIATPRLFSTAGPVLFGIGGFVQARSSSYSGEYGSGGGKRFSHSGNQLDGPITALRVR VNTYYIVGLQVRYGKVWSDYVGGRNGDLEEIFLHPGESVIQVSGKYKWYLKKLVFVTDKG RYLSFGKDSGTSFNAVPLHPNTVLRFISGRSGSLIDAIGLHWDVYPTSCSRC* # Gene 2 (Forward). 4 exons. 183 aa. Score = 18.87 First 89398 89467 3.53 + 0 1 3.23 2.11 7.73 -24.50 AA 1: 24 chr16_random_2 Internal 97241 97395 -0.11 + 2 0 4.39 4.03 6.89 -54.25 AA 24: 75 chr16_random_2 Internal 97623 97832 8.25 + 0 0 3.42 4.03 16.72 -73.50 AA 76:145 chr16_random_2 Terminal 97912 98025 7.20 + 0 0 5.22 0.00 13.26 -38.85 AA 146:183 chr16_random_2 >chr16_random_2|SGP_v1.0_predicted_cDNA_2|549_NN ATGGCCGCGGGCGGCTCGACGCAGCAGAGGCGACGCGAGATGGCGGCAGCTTCAGCGGCG GCGATCTCAGGGAAGACGCACACAATGCTGGGCAGCCCAGAGCAACCTGGGGTGATCCCG CGGGCTCTCATGGACCTCCTGCAGCTCACAAGGGAGGAGGGTGCCGAGGGCCGGCCATGG GCCCTTTCTGTCACCATGTCTTACCTAGAGATCTACCAGGAGAAGGTATTAGACCTCCTG GACCCTGCTTCGGGAGACCTGGTAATCCGAGAAGACTGCCGGGGGAATATCCTGATTCCG GGTCTCTCCCAGAAGCCCATCAGTAGCTTTGCTGATTTTGAGCGGCACTTCCTGCCAGCC AGTCGAAATCGGACTGTAGGAGCCACCCGGCTCAACCAGCGCTCCTCCCGCAGTCATGCT GTGCTCCTGGTCAAGGTGGACCAGCGGGAACGTTTGGCCCCATTTCGCCAGCGAGAGGGA AAACTCTACCTGATTGACTTGGCTGGGTCAGAGGACAACCGGCGCACAGGCAACAAGGCC TTCGGCTAA >chr16_random_2|SGP_v1.0_predicted_protein_2|183_AA MAAGGSTQQRRREMAAASAAAISGKTHTMLGSPEQPGVIPRALMDLLQLTREEGAEGRPW ALSVTMSYLEIYQEKVLDLLDPASGDLVIREDCRGNILIPGLSQKPISSFADFERHFLPA SRNRTVGATRLNQRSSRSHAVLLVKVDQRERLAPFRQREGKLYLIDLAGSEDNRRTGNKA FG* # Gene 3 (Forward). 4 exons. 306 aa. Score = 70.96 First 101438 101584 6.41 + 0 0 4.21 5.23 9.40 -51.45 AA 1: 49 chr16_random_3 Internal 103461 103673 9.70 + 0 0 4.35 0.20 20.78 -74.55 AA 50:120 chr16_random_3 Internal 103762 103821 0.61 + 0 0 3.45 1.73 6.02 -21.00 AA 121:140 chr16_random_3 Internal 104775 105274 54.25 + 0 2 -2.89 -0.35 75.81 -175.00 AA 141:306 chr16_random_3 >chr16_random_3|SGP_v1.0_predicted_cDNA_3|920_NN ATGGACCCGGCCATGCTGGAGCGCCTCCTCAGCTTGGACCGTCTGCTTGCCTCCCAGGGG AGCCAGGGGGCCCCTCTGTTGAGTACCCCAAAGCGAGAGCGGATGGTGCTAATGAAGACA GTAGAAGAGAAGGACCTAGAGATTGAGCTGGAGTCCCTGGATGCCCTAGAGCCTGAGGAG AAGGCTGAGGACTGCTGGGAGCTACAGATCAGCCCGGAGCTACTGGCTCATGGGCGCCAA AAAATACTGGATCTGCTGAACGAAGGCTCAGCCCGAGATCTCCGCAGTCTTCAGCGCATT GGCCCGAAGAAGGCCCAGCTAATCGTGGGCTGGCGGGAGCTCCACGGCCCCTTCAGCCAG GTGGAGGACCTGGAACGCGTGGAGGGCATAACGGGGAAACAGATGGAGTCCTTCCTGAAG AAGAAGACAAAGAGCAAGGGGCCCTACATCTGCGCTCTGTGCGCCAAGGAGTTCAAGAAC GGCTACAATCTCCGGAGGCACGAAGCCATCCACACGGGAGCCAAGGCCGGCCGGGTCCCC TCGGGTGCTATGAAGATGCCGACCATGGTGCCCCTGAGCCTCCTGAGCGTGCCCCAGCTG AGCGGAGCCGGCGGGGGAGGGGGAGAGGCGGGTGCCGGCGGCGGCGCTGCCGCAGTGGCC GCCGGTGGCGTGGTGACCACGACCGCCTCGGGGAAGCGCATCCGGAAGAACCATGCCTGC GAGATGTGTGGCAAGGCCTTCCGCGACGTCTACCACCTGAACCGACACAAGCTGTCGCAC TCGGACGAGAAGCCCTACCAGTGCCCGGTGTGCCAGCAGCGCTTCAAGCGCAAGGACCGC ATGAGCTACCACGTGCGCTCACATGACGGCGCTGTGCACAAGCCCTACAACTGCTCCCAC TGTGGCAAGAGCTTCTCCCG >chr16_random_3|SGP_v1.0_predicted_protein_3|306_AA MDPAMLERLLSLDRLLASQGSQGAPLLSTPKRERMVLMKTVEEKDLEIELESLDALEPEE KAEDCWELQISPELLAHGRQKILDLLNEGSARDLRSLQRIGPKKAQLIVGWRELHGPFSQ VEDLERVEGITGKQMESFLKKKTKSKGPYICALCAKEFKNGYNLRRHEAIHTGAKAGRVP SGAMKMPTMVPLSLLSVPQLSGAGGGGGEAGAGGGAAAVAAGGVVTTTASGKRIRKNHAC EMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYHVRSHDGAVHKPYNCSH CGKSFSg