## date Wed Apr 19 15:18:09 2006 ## source-version: geneid v 1.2 -- geneid@imim.es # Sequence chr7_random - Length = 549659 bps # Optimal Gene Structure. 13 genes. Score = 72.28 # Gene 1 (Reverse). 3 exons. 125 aa. Score = 3.80 Terminal 2266 2489 0.75 - 2 0 0.00 3.37 10.69 0.00 AA 51:125 chr7_random_1 Internal 6673 6772 1.91 - 0 1 4.74 3.03 7.00 0.00 AA 18: 51 chr7_random_1 First 8948 8998 1.14 - 0 0 1.84 4.91 5.22 0.00 AA 1: 17 chr7_random_1 >chr7_random_1|geneid_v1.2_predicted_cDNA_1|375_NN ATGCGGACGCTGCTGCCTCCCGCGCTGCTGACCTGCTGGCTGCTCGCCCCCGTGAACAGC ATTCACCCAGAATGCCGATTTCATCTGGAAATACAGGAGGAAGAAACAAAATGTGCAGAG CTTCTGAGGTCTCAAACAGAAAAACACAAAGAGGAAACCAGACAGTGTCCACAAATGGGT TCTTGCTCACAGCGTCATGTGGGCACTGACCCTCCTCGGAGGGTCCAAGGCCCTGTGTGG CTGCAGCATTCCACCTCGCTCTGTGGTCTCGGCTCAGCTGCCCTGCGATGCTGCCCTCTG CTGCGGGAGCTGGAGCTCTGGTGGGAGCTCGCTGTTCGTGGTCCTCAGCAGATATTCAAG GCAGACCTGTTCTAA >chr7_random_1|geneid_v1.2_predicted_protein_1|125_AA MRTLLPPALLTCWLLAPVNSIHPECRFHLEIQEEETKCAELLRSQTEKHKEETRQCPQMG SCSQRHVGTDPPRRVQGPVWLQHSTSLCGLGSAALRCCPLLRELELWWELAVRGPQQIFK ADLF* # Gene 2 (Reverse). 2 exons. 172 aa. Score = 2.26 Terminal 24251 24556 0.26 - 0 0 0.00 1.52 10.88 0.00 AA 71:172 chr7_random_2 First 57193 57402 1.99 - 0 0 2.42 -0.57 14.72 0.00 AA 1: 70 chr7_random_2 >chr7_random_2|geneid_v1.2_predicted_cDNA_2|516_NN ATGAACCTCCAGCATAATCCTTTCCATGTCATTGTCTTCCTGGGAGCCAAGTCTGTGAAG CCCACACCAGCAGTGGTAAAACAGAACAGATACTGGGATGTCATCTTGGAGCTCAGTCAC CTGCCACCAGAGACAGGTGCCTACTGCAAGGTGAAGCAGCGACTGGCCCTGGCACAAGGA GCCACACCAGCATCAAAACTTGGACCAGAGGGAATTCCAGTGCTTTCCAGCAGCCACTCA CACATCAAATGCTTGCCCTCAGGATCAGACAACGTGGAGAAACCACATCCTGCTCCCCAG GCCTTCAATGCCCAGGCAACCTTGGACAACAATGGCTTTGAGACCTCACCTTGCAGTGCA ACCGTGGACAATGCGTCCTCCACAGGACCCTCCCTCCCAGCGACTGTGCGGGTCGTGGCA GCTGAGAGCAGCGCTGCACTGTTGGGTCACCCTCTCAGCTTGCTGAGACCTGTTAAAGTA AAAATTTGGGCCTTGGTTTACATTTTTAACAGCTAA >chr7_random_2|geneid_v1.2_predicted_protein_2|172_AA MNLQHNPFHVIVFLGAKSVKPTPAVVKQNRYWDVILELSHLPPETGAYCKVKQRLALAQG ATPASKLGPEGIPVLSSSHSHIKCLPSGSDNVEKPHPAPQAFNAQATLDNNGFETSPCSA TVDNASSTGPSLPATVRVVAAESSAALLGHPLSLLRPVKVKIWALVYIFNS* # Gene 3 (Reverse). 1 exons. 82 aa. Score = 3.15 Single 76043 76288 3.15 - 0 0 0.00 1.46 18.17 0.00 AA 1: 82 chr7_random_3 >chr7_random_3|geneid_v1.2_predicted_cDNA_3|246_NN ATGATGTCGTACATGATGGTGTTCAGGTCTACACTGGAGGATGCTGTCGTACATGGTGGT GTTCATGGGCCACACTGGAGGATGCTGCTGTACATGATGGTGTTCAGGTCTACACTGGAG GATGCTGTCGTACATGGTGGTGTTCATGGGCCACACTGGAGGATGCTGCTGTACATGATG GTGTTCAGGTCTACACTGGAGGATGATGTCGTACATGGTGGTGTTCGGGGCCACACTGGA GGATGA >chr7_random_3|geneid_v1.2_predicted_protein_3|82_AA MMSYMMVFRSTLEDAVVHGGVHGPHWRMLLYMMVFRSTLEDAVVHGGVHGPHWRMLLYMM VFRSTLEDDVVHGGVRGHTGG* # Gene 4 (Forward). 2 exons. 247 aa. Score = 8.54 First 98624 98913 2.16 + 0 2 3.19 1.07 11.51 0.00 AA 1: 97 chr7_random_4 Terminal 98989 99439 6.38 + 1 0 2.18 0.00 25.18 0.00 AA 97:247 chr7_random_4 >chr7_random_4|geneid_v1.2_predicted_cDNA_4|741_NN ATGGCCGTCGGTCTCCTCAGGGCCTCCTCGGCGGTCAGTTTTTCATCCTTTGATCCAGGG GTCGCTTCCTGTACCTCGTCCTCAGCATCTGGAATCCAGAGACCTATGGCGTCTGAGGTG CCTTGTGCCTCGGGCATACCCATCAAGAAAATAGGCCATCGAGGTGTTGATTCCTCAGGA GAGACAACCTATAGAAAGACGACCTCATCAGCCTTGAAATGTGCCATCCAGTTGTGCATT ACTCACACTGTGGGGAGCCTGGATCCCACACCAGAGCGTCATGTCCTCATTGAGTTTCCT TTCAAGACCTATACACCTGTTGCCTTCTGCTACTTTCAGGAGCTATTTGGTATCTGCCCT GATGATGACTTGTACTCCCTCTGCAGTGAGCCACTGATTGAACTCAGTAGCTCTGGAGCT GATGGTTCCCTGTTACATGTGTCCATCCACAATGAATTCATTATTAAAACAGTCCAACAT AAACAGGCGGAGTTTCTGCAGAAGCTGATTCCAGGATACCACATCGACCTCAACCAGAAC TCTTGGACTTTGCTGCCTAAATTCTATGGACTGTGCTGTGTGAAGGCAGGTGGCAAGAAC ACGCAGATTGCGGTGATGAAGAATCTCTTACTAAGACTGGTCAAAATGCATACCAAATAT GACTTCAAAAGTTCAACCTACAAAGAGCAGGCTTCCCAGAAAGAGCAAGAGAAGCCTCTT CCCACATTTTCCCACATTTAA >chr7_random_4|geneid_v1.2_predicted_protein_4|247_AA MAVGLLRASSAVSFSSFDPGVASCTSSSASGIQRPMASEVPCASGIPIKKIGHRGVDSSG ETTYRKTTSSALKCAIQLCITHTVGSLDPTPERHVLIEFPFKTYTPVAFCYFQELFGICP DDDLYSLCSEPLIELSSSGADGSLLHVSIHNEFIIKTVQHKQAEFLQKLIPGYHIDLNQN SWTLLPKFYGLCCVKAGGKNTQIAVMKNLLLRLVKMHTKYDFKSSTYKEQASQKEQEKPL PTFSHI* # Gene 5 (Reverse). 1 exons. 74 aa. Score = 3.46 Single 163516 163737 3.46 - 0 0 0.00 0.59 20.27 0.00 AA 1: 74 chr7_random_5 >chr7_random_5|geneid_v1.2_predicted_cDNA_5|222_NN ATGCCCATCCTGAAGGCCACCGTGGCCTTCTATGATGCAGTCCACGCAGGAAATCCACGA GAAAGTTCTAAACAGAGCCGTGGGCCCCATGATGCACCACACAATCACCTCACCAGGGAG GTTCTGGCAAATTTCAAGTCCTTGAGAGTGATCGTGGGGGTGGGCAGTGGCTATGACAAC GTGGACATCAAGGCTGCCAGCGAGCTCGGAATTGCTGTGTGA >chr7_random_5|geneid_v1.2_predicted_protein_5|74_AA MPILKATVAFYDAVHAGNPRESSKQSRGPHDAPHNHLTREVLANFKSLRVIVGVGSGYDN VDIKAASELGIAV* # Gene 6 (Reverse). 1 exons. 96 aa. Score = 5.46 Single 167645 167932 5.46 - 0 0 0.00 2.29 24.10 0.00 AA 1: 96 chr7_random_6 >chr7_random_6|geneid_v1.2_predicted_cDNA_6|288_NN ATGGAGCAGCTCAACAGGATCCTGCTGCACCTGGAGTCAGAGCTATCCCAAAACCGGGAA GAGAGGTACCACGCCCAAGAGCACGAGGACCTGTGGAACATCAAGGTCGAGCTGGAGGCT GAGATTGCCACTTACTGCCGCCTGCTAGAAGACGGGGAGGATTTCAATCTCCTGGATGCT CTGGACAGCAGTAAATACCTGCAAGCTATCCAAAAGAACAGCCCCCGCAGGATAGTGGAC GGGAAAGTGGTGTCTGAGACCAACAATACAGACTTTTTGTTGTGCTAA >chr7_random_6|geneid_v1.2_predicted_protein_6|96_AA MEQLNRILLHLESELSQNREERYHAQEHEDLWNIKVELEAEIATYCRLLEDGEDFNLLDA LDSSKYLQAIQKNSPRRIVDGKVVSETNNTDFLLC* # Gene 7 (Forward). 3 exons. 166 aa. Score = 1.67 First 215958 216058 1.22 + 0 2 4.06 3.67 5.33 0.00 AA 1: 34 chr7_random_7 Internal 217110 217215 -2.43 + 1 0 3.83 0.67 1.05 0.00 AA 34: 69 chr7_random_7 Terminal 242640 242930 2.87 + 0 0 2.76 0.00 15.55 0.00 AA 70:166 chr7_random_7 >chr7_random_7|geneid_v1.2_predicted_cDNA_7|498_NN ATGACCGACATGAAAGTAGAATGTCATCATGTCAGGCTGTACCAGCGTTGGAAGACTAAA CACTGTGGGGAAGAACCTCCCTTATGGAATATTATCAACAGCTATGGCCTAGGTATGAAC ATGACAGGTACACAAGAGTTCCAACACCCGACAATCTACTTCAGTCCAAGAAGAGTGCCC TCCCTCTTGCTCCCCATCCAACTCATGCATGTTGGCAAGTCAAGTTCCCCCACTGAGTTC TCCACACATAAGGAGGGAGTCAACACCATTGCTAAGTCGGATCAGCTCAAGGGTCTCCAG TATCAGTTTTATCAGATCCCAGGGACCTGCCTGCTCCCAGAGGTGACAGAGAAAAATCAA GGAACGATCTGTATGGTCACTGACATGGATGAAACCCTTGTGCATAGCTCCATTAAGCCA ATCAGCAATGCTGACTGCCTAGTGACTGTAAAGATTGAGGGGACCATGAGGCCTTATATG GATGAGTTCCTGAGATGA >chr7_random_7|geneid_v1.2_predicted_protein_7|166_AA MTDMKVECHHVRLYQRWKTKHCGEEPPLWNIINSYGLGMNMTGTQEFQHPTIYFSPRRVP SLLLPIQLMHVGKSSSPTEFSTHKEGVNTIAKSDQLKGLQYQFYQIPGTCLLPEVTEKNQ GTICMVTDMDETLVHSSIKPISNADCLVTVKIEGTMRPYMDEFLR* # Gene 8 (Forward). 2 exons. 47 aa. Score = 1.09 First 253667 253672 -0.46 + 0 0 2.48 3.98 1.66 0.00 AA 1: 2 chr7_random_8 Terminal 258571 258705 1.55 + 0 0 1.57 0.00 14.01 0.00 AA 3: 47 chr7_random_8 >chr7_random_8|geneid_v1.2_predicted_cDNA_8|141_NN ATGGCGGTCACCATTGGAGAAGATGCTCAGGAAGAACAAGAAGCTGCAGTCAACCCTGCT GAAGGTGGCATATGGGTCCAGGCTCTTGAGCTGGTCTTCGACATGGTACATGTGGATGCA GGCTTTGAGCAGTGTGAGTAG >chr7_random_8|geneid_v1.2_predicted_protein_8|47_AA MAVTIGEDAQEEQEAAVNPAEGGIWVQALELVFDMVHVDAGFEQCE* # Gene 9 (Reverse). 1 exons. 82 aa. Score = 1.51 Single 306032 306277 1.51 - 0 0 0.00 2.56 12.44 0.00 AA 1: 82 chr7_random_9 >chr7_random_9|geneid_v1.2_predicted_cDNA_9|246_NN ATGTCGGATCAGCTCCAGCGTCTCCAATATCAGTTTTATCAGATCCCAGGAACCTGCCTG CTCCCAGAGGTGACAGAGAAAAATCAAGGAAGGATCTGTATGGTCACTGACCTGGATGAA ACCCTTGTGCATAGCTCCTTTAAGCCAATCAGCAATGCTGACTGCCTAGTGCCTGTAGAG CTTGAGGGGACCATGCACCAGATCCATGTGCTCATGAGGCCTTATATGGATGAGTTCCTG ACATGA >chr7_random_9|geneid_v1.2_predicted_protein_9|82_AA MSDQLQRLQYQFYQIPGTCLLPEVTEKNQGRICMVTDLDETLVHSSFKPISNADCLVPVE LEGTMHQIHVLMRPYMDEFLT* # Gene 10 (Forward). 2 exons. 137 aa. Score = 1.08 First 395956 396010 -3.07 + 0 1 -1.37 2.12 3.70 0.00 AA 1: 19 chr7_random_10 Terminal 396477 396832 4.15 + 2 0 1.02 0.00 21.34 0.00 AA 19:137 chr7_random_10 >chr7_random_10|geneid_v1.2_predicted_cDNA_10|411_NN ATGCTAAAATTCGAGTTGGAGATTCCTGAGGTGTCCACTACAAATGTATACAAAACCAAA GAAACGAGCCTGAGGCTGGATTTTGGAGGCTGGACACTCCAACGAACCTCAAGCGGCCCT GGAGATCATGTCAACAAGGCTCACGGCCCGGCAACTGGGAGCGAGTATTGCATTCATCGC TTCTTTCCTCACTTCCGAAGTGCAAGTGTACAGTCTGTGTGCAGGTCCAAACCCATTAGT GATGCCCTCCCGTTCGATGGAGACGATTACAGGGACCTTCGACAGGACCTGGCAGATCTG AATGGATCTGTGATGGCTGAATTCCAACATTTGTTGCAGCAGAAAGCCATGTCATTTCAT GAGCGAGTCTTAGCTTGGATGCTTGCACGAAATGGATATTCCGCATCGTGA >chr7_random_10|geneid_v1.2_predicted_protein_10|137_AA MLKFELEIPEVSTTNVYKTKETSLRLDFGGWTLQRTSSGPGDHVNKAHGPATGSEYCIHR FFPHFRSASVQSVCRSKPISDALPFDGDDYRDLRQDLADLNGSVMAEFQHLLQQKAMSFH ERVLAWMLARNGYSAS* # Gene 11 (Reverse). 2 exons. 165 aa. Score = 2.33 Terminal 397740 398208 4.45 - 1 0 0.00 6.62 13.70 0.00 AA 9:165 chr7_random_11 First 398751 398776 -2.12 - 0 2 -1.07 4.69 1.76 0.00 AA 1: 9 chr7_random_11 >chr7_random_11|geneid_v1.2_predicted_cDNA_11|495_NN ATGGCGAGTGACGCAGGACCGGTTAATGTTTACTCTATGACCGTTCGGTCCGCACAAGCC TCGTCTGTTCAATCAAGTTCAACACGGGATACCAATAACCCCAATCGCCCTTCGATATAC ATCCTGATCAGCTTCAAAAGTAACGCTCTCCCCCTTTTCCCCAATCTGTCGATGCTGCAG GAGAAAGCCATCAACGCTCGCACCCTGCTGGACGGAACATGTACAGTACATGCGCATACA AATGGTTCTTGCCCACTGTTCCTGGTAGTACTCATCGGAAACGTTTCCTTTCAGTCTAGT GGGAAGCTTTCGGTTTTATACAACATACATACTGTATATACACTTCATGCCACAAATGAC TGCCTCAGCAAATGCCGCAGTTCACAAGTAGAGCAAGAGGAATCAACTGTGCTGGAAATG TGCTCTAGGTTGTTTTTGTTCGCCATTGTCATCCTCCTCCTTTGCGGTGAAAGAAAGCCA ATTCTGCACTATTAA >chr7_random_11|geneid_v1.2_predicted_protein_11|165_AA MASDAGPVNVYSMTVRSAQASSVQSSSTRDTNNPNRPSIYILISFKSNALPLFPNLSMLQ EKAINARTLLDGTCTVHAHTNGSCPLFLVVLIGNVSFQSSGKLSVLYNIHTVYTLHATND CLSKCRSSQVEQEESTVLEMCSRLFLFAIVILLLCGERKPILHY* # Gene 12 (Forward). 7 exons. 251 aa. Score = 14.33 First 405182 405226 -3.11 + 0 0 1.17 1.06 1.38 0.00 AA 1: 15 chr7_random_12 Internal 407864 407960 3.98 + 0 1 4.14 2.00 13.23 0.00 AA 16: 48 chr7_random_12 Internal 412899 413003 3.19 + 2 1 4.53 4.76 6.54 0.00 AA 48: 83 chr7_random_12 Internal 414358 414467 0.92 + 2 0 2.06 2.59 7.83 0.00 AA 83:119 chr7_random_12 Internal 448567 448627 3.86 + 0 1 4.80 2.29 11.50 0.00 AA 120:140 chr7_random_12 Internal 453758 453879 6.53 + 2 0 3.43 3.87 17.87 0.00 AA 140:180 chr7_random_12 Terminal 455804 456016 -1.03 + 0 0 0.74 0.00 8.82 0.00 AA 181:251 chr7_random_12 >chr7_random_12|geneid_v1.2_predicted_cDNA_12|753_NN ATGTTCCAGCTGCCTCCCACCCTGGGCGCGCGTCTCAGGGGCTACGAAGCCGAGATCCCC CGCGAGGTGATCGAGAGGCTGGCCCGCAGTCAGATCCACAGCATCCGGGACCTCCAGCGA CTCCTGGAGATAGACTCCGTAGGGAGTGAGGATTCTTTGGACACCAGCCTGAGAGCTCAC GGGGTCCATGCCACTAAGCATGTGCCCGAGAAGCGGCCCCTGCCCATTCGGAGGAAGAGA AGCATCGAGGAAGCTGTCCCCGCTGTCTGCAAGACCAGGACGGTCATTTACGAGATTCCT CGGAGTCAGGTCGACCCCACGTCCGCCAACTTCCTGATCTGGCCCCCGTGCGTGGAGGGC AGCACGCTGAGGAAACGCAAGATGTACGAGGAGTTCCTCAGCAAGGTCTCCATCCTAGAG TCCCTGGAGAAGTGGGAGCGTCTGACCGTGGCGGATGCGCTGGAGCCCGTCCAGTTTGAA GATGGAGAGAAAATTGTGGTCCAGGGAGAGCCTGGGGACGACTTTTACATCATCACGGAG CTGTGGGCAGTGACGAGGATCATTTTGGGTCCAGAAGGAGGGCACCTCTCTGCCCTGGGG GCTGCTGGAAAGAAACAGGAGGTCAGCAAAGAGCTCAAGTCCCAGTGGATGTTTGGCAAC TTCGGCAAATTCGGGAGCCAGTGTCTTGGTTCGAAACAACAGAAGCCCAGCAATGCGGCT GGGGCCGCTGATGGAGTTGGACGGGGCCGCTGA >chr7_random_12|geneid_v1.2_predicted_protein_12|251_AA MFQLPPTLGARLRGYEAEIPREVIERLARSQIHSIRDLQRLLEIDSVGSEDSLDTSLRAH GVHATKHVPEKRPLPIRRKRSIEEAVPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEG STLRKRKMYEEFLSKVSILESLEKWERLTVADALEPVQFEDGEKIVVQGEPGDDFYIITE LWAVTRIILGPEGGHLSALGAAGKKQEVSKELKSQWMFGNFGKFGSQCLGSKQQKPSNAA GAADGVGRGR* # Gene 13 (Reverse). 6 exons. 192 aa. Score = 23.61 Terminal 496023 496195 7.24 - 2 0 0.00 4.21 24.29 0.00 AA 135:192 chr7_random_13 Internal 496982 497063 4.35 - 0 1 4.76 3.48 11.03 0.00 AA 108:135 chr7_random_13 Internal 518691 518849 10.59 - 0 0 2.93 4.61 27.66 0.00 AA 55:107 chr7_random_13 Internal 528738 528784 1.64 - 2 0 1.96 5.82 4.92 0.00 AA 39: 54 chr7_random_13 Internal 529936 529997 1.63 - 1 1 4.49 3.72 4.25 0.00 AA 18: 39 chr7_random_13 Internal 544896 544948 -1.84 - 0 2 0.94 3.40 1.38 0.00 AA 1: 18 chr7_random_13 >chr7_random_13|geneid_v1.2_predicted_cDNA_13|576_NN CCTCAGGCAGACATTTCTAACATACAGAAATGCAGATTGTTGGAGCGGGAGGATGACATA TTCGATGCCATGTTCCCTGTCACTCACATCGCTGGGGAGACTGTTATACAGCAAGGGAAT GAAGGAGACAACTTCTATGTCGTTGATCAAGGGGAAGTGGATGTGTACGTGAACGGAGAG TGGGTGACCAACATCAGCGAGGGAGGCAGCTTCGGGGAGCTGGCGCTCATCTACGGCACC CCCAGGGCTGCGACCGTGAAAGCCAAGACGGACCTCAAGCTCTGGGGGATCGACCGGGAC AGCTACCGGCGCATCCTTATGGGCACCGCGTCCGTGCTGCAGCGCCGGTCCCCCAATGAG GAGTACGTGGAGGTGGGGCGCCTGGGACCCTCTGACTACTTCGGGGAGATTGCACTGCTG CTGAACCGGCCCCGGGCGGCCACTGTCGTGGCCCGGGGGCCCCTCAAGTGTGTGAAGCTG GACCGGCCCCGCTTCGAGCGTGTGCTGGGGCCCTGCTCTGAGATCCTCAAGAGGAACATT CAGCGTTACAACAGCTTCATCTCCCTCACCGTCTGA >chr7_random_13|geneid_v1.2_predicted_protein_13|192_AA PQADISNIQKCRLLEREDDIFDAMFPVTHIAGETVIQQGNEGDNFYVVDQGEVDVYVNGE WVTNISEGGSFGELALIYGTPRAATVKAKTDLKLWGIDRDSYRRILMGTASVLQRRSPNE EYVEVGRLGPSDYFGEIALLLNRPRAATVVARGPLKCVKLDRPRFERVLGPCSEILKRNI QRYNSFISLTV*