## date Fri Jun 9 11:12:06 2006 ## source-version: geneid v 1.2 -- geneid@imim.es # Sequence chr16_random - Length = 105485 bps # Optimal Gene Structure. 4 genes. Score = 269.95 # Gene 1 (Reverse). 1 exons. 191 aa. Score = 20.15 Single 42893 43465 20.15 - 0 0 0.00 1.02 15.51 46.59 AA 1:191 chr16_random_1 >chr16_random_1|SGP_v1.0_predicted_cDNA_1|573_NN ATGCTGGTCCTGGCCACCCTGGCTGCGCTCTTCATCCTCACCACCGCTGTGTTGGCTGAA CGCCTGTTCCGCCGTGCTCTCCGCCCAGACCCCAGCCACCGTGCACCCACCCTGGTGTGG CGCCCAGGAGGAGAGCTGTGGATTGAGCCCATGGGCACCGCCCGAGAGCGCTCTGAGGAC TGGTATGGCTCTGCGGTCCCCCTGCTGACAGATCGGGCCCCTGAGCCTCCCACCCAGGTG GGCACTTTGGAGGCCCGAGCAACAGCCCCACCTGCCCCCTCAGCCCCAAATTCTGCTCCC AGCAACTTGGGCCCCCAGACCGTACTGGAGGTCCCAGCCCGGAGCACCTTCTGGGGGCCC CAGCCCTGGGAGGGGAGGCCCCCCGCCACAGGCCTGGTGAGCTGGGCTGAACCCGAGCAG AGGCCAGAGGCCAGCGTCCAGTTTGGGAGCCCCCAGGCCAGGAGGCAGCGGCCAGGGAGC CCGGATCCTGAGTGGGGCCTCCAGCCACGGGTCACCTTGGAGCAGATCTCAGCTTTCTGG AAGCGTGAAGGCCGGACCAGTGTGGGGTTCTGA >chr16_random_1|SGP_v1.0_predicted_protein_1|191_AA MLVLATLAALFILTTAVLAERLFRRALRPDPSHRAPTLVWRPGGELWIEPMGTARERSED WYGSAVPLLTDRAPEPPTQVGTLEARATAPPAPSAPNSAPSNLGPQTVLEVPARSTFWGP QPWEGRPPATGLVSWAEPEQRPEASVQFGSPQARRQRPGSPDPEWGLQPRVTLEQISAFW KREGRTSVGF* # Gene 2 (Forward). 3 exons. 156 aa. Score = 45.39 First 73460 73478 -7.28 + 0 1 2.75 0.30 0.26 -6.65 AA 1: 7 chr16_random_2 Internal 78122 78254 12.53 + 2 2 3.47 2.62 10.10 7.69 AA 7: 51 chr16_random_2 Terminal 78721 79036 40.14 + 1 0 4.46 0.00 28.27 34.95 AA 51:156 chr16_random_2 >chr16_random_2|SGP_v1.0_predicted_cDNA_2|468_NN ATGAGGGCGTTCTTCCAAGTTCAGGCCAGGTCTTCCTCCTATAGTGGAGAGTATGGAAGT GGTGGTGGAAAGCGATTCTCTCATTCTGGCAACCAGTTGGACGGCCCCATCACCGCCCTC CGGGTCCGAGTCAACACATACTACATCGTAGGTCTTCAGGTGCGCTATGGCAAGGTGTGG AGCGACTATGTGGGTGGTCGCAACGGAGACCTGGAGGAGATCTTTCTGCACCCTGGGGAA TCAGTGATCCAGGTTTCTGGGAAGTACAAGTGGTACCTGAAGAAGCTGGTATTTGTGACA GACAAGGGCCGCTATCTGTCTTTTGGGAAAGACAGTGGCACAAGTTTCAATGCCGTCCCC TTGCACCCCAACACCGTGCTCCGCTTCATCAGTGGCCGGTCTGGTTCTCTCATCGATGCC ATTGGCCTGCACTGGGATGTTTACCCCACTAGCTGCAGCAGATGCTGA >chr16_random_2|SGP_v1.0_predicted_protein_2|156_AA MRAFFQVQARSSSYSGEYGSGGGKRFSHSGNQLDGPITALRVRVNTYYIVGLQVRYGKVW SDYVGGRNGDLEEIFLHPGESVIQVSGKYKWYLKKLVFVTDKGRYLSFGKDSGTSFNAVP LHPNTVLRFISGRSGSLIDAIGLHWDVYPTSCSRC* # Gene 3 (Forward). 6 exons. 291 aa. Score = 76.69 First 89398 89467 3.53 + 0 1 3.23 2.11 7.73 -24.50 AA 1: 24 chr16_random_3 Internal 95545 95740 4.75 + 2 2 3.51 0.66 11.08 -24.99 AA 24: 89 chr16_random_3 Internal 97022 97149 12.65 + 1 1 7.95 2.00 5.25 12.51 AA 89:132 chr16_random_3 Internal 97241 97395 12.92 + 2 0 4.39 4.03 6.89 14.31 AA 132:183 chr16_random_3 Internal 97623 97832 26.95 + 0 0 3.42 4.03 16.72 24.92 AA 184:253 chr16_random_3 Terminal 97912 98025 15.90 + 0 0 5.22 0.00 13.26 6.92 AA 254:291 chr16_random_3 >chr16_random_3|SGP_v1.0_predicted_cDNA_3|873_NN ATGGCCGCGGGCGGCTCGACGCAGCAGAGGCGACGCGAGATGGCGGCAGCTTCAGCGGCG GCGATCTCAGGAGCTGGTCGCTGTCGGCTAAGCAAGATTGGAGCTACTCGTCGTCCACCT CCAGCTCGCGTAAGGGTGGCTGTGCGACTGCGGCCATTTGTGGATGGAACAGCGGGAGCA AGTGATCCCCCCTGTGTGCGGGGCATGGACAGCTGCTCTCTAGAGATTGCTAACTGGAGG AACCACCAGGAGACTCTCAAATACCAGTTTGATGCCTTCTATGGGGAGAGGAGTACTCAG CAGGACATCTATGCAGGTTCAGTGCAGCCCATCCTAAGGCACTTGCTGGAAGGGCAGAAT GCCAGTGTGCTTGCCTATGGACCCACAGGAGCTGGGAAGACGCACACAATGCTGGGCAGC CCAGAGCAACCTGGGGTGATCCCGCGGGCTCTCATGGACCTCCTGCAGCTCACAAGGGAG GAGGGTGCCGAGGGCCGGCCATGGGCCCTTTCTGTCACCATGTCTTACCTAGAGATCTAC CAGGAGAAGGTATTAGACCTCCTGGACCCTGCTTCGGGAGACCTGGTAATCCGAGAAGAC TGCCGGGGGAATATCCTGATTCCGGGTCTCTCCCAGAAGCCCATCAGTAGCTTTGCTGAT TTTGAGCGGCACTTCCTGCCAGCCAGTCGAAATCGGACTGTAGGAGCCACCCGGCTCAAC CAGCGCTCCTCCCGCAGTCATGCTGTGCTCCTGGTCAAGGTGGACCAGCGGGAACGTTTG GCCCCATTTCGCCAGCGAGAGGGAAAACTCTACCTGATTGACTTGGCTGGGTCAGAGGAC AACCGGCGCACAGGCAACAAGGCCTTCGGCTAA >chr16_random_3|SGP_v1.0_predicted_protein_3|291_AA MAAGGSTQQRRREMAAASAAAISGAGRCRLSKIGATRRPPPARVRVAVRLRPFVDGTAGA SDPPCVRGMDSCSLEIANWRNHQETLKYQFDAFYGERSTQQDIYAGSVQPILRHLLEGQN ASVLAYGPTGAGKTHTMLGSPEQPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIY QEKVLDLLDPASGDLVIREDCRGNILIPGLSQKPISSFADFERHFLPASRNRTVGATRLN QRSSRSHAVLLVKVDQRERLAPFRQREGKLYLIDLAGSEDNRRTGNKAFG* # Gene 4 (Forward). 6 exons. 382 aa. Score = 127.72 First 101438 101584 18.03 + 0 0 4.21 5.23 9.40 9.72 AA 1: 49 chr16_random_4 Internal 102096 102255 2.73 + 0 1 3.07 2.33 4.09 5.00 AA 50:103 chr16_random_4 Internal 102645 102712 -0.06 + 2 0 2.96 1.71 6.84 -23.80 AA 103:125 chr16_random_4 Internal 103461 103673 27.72 + 0 0 4.35 0.20 20.78 20.31 AA 126:196 chr16_random_4 Internal 103762 103821 5.23 + 0 0 3.45 1.73 6.02 3.30 AA 197:216 chr16_random_4 Internal 104775 105274 74.08 + 0 2 -2.89 -0.35 75.81 -70.63 AA 217:382 chr16_random_4 >chr16_random_4|SGP_v1.0_predicted_cDNA_4|1148_NN ATGGACCCGGCCATGCTGGAGCGCCTCCTCAGCTTGGACCGTCTGCTTGCCTCCCAGGGG AGCCAGGGGGCCCCTCTGTTGAGTACCCCAAAGCGAGAGCGGATGGTGCTAATGAAGACA GTAGAAGAGAAGGACCTAGAGATTGAGAGGCTTAAGACGAAGCAAAAAGAACTGGAGGCC AAGATGTTGGCCCAGAAGGCTGAGGAAAAGGAGAACCATTGTCCCACAATGCTCCGGCCC CTTTCACATCGCACAGTCACAAGGGCAAAGCCCCTGAAAAARGCTGTGGTGATGCCCCTA CAGCTAATTCAGGAGCAGGCAGCATCCCCAAATGCCGAGATCCACATCCTGAAGAATAAA GGCCGGAAGAGAAAGCTGGAGTCCCTGGATGCCCTAGAGCCTGAGGAGAAGGCTGAGGAC TGCTGGGAGCTACAGATCAGCCCGGAGCTACTGGCTCATGGGCGCCAAAAAATACTGGAT CTGCTGAACGAAGGCTCAGCCCGAGATCTCCGCAGTCTTCAGCGCATTGGCCCGAAGAAG GCCCAGCTAATCGTGGGCTGGCGGGAGCTCCACGGCCCCTTCAGCCAGGTGGAGGACCTG GAACGCGTGGAGGGCATAACGGGGAAACAGATGGAGTCCTTCCTGAAGAAGAAGACAAAG AGCAAGGGGCCCTACATCTGCGCTCTGTGCGCCAAGGAGTTCAAGAACGGCTACAATCTC CGGAGGCACGAAGCCATCCACACGGGAGCCAAGGCCGGCCGGGTCCCCTCGGGTGCTATG AAGATGCCGACCATGGTGCCCCTGAGCCTCCTGAGCGTGCCCCAGCTGAGCGGAGCCGGC GGGGGAGGGGGAGAGGCGGGTGCCGGCGGCGGCGCTGCCGCAGTGGCCGCCGGTGGCGTG GTGACCACGACCGCCTCGGGGAAGCGCATCCGGAAGAACCATGCCTGCGAGATGTGTGGC AAGGCCTTCCGCGACGTCTACCACCTGAACCGACACAAGCTGTCGCACTCGGACGAGAAG CCCTACCAGTGCCCGGTGTGCCAGCAGCGCTTCAAGCGCAAGGACCGCATGAGCTACCAC GTGCGCTCACATGACGGCGCTGTGCACAAGCCCTACAACTGCTCCCACTGTGGCAAGAGC TTCTCCCG >chr16_random_4|SGP_v1.0_predicted_protein_4|382_AA MDPAMLERLLSLDRLLASQGSQGAPLLSTPKRERMVLMKTVEEKDLEIERLKTKQKELEA KMLAQKAEEKENHCPTMLRPLSHRTVTRAKPLKXAVVMPLQLIQEQAASPNAEIHILKNK GRKRKLESLDALEPEEKAEDCWELQISPELLAHGRQKILDLLNEGSARDLRSLQRIGPKK AQLIVGWRELHGPFSQVEDLERVEGITGKQMESFLKKKTKSKGPYICALCAKEFKNGYNL RRHEAIHTGAKAGRVPSGAMKMPTMVPLSLLSVPQLSGAGGGGGEAGAGGGAAAVAAGGV VTTTASGKRIRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYH VRSHDGAVHKPYNCSHCGKSFSg