## date Fri Jun 9 11:12:38 2006 ## source-version: geneid v 1.2 -- geneid@imim.es # Sequence chr22_random - Length = 257318 bps # Optimal Gene Structure. 8 genes. Score = 385.47 # Gene 1 (Forward). 3 exons. 152 aa. Score = 21.47 Internal 1834 1997 11.27 + 2 0 4.24 -0.08 10.64 12.61 AA 1: 55 chr22_random_1 Internal 3511 3643 8.06 + 0 1 5.28 2.00 5.21 9.90 AA 56:100 chr22_random_1 Terminal 4566 4723 2.14 + 2 0 4.56 0.00 4.30 7.06 AA 100:152 chr22_random_1 >chr22_random_1|SGP_v1.0_predicted_cDNA_1|455_NN AGCCTGTCATAGGGAACTGCATGGATAGAAGTTCTCCAGGACAAGCAGTGGAGCTGCCGG ATCACAATGGGCTCGGGTACCCAGCACGCCCCTCCGTCCATGAGCACCACAGGCCCCGGG CCCTCCAGAGACACCACACGATCCAGAACAGCGACGATGCTTATGTACAGCTGGATAACT TGCCAGGAATGAGTCTCGTGGCTGGGAAAGCACTTAGCTCTGCCCGGATGTCGGATGCAG TTCTCAGTCAGTCTTCGCTCATGGGCAGCCAGCAGTTTCAGGATGGGGAAAATGAGGAAT GTGGGGCAAGCCTGGGAGGTCATGAGCACCCAGACCTGAGTGATGGCAGCCAGCATTTAA ACTCCTCTTGCTATCCATCTACGTGTATTACAGACATTCTGCTCAGCTACAAGCACCCCG AAGTCTCCTTCAGCATGGAGCAGGCAGGCGTGTAA >chr22_random_1|SGP_v1.0_predicted_protein_1|152_AA agPVIGNCMDRSSPGQAVELPDHNGLGYPARPSVHEHHRPRALQRHHTIQNSDDAYVQLD NLPGMSLVAGKALSSARMSDAVLSQSSLMGSQQFQDGENEECGASLGGHEHPDLSDGSQH LNSSCYPSTCITDILLSYKHPEVSFSMEQAGV* # Gene 2 (Forward). 3 exons. 268 aa. Score = 140.66 First 13733 13775 -0.28 + 0 1 1.06 2.79 5.29 -15.05 AA 1: 15 chr22_random_2 Internal 13963 14119 13.81 + 2 2 2.95 1.99 12.79 1.57 AA 15: 67 chr22_random_2 Terminal 14709 15312 127.13 + 1 0 3.04 0.00 94.42 24.30 AA 67:268 chr22_random_2 >chr22_random_2|SGP_v1.0_predicted_cDNA_2|804_NN ATGAAAGCTGCGGTGCTGACCTTGGCCGTGCTCTTCCTGACGGGGAGCCAGGCTCGGCAT TTCTGGCAGCAAGATGAACCCCCCCAGAGCCCCTGGGATCGAGTGAAGGACCTGGCCACT GTGTACGTGGATGTGCTCAAAGACAGCGGCAGAGACTATGTGTCCCAGTTTGAAGGCTCC GCCTTGGGAAAACAGCTAAACCTAAAGCTCCTTGACAACTGGGACAGCGTGACCTCCACC TTCAGCAAGCTGCGCGAACAGCTCGGCCCTGTGACCCAGGAGTTCTGGGATAACCTGGAA AAGGAGACAGAGGGCCTGAGGCAGGAGATGAGCAAGGATCTGGAGGAGGTGAAGGCCAAG GTGCAGCCCTACCTGGACGACTTCCAGAAGAAGTGGCAGGAGGAGATGGAGCTCTACCGC CAGAAGGTGGAGCCGCTGCGCGCAGAGCTCCAAGAGGGCGCGCGCCAGAAGCTGCACGAG CTGCAAGAGAAGCTGAGCCCACTGGGCGAGGAGATGCGCGACCGCGCGCGCGCCCATGTG GACGCGCTGCGCACGCATCTGGCCCCCTACAGCGACGAGCTGCGCCAGCGCTTGGCCGCG CGCCTTGAGGCTCTCAAGGAGAACGGCGGCGCCAGACTGGCCGAGTACCACGCCAAGGCC ACCGAGCATCTGAGCACGCTCAGCGAGAAGGCCAAGCCCGCGCTCGAGGACCTCCGCCAA GGCCTGCTGCCCGTGCTGGAGAGCTTCAAGGTCAGCTTCCTGAGCGCTCTCGAGGAGTAC ACTAAGAAGCTCAACACCCAGTGA >chr22_random_2|SGP_v1.0_predicted_protein_2|268_AA MKAAVLTLAVLFLTGSQARHFWQQDEPPQSPWDRVKDLATVYVDVLKDSGRDYVSQFEGS ALGKQLNLKLLDNWDSVTSTFSKLREQLGPVTQEFWDNLEKETEGLRQEMSKDLEEVKAK VQPYLDDFQKKWQEEMELYRQKVEPLRAELQEGARQKLHELQEKLSPLGEEMRDRARAHV DALRTHLAPYSDELRQRLAARLEALKENGGARLAEYHAKATEHLSTLSEKAKPALEDLRQ GLLPVLESFKVSFLSALEEYTKKLNTQ* # Gene 3 (Reverse). 2 exons. 39 aa. Score = 0.93 Terminal 20042 20072 -3.29 - 1 0 0.00 4.99 1.84 -9.80 AA 29: 39 chr22_random_3 First 20219 20304 4.22 - 0 2 1.50 -0.20 13.48 -30.10 AA 1: 29 chr22_random_3 >chr22_random_3|SGP_v1.0_predicted_cDNA_3|117_NN ATGCAGGGCTACATGAAGCACGCCACCAAGACCGCCAAGGATGCACTGAGCAGCGTGCAG GAGTCCCAGGTGGCCCAGCAGGCCAGGGCCTTTGTCAGGCTGCTGCGGGAGAGATGA >chr22_random_3|SGP_v1.0_predicted_protein_3|39_AA MQGYMKHATKTAKDALSSVQESQVAQQARAFVRLLRER* # Gene 4 (Forward). 5 exons. 274 aa. Score = 134.02 First 27917 27965 6.34 + 0 1 1.91 4.32 7.78 -17.15 AA 1: 17 chr22_random_4 Internal 28323 28449 14.76 + 2 2 2.50 1.97 12.78 10.44 AA 17: 59 chr22_random_4 Internal 29227 29254 -5.05 + 1 0 4.56 -0.53 1.61 -9.80 AA 59: 68 chr22_random_4 Internal 29498 30100 123.08 + 0 0 -2.95 -0.84 95.39 50.45 AA 69:269 chr22_random_4 Terminal 31761 31775 -5.11 + 0 0 3.17 0.00 1.74 -4.20 AA 270:274 chr22_random_4 >chr22_random_4|SGP_v1.0_predicted_cDNA_4|822_NN ATGTTCCTGAAGGCCGTGGTCCTGACCCTGGCCCTGGTGGCTGTCGCCGGAGCCAGGGCT GAGGTCAGTGCTGACCAGGTGGCCACAGTGATGTGGGACTACTTCAGCCAGCTGAGCAAC AATGCCAAGGAGGCCGTGGAACATCTCCAGAAATCTGAACTCACCCAGCAACTCAATGCC CTCTTCCAGGACAAACTTGGAGAAGCCGAGCAGCTGCGGCGCCAGCTGACCCCCTACGCA CAGCGCATGGAGAGAGTGCTGCGGGAGAACGCCGACAGCCTGCAGGCCTCGCTGAGGCCC CACGCCGACGAGCTCAAGGCCAAGATCGACCAGAACGTGGAGGAGCTCAAGGGACGCCTT ACGCCCTACGCTGACGAATTCAAAGTCAAGATTGACCAGACCGTGGAGGAGCTGCGCCGC AGCCTGGCTCCCTATGCTCAGGACACGCAGGAGAAGCTCAACCACCAGCTTGAGGGCCTG ACCTTCCAGATGAAGAAGAACGCCGAGGAGCTCAAGGCCAGGATCTCGGCCAGTGCCGAG GAGCTGCGGCAGAGGCTGGCGCCCTTGGCCGAGGACGTGCGTGGCAACCTGAGGGGCAAC ACCGAGGGGCTGCAGAAGTCACTGGCAGAGCTGGGTGGGCACCTGGACCAGCAGGTGGAG GAGTTCCGACGCCGGGTGGAGCCCTACGGGGAAAACTTCAACAAAGCCCTGGTGCAGCAG ATGGAACAGCTCAGGCAGAAACTGGGCCCCCATGCGGGGGACGTGGAAGGCCACTTGAGC TTCCTGGAGAAGGACCTGAGGGACAAGGCCACACTCTATTAA >chr22_random_4|SGP_v1.0_predicted_protein_4|274_AA MFLKAVVLTLALVAVAGARAEVSADQVATVMWDYFSQLSNNAKEAVEHLQKSELTQQLNA LFQDKLGEAEQLRRQLTPYAQRMERVLRENADSLQASLRPHADELKAKIDQNVEELKGRL TPYADEFKVKIDQTVEELRRSLAPYAQDTQEKLNHQLEGLTFQMKKNAEELKARISASAE ELRQRLAPLAEDVRGNLRGNTEGLQKSLAELGGHLDQQVEEFRRRVEPYGENFNKALVQQ MEQLRQKLGPHAGDVEGHLSFLEKDLRDKATLY* # Gene 5 (Reverse). 7 exons. 104 aa. Score = 8.41 Terminal 108474 108477 -4.96 - 1 0 0.00 5.02 0.00 -0.35 AA 103:104 chr22_random_5 Internal 108532 108588 2.90 - 1 2 3.51 4.31 2.05 3.91 AA 84:103 chr22_random_5 Internal 117119 117205 8.60 - 1 2 1.65 5.10 7.21 5.26 AA 55: 84 chr22_random_5 Internal 118890 118936 2.50 - 0 2 0.50 3.30 6.21 3.85 AA 40: 55 chr22_random_5 Internal 124832 124869 3.51 - 2 0 2.72 5.88 1.91 1.90 AA 27: 39 chr22_random_5 Internal 126401 126460 2.62 - 2 1 3.65 3.47 2.41 5.41 AA 7: 27 chr22_random_5 First 134611 134629 -6.76 - 0 1 1.81 0.98 0.93 -6.65 AA 1: 7 chr22_random_5 >chr22_random_5|SGP_v1.0_predicted_cDNA_5|312_NN ATGACCACGCGGGGACAAGGTGCAGTGGCTTCTATGTTTTGGGTTGATGCTGAATTAGGG AGTGATATTTACCTTGATGGTATCATAACTATTGTGGATTCAAAATATGGATTAAAACAT TTAACAGAAGAGAAACCTGATGGCCTTATCAATGAAGCTACTAGGCAAGTTGCTTTGGCA GATATCGTTCTCATTAATAAAACAGACTTGGTTCCAGAAGAAGATGTAAAGAAATTAAGA ACAACAATTAGAGTTGATCTCTCTAATGTATTAGATCTTCATGCCTTTGATAGTCTCTCT GGAATAAGTTAA >chr22_random_5|SGP_v1.0_predicted_protein_5|104_AA MTTRGQGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALA DIVLINKTDLVPEEDVKKLRTTIRVDLSNVLDLHAFDSLSGIS* # Gene 6 (Forward). 2 exons. 95 aa. Score = 1.62 First 148422 148535 -2.24 + 0 0 0.60 1.26 10.22 -39.90 AA 1: 38 chr22_random_6 Terminal 182449 182619 3.86 + 0 0 2.62 0.00 6.75 16.56 AA 39: 95 chr22_random_6 >chr22_random_6|SGP_v1.0_predicted_cDNA_6|285_NN ATGGCACAAGTTGCAGTTTCCACCCTGCCCATTGAAGATGAGGAGTCTGTTGAAGATGAT GAGTCCTTGGAGAGCAGGATGGTGGTGACATTCCTGCCAGCTCTCGAGTCCACGGTGCAG CACCGTTTTGAATTTGAATACCAGACCAAAGTGGATGGTGACATAATCCTTCATCTTTAT GACAAAGGAGGAATTGAGCAAACAATTTGTATGTTGGATAGTGTGTTTACATTTGTTTTA CTGGATTCTGCTAACAAGAAACTGTTCCTGGGCAGAGATACATAA >chr22_random_6|SGP_v1.0_predicted_protein_6|95_AA MAQVAVSTLPIEDEESVEDDESLESRMVVTFLPALESTVQHRFEFEYQTKVDGDIILHLY DKGGIEQTICMLDSVFTFVLLDSANKKLFLGRDT* # Gene 7 (Forward). 7 exons. 388 aa. Score = 55.16 First 193112 193203 -5.38 + 0 2 1.15 2.73 3.91 -32.20 AA 1: 31 chr22_random_7 Internal 197974 198151 17.66 + 1 0 2.40 1.63 15.47 15.04 AA 31: 90 chr22_random_7 Internal 203290 203339 -5.38 + 0 2 -0.32 3.28 4.35 -17.50 AA 91:107 chr22_random_7 Internal 205989 206044 3.83 + 1 1 2.51 4.92 6.41 -19.60 AA 107:126 chr22_random_7 Internal 212973 213003 2.68 + 2 2 4.65 4.27 2.72 -10.85 AA 126:136 chr22_random_7 Internal 236688 236762 0.80 + 1 2 2.80 5.51 4.15 -26.25 AA 136:161 chr22_random_7 Terminal 239632 240313 40.95 + 1 0 -3.14 0.00 40.70 12.81 AA 161:388 chr22_random_7 >chr22_random_7|SGP_v1.0_predicted_cDNA_7|1164_NN ATGCACTTGACCCTGAGGACATCAGGTACCAGGCCCGCCAGCTCACACCATCATCGGAGC CGCAGCTGCAGTCTAGACGTGGTGCACCGGCAACAGGCTGTCCATTGCCAGGAAGAGGCT TGCACTGTTATTCTGCTGGAACATGGCACCAATCCAAACCTTAAGGATATCTACCGCAAC ACTGCTCTCCATTATGCTGTGTATAGTGAGAGCACCTCACTGGCAGAAAAACTGCATTTC CATGGTGCAAATATTGAAGCACTGGACAAGACGTGTGGACGAGATGCAGAAGATTACACT ATTTCTCATCATTTGACAAAAATTCAACAACAAATTTTGGAACGTAAAAAGAAGATACTT AAAAAGGAGAAACGAGATGTTGAAATTTCTGATGAATCTGCAGTCAGATTAACCAAACAA AGAAAGATTGGGAAAATGTATCCTCAGCAATTTCCCAAGAAACTGAAGGAAGAGCACGAT AGAAAAACAAATGCTGCCCTTGTAAAGTATATAAAACTCAATGAGGAATTGATAACAAAA ACAGCATTCTGGTATCAACAAGAGCTTAATGATGTCAAAGCTGAGAATACAAGGCTCAAT TCCGAACTGTTGAAGGAAGAAGAAAGCAACAAAAGACTGGAAGCTGAAACTGAATCTTAT CAGTCTAGACTGGCTGCTACTATAAGTAAACACAGTGAAAGTGTGAAAACAGAAAGAAAC CTAAAACTTGCTTTAGAGAGAACGCAAGATGTTTCCGTACAAGTAAAAATGAGTTCTGAT ATTTCCGAAGTAGAAGATAAGAATGAGTTTCTTACTGAACAACTTTCTAAAACACAAAAT AAATTCAATACCTTAAAAGATAAGTTCCGTAAGACAAGAGATACTCTCAGAAAAAAGTCA TTGGCTTCAGAAACTGTACAAAACGACCTAAGCCAAACACAGCAGCAAATAAAGGAAATG AAAGAGATGTATCAAAATGCAGAAGCTAAAGTGGGTAATTCCACTGGAAAGTGGAGCTGT GTAGAAGAGAGGATATGTCAATTCCAACATGAAAATCCGTGCATTGAACAGCAACTAGAT GATGTTCATCAGAAAGAGTATCATAAAGAGATAGTAACTAATATCCAAAGAGGCTTTATT GAGAGTGGAAAGACCTCGTGCTAG >chr22_random_7|SGP_v1.0_predicted_protein_7|388_AA MHLTLRTSGTRPASSHHHRSRSCSLDVVHRQQAVHCQEEACTVILLEHGTNPNLKDIYRN TALHYAVYSESTSLAEKLHFHGANIEALDKTCGRDAEDYTISHHLTKIQQQILERKKKIL KKEKRDVEISDESAVRLTKQRKIGKMYPQQFPKKLKEEHDRKTNAALVKYIKLNEELITK TAFWYQQELNDVKAENTRLNSELLKEEESNKRLEAETESYQSRLAATISKHSESVKTERN LKLALERTQDVSVQVKMSSDISEVEDKNEFLTEQLSKTQNKFNTLKDKFRKTRDTLRKKS LASETVQNDLSQTQQQIKEMKEMYQNAEAKVGNSTGKWSCVEERICQFQHENPCIEQQLD DVHQKEYHKEIVTNIQRGFIESGKTSC* # Gene 8 (Forward). 2 exons. 137 aa. Score = 23.20 First 249234 249344 -3.51 + 0 0 -2.17 2.62 6.43 -7.99 AA 1: 37 chr22_random_8 Internal 256595 256894 26.71 + 0 0 1.94 5.10 20.98 -1.03 AA 38:137 chr22_random_8 >chr22_random_8|SGP_v1.0_predicted_cDNA_8|411_NN ATGACAATAAATATGTTAAATGTATTTGGAAATGAAGACTTTGTTTGCCATGAAGACTTA AAAACAGATCAACTAAAAATGGATATTCTGATTAAGAAGCTAAAACAGAAGTTTGATGAT CTTATGGCAGAGGAGGAAGCTGTATCTTCAAAATGTGTCAATTTGTCTAAAGACAATCAA GTTATCCAACAGGAGTTATTATCTATGAAAAAAGTACAACAAGAATGTGAAAAACTTGAG GAGAATCAAAAGATGTTGGAAGAAGAAATATTAAATCTTAAGACACATATGGAAAACAGT ATGGTAGAACTTAGTAAACTACAAGAATATAAATCAGAGCTAGATGAAAGGGCAATGCAG GCAGTAGAAAAATTAAAAGAAATCCATTTACAGGTTACTTGTTTAAATCAG >chr22_random_8|SGP_v1.0_predicted_protein_8|137_AA MTINMLNVFGNEDFVCHEDLKTDQLKMDILIKKLKQKFDDLMAEEEAVSSKCVNLSKDNQ VIQQELLSMKKVQQECEKLEENQKMLEEEILNLKTHMENSMVELSKLQEYKSELDERAMQ AVEKLKEIHLQVTCLNQ