## date Thu Apr 20 17:42:13 2006 ## source-version: geneid v 1.2 -- geneid@imim.es # Sequence chr6_cox_hap1 - Length = 4731698 bps # Optimal Gene Structure. 164 genes. Score = 3955.94 # Gene 1 (Reverse). 3 exons. 712 aa. Score = 38.33 Internal 1138 2630 28.45 - 2 0 3.38 7.10 69.29 0.00 AA 215:712 chr6_cox_hap1_1 Internal 5767 5989 2.48 - 0 1 2.44 3.86 10.61 0.00 AA 141:215 chr6_cox_hap1_1 First 12787 13206 7.40 - 0 0 3.89 2.66 21.18 0.00 AA 1:140 chr6_cox_hap1_1 >chr6_cox_hap1_1|geneid_v1.2_predicted_cDNA_1|2136_NN ATGGAAGCAGTCTCTAGGGTCTTCCCAGCCTTGGCTGGCCAGGCTCCAGAAGAACAAGGG GAGATTATCAAAGTAAAGGTTAAAGAAGAAGACCACACTTGGGATCAGGAATCAGCCCTA CGTAGGAATTTGTCTTATACCAGGGAACTCTCTCGTCAGCGCTTCAGGCAGTTCTGCTAT CAGGAGACACCTGGGCCCAGGGAGGCTCTGAGTCAACTGCGGGAACTTTGCCGTCAGTGG CTGAACCCAGAGATACATACCAAGGAGCAGATCCTGGAATTGTTGGTGCTGGAGCAGTTC CTGACCATCCTGCCTGAGGAGCTCCAGTCTTGGGTGCGGGAGCATAATCCTGAGAGTGGA GAAGAGGTGGTGACTTTGCTGGAAGATTTGGAGAGGGAGCTTGATGAACCTAGACAGCAG TGGAAGAATACAAGTTTAGCTATGACAAACTACAATTATTTGTATTGTTTACCAAATGCA CCTACTTGTCCACAGGTCTCACAGGGCACATATGGGCAGGAAGTTTCTATGGAAGAAATG ATCCCTCTGGATTCTGCAAAGGAGTCTTTAGGCACCCAGCTTCAGTCTATGGAAGATAGA ATGGAATGTGAATCTCCAGAGCCACACCCACTTCAAGATAATGGGTCATTTTTGTGGTTT TCCATGATGTCTCAAAGCATGGGTGGTGATAACCTCAGTAGCTTAGATACTAATGAAGCA GAAATTGAACCAGAAAACATGAGAGAAAAGTTCTTCAGAAGCTTAGCAAGGTTACTGGAA AACAAAAGTAATAATACTAAGATATTTTCTAAAGCAAAGTACTGTCAGTTGATAAAGGAA GTGAAAGAAGCTAAAGCTAAGGCGAAAAAGGAATCAGTTGACTACCGTCGCTTGGCTAGA TTTGATGTTATCCTTGTACAAGGAAATGAGAAGCTAATTGAGGCTGTAAATGGGGAAACA GATAAAATACGGTATTACTTACACAGTGAGGACTTATTTGACATTCTGCATAATACACAT CTCAGCATTGGACATGGTGGACGTACTCGCATGGAGAAAGAGTTACAAGCGAAATACAAG AACATCACAAAAGAAGTTATAATGCTGTATCTGACCCTCTGTAAACCATGCCAACAGAAA AATTCAAAACTCAAGAAGGTTCTAACATCAAAATCAATTAAGGAAGTTAGTTCAAGATGC CAAGTAGATCTTATAGACATGCAGTTGAATCCTGATGGGGAGTACAGATTTATTTTGCAT TATCAAGATCTCTGTACAAAGTTAACTTTTTTACGGTCATTAAAGTCTAAAAGGCCTACG GAAGTTGCACATGCTCTTTTAGATATATTTACAATTATTGGAGCACCCAGTGTCCTACAA TCTGACAATGGGAGGGAATTTTCAAGCCAGGTTGTCAGTGAACTCAGTAATATTTGGCCA GAATTGAAAATTGTCCATGGGAAGTCTCAGACCTGCCAAAGCCAGAGTTCTGCAGAACAA ACTGAGGATATCCGAAAGAGGATTTTCTCCTGGATGCAAACTAACAACTCATCACACTGG ACTGAATTTTTGTGGTTCATTCAGATGTCCCAAAATCAGCCCTATCACAGAAGCATGCAA CAGACTCCATGTGAAAGTGCATTTAGCTCTGAAGCTAAACTGGGCTTGTCCCATTCTCAG CTAACTGAAGAACTTGTTGCCAGCTTGCATACAGAAAATGAATTAGATCAGGCTGACAAA GAGTTAGAAAATACTTTAAGAGCCCAGTATGAAGAAAACATTGAGACTGGAACAGACAGT AGTGATATTGAAGAGAATCTTTCTGTCACTCCTAAGGTGGCTGAAAAAAGCCCTCCTGAG AGCAGACTAAGATTTTTATCCTGTGTAGTTTGTGAAAAAGAATGCACAGGTGTTAATAGT TGTATATCATGTGATGGAAATATCCATGCAATTTGTGGAGTGCCCTCTCAACATGGGACT GAGGGCTGTGGTCGGCAAATAACTTGTAGCCTTTGCTATGAAACCAGCACAATGAAAAGG AAACATGATGAGATTCAAAGAAGTTTGCCTGTTAAACCTTCCAAAATGCTAAAGCCATCA GGGACACCATTTTCACCAGACAAAGTAGGAGATTGG >chr6_cox_hap1_1|geneid_v1.2_predicted_protein_1|712_AA MEAVSRVFPALAGQAPEEQGEIIKVKVKEEDHTWDQESALRRNLSYTRELSRQRFRQFCY QETPGPREALSQLRELCRQWLNPEIHTKEQILELLVLEQFLTILPEELQSWVREHNPESG EEVVTLLEDLERELDEPRQQWKNTSLAMTNYNYLYCLPNAPTCPQVSQGTYGQEVSMEEM IPLDSAKESLGTQLQSMEDRMECESPEPHPLQDNGSFLWFSMMSQSMGGDNLSSLDTNEA EIEPENMREKFFRSLARLLENKSNNTKIFSKAKYCQLIKEVKEAKAKAKKESVDYRRLAR FDVILVQGNEKLIEAVNGETDKIRYYLHSEDLFDILHNTHLSIGHGGRTRMEKELQAKYK NITKEVIMLYLTLCKPCQQKNSKLKKVLTSKSIKEVSSRCQVDLIDMQLNPDGEYRFILH YQDLCTKLTFLRSLKSKRPTEVAHALLDIFTIIGAPSVLQSDNGREFSSQVVSELSNIWP ELKIVHGKSQTCQSQSSAEQTEDIRKRIFSWMQTNNSSHWTEFLWFIQMSQNQPYHRSMQ QTPCESAFSSEAKLGLSHSQLTEELVASLHTENELDQADKELENTLRAQYEENIETGTDS SDIEENLSVTPKVAEKSPPESRLRFLSCVVCEKECTGVNSCISCDGNIHAICGVPSQHGT EGCGRQITCSLCYETSTMKRKHDEIQRSLPVKPSKMLKPSGTPFSPDKVGDW # Gene 2 (Forward). 1 exons. 51 aa. Score = 0.00 Single 42652 42804 0.00 + 0 0 1.63 0.00 10.06 0.00 AA 1: 51 chr6_cox_hap1_2 >chr6_cox_hap1_2|geneid_v1.2_predicted_cDNA_2|153_NN ATGGCCGTTACCGTTCTACTCGTCCTCATCCGGGACTGCGCTGACCTTCTGGCCGTTAAA GCCGTTATCCACTGTTATCAGGACCAGGTAGTCTCGCCCAACTGGGACAGAGCGGTCGCC CGAGGACCGGATCTGCGCGGCGCAGTGGCCTAA >chr6_cox_hap1_2|geneid_v1.2_predicted_protein_2|51_AA MAVTVLLVLIRDCADLLAVKAVIHCYQDQVVSPNWDRAVARGPDLRGAVA* # Gene 3 (Reverse). 1 exons. 72 aa. Score = 1.25 Single 59859 60074 1.25 - 0 0 0.00 5.56 8.66 0.00 AA 1: 72 chr6_cox_hap1_3 >chr6_cox_hap1_3|geneid_v1.2_predicted_cDNA_3|216_NN ATGCCTCGCCTACCCGGGCTCTGTCCTCAACTCTGCCACCACCGCTGCGTGGCCCTGCTC GCCCTGCAGCCCGACCCCTGCCTTGCCCATTCTGAGCCTCCGCGCCAGCCCATGTATGCC ATGGAAATATGGCTGTTGGAATTCTGGTGTTTTACGACCTTCTTAACACCGTCTGCGTAT GTGCTAAGCAGTCTGAGCCAGTTCAGAAAGGAGTAA >chr6_cox_hap1_3|geneid_v1.2_predicted_protein_3|72_AA MPRLPGLCPQLCHHRCVALLALQPDPCLAHSEPPRQPMYAMEIWLLEFWCFTTFLTPSAY VLSSLSQFRKE* # Gene 4 (Forward). 6 exons. 361 aa. Score = 6.81 First 61218 61272 -2.23 + 0 1 -0.51 1.91 4.83 0.00 AA 1: 19 chr6_cox_hap1_4 Internal 94755 94790 1.24 + 2 1 4.73 3.71 4.32 0.00 AA 19: 31 chr6_cox_hap1_4 Internal 120709 120819 0.96 + 2 1 5.77 1.53 3.95 0.00 AA 31: 68 chr6_cox_hap1_4 Internal 122673 122692 -1.35 + 2 0 1.17 3.92 2.86 0.00 AA 68: 74 chr6_cox_hap1_4 Internal 142467 142738 0.09 + 0 2 4.63 3.02 2.62 0.00 AA 75:165 chr6_cox_hap1_4 Terminal 159542 160130 8.10 + 1 0 2.42 0.00 29.11 0.00 AA 165:361 chr6_cox_hap1_4 >chr6_cox_hap1_4|geneid_v1.2_predicted_cDNA_4|1083_NN ATGAGAACCAACATGGGTTGTGCTTCTCGGATTCAGGCCAAAGTTCTCTGCGCCGATGAT ACCAAGTTGAATCCTTATGCAGGAGGAGATGATCAGAGCTTCGGCGATGGAAAAGCAGCT GTCGGTCCTGGCCGTGTAACCACCCCAGATTTGCCAGACACACGCTGTCGCTCTGCATTT CAGGCCAGGTTTTGTGAATTCTGTCCACTTGCCGGCGACTCGATAAATGAAATATTTTCT GCAAACATCCATTATCATCAGAAGACACCCCATGTGGAAGAAGCAAATTATTTTTGTGTT AAAATGGATATTATCAACTGCAAAGAAAAAGGTGAATATTTCACAAGTGAGCCAGAACAT TTACAGTGTAAACAAGAGCAGTTGCTACCTTTGCTTTTTTTTTCCCACTTCTTCAATATG ATCACCATGCTTTTCATTACCCTGCTACTCAGTATTTCTAGTCAACTGACTGATATTTTT AAAGGTTTTCAAAGGAATACTGGCCAGAGGGCAGTGCTGAAATTTGCTGCTGCCACTGGA GCCACTCCAATTGCTGGCTGCTTCACTCCTGGAACCTTCACTAGCCAGATCCAGGCAGCC TTCCGAGAGCCACGGCTTCCTGTGGTTACTGACCCCAGGGTTGACCACCAGCCTTTAATG GAGGCATCTTATGTTAACCTACCTACCATTGCTCTGTGTAACACAGATTCTCCTCTGTGC TATGTGGATATTGCCATTCCATGCAACAACAAAGGAGCTCACTCAGTGGGTGTGATGTGG TGGATGTTGGTCCCAGAAGTTCGGCGCATAAGTTGCACCATTTCCCGTGAACACCCGTGG GAGGTCATGACTGATCCCTGCTTCTACAGAGATCCCGAAGAGATTGAAAAAGAAAAGCAA GCTGCTGCTGAAAAGGCTGTGACCAACGAGGAATTTCAGGGTGAATGGACTGCACCAGCT CCTCAGTTCACTGCTACCCAGCCTGAGGTTGCAGACAGGTCTGAAGGCCTGCAGGTGCCG TCTGTGCCTATCCAGCAGTTACCTACTGAAGACTGGAGCGCTCAGCCTGACACAGAAGAC TGA >chr6_cox_hap1_4|geneid_v1.2_predicted_protein_4|361_AA MRTNMGCASRIQAKVLCADDTKLNPYAGGDDQSFGDGKAAVGPGRVTTPDLPDTRCRSAF QARFCEFCPLAGDSINEIFSANIHYHQKTPHVEEANYFCVKMDIINCKEKGEYFTSEPEH LQCKQEQLLPLLFFSHFFNMITMLFITLLLSISSQLTDIFKGFQRNTGQRAVLKFAAATG ATPIAGCFTPGTFTSQIQAAFREPRLPVVTDPRVDHQPLMEASYVNLPTIALCNTDSPLC YVDIAIPCNNKGAHSVGVMWWMLVPEVRRISCTISREHPWEVMTDPCFYRDPEEIEKEKQ AAAEKAVTNEEFQGEWTAPAPQFTATQPEVADRSEGLQVPSVPIQQLPTEDWSAQPDTED * # Gene 5 (Reverse). 1 exons. 100 aa. Score = 4.14 Single 210944 211243 4.14 - 0 0 0.00 0.25 22.47 0.00 AA 1:100 chr6_cox_hap1_5 >chr6_cox_hap1_5|geneid_v1.2_predicted_cDNA_5|300_NN ATGGAAGACCCATCTATCTCTTTCTCCAAACCCAAGAAAAAGAAATCTTTTTCCAAGGAG GAGTTGATGAGTAGCGATCTTGAAGAGACCGCTGGCAGCACCAGTCTTCCCAAGAGGAAG AAGTCTTCACCCAAGGAGGAAACAGTTAATGACACCGAAGAGTCAGGCCACAGAAGTGGC TCCAAGAAAACGAGGAAATTCTCCAAAGAGGAGCTGGTCAGCAGTGGGCCTGAAGAGGCG GCTGGCAAGAGCAGCTCCAAGAAGAAGAAAAAGTTCCATAAAGCATCCCAGGAAGATTAG >chr6_cox_hap1_5|geneid_v1.2_predicted_protein_5|100_AA MEDPSISFSKPKKKKSFSKEELMSSDLEETAGSTSLPKRKKSSPKEETVNDTEESGHRSG SKKTRKFSKEELVSSGPEEAAGKSSSKKKKKFHKASQED* # Gene 6 (Reverse). 4 exons. 453 aa. Score = 7.58 Terminal 221642 221915 0.18 - 1 0 0.00 -0.58 15.20 0.00 AA 362:453 chr6_cox_hap1_6 Internal 241282 241604 1.10 - 0 2 2.72 2.94 6.76 0.00 AA 255:362 chr6_cox_hap1_6 Internal 252493 252877 5.38 - 1 0 5.16 0.45 18.90 0.00 AA 126:254 chr6_cox_hap1_6 First 265882 266258 0.92 - 0 2 4.82 1.14 5.86 0.00 AA 1:126 chr6_cox_hap1_6 >chr6_cox_hap1_6|geneid_v1.2_predicted_cDNA_6|1359_NN ATGCGCGTGTTGAGTGTATACCGCCCTCGTATCGTTTTCTGCCAATCGGGACCGGACCGG GAGCGGATTCTGCCCGAAAGGGGGCGCGATCTGGCGGGTGCTCCTCTTCCTCGCTCCCCA GTCCGCGCCTCGCTGGGCTCAGCACCCCGGCCCCCGGCGGGACGGAGGCTCGGGTCCAAA GCAGTGGCTGCACCGACACGAACCCGTCTGCGTTTCTCCACCTGTCTTCCCTCGCCACCT GCATCTACTATGGTCTCTAAATGCCTCGCTTTGTACTTTGTGGCTTTCTGGCAGCCCTTT AAAGCAGCGGTGAAAGAAAGGAGAGAGTCAAGACACGGGAGAAAATGTTTCATCCCGGGT TCTTCTAGTGGTGCCCGGAAACATGTGGAGCAAACAAACGGGAACTTTCTTTCTCATCTT CTGCATTTCAAGCCTAATAAAATTAGACGTTTCCACTGTCCTGCTCAGTCTCGAAGCTGT CGGCAGATTCCGCTTTTAACTCTCAACACAGACACTCAGGAAATCGGGAAATCCCTGCAG CTCCCTCAGAAGCTATCAGTATCAGCGGTTCCCGAACCCGCAAACAAAAAACGCAACATC ACGTGCTCCTCCAAAGAGCCTAGCCTGTCTATCGAGCGATGGAAAGAGCGGCGAGGCGCT CTCGCAGCCGTGGCAGTCTGGACGAAAAGAACCAGGTCCCTTTCCTGGTCTAGCCTACCT CCCTACCTCTCTTCCCTCATATCCAGAAGAAGCGACGGAGAGGGAATGAGCCCTCTCGCT TATCGCGGACAGCGAGGAAAAGCAGCGGAGATGGGCTTCTGGGCTGCACTCCGCCTTCCG GCCCACCCAGATCCTCTGGCAGCCTCGGGCGCTCGCCCACTTCGCTTCTCCTCCGCCTTT GCCGCCGCCGCCGCAGGTGCGCACCCCACCGCGTCCCTGCTTCCCTCTCGAACTCTTTTC GAAGGTGGTCCTCGTTCTCCTCTCCATCCATCGTTTCTTGAGTGTCAGAACTGGAGCCAT AGCGTCCCCAAGACGAAATCCATGCTGGGTTTCGCGACCATGGTGCTGGCCCAGGCGCTG GCAGGAGAAATATGTGGAGCAAACAAACGGAAACTTTCTTTCTCATCTTTTGCATTTCAA GCAAAAACTAATAAAATTAGATGTTTCCACCGTCATGCTCAGTTTCGAAGCTGCCAGCAG ATCCCGCTTCTAACTTTTAACACAGGCACGCAGGAAATCGGGAAATCCCTGCAGCTCCCT CAGAAGCTACAGTATCAGCGGTTCCTGAAGGGCAAACCAAAACCCAGTATCACTCTCTCC TCCAAAGAGTTCAGCCGGTCTGCTGAGCGACGGAAATAG >chr6_cox_hap1_6|geneid_v1.2_predicted_protein_6|453_AA MRVLSVYRPRIVFCQSGPDRERILPERGRDLAGAPLPRSPVRASLGSAPRPPAGRRLGSK AVAAPTRTRLRFSTCLPSPPASTMVSKCLALYFVAFWQPFKAAVKERRESRHGRKCFIPG SSSGARKHVEQTNGNFLSHLLHFKPNKIRRFHCPAQSRSCRQIPLLTLNTDTQEIGKSLQ LPQKLSVSAVPEPANKKRNITCSSKEPSLSIERWKERRGALAAVAVWTKRTRSLSWSSLP PYLSSLISRRSDGEGMSPLAYRGQRGKAAEMGFWAALRLPAHPDPLAASGARPLRFSSAF AAAAAGAHPTASLLPSRTLFEGGPRSPLHPSFLECQNWSHSVPKTKSMLGFATMVLAQAL AGEICGANKRKLSFSSFAFQAKTNKIRCFHRHAQFRSCQQIPLLTFNTGTQEIGKSLQLP QKLQYQRFLKGKPKPSITLSSKEFSRSAERRK* # Gene 7 (Reverse). 2 exons. 209 aa. Score = 7.84 Terminal 288492 288948 6.86 - 1 0 0.00 1.36 28.99 0.00 AA 57:209 chr6_cox_hap1_7 First 290437 290606 0.98 - 0 2 1.81 0.52 11.44 0.00 AA 1: 57 chr6_cox_hap1_7 >chr6_cox_hap1_7|geneid_v1.2_predicted_cDNA_7|627_NN ATGAAAGACAAAATGAAAGAGGCCGCGGAAGCACAGACTGGCAGAATTCCAAAACCCGAA AAACAAGCAAGGCACCAAATTAACAAGCCCAATCACATTGGTTACATTTCCCAGTATTAT CGAAGATCAAGCAAGAAAGAAAAAGACAGAAAACAAATGCGAAACCACAGAACTGTCTCC CTTCTTGGGGGCCGAGGGCTTTCTGGGGAAGAGGATGAGTTTGGAGCAATACTCATTCAG ACGCTGCACATTGGCCTGCAGGGAATCGGTGGACTTGTTCTGCCTCCTCGGATCCACAGA GATGCCAGTGGTCCGGGTCACCTTCTTGTGAATGCCCGCCACCCTGAGCTCCAGGCTGAA GCCTCTGCCGGCGCGCACCTTGATGTGATAACGCACAGCAGGGCACAGCACAATGGGCCA GATGGGTCCCGACTCTCCGGGCGCGGGGCGATGCAGCGCCCTTTGGCTTGCCGGGCCTTG ATTCTGCGGATCTTCTGGTTGAACCACGTGGCCACACGCTGCTGCCAGTCCTTGTGGAAG TGGGGCTTCAACATCATGCCATTCCTGCTGGGCGCCATGGCTGCCTACGGCCCTCCTACG AAGGAAACACTTTATAGATTTCTATAG >chr6_cox_hap1_7|geneid_v1.2_predicted_protein_7|209_AA MKDKMKEAAEAQTGRIPKPEKQARHQINKPNHIGYISQYYRRSSKKEKDRKQMRNHRTVS LLGGRGLSGEEDEFGAILIQTLHIGLQGIGGLVLPPRIHRDASGPGHLLVNARHPELQAE ASAGAHLDVITHSRAQHNGPDGSRLSGRGAMQRPLACRALILRIFWLNHVATRCCQSLWK WGFNIMPFLLGAMAAYGPPTKETLYRFL* # Gene 8 (Reverse). 1 exons. 111 aa. Score = 2.52 Single 324061 324393 2.52 - 0 0 0.00 1.50 17.91 0.00 AA 1:111 chr6_cox_hap1_8 >chr6_cox_hap1_8|geneid_v1.2_predicted_cDNA_8|333_NN ATGTGGTGCACCCCCCTTAAAAACTACCGCTGTGTTCCCCGACCTGGCAGTGGTCACTTG GAGCCCATTAATCGGGAACATCCGAGAGCGACAAGGAAGGCCGCGGGCGAGCGCGTCGCT CCCGGAGTTTCCCCGGACCTGGGATCGCCGATCCCTCGGCGCGGACACCAGCCTTGCCCA TGTGGTGGTCCCTGTGGAGACCTTCCCAGCCGTTCCCGGCTACCACTTTTAGAGCCCAAG ACAAACTTCGACGAGTGGCAAGGCAGTGACAAATGGAACCAAAATAGAGGGGCTAAAAGG GGACCTTCCTATAGAACCGGGGTCTTTTGTTAG >chr6_cox_hap1_8|geneid_v1.2_predicted_protein_8|111_AA MWCTPLKNYRCVPRPGSGHLEPINREHPRATRKAAGERVAPGVSPDLGSPIPRRGHQPCP CGGPCGDLPSRSRLPLLEPKTNFDEWQGSDKWNQNRGAKRGPSYRTGVFC* # Gene 9 (Reverse). 8 exons. 514 aa. Score = 38.30 Terminal 331378 331973 2.59 - 2 0 0.00 4.53 12.18 0.00 AA 316:514 chr6_cox_hap1_9 Internal 334544 334570 0.23 - 2 1 4.08 5.63 -0.12 0.00 AA 307:316 chr6_cox_hap1_9 Internal 336112 336144 0.56 - 2 1 2.28 5.73 3.27 0.00 AA 296:307 chr6_cox_hap1_9 Internal 336277 336392 0.84 - 1 1 2.16 4.00 6.73 0.00 AA 257:296 chr6_cox_hap1_9 Internal 339003 339025 0.78 - 0 2 1.38 8.43 1.10 0.00 AA 250:257 chr6_cox_hap1_9 Internal 347324 347554 7.44 - 0 0 4.71 3.01 19.53 0.00 AA 173:249 chr6_cox_hap1_9 Internal 349204 349299 1.75 - 0 0 3.32 3.59 7.89 0.00 AA 141:172 chr6_cox_hap1_9 First 350525 350944 24.12 - 0 0 3.70 5.73 58.66 0.00 AA 1:140 chr6_cox_hap1_9 >chr6_cox_hap1_9|geneid_v1.2_predicted_cDNA_9|1542_NN ATGGCCTCCGGGAGTGTGGCCGAGTGCCTGCAGCAGGAGACCACCTGCCCCGTGTGCCTG CAGTACTTCGCAGAGCCCATGATGCTCGACTGCGGCCATAACATCTGTTGCGCGTGCCTC GCCCGCTGCTGGGGCACGGCAGAGACTAACGTGTCGTGCCCGCAGTGCCGGGAGACCTTC CCGCAGAGGCACATGCGGCCCAACCGGCACCTGGCCAACGTGACCCAACTGGTGAAGCAG CTGCGCACCGAGCGGCCGTCGGGGCCCGGCGGCGAGATGGGCGTGTGCGAGAAGCACCGC GAGCCCCTGAAGCTGTACTGCGAGGAGGACCAGATGCCCATCTGCGTGGTGTGCGACCGC TCCCGCGAGCACCGCGGCCACAGCGTGCTGCCGCTCGAGGAGGCGGTGGAGGGCTTCAAG GAGCAAATCCAGAACCAGCTCGACCATTTAAAAAGAGTGAAAGATTTAAAGAAGAGACGT CGGGCCCAGGGGGAACAGGCACGAGCTGAACTCTTGAGCCTAACCCAGATGGAGAGGGAG AAGATTGTTTGGGAGTTTGAGCAGCTGTATCACTCCTTAAAGGAGCATGAGTATCGCCTC CTGGCCCGCCTTGAGGAGCTAGACTTGGCCATCTACAATAGCATCAATGGTGCCATCACC CAGTTCTCTTGCAACATCTCCCACCTCAGCAGCCTGATCGCTCAGCTAGAAGAGAAGCAG CAGCAGCCCACCAGGGAGCTCCTGCAGGACATTGGGGACACATTGAGCAGGGCTGAAAGA ATCAGGATTCCTGAACCTTGGATCACACCTCCAGATTTGCAAGAGAAAATCCACATTTTT GCCCAAAAATGTCTATTCTTGACGGAGAGTCTAAAGCAGTTCACAGAAAAAATGCAGTCA GATATGGAGAAAATCCAAGAATTAAGAGAGGCTCAGTTATACTCAGTGGACGTGACTCTG GACCCAGACACGGCCTACCCCAGCCTGATCCTCTCTGATAATCTGCGGCAAGTGCGGTAC AGTTACCTCCAACAGGACCTGCCTGACAACCCCGAGAGGTTCAATCTGTTTCCCTGTGTC TTGGGCTCTCCATGCTTCATCGCCGGGAGACATTATTGGGAGGTAGAGGTGGGAGATAAA GCCAAGTGGACCATAGGTGTCTGTGAAGACTCAGTGTGCAGAAAAGGTGGAGTAACCTCA GCCCCCCAGAATGGATTCTGGGCAGTGTCTTTGTGGTATGGGAAAGAATATTGGGCTCTT ACCTCCCCAATGACTGCCCTACCCCTGCGGACCCCGCTCCAGCGGGTGGGGATTTTCTTG GACTATGATGCTGGTGAGGTCTCCTTCTACAACGTGACAGAGAGGTGTCACACCTTCACT TTCTCTCATGCTACCTTTTGTGGGCCTGTCCGGCCCTACTTCAGTCTGAGTTACTCGGGA GGGAAAAGTGCAGCTCCTCTGATCATCTGCCCCATGAGTGGGATAGATGGGTTTTCTGGC CATGTTGGGAATCATGGTCATTCCATGGAGACCTCCCCTTGA >chr6_cox_hap1_9|geneid_v1.2_predicted_protein_9|514_AA MASGSVAECLQQETTCPVCLQYFAEPMMLDCGHNICCACLARCWGTAETNVSCPQCRETF PQRHMRPNRHLANVTQLVKQLRTERPSGPGGEMGVCEKHREPLKLYCEEDQMPICVVCDR SREHRGHSVLPLEEAVEGFKEQIQNQLDHLKRVKDLKKRRRAQGEQARAELLSLTQMERE KIVWEFEQLYHSLKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLSSLIAQLEEKQ QQPTRELLQDIGDTLSRAERIRIPEPWITPPDLQEKIHIFAQKCLFLTESLKQFTEKMQS DMEKIQELREAQLYSVDVTLDPDTAYPSLILSDNLRQVRYSYLQQDLPDNPERFNLFPCV LGSPCFIAGRHYWEVEVGDKAKWTIGVCEDSVCRKGGVTSAPQNGFWAVSLWYGKEYWAL TSPMTALPLRTPLQRVGIFLDYDAGEVSFYNVTERCHTFTFSHATFCGPVRPYFSLSYSG GKSAAPLIICPMSGIDGFSGHVGNHGHSMETSP* # Gene 10 (Forward). 1 exons. 120 aa. Score = 1.48 Single 366906 367265 1.48 + 0 0 1.09 0.00 15.93 0.00 AA 1:120 chr6_cox_hap1_10 >chr6_cox_hap1_10|geneid_v1.2_predicted_cDNA_10|360_NN ATGGATCCTGGACAGGATGCTGCAGGTGGTGCAGGAGGGGAATCCTGCCCCATTTATCAT CAACACAGTAAAAAGGGGTCGAAGAGACCGAGAGCGCCAGAGGACGCCATGGGCTCCACA TCCACTTGGATTCCAGGAAGTAAGCCTCTCGACTTCAGGAGTAAGCAAGGCCAACCGTTT GGTTTGAGCCTGTTGCTTCTAAGAAAAGCGAGGAAAAATCCTGAGACCTCCTCCCCTCGC CCTTCATCCACTTCAGGGGACCGAGTGTCTCCACGGAACTTCACAAGGGAGGAAAAGAGT GAACTCATTATTATTTGTCTTGTCTTCGTTTCAGAGGCGGTACATCTACGAAAGCCCTAA >chr6_cox_hap1_10|geneid_v1.2_predicted_protein_10|120_AA MDPGQDAAGGAGGESCPIYHQHSKKGSKRPRAPEDAMGSTSTWIPGSKPLDFRSKQGQPF GLSLLLLRKARKNPETSSPRPSSTSGDRVSPRNFTREEKSELIIICLVFVSEAVHLRKP* # Gene 11 (Reverse). 4 exons. 280 aa. Score = 13.98 Terminal 392375 392590 2.94 - 0 0 0.00 -2.04 22.92 0.00 AA 209:280 chr6_cox_hap1_11 Internal 392737 392916 4.12 - 0 0 1.25 -6.01 29.95 0.00 AA 149:208 chr6_cox_hap1_11 Internal 393074 393440 8.47 - 1 0 0.37 1.92 30.25 0.00 AA 26:148 chr6_cox_hap1_11 First 409865 409941 -1.56 - 0 2 -0.04 4.46 1.98 0.00 AA 1: 26 chr6_cox_hap1_11 >chr6_cox_hap1_11|geneid_v1.2_predicted_cDNA_11|840_NN ATGGCCGAACTTGAGGGAGACCACTTTTTGACAGCTTTAACCTTCAAGGACACAGAGCAA GGGTGCCCTCCTGCTAGCAAGAGCTTCACCACTCGCTCCACCTTCTCCACCAACTACCGG TCCCTGGGCTCTGTCCAGGCGCCCAGCTACGGTTCCCAGCCAGTCTGCAGCGCGGCCAGC GTCTATGCAGGCGCCGGGGGCTCTGGTTCCCGGATCTCCGCGTCCCCCTCCACCAGCTTC TGGGGCGGCATGGGGTCTGGAGGCCTGGCGGCAGGGATGGCTGGGGTTCTGGCAGGAATG GGAGGCATCCAGAACGAGAAGGAGACCATGCAAAGCCTGAAGGACCGCCTGGCCTCCTAC CTGGACAGAGTGAGAAGCATGGAGACCAAGAACCGGAAGCTGGAGAGCAAAATCCGGGAG CACCTGGAGAAGAAGGGACGCCAGTCTGTGGAGAGCGACATCCATGGGTTCCGCAAGGTC ATTGATGATACCAATGTCACTCGGCTGCAGCTGGAGACAGAGATCGAGGCTCTCAAGGAG GAGCTGCTCTTCCTGAAGAAGAACCAAGAAGAGGAAGTAAAAGGCCTACAAGCCCAGATT GCCATCTCTGGGTTGACCGTGGAGTCCATCGGTGTTGGAGCTGCTGAGATGACGCTCACG GAGCAGAGATATACAGTCCAGTCCTTGGAGATCGACCTGGACTCCATGAGAAATCTGAAG GCCAGCTTGGAGAACAGCTTGAGGGAGGTGGAGGCCCGCTATGTCCTGCAGATGGAGCAG CTCAGCGGAATCCTGCTGCACCTGGAGTCAGAGCTGACACAGACCGGGGCAGACGGATAG >chr6_cox_hap1_11|geneid_v1.2_predicted_protein_11|280_AA MAELEGDHFLTALTFKDTEQGCPPASKSFTTRSTFSTNYRSLGSVQAPSYGSQPVCSAAS VYAGAGGSGSRISASPSTSFWGGMGSGGLAAGMAGVLAGMGGIQNEKETMQSLKDRLASY LDRVRSMETKNRKLESKIREHLEKKGRQSVESDIHGFRKVIDDTNVTRLQLETEIEALKE ELLFLKKNQEEEVKGLQAQIAISGLTVESIGVGAAEMTLTEQRYTVQSLEIDLDSMRNLK ASLENSLREVEARYVLQMEQLSGILLHLESELTQTGADG* # Gene 12 (Reverse). 4 exons. 594 aa. Score = 60.34 Terminal 418084 419669 57.85 - 2 0 0.00 3.13 153.80 0.00 AA 66:594 chr6_cox_hap1_12 Internal 421817 421921 1.59 - 2 1 5.16 4.17 3.86 0.00 AA 31: 66 chr6_cox_hap1_12 Internal 426596 426677 1.95 - 0 1 3.29 4.01 7.81 0.00 AA 4: 31 chr6_cox_hap1_12 First 427029 427037 -1.04 - 0 0 4.83 1.97 1.07 0.00 AA 1: 3 chr6_cox_hap1_12 >chr6_cox_hap1_12|geneid_v1.2_predicted_cDNA_12|1782_NN ATGCAGGAGGTTGTGCTGTTGGATGAGAGTTCAGGACCACCAAGCCAGCTGCTTTGGACC CGCCAGGATACCCAGCTCCCTCAGGAAAGCGGATTTCCATTTCCTAAACCTCCTTTAATC TCTCATCTGGAGCGAGAAGTAGACCCCTGTGTGCAGGATCCACAGGACAGGGAGTCCCTA AGCTGCTCCTACCCAGTGTCAGCTGACAAGATGTGGCCTGAGAATGAAAAGGCAAGTTCA CAACAAGAGATTTTTGAAAATGGAGAAGCCTACTGGATGAAATTTAACAGTCTCCTAAAA GTTGATTCCCGGGATCCTAAGGTTAGAGAAGTTTGTGTTCAGGATGTCAAATTAGAGAAT CAATGGGAAACATCTATAAGGGAGAAACTGAGAGAAGAGAAAGAAGGCTCTGAGGAAGTG ACCTGCAAAAAAGGAAAGAACCAGAAAGTGCTTAGTAAAAACTTGAATCCAAACTCAAAA CATAGTCAATGTAATAAAGTTCTTATAGCACAGAAACTCCATGAATGTGCCAGGTGTGGC AAAAACTTCAGTTGGCACTCAGATCTAATTCTCCATGAGCAAATTCATTCTGGTGAGAAA CCCCATGTGTGTAATGAGTGTGGGAAAGCATTCAAGACCAGAAATCAGCTTTCTATGCAC CGGATAATCCACACAGGGGAGAAACCTTTTAATTGCACCCAGTGTGGGAAGGCTTTCAAC AGTAGATCAGCTCTTTGCCGACATAAAAAAACCCACAGTGGGGAGAAGCCTCACGAGTGC AGGGACTGTGGGAAGGCCTTCAAGACCAGGAACCGTCTCTGTATGCATCAGCTTATCCAC ACCGGGGAGAAGCCTTACAAATGTAACTGCTGTGGGAAGGCCTTCCAGTTTAAGCATTCC CTTACCATCCATGGCAGAATCCACACTGGGGAGAAGCCATATGAATGTGAGGAGTGCGGG AAGGCCTTCAGTGGGAGTTCAGACCTCACCAAACACATAAGAATCCACACTGGGGAACGA CCTTATGAGTGCAGCAAGTGTGGAAGGGCCTTCAGTCGGAGCTCAGACCTAAGCAAACAC AAACGAATCCATACTCGGGAGAAACACTATGGGTGTCCCCAGTGTGGAAAAGACTTCAGC ATCAAGGCAGAACTCACCAAACACAGAAGGATCCACACTGAAGAGAAACGTTACAGGTGT GAGGAGTGTGGGAAAGCCTTTCGTCATAACTGTAAGCGCAGGGCTCATGAACGAGAGCAT ACAGGGGAGAAGCCCTATCAATGCAGGGATTGTGGGAAAACCTTCCAAGATAAGCACTGC CTTACCATCCATCAGAGAATCCACACTGGAGAGAAACCTTACAAATGTTTAGAGTGTGGG AAAGCTTTCAGTGGGAAGTCAAACTTGACCAATCATCGAAGAATTCACACTGGAGAGAAG CCTCACAAATGTGAGGTATGTGGAATGGCCTTCCATCATAGTTCAGTCCTGAGGCAGCAC AAAAGAATCCACACTGGTGAGAAGCCATACACCTGCAGTGAGTGTGGCACGTCCTTCCGT CAGGGCTCAGCTCTGATTGGACATAAGCGAGTTCATACTGGGGAGAAACCTTATGAATGT GAGGAATGTGGAAAAGCTTTTAGAGTGAGCTCAAATCTTACTGGACATAAGAAAAGAAAA CATCAAGTATGGAGTACCCATGAACTTGATGGGAGTAGGAAATCCCTCTCTCCAGTGACT GTTTCTCAGACCTCAGTAGTCAGTATTTTGACCAGTGCCTGA >chr6_cox_hap1_12|geneid_v1.2_predicted_protein_12|594_AA MQEVVLLDESSGPPSQLLWTRQDTQLPQESGFPFPKPPLISHLEREVDPCVQDPQDRESL SCSYPVSADKMWPENEKASSQQEIFENGEAYWMKFNSLLKVDSRDPKVREVCVQDVKLEN QWETSIREKLREEKEGSEEVTCKKGKNQKVLSKNLNPNSKHSQCNKVLIAQKLHECARCG KNFSWHSDLILHEQIHSGEKPHVCNECGKAFKTRNQLSMHRIIHTGEKPFNCTQCGKAFN SRSALCRHKKTHSGEKPHECRDCGKAFKTRNRLCMHQLIHTGEKPYKCNCCGKAFQFKHS LTIHGRIHTGEKPYECEECGKAFSGSSDLTKHIRIHTGERPYECSKCGRAFSRSSDLSKH KRIHTREKHYGCPQCGKDFSIKAELTKHRRIHTEEKRYRCEECGKAFRHNCKRRAHEREH TGEKPYQCRDCGKTFQDKHCLTIHQRIHTGEKPYKCLECGKAFSGKSNLTNHRRIHTGEK PHKCEVCGMAFHHSSVLRQHKRIHTGEKPYTCSECGTSFRQGSALIGHKRVHTGEKPYEC EECGKAFRVSSNLTGHKKRKHQVWSTHELDGSRKSLSPVTVSQTSVVSILTSA* # Gene 13 (Forward). 3 exons. 202 aa. Score = 0.98 First 440347 440355 -1.06 + 0 0 1.87 4.61 0.11 0.00 AA 1: 3 chr6_cox_hap1_13 Internal 458840 459355 3.90 + 0 0 3.84 1.47 15.67 0.00 AA 4:175 chr6_cox_hap1_13 Terminal 463544 463624 -1.86 + 0 0 2.07 0.00 6.11 0.00 AA 176:202 chr6_cox_hap1_13 >chr6_cox_hap1_13|geneid_v1.2_predicted_cDNA_13|606_NN ATGGGGACGGTCGGTAACCTCTATACATCTGGAAAGGCTAGATGTGGCAAATGTTTCCTT GTAAAAGTTTTGGGGGAAGCTGAGAGCAGCTTTCTCACATTATACACGCAGGTCTCCTAT AAACGCCGGTACATCCTCCCAAAGCGTGATGGGAATCTCCAAATCGCTAAATGTGTCCTG TTACTCCGTTTCTCTTTTCCCACATCAACGTCTGGTAGAAGGAAGGCCAACTGCCCCATG GTCGCTACCATTCCACCCGTCCTCATCCGGGACTTCGCTGACCTTCCGGCCGTTAAGGCT GTTGTCTGTTGTCATCAGGACCAGGTAGGTCTCACCCAATTGGGACAGAGAGGTCCCCCG AGGACAGCATCTGCGCGGCGCCGTGGCCTAAAGAGGAGGCCAGGCCTCTCCCTAACTCCG CCTTCGCGGGCCCTGCACCCCAGCAGCCTCTGCGTGTTTCTTCCCGCCCGGCACACCCGC GGCCATCCAAAGGTGCTGTGTGCCGGCGGCCACCAGGTCACCGAGACACTACAGTTGAAA GAATTGGAGGTCCTAGGTCAGAGACAAAGACAGATTGGAATAGAAGTTGGGACCGAAAGT AAATAA >chr6_cox_hap1_13|geneid_v1.2_predicted_protein_13|202_AA MGTVGNLYTSGKARCGKCFLVKVLGEAESSFLTLYTQVSYKRRYILPKRDGNLQIAKCVL LLRFSFPTSTSGRRKANCPMVATIPPVLIRDFADLPAVKAVVCCHQDQVGLTQLGQRGPP RTASARRRGLKRRPGLSLTPPSRALHPSSLCVFLPARHTRGHPKVLCAGGHQVTETLQLK ELEVLGQRQRQIGIEVGTESK* # Gene 14 (Reverse). 1 exons. 299 aa. Score = 5.50 Single 467314 468210 5.50 - 0 0 0.00 0.22 27.29 0.00 AA 1:299 chr6_cox_hap1_14 >chr6_cox_hap1_14|geneid_v1.2_predicted_cDNA_14|897_NN ATGGAGATGATCCTGTCAGGAGTTGTCGCCATCTTCTACTTAATTACATTGGTGGGTAAC ACAGCCATCATTCTTGCATCTCTCCTGGATTCCCAGCTTCATACACCAATGTACTTTTTC CTCAGAAATTTATCTTTCCTAGATCTATGTTTCACAACCAGCATCATCCCTCAGATGCTG GTCAACTTGTGGGGACCTGATAAGACCATCAGCTATGTGGGTTGTATCATCCAACTCTAT GTTTACATGTGGTTGGGCTCAGTTGAGTGCCTTCTCCTGGCTGTTATGTCCTATGATCGT TTTACAGCTATATGTAAGCCCTTGCATTATTTTGTAGTCATGAACCCACATCTATGTCTA AAGATGATTATCATGATCTGGAGTATTAGTTTGGCCAATTCTGTAGTATTATGTACACTC ACTCTGAATTTGCCCACATGTGGAAACAACATTCTGGATCATTTCTTGTGTGAGTTGCCA GCTCTGGTCAAGATAGCTTGTGTAGACACCACAACAGTTGAAATGTCTGTTTTCGCTTTA GGCATTATAATTGTCCTCACACCTCTCATCCTTATTCTTATATCCTATGGCTACATTGCC AAAGCTGTGCTGAGAACGAAGTCAAAAGCAAGCCAGCGAAAAGCAATGAATACCTGTGGA TCTCATCTTACTGTAGTGTCTATGTTCTATGGAACTATTATCTACATGTACCTGCAACCA GGTAACAGGGCTTCCAAAGACCAGGGCAAGTTCCTCACCCTCTTTTACACCGTCATCACT CCAAGTCTCAACCCGCTCATTTACACCTTAAGAAATAAGGACATGAAGGATGCCCTGAAG AAACTGATGAGATTTCACCACAAATCTACAAAAATAAAGAGGAATTGCAAGTCATAG >chr6_cox_hap1_14|geneid_v1.2_predicted_protein_14|299_AA MEMILSGVVAIFYLITLVGNTAIILASLLDSQLHTPMYFFLRNLSFLDLCFTTSIIPQML VNLWGPDKTISYVGCIIQLYVYMWLGSVECLLLAVMSYDRFTAICKPLHYFVVMNPHLCL KMIIMIWSISLANSVVLCTLTLNLPTCGNNILDHFLCELPALVKIACVDTTTVEMSVFAL GIIIVLTPLILILISYGYIAKAVLRTKSKASQRKAMNTCGSHLTVVSMFYGTIIYMYLQP GNRASKDQGKFLTLFYTVITPSLNPLIYTLRNKDMKDALKKLMRFHHKSTKIKRNCKS* # Gene 15 (Reverse). 1 exons. 314 aa. Score = 4.35 Single 509464 510405 4.35 - 0 0 0.00 1.09 23.12 0.00 AA 1:314 chr6_cox_hap1_15 >chr6_cox_hap1_15|geneid_v1.2_predicted_cDNA_15|942_NN ATGAATTGGGAAAATGAGAGCTCCCCAAAAGAGTTTATACTACTTGGCTTCTCAGATAGG GCTTGGCTACAAATGCCCCTTTTTGTGGTCCTGTTAATATCATACACAATCACCATATTT GGCAATGTGTCCATCATGATGGTGTGCATTCTGGATCCCAAACTTCATACTCCCATGTAT TTCTTTCTCACTAATCTCTCCATCTTAGATCTCTGCTATACCACAACTACAGTCCCTCAT ATGTTGGTAAATATTGGTTGCAACAAAAAGACCATCAGCTATGCTGGCTGTGTGGCCCAC CTCATCATCTTCCTGGCCCTAGGTGCTACAGAGTGTCTCCTTCTGGCTGTTATGTCCTTT GACAGATATGTGGCTGTTTGCAGACCCCTCCACTATGTAGTCATCATGAATTATTGGTTC TGCCTAAGGATGGCAGCCTTCTCATGGCTCATTGGTTTCGGCAACTCAGTGCTGCAGTCT TCCTTGACTCTTAACATGCCACGCTGTGGTCACCAGGAAGTGGACCACTTTTTCTGTGAG GTGCCTGCACTTCTCAAGTTGTCATGTGCTGACACAAAGCCTATTGAGGCTGAGCTCTTC TTCTTTAGTGTACTAATTCTTCTAATTCCAGTGACATTGATCCTCATCTCCTATGGCTTC ATAGCTCAAGCAGTATTAAAAATCAGGTCAGCAGAAGGACGGCAAAAAGCATTTGGGACA TGTGGGTCCCACATGATTGTGGTGTCCCTCTTTTATGGAACAGCCATTTATATGTATCTT CAACCACCTTCATCCACCTCTAAGGACTGGGGAAAGATGGTTTCCCTCTTCTATGGAATC ATCACATCCATGTTGAACTCCCTCATCTACAGCCTTAGAAATAAAGATATGAAGGAGGCC TTCAAGAGGCTGATGCCAAGAATCTTTTTCTGTAAGAAATAA >chr6_cox_hap1_15|geneid_v1.2_predicted_protein_15|314_AA MNWENESSPKEFILLGFSDRAWLQMPLFVVLLISYTITIFGNVSIMMVCILDPKLHTPMY FFLTNLSILDLCYTTTTVPHMLVNIGCNKKTISYAGCVAHLIIFLALGATECLLLAVMSF DRYVAVCRPLHYVVIMNYWFCLRMAAFSWLIGFGNSVLQSSLTLNMPRCGHQEVDHFFCE VPALLKLSCADTKPIEAELFFFSVLILLIPVTLILISYGFIAQAVLKIRSAEGRQKAFGT CGSHMIVVSLFYGTAIYMYLQPPSSTSKDWGKMVSLFYGIITSMLNSLIYSLRNKDMKEA FKRLMPRIFFCKK* # Gene 16 (Forward). 5 exons. 796 aa. Score = 11.66 First 523982 524551 2.59 + 0 0 -1.51 4.77 15.48 0.00 AA 1:190 chr6_cox_hap1_16 Internal 535049 535948 6.39 + 0 0 -0.67 0.19 30.55 0.00 AA 191:490 chr6_cox_hap1_16 Internal 561103 561122 -0.96 + 0 2 5.55 1.14 1.44 0.00 AA 491:497 chr6_cox_hap1_16 Internal 583315 583342 0.11 + 1 0 -1.89 4.53 8.81 0.00 AA 497:506 chr6_cox_hap1_16 Terminal 596861 597730 3.53 + 0 0 1.05 0.00 21.14 0.00 AA 507:796 chr6_cox_hap1_16 >chr6_cox_hap1_16|geneid_v1.2_predicted_cDNA_16|2388_NN ATGGTGCACACTATCTGGAATTGGGATACTTTTTTCTCCAATCTGTTTGCAAGTGAGCAG TTGGCAATGCATGGACAGACTTTGAGTTTATGCGATTCTTTAGGTACAGGAAAAATAAGA ATGTTGATGAAAAAAAATGCAAGTTTTGAAGACTTCTTTATTCTACTTGGATTTTCTAAC TGGCCTCATCTGGAAGTAGTTCTCTTTGTGGTTATCTTGATCTTCTACTTGATAACACTG ATAGGAAACCTGTTCATCATCATCCTGTCATACCTGGACTCCCATCTCCACACTCCCATG TACTTCTTCCTTTCAAATCTCTCATTTCTGGATCTCTGCTACACCACCAGCTCTATCCCT CAGTTGCTGGTGAATCTCTGGGGCCCGGAAAAGACCATCTCTTATGCTGGTTGTACAGTT CAACTTTACTTTGTTCTCGCACTGGGAACCGCAGAGTGTGTCCTACTGGTGGTGATGTCC TATGATCGTTATGCAGCTGTGTGTAGACCTTTGCATTACACTGTCCTCATGCACCCTCGT TTCTGCCGCTTGTTGGCTGCGGCTTCTTGGGAAATGAATGATGATGGAAAAGTCAATGCT AGCTCTGAGGGGTACTTTATTTTAGTTGGATTTTCTAATTGGCCTCATCTGGAAGTAGTT ATCTTTGTGGTTGTCTTGATCTTCTACTTGATGACACTGATAGGAAACCTGTTCATCATC ATCCTGTCATACCTGGACTCCCATCTGCACACACCAATGTACTTCTTCCTTTCAAACCTC TCATTTCTGGATCTCTGCTACACCACCAGCTCTATCCCTCAGTTGCTGGTCAATCTCTGG GGCCCGGAAAAGACCATCTCTTATGCTGGTTGCATGATTCAACTTTACTTTGTTCTCGCA CTGGGAACCACAGAGTGTGTCCTACTGGTGGTGATGTCCTATGACCGTTATGCAGCTGTG TGTAGACCTTTGCATTACACTGTCCTCATGCACCCTCGTTTCTGCCACCTGCTGGCTGTG GCTTCTTGGGTAAGTGGTTTTACCAACTCAGCACTTCATTCCTCCTTCACCTTCTGGGTA CCTCTGTGTGGACACCGCCAAGTAGATCACTTTTTCTGTGAAGTTCCAGCACTTCTGCGA TTATCGTGTGTTGATACCCATGTCAATGAGCTGACCCTCATGATCACAAGCTCCATATTT GTTCTCATACCTCTCATCCTCATTCTCACTTCTTATGGTGCCATCGTCCGAGCTGTACTG AGGATGCAGTCAACCACTGGGCTTCAGAAAGTGTTTGGAACATGTGGAGCTCATCTTATG GCTGTATCTCTCTTTTTCATTCCGGCCATGTGCATATATCTCCAGCCACCATCAGGAAAT TCTCAAGATCAAGGCAAGTTCATTGCCCTCTTTTATACTGTTGTCACACCTAGTCTTAAC CCTCTAATCTACACCCTCAGAAACAAAGTTGGTGTAGATAAAAGGGTTGAGAACAACGGC ATTAACAACGGCCGGAAGCTGGAAGTAGTTCTCTTTGTGGTTATCTTGATCTTCTACCTG ATGACACTGACAGGAAACCTGTTCATCATCATCCTGTCATACGTGGACTCCCATCTCCAC ACACCAATGTACTTCTTCCTTTCAAACCTCTCATTTCTGGATCTCTGCTACACCACCAGC TCTATCCCTCAGTTGCTGGTGAATCTCCGGGGCCCGGAAAAGACCATCTCGTATGCTGGT TGCATGGTTCAACTTTACTTTGTTCTTGCACTGGGAATCGCAGAGTGTGTCCTACTGGTG GTGATGTCGTATGATCGTTATGTAGCTGTGTGTAGACCTTTGCATTACACTGTCCTCATG CACCCTCGTTTCTGCCACTTGTTGGTTGCGGCTTCTTGGGTAATTGGTTTTACTATCTCA GCACTTCATTCCTCCTTTACTTTCTGGGTACCCCTTTGTGGACATCGCCTAGTGGATCAC TTCTTCTGTGAAGTTCCAGCACTTCTGCGTTTATCATGTGTTGACACCCATGCAAATGAG CTGACCCTCATGGTCATGAGCTCCATTTTTGTTCTCATACCTCTCATTCTCATTCTCACT ACCTATGGTGCCATTGCCCGGGCTGTACTGAGCATGCAATCAACCACTGGGCTTCAGAAA GTGTTTAGGACATGTGGAGCCCATCTTATGGTTGTATCTCTCTTTTTCATTCCAGTCATG TGCATGTATCTCCAGCCACCATCAGAAAATTCTCCTGATCAGGGCAAGTTCATTGCCCTC TTTTATACTGTTGTCACACCGAGTCTTAATCCTCTAATCTACACTCTCAGAAACAAGCAT GTAAAAGGGGCAGCGAAGAGACTATTGGGGTGGGAGTGGGGGAAGTGA >chr6_cox_hap1_16|geneid_v1.2_predicted_protein_16|796_AA MVHTIWNWDTFFSNLFASEQLAMHGQTLSLCDSLGTGKIRMLMKKNASFEDFFILLGFSN WPHLEVVLFVVILIFYLITLIGNLFIIILSYLDSHLHTPMYFFLSNLSFLDLCYTTSSIP QLLVNLWGPEKTISYAGCTVQLYFVLALGTAECVLLVVMSYDRYAAVCRPLHYTVLMHPR FCRLLAAASWEMNDDGKVNASSEGYFILVGFSNWPHLEVVIFVVVLIFYLMTLIGNLFII ILSYLDSHLHTPMYFFLSNLSFLDLCYTTSSIPQLLVNLWGPEKTISYAGCMIQLYFVLA LGTTECVLLVVMSYDRYAAVCRPLHYTVLMHPRFCHLLAVASWVSGFTNSALHSSFTFWV PLCGHRQVDHFFCEVPALLRLSCVDTHVNELTLMITSSIFVLIPLILILTSYGAIVRAVL RMQSTTGLQKVFGTCGAHLMAVSLFFIPAMCIYLQPPSGNSQDQGKFIALFYTVVTPSLN PLIYTLRNKVGVDKRVENNGINNGRKLEVVLFVVILIFYLMTLTGNLFIIILSYVDSHLH TPMYFFLSNLSFLDLCYTTSSIPQLLVNLRGPEKTISYAGCMVQLYFVLALGIAECVLLV VMSYDRYVAVCRPLHYTVLMHPRFCHLLVAASWVIGFTISALHSSFTFWVPLCGHRLVDH FFCEVPALLRLSCVDTHANELTLMVMSSIFVLIPLILILTTYGAIARAVLSMQSTTGLQK VFRTCGAHLMVVSLFFIPVMCMYLQPPSENSPDQGKFIALFYTVVTPSLNPLIYTLRNKH VKGAAKRLLGWEWGK* # Gene 17 (Forward). 3 exons. 351 aa. Score = 7.91 First 618640 618771 0.22 + 0 0 0.90 4.11 6.92 0.00 AA 1: 44 chr6_cox_hap1_17 Internal 638567 639301 6.56 + 0 0 1.75 2.85 23.39 0.00 AA 45:289 chr6_cox_hap1_17 Terminal 652466 652651 1.12 + 0 0 2.82 0.00 12.45 0.00 AA 290:351 chr6_cox_hap1_17 >chr6_cox_hap1_17|geneid_v1.2_predicted_cDNA_17|1053_NN ATGGAGGACCTGCTTACTGCTATGAGGTGTTACTTTATAGAGGTCCTGGAGAAGCTGATT GAGGCCACGTCAATGTTGCAAGGAGACATGAGACTCACATCAGAGTTCTATGGCTTAACA TGGGGGATGGTGGATCCAAAACTCCACATCCCTATGTATTTCTTTCTTTCCAACCTTTCC TTGGTAGACCTCTGTTTGACCAGCAGCTGTGTTCCACAGATGTTGATTAACTTCTGGGGC CCAGAAAAGACCATCAGCTACATTGGCTGTGCCATTCAACTCTATGTTTTTTTGTGGCTT GGGGCCACGGAATGTGTCCTTCTTGTTGTCATGGCTGTGGATTGTTATGTAGCAGTGTGT CATCCACTGCAAAATACCATGATCATGCACCCAAAACTTTGTCTGCAGCTGGCTATCTTG GCATGGGGGACTGGCTTGGCCCAGTCTCTGATCCAGTCCCCTGCCACCCTCCGGTTACCC TTCTGCTCCCAGCGGATGGTGGATGATGTTGTTTGTGAAGTCCCAGCTCTGATTCAGCTC TCCAGTACTGATACTACCTACAGTGAAATTCAGATGTCTATCGCCAGTGTTGTCCTCCTG GTGATGCCCTTGATCATTATCCTTTCCTCTTCTGGTGCTATTGCTAAGGCTGTGCTGAGA ATTAAGTCAACTGCAGGACAGAAGAAAGCATTTGGCACCTGCATCTCTCACCTTCTTGTG GTTTCTCTCTTTTATGGCACTGTCACAGGTGTCTACCTTCAACCAAAAAATCACTATCCT CATGAATGGGGCAAATTTCTCACTCTTTTCTACACTGTAGTAACCCCAACTCTTAATCCC CTCATCTACACTCTAAGGAACAAGGAGTGTGTAGATGAGAGGATTGAGGGTCGGGGTCAC AACTGTATAGAAGAGGGAGATGAACTTCCCATGAGCATGGGCATAAGAACTGTTGGACTG GATGTAGACAGCTGTGATGGTCCCACAGAAGAGGGACACTACTATCAAATGGGATCCACA TGTCCCCAGGCCTTTGCACCAGGCCTGGACTGA >chr6_cox_hap1_17|geneid_v1.2_predicted_protein_17|351_AA MEDLLTAMRCYFIEVLEKLIEATSMLQGDMRLTSEFYGLTWGMVDPKLHIPMYFFLSNLS LVDLCLTSSCVPQMLINFWGPEKTISYIGCAIQLYVFLWLGATECVLLVVMAVDCYVAVC HPLQNTMIMHPKLCLQLAILAWGTGLAQSLIQSPATLRLPFCSQRMVDDVVCEVPALIQL SSTDTTYSEIQMSIASVVLLVMPLIIILSSSGAIAKAVLRIKSTAGQKKAFGTCISHLLV VSLFYGTVTGVYLQPKNHYPHEWGKFLTLFYTVVTPTLNPLIYTLRNKECVDERIEGRGH NCIEEGDELPMSMGIRTVGLDVDSCDGPTEEGHYYQMGSTCPQAFAPGLD* # Gene 18 (Forward). 2 exons. 554 aa. Score = 14.12 First 714151 714818 5.24 + 0 2 -0.92 -0.60 29.25 0.00 AA 1:223 chr6_cox_hap1_18 Terminal 729865 730858 8.88 + 1 0 3.11 0.00 31.40 0.00 AA 223:554 chr6_cox_hap1_18 >chr6_cox_hap1_18|geneid_v1.2_predicted_cDNA_18|1662_NN ATGCTGGTCAACCTCCGGGGACCAGAAAAGACCATTAGCTATGGGGGTTGTGTTGCCCAA CTCTATATATTTTTGGCCCTGGGTTCTACTGAATGCATACTTCTAGCCATCATGGCCTTT GACCGTTACGCTGCCATTTGCAAGCCCCTTCACTACCCAGTCATCATGAACCATAGACGC TGTATCCACATGGCTGCTGGCACTTGGATCAGTGGCTTTGCTAACTCCCTTGTCCAGTCC ACTCTCACAGTGGTGGCCCCAAGATGTGGACAGAGGGTGTTGGACCATTTCTTCTGTGAA GTTCCAGCCCTTTTGAAACTAGCCTGTATTGATATTCGTGTGAATGAAATGGAGCTCAAT GTACTAGGCGCTTTGCTTCTCCTGATGCCACTCACCCTCATCCTGGGCACTTATGTGTTC ATTGCTCAGGCAGTAATGAGAATCTGCTCTGCTGAAAGTCGCTGGAAGGCTTTCAATACC TGTGCCTCACATTTGCTGGTGGTCTCCCTCTTCTACTTCACAGCCATCAGTATGTATGTC CAGCCTCCCTCTAGCTATTCTCATGACCGGGGGAAGATCATGGCTCTCTTTTATGGCATT GTCACACCCACCCTCAACCCATTCATCTACACATTGAGAAACAAGGATGTGAAAGCTGCC CTGAGAAGAGTCACACTTGGTATCTTCAGAGAGACTATGGTCAATTTGACTTCAATGAGT GGATTCCTTCTTATGGGGTTTTCTGATGAGCGTAAGCTTCAGATTTTACATGCATTGGTA TTTCTGGTGACATACCTGCTGGCCTTGACAGGCAACCTCCTCATTATCACCATCATTACC GTGGACCGTCGTCTCCATTCCCCCATGTATTACTTTTTAAAGCACCTCTCTCTTCTGGAC CTCTGCTTCATCTCTGTCACAGTCCCCCAGTCCATTGCAAATTCACTTATGGGCAACGGT TACATTTCTCTTGTTCAGTGCATTCTTCAGGTTTTCTTCTTCATAGCTCTGGCCTCATCA GAAGTGGCCATTCTCACAGTGATGTCTTATGACAGGTACGCAGCAATCTGTCAACCACTT CATTATGAGACTATTATGGATCCCCGTGCCTGTAGGCATGCAGTGATAGCTGTGTGGATT GCTGGGGGCCTCTCTGGGCTCATGCATGCTGCCATTAACTTCTCCATACCTCTCTGTGGG AAGAGAGTCATTCACCAATTCTTCTGTGATGTTCCTCAGATGCTGAAACTAGCCTGTTCT TATGAATTCATTAATGAGATTGCACTGGCTGCATTCACAACGTCTGCAGCATTTATCTGT TTGATCTCCATTGTGCTCTCCTACATTCGCATCTTCTCTACAGTGCTGAGAATCCCATCA GCTGAGGGCCGGACCAAGGTCTTCTCCACCTGCCTACCACACCTATTTGTAGCCACCTTC TTTCTTTCAGCTGCAGGCTTTGAGTTTCTCAGACTGCCTTCTGATTCCTCATCGACTGTG GACCTTGTATTCTCCGTATTCTATACTGTGATACCTCCAACACTCAATCCAGTCATTTAT AGCTTACGGAATGATTCCATGAAGGCAGCACTGAGGAAGATGCTGTCAAAGGAAGAGCTT CCTCAGAGAAAAATGTGCTTAAAAGCCATGTTTAAACTCTGA >chr6_cox_hap1_18|geneid_v1.2_predicted_protein_18|554_AA MLVNLRGPEKTISYGGCVAQLYIFLALGSTECILLAIMAFDRYAAICKPLHYPVIMNHRR CIHMAAGTWISGFANSLVQSTLTVVAPRCGQRVLDHFFCEVPALLKLACIDIRVNEMELN VLGALLLLMPLTLILGTYVFIAQAVMRICSAESRWKAFNTCASHLLVVSLFYFTAISMYV QPPSSYSHDRGKIMALFYGIVTPTLNPFIYTLRNKDVKAALRRVTLGIFRETMVNLTSMS GFLLMGFSDERKLQILHALVFLVTYLLALTGNLLIITIITVDRRLHSPMYYFLKHLSLLD LCFISVTVPQSIANSLMGNGYISLVQCILQVFFFIALASSEVAILTVMSYDRYAAICQPL HYETIMDPRACRHAVIAVWIAGGLSGLMHAAINFSIPLCGKRVIHQFFCDVPQMLKLACS YEFINEIALAAFTTSAAFICLISIVLSYIRIFSTVLRIPSAEGRTKVFSTCLPHLFVATF FLSAAGFEFLRLPSDSSSTVDLVFSVFYTVIPPTLNPVIYSLRNDSMKAALRKMLSKEEL PQRKMCLKAMFKL* # Gene 19 (Reverse). 4 exons. 582 aa. Score = 21.92 Terminal 753382 753868 5.90 - 1 0 0.00 2.90 24.28 0.00 AA 420:582 chr6_cox_hap1_19 Internal 779007 779073 0.77 - 2 2 0.90 6.38 4.89 0.00 AA 398:420 chr6_cox_hap1_19 Internal 797593 798285 6.32 - 2 1 1.98 2.72 22.63 0.00 AA 167:398 chr6_cox_hap1_19 First 819797 820295 8.92 - 0 1 1.92 -0.01 33.31 0.00 AA 1:167 chr6_cox_hap1_19 >chr6_cox_hap1_19|geneid_v1.2_predicted_cDNA_19|1746_NN ATGATGGATACGGTTGGAACCACAGAAGTTCAAGCGAGAAGTCATTACGGAGTGCAGCAG GGCATGGAAAAAACCAATGACCCAGATTGTGATGGCCATCTGGGTACAGAGCTGAGGGTT CATGATGACAGTGTAGCGAAGTGGCTTGCAGATAGCCACAGAGAGGTCAAATGCCATCAC GGCGAACAACATGGACTCCGTGCTGCCCAGGAAGTGGAAGAAATGAAGCTGGCTTATGCA TCCCAAGAAAGAAATTGCTTTGTGTGTAGAGAGAAAGTTCTGCAGCATTTTTGGCAGTGT CACCGTAGAGTAACAGATATCCAGGTAGGACAGGTTTCCCAGGAAGAAATACATAAGGGA ATGGAGTCTAGGATCGGAGATGACAATCATCAGAACGGCTCCATTCCCAGTCACACTGAT GAAGTAGATGGTGAGGAAAACCACGAAGAGAAAAGGCTGCAGTTCTTGAATGTCTGTCAC TCCCAAGAGGAGAAATTCGTGACACTGCCCAAGCTGCTCGTAAACCTCGTGTGCAGTCGC AGGGCTATATCTTTTCTAGGCTGTATCATCCAGCTACACTTCTTCCACTTTTTGGGAAGC ACAGAGGCCATTTTACTGGCTATCATGGCCTTTGACCGTTTTGTTGCCATCTGCAATCCT CTTCGCTACACTGTCATCATGAACCCCCAGGTGTGTATTCTGTTGGCAGCTGCGGCCTGG CTCATCAGCTTCTTTTACGCTCTGATGCATTCTGTCATGACTGCACACCTGAGTTTTTGT GGCTCTCAGAAACTCAATCACTTCTTCTACGATGTCAAGCCGCTCTTAGAATTGGCCTGT AGTGACACATTACTCAATCAATGGCTTCTTTCCATTGTCACAGGCAGCATATCCATGGGA GCTTTCTTTCTGACTCTTCTCTCCTGCTTCTATGTAATTGGCTTCCTTCTGTTTAAGAAC AGGTCCTGCAGAATACTCCACAAGGCTCTGTCCACTTGTGCCTCCCATTTTATGGTGGTA TGTCTTTTCTATGGACCTGTGGGCTTCACATATATTCGTCCTGCTTCAGCCACCTCCATG ATTCAGGACCGGATAATGGCCATCATGTATAGCGCCGTCACCCCTGTACTGAATCCACTA ATCTACACCCTTAGGAACAAAGAAGTGATGATGGCTCTGAAGAAAATCTTTGGATCAGAG TGTCTCCTACTGGCAGCAATGGCATATGATCGTTACATTGCAATCTGCAATCCTTTAAGG GATATCTTAGCTAGAGCAAAAAATGGAACAGGCAAGAGCAGTGCCCATGACATTCCCCTA CTTAAAAGGCTAGACCTGAAGAAGGACACTATACAAACAATAGTGATTGTTCCCACAGGA GGACCTGCTCTACAGGTCAGTCAAATTTGCATCCAGGTCAGCAAACACATGGGAGGAGTC AAAGTGGTGATGACCACAGGAGGAACCAATTCAGGAGATGACGTACTGAGGCTGGATGAT ACAGTGCACATGGTGATTGCTGCCCCTGGGAGAATCCTGAATCTTATTAAGAAAGGAGTA GCAAAGGTCAGTCATGTCCAGGTGATAGTATTGGATGAGGCAGATAAGTTTCTGTCCCAG GATTTTGGGCAGTTAATGGAAGATATTATTCTCATGCTACCTGAAGACAGGCAGATTTTA CTACATTCTGCTACTTTCCCTCTTAGTATACAGAAGTTCATGAATTCCCATTTGCAGAAA CCCTGA >chr6_cox_hap1_19|geneid_v1.2_predicted_protein_19|582_AA MMDTVGTTEVQARSHYGVQQGMEKTNDPDCDGHLGTELRVHDDSVAKWLADSHREVKCHH GEQHGLRAAQEVEEMKLAYASQERNCFVCREKVLQHFWQCHRRVTDIQVGQVSQEEIHKG MESRIGDDNHQNGSIPSHTDEVDGEENHEEKRLQFLNVCHSQEEKFVTLPKLLVNLVCSR RAISFLGCIIQLHFFHFLGSTEAILLAIMAFDRFVAICNPLRYTVIMNPQVCILLAAAAW LISFFYALMHSVMTAHLSFCGSQKLNHFFYDVKPLLELACSDTLLNQWLLSIVTGSISMG AFFLTLLSCFYVIGFLLFKNRSCRILHKALSTCASHFMVVCLFYGPVGFTYIRPASATSM IQDRIMAIMYSAVTPVLNPLIYTLRNKEVMMALKKIFGSECLLLAAMAYDRYIAICNPLR DILARAKNGTGKSSAHDIPLLKRLDLKKDTIQTIVIVPTGGPALQVSQICIQVSKHMGGV KVVMTTGGTNSGDDVLRLDDTVHMVIAAPGRILNLIKKGVAKVSHVQVIVLDEADKFLSQ DFGQLMEDIILMLPEDRQILLHSATFPLSIQKFMNSHLQKP* # Gene 20 (Reverse). 1 exons. 148 aa. Score = 4.32 Single 840359 840802 4.32 - 0 0 0.00 -1.06 26.27 0.00 AA 1:148 chr6_cox_hap1_20 >chr6_cox_hap1_20|geneid_v1.2_predicted_cDNA_20|444_NN ATGGAAAAAACCAATCATCCAGATTGTGATGGCCATCTGGGTACAGAGCTGAGGGTTCAT AATGACAGTGTAGCGAAGTGGCTTGCAAATAGCCACAAAGCGGTCAAATGCCATCACGGC CAACAACATGGCCTCTGTGCTGCCCAGGAAGTGGAAGAAATGGAGTTGGCTTATGCATCC CAAGAAAGAAATTGCTTTGTGTGCAGAGAGGAAGTTCTGCAGCATTTTTGGCAGTGTTAC GCTGGAGTAGCAGATGTCCAGGCAGGACAGGTTTCCCAGGAAGAAATACATAGGGGAATG GAGTCTAGGATCAGAGATGACAATCATCAGAATGGCTCCATTCCCAGCCACACTGATGAA GTAGATGGTAAGGAAAACAACGAAGAGAAAAGGCTGCAGTTCTTGAATGTCTGTCACTCC CAAAAGGAGAAATTCAGTGACTGA >chr6_cox_hap1_20|geneid_v1.2_predicted_protein_20|148_AA MEKTNHPDCDGHLGTELRVHNDSVAKWLANSHKAVKCHHGQQHGLCAAQEVEEMELAYAS QERNCFVCREEVLQHFWQCYAGVADVQAGQVSQEEIHRGMESRIRDDNHQNGSIPSHTDE VDGKENNEEKRLQFLNVCHSQKEKFSD* # Gene 21 (Reverse). 1 exons. 316 aa. Score = 7.77 Single 849756 850703 7.77 - 0 0 0.00 1.48 31.07 0.00 AA 1:316 chr6_cox_hap1_21 >chr6_cox_hap1_21|geneid_v1.2_predicted_cDNA_21|948_NN ATGGAAATTGTCTCCACAGGAAACGAAACTATTACTGAATTTGTCCTCCTTGGCTTCTAT GACATCCCTGAACTGCATTTCTTGTTTTTTATTGTATTCACTGCTGTCTATGTCTTCATC ATCATAGGGAATATGCTGATTATTGTAGCAGTGGTTAGCTCCCAGAGGCTCCACAAACCC ATGTATATTTTCTTGGCGAATCTGTCCTTCCTGGATATTCTCTACACCTCCGCAGTGATG CCAAAAATGCTGGAGGGCTTCCTGCAAGAAGCAACTATCTCTGTGGCTGGTTGCTTGCTC CAGTTCTTTATCTTCGGCTCTCTAGCCACAGCTGAATGCTTACTGCTGGCTGTCATGGCA TATGACCGCTACCTGGCAATTTGCTACCCACTCCACTACCCACTCCTGATGGGGCCCAGA CGGTACATGGGGCTGGTGGTCACAACCTGGCTCTCTGGATTTGTGGTAGATGGACTGGTT GTGGCCCTGGTGGCCCAGCTGAGGTTCTGTGGCCCCAACCACATTGACCAGTTTTACTGT GACTTTATGCTTTTCGTGGGCCTGGCTTGCTCGGATCCCAGAGTGGCTCAGGTGACAACT CTCATTCTGTCTGTGTTCTGCCTCACTATTCCTTTTGGACTGATTCTGACATCTTATGCC AGAATTGTGGTGGCAGTGCTGAGAGTTCCTGCTGGGGCAAGCAGGAGAAGGGCTTTCTCC ACATGCTCCTCCCACCTAGCTGTAGTGACCACATTCTATGGAACGCTCATGATCTTTTAT GTTGCACCCTCTGCTGTCCATTCCCAGCTCCTCTCCAAGGTCTTCTCCCTGCTCTACACT GTGGTCACCCCTCTCTTCAATCCTGTGATCTATACCATGAGGAACAAGGAGGTGCATCAG GCACTTCGGAAGATTCTCTGTATCAAACAAACTGAAACACTTGATTGA >chr6_cox_hap1_21|geneid_v1.2_predicted_protein_21|316_AA MEIVSTGNETITEFVLLGFYDIPELHFLFFIVFTAVYVFIIIGNMLIIVAVVSSQRLHKP MYIFLANLSFLDILYTSAVMPKMLEGFLQEATISVAGCLLQFFIFGSLATAECLLLAVMA YDRYLAICYPLHYPLLMGPRRYMGLVVTTWLSGFVVDGLVVALVAQLRFCGPNHIDQFYC DFMLFVGLACSDPRVAQVTTLILSVFCLTIPFGLILTSYARIVVAVLRVPAGASRRRAFS TCSSHLAVVTTFYGTLMIFYVAPSAVHSQLLSKVFSLLYTVVTPLFNPVIYTMRNKEVHQ ALRKILCIKQTETLD* # Gene 22 (Forward). 1 exons. 313 aa. Score = 17.65 Single 863078 864016 17.65 + 0 0 1.56 0.00 54.29 0.00 AA 1:313 chr6_cox_hap1_22 >chr6_cox_hap1_22|geneid_v1.2_predicted_cDNA_22|939_NN ATGAGTGCAAACACCTCCATGGTGACTGAGTTTCTTCTTCTCGGCTTCTCCCACCTGGCC GACCTCCAGGGCTTGCTCTTCTCTGTCTTTCTCACTATCTACCTGCTGACCGTGGCAGGC AATTTCCTCATTGTGGTGCTGGTCTCCACTGATGCTGCCCTCCAGTCCCCTATGTACTTC TTCCTGCGCACCCTCTCGGCCTTGGAGATTGGCTATACGTCTGTCACGGTCCCCCTGCTA CTTCACCACCTCCTTACTGGCCGGCGCCACATCTCTCGCTCTGGATGTGCTCTCCAGATG TTCTTCTTCCTCTTCTTTGGCGCCACGGAGTGCTGCCTCCTGGCAGCCATGGCCTATGAC CGCTATGCAGCCATCTGTGAACCCCTCCGCTACCCACTGCTGCTGAGCCACCGGGTGTGT CTACAGCTAGCTGGGTCGGCGTGGGCCTGTGGGGTGCTGGTGGGGCTGGGCCACACCCCT TTCATCTTCTCTTTGCCCTTCTGCGGCCCCAATACCATCCCGCAGTTCTTCTGTGAGATC CAGCCTGTCCTGCAGCTGGTATGTGGAGACACCTCGCTTAATGAACTGCAGATTATCCTG GCAACAGCCCTCCTCATCCTCTGCCCCTTTGGCCTCATCCTGGGCTCCTACGGGCGTATC CTCGTTACCATCTTCCGGATCCCATCTGTTGCGGGCCGCCGCAAGGCCTTCTCCACCTGC TCCTCCCACCTGATCGTGGTCTCCCTCTTCTATGGCACCGCACTCTTTATCTATATTCGC CCTAAGGCCAGCTACGATCCGGCCACTGACCCTCTGGTGTCCCTCTTCTATGCTGTGGTC ACCCCCATCCTCAACCCCATCATCTACAGCCTGCGGAACACAGAGGTCAAAGCTGCCCTA AAGAGAACCATCCAGAAAACGGTGCCTATGGAGATTTGA >chr6_cox_hap1_22|geneid_v1.2_predicted_protein_22|313_AA MSANTSMVTEFLLLGFSHLADLQGLLFSVFLTIYLLTVAGNFLIVVLVSTDAALQSPMYF FLRTLSALEIGYTSVTVPLLLHHLLTGRRHISRSGCALQMFFFLFFGATECCLLAAMAYD RYAAICEPLRYPLLLSHRVCLQLAGSAWACGVLVGLGHTPFIFSLPFCGPNTIPQFFCEI QPVLQLVCGDTSLNELQIILATALLILCPFGLILGSYGRILVTIFRIPSVAGRRKAFSTC SSHLIVVSLFYGTALFIYIRPKASYDPATDPLVSLFYAVVTPILNPIIYSLRNTEVKAAL KRTIQKTVPMEI* # Gene 23 (Reverse). 3 exons. 361 aa. Score = 8.15 Terminal 884745 885284 3.65 - 0 0 0.00 -1.63 25.45 0.00 AA 182:361 chr6_cox_hap1_23 Internal 898584 898850 2.82 - 0 0 1.99 4.39 9.97 0.00 AA 93:181 chr6_cox_hap1_23 First 912390 912665 1.68 - 0 0 -1.07 0.82 18.47 0.00 AA 1: 92 chr6_cox_hap1_23 >chr6_cox_hap1_23|geneid_v1.2_predicted_cDNA_23|1083_NN ATGACTTCCACACAAACAAGTGTGTGTGAGGAGATCCCCATTATCCTCAGCAAGAAGCTC CACAACAGGAGAGCAGGCTGCGTCACGCATCTGACGAACCAGATTCAGAGAGGTCCAGTG AGAGGTATCTCCATCAAGCTACAGGAGGAGGAGAAAGAAAGGAGGGACAATTATGTCCCC AAGGTCTCAGCCCTGGATCAGGAGATCATCGAAGTAGATCCTGACACTAAGGAAATGCTG AAGCTTTTGGACTTTGGCAGCCTGTCCAACCTGCAGGTCTGGAGCAGCCCCTATGTGACC TACATCCTTAACCTGGCCACTGTTGATATGGTCAACCTCTCCTGTGTAACTGTGATCCTG CTGGAGAAAATCCTCATGCTGTATCACCAGGCGGCATTGCAGGTGGCTGTGTTTCTGGAT CCTGTCTCCTATTTCTCCGACACAGTGGGTCTCTGTCTCCTGGTGGCCATGAGTATTGAG AGCTTTCTCTGTGCCCTCTGTCCCACCTGGTGCTGCCACCGCCCAGAGCACACCTCTGCC ATGACTCATAACCCAGGCCACAGATGCCAGCTGCCAGCACAGGCGGGGGTGGATGATGGT GGCATAGTGGAGGGGCTGGCAGACAGCCACGTATCGGTCAAAGGCCATCACTGTCAGGAG GATGCACTCAGTGGTCCCCAGGGACAGGAAGATGAAGAGCTGGACAGAGCATCCCAGGAA GCTGATGGTCTTCTTTGGGCCCCAGAGGTTGACCAGCATCTGGGGGACACAACTTGTGGT AAAGCAGAGGTCCAAGAAGGAGAGGTCAGAGAGGAAAAAGTACATTGGAGAGTGGAGCCT GGGGTACAGTACAGACAGCAGGATGATGAGTGTGTTGCCCACCAGGGTCAAGAGGTAGGA AGTGAAGACAACCACAAAGAGAGTCCTTTCCAGTGCTGGGTGTTCAGAGAAGCCCAGAAG GAGGAAGCCCATGGGGGAGCTTTGGTTAACCATGGCCTGTTCTTGTTTGTACCTGGAGGG ATGAGGCTGTCACCCCAGTGTGATTCAACCTGTCTTATCAAAACTCAGCCTGGGTGTTTG TGA >chr6_cox_hap1_23|geneid_v1.2_predicted_protein_23|361_AA MTSTQTSVCEEIPIILSKKLHNRRAGCVTHLTNQIQRGPVRGISIKLQEEEKERRDNYVP KVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVWSSPYVTYILNLATVDMVNLSCVTVIL LEKILMLYHQAALQVAVFLDPVSYFSDTVGLCLLVAMSIESFLCALCPTWCCHRPEHTSA MTHNPGHRCQLPAQAGVDDGGIVEGLADSHVSVKGHHCQEDALSGPQGQEDEELDRASQE ADGLLWAPEVDQHLGDTTCGKAEVQEGEVREEKVHWRVEPGVQYRQQDDECVAHQGQEVG SEDNHKESPFQCWVFREAQKEEAHGGALVNHGLFLFVPGGMRLSPQCDSTCLIKTQPGCL * # Gene 24 (Reverse). 1 exons. 23 aa. Score = 0.19 Single 942385 942453 0.19 - 0 0 0.00 3.38 7.91 0.00 AA 1: 23 chr6_cox_hap1_24 >chr6_cox_hap1_24|geneid_v1.2_predicted_cDNA_24|69_NN ATGAACGGCATCTACCTGCTCAGGGTGAAGGGCCATGATGACTATAATGGACACCTGGAG GCAGACTAG >chr6_cox_hap1_24|geneid_v1.2_predicted_protein_24|23_AA MNGIYLLRVKGHDDYNGHLEAD* # Gene 25 (Reverse). 2 exons. 217 aa. Score = 3.26 Terminal 960927 961214 -0.88 - 0 0 0.00 -0.72 11.39 0.00 AA 122:217 chr6_cox_hap1_25 First 961410 961772 4.13 - 0 0 1.52 3.09 15.92 0.00 AA 1:121 chr6_cox_hap1_25 >chr6_cox_hap1_25|geneid_v1.2_predicted_cDNA_25|651_NN ATGGCCCAGTTTCTCTCAGTGTTCTCTGGGAAGCTGGATTGGGACAACAGGACAGAGACC CCAGGACAAGTGAACATGAGTCATACGGGAGGCGAGTGGTTGGTGGGCAAACAGGTGGTT TTCATCCTGACAGTGCTGGTGGCCTTCTGTGGGCTGGTGGGCAATGGTGTGGTCTGCTGG CTTTTCTGCTTCCAGGTCAGGAGCAGCCCCTACGTGACCTATGTCCTTAACCTGGCCGCT GCTGATATGGTCAACCTCTCCTGTGTAACTGTGATCCTGTTGGAGAAAATCCTCATGCTG TATCACCAGGTGACATTGCAGGTGGCCATGTTTCTGGAGCCTGTGTCCTATTTCTCTGAC ACAGCAGGCTTTATAATATTTCACATGCTTATTTGTCTTGTGGTGGGCATTTCCAGCCTG ACTTTGATCATCAGGAGCCTGTACTGCCTGAAGAACTGTTCACCCATCCGGATCTACCAC ATTGTCCGCTTTGTGGCCATCAGCTTCCTGGTTTGGGGCCTGCCCTTAGTTGTCCTTGTG TACCTGCCAGGAAAAGAATACCTGACCTTTGCCTTTGACCTTCTGTTGCTGCTGTCCATG GTAGTCAGTATGGCTCAACCAGCCATCTACTTCTTGGCTGGCTACCTTTGA >chr6_cox_hap1_25|geneid_v1.2_predicted_protein_25|217_AA MAQFLSVFSGKLDWDNRTETPGQVNMSHTGGEWLVGKQVVFILTVLVAFCGLVGNGVVCW LFCFQVRSSPYVTYVLNLAAADMVNLSCVTVILLEKILMLYHQVTLQVAMFLEPVSYFSD TAGFIIFHMLICLVVGISSLTLIIRSLYCLKNCSPIRIYHIVRFVAISFLVWGLPLVVLV YLPGKEYLTFAFDLLLLLSMVVSMAQPAIYFLAGYL* # Gene 26 (Forward). 2 exons. 316 aa. Score = 35.50 First 973946 973951 -2.34 + 0 0 -0.23 5.14 0.68 0.00 AA 1: 2 chr6_cox_hap1_26 Terminal 976319 977260 37.83 + 0 0 2.31 0.00 103.61 0.00 AA 3:316 chr6_cox_hap1_26 >chr6_cox_hap1_26|geneid_v1.2_predicted_cDNA_26|948_NN ATGAAGGCCAACTACAGCGCAGAGGAGCGCTTTCTCCTGCTGGGTTTCTCCGACTGGCCT TCCCTGCAGCCGGTCCTCTTCGCCCTTGTCCTCCTGTGCTACCTCCTGACCTTGACGGGC AACTCGGCGCTGGTGCTGCTGGCGGTGCGCGACCCGCGCCTGCACACGCCCATGTACTAC TTCCTCTGCCACCTGGCCTTGGTAGACGCGGGCTTCACTACTAGCGTGGTGCCGCCGCTG CTGGCCAACCTGCGCGGACCAGCGCTCTGGCTGCCGCGCAGCCACTGCACGGCCCAGCTG TGCGCATCGCTGGCTCTGGGTTCCGCCGAATGCGTCCTCCTGGCGGTGATGGCTCTGGAC CGCGCGGCCGCAGTGTGCCGCCCGCTGCGCTATGCGGGGCTCGTCTCCCCGCGCCTATGT CGCACGCTGGCCAGCGCCTCCTGGCTAAGTGGCCTCACCAACTCGGTTGCGCAAACCGCG CTCCTGGCTGAGCGGCCGCTGTGCGCGCCCCGCCTGCTGGACCACTTCATCTGTGAGCTG CCGGCGTTGCTCAAGCTGGCCTGCGGAGGCGACGGAGACACTACCGAGAACCAGATGTTC GCCGCCCGCGTGGTCATCCTGCTGCTGCCGTTTGCCGTCATCCTGGCCTCCTACGGTGCC GTGGCCCGAGCTGTCTGTTGCATGCGGTTCAGCGGAGGCCGGAGGAGGGCGGTGGGCACG TGTGGGTCCCACCTGACAGCCGTCTGCCTGTTCTACGGCTCGGCCATCTACACCTACCTG CAGCCCGCGCAGCGCTACAACCAGGCACGGGGCAAGTTCGTATCGCTCTTCTACACCGTG GTCACACCTGCTCTCAACCCGCTCATCTACACCCTCAGGAATAAGAAAGTGAAGGGGGCA GCGAGGAGGCTGCTGCGGAGTCTGGGGAGAGGCCAGGCTGGGCAGTGA >chr6_cox_hap1_26|geneid_v1.2_predicted_protein_26|316_AA MKANYSAEERFLLLGFSDWPSLQPVLFALVLLCYLLTLTGNSALVLLAVRDPRLHTPMYY FLCHLALVDAGFTTSVVPPLLANLRGPALWLPRSHCTAQLCASLALGSAECVLLAVMALD RAAAVCRPLRYAGLVSPRLCRTLASASWLSGLTNSVAQTALLAERPLCAPRLLDHFICEL PALLKLACGGDGDTTENQMFAARVVILLLPFAVILASYGAVARAVCCMRFSGGRRRAVGT CGSHLTAVCLFYGSAIYTYLQPAQRYNQARGKFVSLFYTVVTPALNPLIYTLRNKKVKGA ARRLLRSLGRGQAGQ* # Gene 27 (Reverse). 2 exons. 185 aa. Score = 8.97 Terminal 978974 979444 10.74 - 0 0 0.00 4.03 34.68 0.00 AA 29:185 chr6_cox_hap1_27 First 983124 983207 -1.77 - 0 0 0.70 1.84 5.64 0.00 AA 1: 28 chr6_cox_hap1_27 >chr6_cox_hap1_27|geneid_v1.2_predicted_cDNA_27|555_NN ATGCCGGGAATTCAAGGAACGAGAATTCCCATAGACACAGACACAGCTAGACATAGAGAT CTGCAGCTTAGGTTTGGGCTGTGGGTGCATGTCCGTTCCGAGGAATGGGATTTAATGACC TTTGATGCCAACCCATATGACAGCGTGAAAAAAATCAAAGAACATGTCCGGTCTAAGACC AAGGTTCCTGTGCAGGACCAGGTTCTTTTGCTGGGCTCCAAGATCTTAAAGCCACGGAGA AGCCTCTCATCTTACGGCATTGACAAAGAGAAGACCATCCACCTTACCCTGAAAGTGGTG AAGCCCAGTGATGAGGAGCTGCCCTTGTTTCTTGTGGAGTCAGGTGATGAGGCAAAGAGG CACCTCCTCCAGGTGCGAAGGTCCAGCTCAGTGGCACAAGTGAAAGCAATGATCGAGACT AAGACGGGTATAATCCCTGAGACCCAGATTGTGACTTGCAATGGAAAGAGACTGGAAGAT GGGAAGATGATGGCAGATTACGGCATCAGAAAGGGCAACTTACTCTTCCTGGCATCTTAT TGTATTGGAGGGTGA >chr6_cox_hap1_27|geneid_v1.2_predicted_protein_27|185_AA MPGIQGTRIPIDTDTARHRDLQLRFGLWVHVRSEEWDLMTFDANPYDSVKKIKEHVRSKT KVPVQDQVLLLGSKILKPRRSLSSYGIDKEKTIHLTLKVVKPSDEELPLFLVESGDEAKR HLLQVRRSSSVAQVKAMIETKTGIIPETQIVTCNGKRLEDGKMMADYGIRKGNLLFLASY CIGG* # Gene 28 (Forward). 3 exons. 299 aa. Score = 14.48 First 997229 997507 3.09 + 0 0 2.31 -0.30 17.20 0.00 AA 1: 93 chr6_cox_hap1_28 Internal 1000662 1000839 3.02 + 0 1 1.56 -1.11 20.75 0.00 AA 94:153 chr6_cox_hap1_28 Terminal 1005605 1006044 8.38 + 2 0 5.79 0.00 24.76 0.00 AA 153:299 chr6_cox_hap1_28 >chr6_cox_hap1_28|geneid_v1.2_predicted_cDNA_28|897_NN ATGCTGGTCAACCTCTGGGAGCCAAAGAAGACCATCATCTTACTGGGCTGCTCTGTCCAG TTCTTCATCTTCCTGTCCCTGGGGACCACTGAGTGCATCCTCCTGACGGTGATGGCCTTT GACCGCTACATGGCTATCTTCAAGCCCCTGCGCCATGCCACCATCGTCCACCTCTGCCTG TGCTGGCAGCTGGCATCTGTGGCCTGGGTCATTGGGCTGGTAGAGTCAGTGGTCCAGACA CCATCCACCCTGCGCCTGCCTTTCTGCCCCCATCAGCAGACTGTGGCAGATTACGCCAAC TGGGATCCGGCGGTCGCAAGGTCTAGAGGAGTCAAGAAAGCCATCACCAACGTCGTTCAG CAGGAAGTAAAATCCCTTTGTGTCTTGGAAGCCTCCCAGGTTCCTGCAGAAGAAGCTGTT TCTGGAGCTAGTGAGCCCTATGACATCATCGACAGCAGCCAGAAGGTGGTGGTCGTACAA TGCGAGAGCATCAACATTTCTGGCAAGTTCTACAGAAACAAGTTGAAGTACCTGGGCTTT CTCCGCAAGCGGATGAACACCTTCTGGAGGCCCTGCCATTTCTCGGCCCTAGCCGCATCT TCTGGTGGATGGTGCAAGGCCCACTGCCCCACAAGACTCACCAAGGCCAGGCCGCCCTCA ACCACCTCAAGGTGTCTGACGGCATTCCACCGCCCCATGACAAGAAAAAGCTTTGGTGGT TCCTGCTGCCCTCAAGCTTGTGTGTCTGAAGCCTACAAGAAAATTTGTCCGCCTGGACAC CGAGCTTATGAAGTTAGCTGGAAGTACCAGGCAGTGACAGCCACCCTGAAGAAGAGGAAG GAGAAGGCCAAGATCCACTACCAGAAGAAGAAACAGCTTATGAGGCTACAGAAATAG >chr6_cox_hap1_28|geneid_v1.2_predicted_protein_28|299_AA MLVNLWEPKKTIILLGCSVQFFIFLSLGTTECILLTVMAFDRYMAIFKPLRHATIVHLCL CWQLASVAWVIGLVESVVQTPSTLRLPFCPHQQTVADYANWDPAVARSRGVKKAITNVVQ QEVKSLCVLEASQVPAEEAVSGASEPYDIIDSSQKVVVVQCESINISGKFYRNKLKYLGF LRKRMNTFWRPCHFSALAASSGGWCKAHCPTRLTKARPPSTTSRCLTAFHRPMTRKSFGG SCCPQACVSEAYKKICPPGHRAYEVSWKYQAVTATLKKRKEKAKIHYQKKKQLMRLQK* # Gene 29 (Forward). 2 exons. 322 aa. Score = 9.17 First 1011038 1011919 10.95 + 0 0 1.37 2.57 33.96 0.00 AA 1:294 chr6_cox_hap1_29 Terminal 1025308 1025391 -1.78 + 0 0 2.44 0.00 4.39 0.00 AA 295:322 chr6_cox_hap1_29 >chr6_cox_hap1_29|geneid_v1.2_predicted_cDNA_29|966_NN ATGGTTAACCAAAGCTCCACACCGGGCTTCCTCCTTCTGGGCTTCTCTGAACACCCAGGG CTGGAAAGGACTCTCTTCGTGGTTGTCTTCACTTCCTACCTCCTAACCCTAGTGGGCAAC ACACTCATCATCCTGCTGTCTGCGCTGGACCCCAAGCTCCACTCTCCAATGTACTTTTTC CTCTCCAACCTCTCCTTCTTGGACCTCTGTTTCACCACGAGTTGTGTTCCCCAAATGCTG GTCAACCTCTGGGGCCCAAAGAAGACCATCAGCTTCCTGGACTGCTCTGTCCAGATCTTC ATCTTCCTGTCCCTGGGGACAACTGAGTGCATCCTCTTGACAGTGATGGCTTTTGATCGC TACGTGGCTGTCTGCCAGCCCCTCCACTATGCCACCATCATCCACCCCCGCCTGTGCTGG CAGCTGGCATCTGTGGCCTGGGTCATTGGGCTAGTGGAGTCAGTGGTCCAGACACCATCC ACCCTGCACCTGCCCTTCTGCCCCGATCGGCAGGTGGATGATTTTGTCTGTGAGGTCCCA GCTCTAATTCGACTCTCCTGTGAAGACACCTCCTACAATGAGATCCAGGTGGCTGTTGCC AGTGTCTTCATCTTGGTTGTGCCTCTCAGCCTCATCCTTGTCTCTTACGGAGCCATTACC TGGGCAGTGCTGAGGATTAACTCTGCAAAAGGGCGGAGGAAAGCTTTTGGGACCTGCTCC TCCCATCTCACTGTGGTCACCCTCTTCTACAGCTCAGTCATTGCTGTCTACCTCCAGCCC AAAAATCCCTATGCCCAAGAGAGGGGCAAGTTCTTTGGTCTCTTCTATGCAGTGGGCACT CCTTCACTTAACCCTCTCATATACACCCTGAGGAACAAGGAGGAAGACTGCAAGGTGCCG AGTCACACTGTTCACTGGTTTATTGAGATTCGGGGAGATCCTTCCCCAAGAGACACCACA GTGTGA >chr6_cox_hap1_29|geneid_v1.2_predicted_protein_29|322_AA MVNQSSTPGFLLLGFSEHPGLERTLFVVVFTSYLLTLVGNTLIILLSALDPKLHSPMYFF LSNLSFLDLCFTTSCVPQMLVNLWGPKKTISFLDCSVQIFIFLSLGTTECILLTVMAFDR YVAVCQPLHYATIIHPRLCWQLASVAWVIGLVESVVQTPSTLHLPFCPDRQVDDFVCEVP ALIRLSCEDTSYNEIQVAVASVFILVVPLSLILVSYGAITWAVLRINSAKGRRKAFGTCS SHLTVVTLFYSSVIAVYLQPKNPYAQERGKFFGLFYAVGTPSLNPLIYTLRNKEEDCKVP SHTVHWFIEIRGDPSPRDTTV* # Gene 30 (Reverse). 20 exons. 908 aa. Score = 55.51 Terminal 1027563 1027730 2.89 - 0 0 0.00 1.92 16.85 0.00 AA 853:908 chr6_cox_hap1_30 Internal 1027953 1028081 2.95 - 0 0 4.41 6.21 3.94 0.00 AA 810:852 chr6_cox_hap1_30 Internal 1028662 1028789 2.31 - 2 0 0.93 2.48 13.16 0.00 AA 767:809 chr6_cox_hap1_30 Internal 1029484 1029577 -0.26 - 0 1 0.53 4.07 4.94 0.00 AA 736:767 chr6_cox_hap1_30 Internal 1029990 1030097 1.23 - 0 0 1.91 1.13 11.00 0.00 AA 700:735 chr6_cox_hap1_30 Internal 1030195 1030311 3.54 - 0 0 3.64 6.28 6.48 0.00 AA 661:699 chr6_cox_hap1_30 Internal 1031694 1031826 0.60 - 1 0 3.65 2.43 4.89 0.00 AA 616:660 chr6_cox_hap1_30 Internal 1032322 1032472 -0.20 - 2 2 4.26 0.38 5.03 0.00 AA 566:616 chr6_cox_hap1_30 Internal 1034017 1034094 3.38 - 2 1 3.89 4.65 9.50 0.00 AA 540:566 chr6_cox_hap1_30 Internal 1035644 1035707 0.98 - 0 1 0.79 4.84 6.51 0.00 AA 519:540 chr6_cox_hap1_30 Internal 1036336 1036578 7.53 - 0 0 1.60 2.81 26.08 0.00 AA 438:518 chr6_cox_hap1_30 Internal 1044195 1044386 7.07 - 0 0 2.22 3.99 20.88 0.00 AA 374:437 chr6_cox_hap1_30 Internal 1044813 1044911 0.76 - 0 0 0.59 4.03 7.46 0.00 AA 341:373 chr6_cox_hap1_30 Internal 1045198 1045299 1.55 - 0 0 1.29 1.75 11.80 0.00 AA 307:340 chr6_cox_hap1_30 Internal 1046399 1046569 3.56 - 0 0 3.91 3.86 9.77 0.00 AA 250:306 chr6_cox_hap1_30 Internal 1046984 1047118 4.66 - 0 0 3.01 5.33 11.62 0.00 AA 205:249 chr6_cox_hap1_30 Internal 1050562 1050740 4.70 - 2 0 0.83 0.99 21.52 0.00 AA 145:204 chr6_cox_hap1_30 Internal 1053552 1053737 1.72 - 2 1 2.01 5.30 5.82 0.00 AA 83:145 chr6_cox_hap1_30 Internal 1054490 1054693 6.61 - 2 1 3.61 2.74 19.50 0.00 AA 15: 83 chr6_cox_hap1_30 First 1055776 1055818 -0.05 - 0 1 3.40 2.95 2.85 0.00 AA 1: 15 chr6_cox_hap1_30 >chr6_cox_hap1_30|geneid_v1.2_predicted_cDNA_30|2724_NN ATGGAATCGGGGAGCGCTGAGGCGGCCGATGCCGGGAGCGTGGGTTGCCAGATCATACAC CCGCCCTGGGAAGGGGGCATCAGGTACCGGGGCCTGACTCGGGACCAGGTGAAGGCTATC AACTTCCTGCCAGTGGACTATGAGATTGAGTATGTGTGCCGGGGGGAGCGCGAGGTGGTG GGGCCCAAGGTCCGCAAGTGCCTGGCCAACGGCTCCTGGACAGATATGGACACACCCAGC CGCTGTGTCCGAATCTGCTCCAAGTCTTATTTGACCCTGGAAAATGGGAAGGTTTTCCTG ACGGGTGGGGACCTCCCAGCTCTGGACGGAGCCCGGGTGGATTTCCGGTGTGACCCCGAC TTCCATCTGGTGGGCAGCTCCCGGAGCATCTGTAGTCAGGGCCAGTGGAGCACCCCCAAG CCCCACTGCCAGGAACGGCGCGCAGTGTACATCGGGGCACTGTTTCCCATGAGCGGGGGC TGGCCAGGGGGCCAGGCCTGCCAGCCCGCGGTGGAGATGGCGCTGGAGGACGTGAATAGC CGCAGGGACATCCTGCCGGACTATGAGCTCAAGCTCATCCACCACGACAGCAAGGTAGCC CTGGACATGGGGTGTGATCCAGGCCAAGCCACCAAGTACCTATATGAGCTGCTCTACAAC GACCCTATCAAGATCATCCTTATGCCTGGCTGCAGCTCTGTCTCCACGCTGGTGGCTGAG GCTGCTAGGATGTGGAACCTCATTGTGCTTTCCTATGGCTCCAGCTCACCAGCCCTGTCA AACCGGCAGCGTTTCCCCACTTTCTTCCGAACGCACCCATCAGCCACACTCCACAACCCT ACCCGCGTGAAACTCTTTGAAAAGTGGGGCTGGAAGAAGATTGCTACCATCCAGCAGACC ACTGAGGTCTTCACTTCGACTCTGGACGACCTGGAGGAACGAGTGAAGGAGGCTGGAATT GAGATTACTTTCCGCCAGAGTTTCTTCTCAGATCCAGCTGTGCCCGTCAAAAACCTGAAG CGCCAGGATGCCCGAATCATCGTGGGACTTTTCTATGAGACTGAAGCCCGGAAAGTTTTT TGTGAGGTGGAGTTGGATCTGAAGAGGGAGGGGCACTGGGTGTACAAGGAGCGTCTCTTT GGGAAGAAGTACGTCTGGTTCCTCATTGGGTGGTATGCTGACAATTGGTTCAAGATCTAC GACCCTTCTATCAACTGCACAGTGGATGAGATGACTGAGGCGGTGGAGGGCCACATCACA ACTGAGATTGTCATGCTGAATCCTGCCAATACCCGCAGCATTTCCAACATGACATCCCAG GAATTTGTGGAGAAACTAACCAAGCGACTGAAAAGACACCCTGAGGAGACAGGAGGCTTC CAGGAGGCACCGCTGGCCTATGATGCCATCTGGGCCTTGGCACTGGCCCTGAACAAGACA TCTGGAGGAGGCGGCCGTTCTGGTGTGCGCCTGGAGGACTTCAACTACAACAACCAGACC ATTACCGACCAAATCTACCGGGCAATGAACTCTTCGTCCTTTGAGGGTGTCTCTGGCCAT GTGGTGTTTGATGCCAGCGGCTCTCGGATGGCATGGACGCTTATCGAGCAGCTTCAGGGT GGCAGCTACAAGAAGATTGGCTACTATGACAGCACCAAGGATGATCTTTCCTGGTCCAAA ACAGATAAATGGATTGGAGGGTCCCCCCCAGCTGACCAGACCCTGGTCATCAAGACATTC CGCTTCCTGTCACAGAAACTCTTTATCTCCGTCTCAGTTCTCTCCAGCCTGGGCATTGTC CTAGCTGTTGTCTGTCTGTCCTTTAACATCTACAACTCACATGTCCGTTATATCCAGAAC TCACAGCCCAACCTGAACAACCTGACTGCTGTGGGCTGCTCACTGGCTTTAGCTGCTGTC TTCCCCCTGGGGCTCGATGGTTACCACATTGGGAGGAACCAGTTTCCTTTCGTCTGCCAG GCCCGCCTCTGGCTCCTGGGCCTGGGCTTTAGTCTGGGCTACGGTTCCATGTTCACCAAG ATTTGGTGGGTCCACACGGTCTTCACAAAGAAGGAAGAAAAGAAGGAGTGGAGGAAGACT CTGGAACCCTGGAAGCTGTATGCCACAGTGGGCCTGCTGGTGGGCATGGATGTCCTCACT CTCGCCATCTGGCAGATCGTGGACCCTCTGCACCGGACCATTGAGACATTTGCCAAGGAG GAACCTAAGGAAGATATTGACGTCTCTATTCTGCCCCAGCTGGAGCATTGCAGCTCCAGG AAGATGAATACATGGCTTGGCATTTTCTATGGTTACAAGGGGCTGCTGCTGCTGCTGGGA ATCTTCCTTGCTTATGAGACCAAGAGTGTGTCCACTGAGAAGATCAATGATCACCGGGCT GTGGGCATGGCTATCTACAATGTGGCAGTCCTGTGCCTCATCACTGCTCCTGTCACCATG ATTCTGTCCAGCCAGCAGGATGCAGCCTTTGCCTTTGCCTCTCTTGCCATAGTTTTCTCC TCCTATATCACTCTTGTTGTGCTCTTTGTGCCCAAGATGCGCAGGCTGATCACCCGAGGG GAATGGCAGTCGGAGGCGCAGGACACCATGAAGACAGGGTCATCGACCAACAACAACGAG GAGGAGAAGTCCCGGCTGTTGGAGAAGGAGAACCGTGAACTGGAAAAGATCATTGCTGAG GTGCGGGGGTGGGTGTCAGGGTAG >chr6_cox_hap1_30|geneid_v1.2_predicted_protein_30|908_AA MESGSAEAADAGSVGCQIIHPPWEGGIRYRGLTRDQVKAINFLPVDYEIEYVCRGEREVV GPKVRKCLANGSWTDMDTPSRCVRICSKSYLTLENGKVFLTGGDLPALDGARVDFRCDPD FHLVGSSRSICSQGQWSTPKPHCQERRAVYIGALFPMSGGWPGGQACQPAVEMALEDVNS RRDILPDYELKLIHHDSKVALDMGCDPGQATKYLYELLYNDPIKIILMPGCSSVSTLVAE AARMWNLIVLSYGSSSPALSNRQRFPTFFRTHPSATLHNPTRVKLFEKWGWKKIATIQQT TEVFTSTLDDLEERVKEAGIEITFRQSFFSDPAVPVKNLKRQDARIIVGLFYETEARKVF CEVELDLKREGHWVYKERLFGKKYVWFLIGWYADNWFKIYDPSINCTVDEMTEAVEGHIT TEIVMLNPANTRSISNMTSQEFVEKLTKRLKRHPEETGGFQEAPLAYDAIWALALALNKT SGGGGRSGVRLEDFNYNNQTITDQIYRAMNSSSFEGVSGHVVFDASGSRMAWTLIEQLQG GSYKKIGYYDSTKDDLSWSKTDKWIGGSPPADQTLVIKTFRFLSQKLFISVSVLSSLGIV LAVVCLSFNIYNSHVRYIQNSQPNLNNLTAVGCSLALAAVFPLGLDGYHIGRNQFPFVCQ ARLWLLGLGFSLGYGSMFTKIWWVHTVFTKKEEKKEWRKTLEPWKLYATVGLLVGMDVLT LAIWQIVDPLHRTIETFAKEEPKEDIDVSILPQLEHCSSRKMNTWLGIFYGYKGLLLLLG IFLAYETKSVSTEKINDHRAVGMAIYNVAVLCLITAPVTMILSSQQDAAFAFASLAIVFS SYITLVVLFVPKMRRLITRGEWQSEAQDTMKTGSSTNNNEEEKSRLLEKENRELEKIIAE VRGWVSG* # Gene 31 (Reverse). 1 exons. 127 aa. Score = 4.49 Single 1059052 1059432 4.49 - 0 0 0.00 6.17 15.84 0.00 AA 1:127 chr6_cox_hap1_31 >chr6_cox_hap1_31|geneid_v1.2_predicted_cDNA_31|381_NN ATGGCCGAAGAAAAGCCCAAGGAAGGAGTCAAGACTGAGAACAACGATCATATTAATTTG AAGGTGGCGGGGCAGGATGGTTCTGTGGTGCAGTTTAAGATTAAGAGGCATACACCACTT AGTAAACTAATGAAAGCCTATTGTGAACGACAGGGATTGTCAATGAGGCAGATCAGATTC CGATTCGACGGGCAACCAATGAAACAGACACACCTGCACAGTTGGAAATGGAGGATGAAG ATACAATTGATGTGTTCCAACAGCAGACGGGAGGTGTCTACTGAAAAGGGAACCTGCTTC TTTACTCCAGAACTCTGTTCTTTAAAGACCAAGATTACATTCTCAATTAGAAAACTGCAA TTTGCTTCCACCACATCCTGA >chr6_cox_hap1_31|geneid_v1.2_predicted_protein_31|127_AA MAEEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRF RFDGQPMKQTHLHSWKWRMKIQLMCSNSRREVSTEKGTCFFTPELCSLKTKITFSIRKLQ FASTTS* # Gene 32 (Forward). 6 exons. 129 aa. Score = 9.94 First 1072850 1072947 1.22 + 0 2 0.61 2.75 10.50 0.00 AA 1: 33 chr6_cox_hap1_32 Internal 1082538 1082749 6.47 + 1 1 3.39 5.20 15.81 0.00 AA 33:104 chr6_cox_hap1_32 Internal 1090721 1090741 1.77 + 2 1 6.22 4.03 1.54 0.00 AA 104:111 chr6_cox_hap1_32 Internal 1090982 1091002 1.70 + 2 1 5.69 4.04 2.15 0.00 AA 111:118 chr6_cox_hap1_32 Internal 1093779 1093799 0.70 + 2 1 6.92 2.50 0.12 0.00 AA 118:125 chr6_cox_hap1_32 Terminal 1094250 1094263 -1.92 + 2 0 5.49 0.00 -0.55 0.00 AA 125:129 chr6_cox_hap1_32 >chr6_cox_hap1_32|geneid_v1.2_predicted_cDNA_32|387_NN ATGATTGGCGAAGTGAAAGTTGCCCAGTTCCAAAATGGCCACCACCGCACTTTCCTGGCG TCGGAGCGACTACGTAGTGACAGAAGGACCATCAGCAGGGTGGTTCATCTCTACAGAAAT GGCAAGGACCAAGATGGAGACCAGGCACCTGAATATCGGGGCCGGACAGAGCTGCTGAAA GATGCTATTGGTGAGGGAAAGGTGACTCTCAGGATCCGGAATGTAAGGTTCTCAGATGAA GGAGGTTTCACCTGCTTCTTCCGAGATCATTCTTACCAAGAGGAGGCAGCAATGGAATTG AAAGTAGAAGGAAAACTTCGAGCAGAGATAGAGAATCTCCACCGGACTTTTGGGCAATTC CTTGAAGAGCTACGAAATCCCTTCTGA >chr6_cox_hap1_32|geneid_v1.2_predicted_protein_32|129_AA MIGEVKVAQFQNGHHRTFLASERLRSDRRTISRVVHLYRNGKDQDGDQAPEYRGRTELLK DAIGEGKVTLRIRNVRFSDEGGFTCFFRDHSYQEEAAMELKVEGKLRAEIENLHRTFGQF LEELRNPF* # Gene 33 (Reverse). 3 exons. 503 aa. Score = 10.23 Terminal 1095586 1096844 7.55 - 2 0 0.00 2.06 28.27 0.00 AA 84:503 chr6_cox_hap1_33 Internal 1099026 1099152 2.43 - 0 1 3.49 3.38 8.26 0.00 AA 42: 84 chr6_cox_hap1_33 First 1099994 1100116 0.26 - 0 0 3.69 0.55 6.79 0.00 AA 1: 41 chr6_cox_hap1_33 >chr6_cox_hap1_33|geneid_v1.2_predicted_cDNA_33|1509_NN ATGTTTGAACAGCTGAAGCCAATCGAACCTGTACAGAAGACGCTCCCATGGGTGGGCGAG GTAGCTGCCACCCTGCAGGAAGCCATGAAGAGAGATTGCTGGAGGGAGGCACGGGTGAAG AAGAAGCCAGTCACCTTTGAGGATGTGGCAGTGAATTTCACCCAGGAAGAGTGGGACTGT CTAGATGCCAGCCAGAGGGTCCTTTACCAGGATGTTATGTCGGAAACCTTTAAGAATCTA ACATCTGTGGAAGGCAAGAAGAAAGAGCTTCGAGAACAACATCCCAGTCTGAGAGATGAG GGGACTAGTGATGACAAGGTCTTCCTTGCATGCAGAGGGGCCGGCCAGTGCCCCCTATCT GCCCCAGCTGGGACTATGGACAGGACCCGGGTGCTTCAAGCATCCCAGGCTGGGCCACCC TTTTTTTGCTACACCTGTGGCAAATGTTTCAGCAGGCGCTCCTACCTCTATAGCCACCAG TTTGTTCACAATCCCAAGCTGACTAACAGCTGCAGTCAGTGTGGGAAGTTGTTTCGGAGC CCCAAGTCCCTCAGCTATCACAGACGCATGCATCTTGGGGAGAGGCCCTTCTGTTGCACG CTCTGTGACAAGACCTACTGTGATGCTTCTGGACTAAGTCGTCACCGCCGCGTCCATCTG GGTTACCGGCCCCATTCATGCTCTGTGTGTGGGAAGAGCTTCCGGGACCAGTCTGAGCTC AAACGCCACCAGAAGATACACCAAAACCAGGAGCCAGTGGATGGAAACCAGGAGTGTACT TTGAGGATTCCAGGCACCCAGGCTGAATTCCAGACACCCATCGCCAGAAGCCAGAGGTCC ATCCAGGGGCTTTTGGATGTGAACCATGCACCAGTGGCCAGGTCCCAGGAACCCATATTT AGAACTGAGGGTCCTATGGCCCAGAACCAGGCATCTGTACTTAAGAACCAAGCACCTGTG ACCAGGACCCAGGCACCCATCACTGGAACCCTCTGTCAGGATGCCAGATCCAACTCTCAT CCAGTGAAGCCCTCAAGACTCAATGTCTTCTGTTGCCCCCATTGTTCTTTGACTTTTAGC AAGAAATCCTATCTCTCCAGACACCAGAAGGCCCACCTCACAGAGCCGCCCAACTACTGC TTCCATTGCAGCAAGTCTTTCAGCTCATTTTCCAGGCTGGTCAGACACCAGCAGACCCAC TGGAAGCAGAAGAGCTACCTTTGCCCTATCTGTGACCTCTCCTTTGGGGAGAAAGAGGGC CTTATGGATCACTGGAGGGGCTATAAAGGCAAGGACCTGTGCCAGAGCAGCCACCATAAA TGCCGGGTGATCCTGGGCCAGTGGCTTGGCTTCTCTCATGATGTCCCCACTATGGCTGGG GAGGAATGGAAGCATGGAGGTGATCAATCTCCCCCCAGGATCCATACCCCCAGGAGAAGA GGCCTAAGAGAGAAGGCCTGCAAAGGAGACAAAACAAAGGAGGCAGTGAGCATCTTGAAA CATAAATAA >chr6_cox_hap1_33|geneid_v1.2_predicted_protein_33|503_AA MFEQLKPIEPVQKTLPWVGEVAATLQEAMKRDCWREARVKKKPVTFEDVAVNFTQEEWDC LDASQRVLYQDVMSETFKNLTSVEGKKKELREQHPSLRDEGTSDDKVFLACRGAGQCPLS APAGTMDRTRVLQASQAGPPFFCYTCGKCFSRRSYLYSHQFVHNPKLTNSCSQCGKLFRS PKSLSYHRRMHLGERPFCCTLCDKTYCDASGLSRHRRVHLGYRPHSCSVCGKSFRDQSEL KRHQKIHQNQEPVDGNQECTLRIPGTQAEFQTPIARSQRSIQGLLDVNHAPVARSQEPIF RTEGPMAQNQASVLKNQAPVTRTQAPITGTLCQDARSNSHPVKPSRLNVFCCPHCSLTFS KKSYLSRHQKAHLTEPPNYCFHCSKSFSSFSRLVRHQQTHWKQKSYLCPICDLSFGEKEG LMDHWRGYKGKDLCQSSHHKCRVILGQWLGFSHDVPTMAGEEWKHGGDQSPPRIHTPRRR GLREKACKGDKTKEAVSILKHK* # Gene 34 (Forward). 6 exons. 337 aa. Score = 21.32 First 1143937 1144000 0.31 + 0 1 3.32 3.65 2.82 0.00 AA 1: 22 chr6_cox_hap1_34 Internal 1144131 1144400 10.72 + 2 1 2.62 3.28 30.44 0.00 AA 22:112 chr6_cox_hap1_34 Internal 1144646 1144921 7.86 + 2 1 -4.63 1.71 36.54 0.00 AA 112:204 chr6_cox_hap1_34 Internal 1145920 1146036 2.65 + 2 1 4.83 3.03 7.33 0.00 AA 204:243 chr6_cox_hap1_34 Internal 1147352 1147473 0.22 + 2 0 4.95 2.79 1.43 0.00 AA 243:283 chr6_cox_hap1_34 Terminal 1169885 1170046 -0.44 + 0 0 5.92 0.00 2.53 0.00 AA 284:337 chr6_cox_hap1_34 >chr6_cox_hap1_34|geneid_v1.2_predicted_cDNA_34|1011_NN ATGGCGCCCCGAAGCCTCCTCCTGCTGCTCTCAGGGGCCCTGGCCCTGACCGATACTTGG GCGGGCTCCCACTCCTTGAGGTATTTCAGCACCGCTGTGTCGCGGCCCGGCCGCGGGGAG CCCCGCTACATCGCCGTGGAGTACGTAGACGACACGCAATTCCTGCGGTTCGACAGCGAC GCCGCGATTCCGAGGATGGAGCCGCGGGAGCCGTGGGTGGAGCAAGAGGGGCCGCAGTAT TGGGAGTGGACCACAGGGTACGCCAAGGCCAACGCACAGACTGACCGAGTGGCCCTGAGG AACCTGCTCCGCCGCTACAACCAGAGCGAGGCTGGGTCTCACACCCTCCAGGGAATGAAT GGCTGCGACATGGGGCCCGACGGACGCCTCCTCCGCGGGTATCACCAGCACGCGTACGAC GGCAAGGATTACATCTCCCTGAACGAGGACCTGCGCTCCTGGACCGCGGCGGACACCGTG GCTCAGATCACCCAGCGCTTCTATGAGGCAGAGGAATATGCAGAGGAGTTCAGGACCTAC CTGGAGGGCGAGTGCCTGGAGTTGCTCCGCAGATACTTGGAGAATGGGAAGGAGACGCTA CAGCGCGCAGAGCAGTCTCCCCAGCCCACCATCCCCATCGTGGGCATCGTTGCTGGCCTT GTTGTCCTTGGAGCTGTGGTCACTGGAGCTGTGGTCGCTGCTGTGATGTGGAGGAAGAAG AGCTCAGCCTACTCAGTGGTCAGCGGAAACTTGATGATAACATGGTGGTCAAGCTTATTT CTCCTGGGGGTGCTCTTCCAAGGATATTTGGGCTGCCTCCGGAGTCACAGTGTCTTGGGC CGCCGGAAGGACACACTTACAGAAGAGACGAGGCCTGGTTATTCTTCCAACACACTCCCC TCAGCCGCGCACAGCGTTACTGGCTATGTGGCCAGTGACCAGATTTGCAGACCTGTTTCC AGACCTCAGCTACCTCTGTTTCTGAAGCACCTGCCCCAGCTGATCCGCTAA >chr6_cox_hap1_34|geneid_v1.2_predicted_protein_34|337_AA MAPRSLLLLLSGALALTDTWAGSHSLRYFSTAVSRPGRGEPRYIAVEYVDDTQFLRFDSD AAIPRMEPREPWVEQEGPQYWEWTTGYAKANAQTDRVALRNLLRRYNQSEAGSHTLQGMN GCDMGPDGRLLRGYHQHAYDGKDYISLNEDLRSWTAADTVAQITQRFYEAEEYAEEFRTY LEGECLELLRRYLENGKETLQRAEQSPQPTIPIVGIVAGLVVLGAVVTGAVVAAVMWRKK SSAYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKDTLTEETRPGYSSNTLP SAAHSVTGYVASDQICRPVSRPQLPLFLKHLPQLIR* # Gene 35 (Forward). 5 exons. 209 aa. Score = 10.80 First 1183881 1183887 0.06 + 0 1 4.47 2.70 1.91 0.00 AA 1: 3 chr6_cox_hap1_35 Internal 1212619 1212699 0.73 + 2 1 0.94 4.94 5.49 0.00 AA 3: 30 chr6_cox_hap1_35 Internal 1212831 1213079 9.58 + 2 1 2.79 1.06 30.67 0.00 AA 30:113 chr6_cox_hap1_35 Internal 1221447 1221666 2.40 + 2 2 4.32 1.99 9.03 0.00 AA 113:186 chr6_cox_hap1_35 Terminal 1222563 1222632 -1.97 + 1 0 3.24 0.00 2.72 0.00 AA 186:209 chr6_cox_hap1_35 >chr6_cox_hap1_35|geneid_v1.2_predicted_cDNA_35|627_NN ATGGCGGTCGCCGAGGATGGTGTCATGGCGCCCCGAACCCTGCTTCTGCTGCTCTCGGGG GCCCTGGTCCTGACCCAGACCTGGGCAGGCTTCCACTCCTTGAGGTATTTCCACACCACC ATGTCCCGGCCCGGCCGCGCGGATCCCCGCTTCCTCTCCGTGGGCGACGTGGACGACACG CAGTGCGTGCGGCTCGACAGCGACGCCACGAGTCCCAGGATGGAGCCGGAGGGGCCGGAA TATTGGGAAGAGGAGACAGGGACCGCCAAGGCCAAAGCACAGTTTTACCGAGTGAACCTG CGGACCCTGAGCGGCTACTACAACCAGAGTGAGGCCTATCCCCTGAAGGCACAGGTAACC CACCACCCCATCTCCAACTATGAGGCCACGCTGAGGTGCTGGGCCCTGGGCTTCTACCCT CTGGAGATCACACTGACCCAGGAGCGGGATGGGGAGGACCAAATTCAGGATGCAGAGTTT GTGGAGACCAGACTTGCAGGGTACAGAACCTTCCAGAAGTGGGCAGCTGCAGTGGTGTCT TCTGGAGAGAAGCAGAGGAACAGTACCCAGGGCTCTGATGTGTCTCTCACGGCTTGTAAA AGTGACACCTTAGAGGGCCTGAAGTGA >chr6_cox_hap1_35|geneid_v1.2_predicted_protein_35|209_AA MAVAEDGVMAPRTLLLLLSGALVLTQTWAGFHSLRYFHTTMSRPGRADPRFLSVGDVDDT QCVRLDSDATSPRMEPEGPEYWEEETGTAKAKAQFYRVNLRTLSGYYNQSEAYPLKAQVT HHPISNYEATLRCWALGFYPLEITLTQERDGEDQIQDAEFVETRLAGYRTFQKWAAAVVS SGEKQRNSTQGSDVSLTACKSDTLEGLK* # Gene 36 (Reverse). 1 exons. 193 aa. Score = 5.70 Single 1223598 1224176 5.70 - 0 0 0.00 0.23 26.39 0.00 AA 1:193 chr6_cox_hap1_36 >chr6_cox_hap1_36|geneid_v1.2_predicted_cDNA_36|579_NN ATGCCAAAAGGAAAGAAGGCCAAGGAGAAGAAGGTGGCTCCAGCCCCTGCTGTCGTGAAG AAGCAGGAGGCCAAGAAAGTGGTAAATCCCTTGTTTGAGAAAAGGCCTAAGAATCTTGGC ACTGGACAGGATATCCAGCCCAAAAGACACCTCACCCACTTTGTGAAATGGCCCTGCTAT ATCAGGTTGCAGCAGCAGAGAACCATCCTCTATAAGTGGCTGAAAGTGCCTCCTGAGATT AACCAGTTCACCCAGGCACCAGACAGCCAAACAGCTACTCTGCTGCTTAAGCTGGCCCAC AATACAGACCAGAGACAAACCAAGAGAAGAAGCAGAGGCTGTTGGCCTGGGCCAAGAAGA AAGCTGCTGGCAAAGGGGACATTCCCCACTAAGAGTCCACCTGTCCTTCGAGCAGGAGTT AACACCATCACCACCTTGGTGGAGAACAAGAAAGCTCAGCTGGTGGTGATTGCACATGAT GTAGATCCCATCAAGCTGGTTGTCTTCTTGCCTGTCCTGTGTCATAAAATGGGGTCCCTT ACTGCATTATCAAAGGGAAGGCAAGACTGGGACATCTAG >chr6_cox_hap1_36|geneid_v1.2_predicted_protein_36|193_AA MPKGKKAKEKKVAPAPAVVKKQEAKKVVNPLFEKRPKNLGTGQDIQPKRHLTHFVKWPCY IRLQQQRTILYKWLKVPPEINQFTQAPDSQTATLLLKLAHNTDQRQTKRRSRGCWPGPRR KLLAKGTFPTKSPPVLRAGVNTITTLVENKKAQLVVIAHDVDPIKLVVFLPVLCHKMGSL TALSKGRQDWDI* # Gene 37 (Forward). 6 exons. 346 aa. Score = 20.11 First 1248020 1248092 -0.97 + 0 1 0.18 3.65 4.34 0.00 AA 1: 25 chr6_cox_hap1_37 Internal 1248222 1248491 12.26 + 2 1 3.99 1.66 34.67 0.00 AA 25:115 chr6_cox_hap1_37 Internal 1248706 1248993 5.59 + 2 1 -5.37 0.41 33.91 0.00 AA 115:211 chr6_cox_hap1_37 Internal 1249593 1249868 3.33 + 2 1 4.05 0.81 13.52 0.00 AA 211:303 chr6_cox_hap1_37 Internal 1250054 1250107 0.83 + 2 1 4.65 4.37 1.05 0.00 AA 303:321 chr6_cox_hap1_37 Terminal 1255381 1255457 -0.92 + 2 0 3.07 0.00 6.96 0.00 AA 321:346 chr6_cox_hap1_37 >chr6_cox_hap1_37|geneid_v1.2_predicted_cDNA_37|1038_NN ATGGTGGTCATGGCACCCCGAACCCTCTTCCTGCTACTCTCGGGGGCCCTGACCCTGACC GAGACCTGGGCGGGCTCCCACTCCATGAGGTATTTCAGCGCCGCCGTGTCCCGGCCCGGC CGCGGGGAGCCCCGCTTCATCGCCATGGGCTACGTGGACGACACGCAGTTCGTGCGGTTC GACAGCGACTCGGCGTGTCCGAGGATGGAGCCGCGGGCGCCGTGGGTGGAGCAGGAGGGG CCAGAGTATTGGGAAGAGGAGACACGGAACACCAAGGCCCACGCACAGACTGACAGAATG AACCTGCAGACCCTGCGCGGCTACTACAACCAGAGCGAGGCCAGGGTGGGGCCAGGTTCT CATACCCTCCAGTGGATGATTGGCTGCGACCTGGGGTCCGACGGACGCCTCCTCCGCGGG TATGAACAGTATGCCTACGATGGCAAGGATTACCTCGCCCTGAACGAGGACCTGCGCTCC TGGACCGCAGCGGACACTGCGGCTCAGATCTCCAAGCGCAAGTGTGAGGCGGCCAATGTG GCTGAACAAAGGAGAGCCTACCTGGAGGGCACGTGCGTGGAGTGGCTCCACAGATACCTG GAGAACGGGAAGGAGATGCTGCAGCGCGCGGACCCCCCCAAGACACACGTGACCCACCAC CCTGTCTTTGACTATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAG ATCATACTGACCTGGCAGCGGGATGGGGAGGACCAGACCCAGGACGTGGAGCTCGTGGAG ACCAGGCCTGCAGGGGATGGAACCTTCCAGAAGTGGGCAGCTGTGGTGGTGCCTTCTGGA GAGGAGCAGAGATACACGTGCCATGTGCAGCATGAGGGGCTGCCGGAGCCCCTCATGCTG AGATGGACTGTAGTCACTGGAGCTGCGGTCGCTGCTGTGCTGTGGAGGAAGAAGAGCTCA GTTCCGGCCAGTACCCTCCCTCGACTCCATCAACATCAGTACCTGCCAGATGCCCAGCAC CCACCATGTGAGGAGTGA >chr6_cox_hap1_37|geneid_v1.2_predicted_protein_37|346_AA MVVMAPRTLFLLLSGALTLTETWAGSHSMRYFSAAVSRPGRGEPRFIAMGYVDDTQFVRF DSDSACPRMEPRAPWVEQEGPEYWEEETRNTKAHAQTDRMNLQTLRGYYNQSEARVGPGS HTLQWMIGCDLGSDGRLLRGYEQYAYDGKDYLALNEDLRSWTAADTAAQISKRKCEAANV AEQRRAYLEGTCVEWLHRYLENGKEMLQRADPPKTHVTHHPVFDYEATLRCWALGFYPAE IILTWQRDGEDQTQDVELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLML RWTVVTGAAVAAVLWRKKSSVPASTLPRLHQHQYLPDAQHPPCEE* # Gene 38 (Reverse). 2 exons. 519 aa. Score = 3.24 Terminal 1268647 1270197 5.22 - 0 0 0.00 -5.87 34.35 0.00 AA 3:519 chr6_cox_hap1_38 First 1290032 1290037 -1.98 - 0 0 3.87 1.39 1.02 0.00 AA 1: 2 chr6_cox_hap1_38 >chr6_cox_hap1_38|geneid_v1.2_predicted_cDNA_38|1557_NN ATGGAGTCCAGCTCGCAGGAGGAGGAGGTCATCGACGGCTTCGCCATCGCCAGCTTCAGC ACCCTGGAGGCCCTGGAGAAGGATATGGCCCTGAAGCCACATGAGCGGAAGGAGAAGTGG GAGCGTCGTCTCATCAAGAAGCCCCGGGAGTCGGAAACCTGCCCCCCTGCGGAGCCCAGT GAGAACAGGCGGCCCCTGGAGGCAGGCAGCCCCGGGCAGGACCTCGAACCCGCCTGCGAT GGGGCGAGAAAGGTCCCACTGCAGCCCTCCAAGCAGGTGTGCTCCCCAGAAGGGGGGCCG CTCCCAGCCAGCCACTGGGACCAGAACGGCCCGGCCCAGCGCCAGCAACAGCTCCAGCCC AGCCAGTCCAGCCAGCCCCAGGGGTCCCTCCCAGCCCCGTCGGCACTCCCGGACCCTGGG CAGCCCTGCCAGCCCTCCCAGCGGCCACTCCTGGGTCAGCGCAGCTGGCCCCAGCGGTCA CTTCTGGGCCTGAAACAGCCCTGCCAGCCCCGGCGGTCACTTCTGGGCCCCGGTCAGCCC TGCCGGCCCCAGCGGCTCCTTCCATCCCCAGATCAGCTCTGCCAGCCCCAGCGGTCACGC CCGGCCCAGCCCTGCCGGCCGCATTGGGCACTCCCAGGCCCCAGGCAGTGCTGCAGGCGC CTGCGGTCCCTGCTGACCCCGTGTCACCACTGCCGGCGCCTGCGGTCCCTCCTGGCCCCA CGGTCCCTCCTGGTCCCCTGCCTCTACTGCCGGCGCCTGCGGTTCCTCCTGGCCCCAAGG CACCGCTGCAGGCGCCTGCGGTCCCTGCTGACCCTGTGGCACCGCTGCCGACCCCTGCGG CCGTGGGCCAGCCCGTGTCACTGTGGCCAGCCCGGTAGGGCATCCTCAGGACAGCGCAGC CGGCCCCTGTGGTCGCTGCTAGCCCAGTGCCAGCGGTACCAGCCCCCGCGGCCACTCCTC ACCCTCCGACCACGCCGACGGCCCGCCAGCTTCCTCCCAGGACAGTGCTGCTGCCCCCGG CGGGCCTTCCTAGCCCCGTGTCAGTACGGCCAGCCCCGAAGGTCCCTGCTGGGCCAGCCC AGCCGCCCCCGGCGGTCGCTGCTGCGCCCCAGGCAGCCCCAGCGGTTAGTGGAAGCCCCA GAGCAGCCCGGCCCACTCACGCCTTCACTCCTGGGCCCGGGACGGCCGAGGCAGCAGAAG CAGCCGCTCATGGGCCCGGAGCAGCCCTGCCCACCCAAGCGGCCGCTCATGGGCCCAGAG CAGCCCTGCCAGCCCCTGCGGCCGCTCATGGGCCCCAACAAGCCCTGCAAACCCCAGCCG TTGCTCCCCATTCCCGATCGCCCTTCACTCCTGGGGCAGCCGGGCCCACCCTGCCGGCCT CTCCTGGGGCTCCTGTGCCAGCCGCGGCGGTCCCTATTGGATCTGGTGCCGGCCCGTCAG CCCCGGCTCTCGCTCCTGGCCCTGGGCCATCCCTGCCGGCCCCTGCGGTCCCGGTGGACC CGATCCTGTGCCCCCGGGATGGCCCGTCAGGCCCCATCTGTGAGCCCTGGAGCCTGA >chr6_cox_hap1_38|geneid_v1.2_predicted_protein_38|519_AA MESSSQEEEVIDGFAIASFSTLEALEKDMALKPHERKEKWERRLIKKPRESETCPPAEPS ENRRPLEAGSPGQDLEPACDGARKVPLQPSKQVCSPEGGPLPASHWDQNGPAQRQQQLQP SQSSQPQGSLPAPSALPDPGQPCQPSQRPLLGQRSWPQRSLLGLKQPCQPRRSLLGPGQP CRPQRLLPSPDQLCQPQRSRPAQPCRPHWALPGPRQCCRRLRSLLTPCHHCRRLRSLLAP RSLLVPCLYCRRLRFLLAPRHRCRRLRSLLTLWHRCRPLRPWASPCHCGQPGRASSGQRS RPLWSLLAQCQRYQPPRPLLTLRPRRRPASFLPGQCCCPRRAFLAPCQYGQPRRSLLGQP SRPRRSLLRPRQPQRLVEAPEQPGPLTPSLLGPGRPRQQKQPLMGPEQPCPPKRPLMGPE QPCQPLRPLMGPNKPCKPQPLLPIPDRPSLLGQPGPPCRPLLGLLCQPRRSLLDLVPARQ PRLSLLALGHPCRPLRSRWTRSCAPGMARQAPSVSPGA* # Gene 39 (Forward). 5 exons. 290 aa. Score = 32.85 First 1306007 1306244 14.98 + 0 1 3.79 4.68 37.25 0.00 AA 1: 80 chr6_cox_hap1_39 Internal 1306487 1306762 10.21 + 2 1 -5.17 0.41 45.15 0.00 AA 80:172 chr6_cox_hap1_39 Internal 1307725 1307841 2.60 + 2 1 4.21 4.37 6.13 0.00 AA 172:211 chr6_cox_hap1_39 Internal 1314971 1315072 0.57 + 2 1 4.59 3.03 2.50 0.00 AA 211:245 chr6_cox_hap1_39 Terminal 1344624 1344760 4.50 + 2 0 3.44 0.00 18.57 0.00 AA 245:290 chr6_cox_hap1_39 >chr6_cox_hap1_39|geneid_v1.2_predicted_cDNA_39|870_NN ATGTCCCGGCCCGGCCGCGGGGAGCCCCGCTTCATCTCCGTCGGCTACGTGGACGATACG CAGTTCGTGCGGTTCGACAGCGACGACGCGAGTCCGAGAGAGGAGCCGCGGGCGCCGTGG ATGGAGCGGGAGGGGCCGGAGTATTGGGACCGGAACACACAGATCTGCAAGGCCCAAGCA CGGACTGAACGAGAGAACCTGCGGATCGCGCTCCGCTACTACAACCAGAGCGAGGGCGGT TCTCACACCATGCAGGTGATGTATGGCTGCGACGTGGGGCCCGACGGGCGCTTCCTCTGC GGGTATGAACAGCACGCCTACGACGGCAAGGATTACATCGCTCTGAACGAGGACCTGCGC TCCTGGACCGCGGCGGACATGGCAGCTCAGATCACCAAGCGCAAGTGGGAGGCGGCCCGT CGGGCGGAGCAGCGGAGAGTCTACCTGGAGGGCGAGTTCGTGGAGTGGCTCCGCAGATAC CTGGAGAACGGGAAGGAGACGCTGCAGCGCGCGGAGCCATCTTCCCAGCCCACCATCCCC ATCGTGGGCATCGTTGCTGGCCTGGTTCTACTTGTAGCTGTGGTCACTGGAGCTGTGGTC GCTGCTGTAATGTGGAGGAAGAAGAGCTCAGGGCCATCTTCCCAGCCCACATTCCTCATC ATGGGCATCGTTACCGTCCTGGTTGTTCTAGGTGCTGTGGTCACTGCTGTGATGTGGAAG AATAAGACCCCAGGTACCCACTCCATAAGGTATTTCAGCACCGCCGTGTCCCGGCCGGGT CGCGGGGAGCCCCGGTACATCGCAGTGGGCTACGTGGACGACACGCAGTTCGTGCGGTTC GACAGCGACGCGGCGACTCCGAGGATGTAG >chr6_cox_hap1_39|geneid_v1.2_predicted_protein_39|290_AA MSRPGRGEPRFISVGYVDDTQFVRFDSDDASPREEPRAPWMEREGPEYWDRNTQICKAQA RTERENLRIALRYYNQSEGGSHTMQVMYGCDVGPDGRFLCGYEQHAYDGKDYIALNEDLR SWTAADMAAQITKRKWEAARRAEQRRVYLEGEFVEWLRRYLENGKETLQRAEPSSQPTIP IVGIVAGLVLLVAVVTGAVVAAVMWRKKSSGPSSQPTFLIMGIVTVLVVLGAVVTAVMWK NKTPGTHSIRYFSTAVSRPGRGEPRYIAVGYVDDTQFVRFDSDAATPRM* # Gene 40 (Forward). 1 exons. 55 aa. Score = 4.60 Single 1350362 1350526 4.60 + 0 0 6.95 0.00 13.57 0.00 AA 1: 55 chr6_cox_hap1_40 >chr6_cox_hap1_40|geneid_v1.2_predicted_cDNA_40|165_NN ATGGCGGCTCAGATTACCCAGCGCAAGTGGGAGGCGGCCCATGAGGCGGAGCAGCAGAGA GCCTACCTGGAGGGCACGTGCGTGGAGTGGCTCCGCAGATACCTGGAGAACGGGAAGGAG ACGCTGCAGCGCACTGGTACCAGGGGCCACGGGGCGCCTCCCTGA >chr6_cox_hap1_40|geneid_v1.2_predicted_protein_40|55_AA MAAQITQRKWEAAHEAEQQRAYLEGTCVEWLRRYLENGKETLQRTGTRGHGAPP* # Gene 41 (Forward). 6 exons. 465 aa. Score = 30.48 First 1358589 1358661 0.81 + 0 1 3.44 3.65 3.89 0.00 AA 1: 25 chr6_cox_hap1_41 Internal 1358792 1359061 13.44 + 2 1 0.97 4.61 37.73 0.00 AA 25:115 chr6_cox_hap1_41 Internal 1359303 1359578 11.48 + 2 1 -3.15 0.41 45.31 0.00 AA 115:207 chr6_cox_hap1_41 Internal 1360158 1360433 0.86 + 2 1 2.59 2.45 7.09 0.00 AA 207:299 chr6_cox_hap1_41 Internal 1360536 1360663 0.03 + 2 0 4.67 -0.00 5.56 0.00 AA 299:341 chr6_cox_hap1_41 Terminal 1392876 1393247 3.86 + 0 0 0.73 0.00 21.05 0.00 AA 342:465 chr6_cox_hap1_41 >chr6_cox_hap1_41|geneid_v1.2_predicted_cDNA_41|1395_NN ATGGCCGTCATGGCGCCCCGAACCCTCCTCCTGCTACTCTCGGGGGCCCTGGCCCTGACC CAGACCTGGGCGGGCTCCCACTCCATGAGGTATTTCTTCACATCCGTGTCCCGGCCCGGC CGCGGGGAGCCCCGCTTCATCGCCGTGGGCTACGTGGACGACACGCAGTTCGTGCGGTTC GACAGCGACGCCGCGAGCCAGAAGATGGAGCCGCGGGCGCCGTGGATAGAGCAGGAGGGG CCGGAGTATTGGGACCAGGAGACACGGAATATGAAGGCCCACTCACAGACTGACCGAGCG AACCTGGGGACCCTGCGCGGCTACTACAACCAGAGCGAGGACGGTTCTCACACCATCCAG ATAATGTATGGCTGCGACGTGGGGCCGGACGGGCGCTTCCTCCGCGGGTACCGGCAGGAC GCCTACGACGGCAAGGATTACATCGCCCTGAACGAGGACCTGCGCTCTTGGACCGCGGCG GACATGGCAGCTCAGATCACCAAGCGCAAGTGGGAGGCGGTCCATGCGGCGGAGCAGCGG AGAGTCTACCTGGAGGGCCGGTGCGTGGACGGGCTCCGCAGATACCTGGAGAACGGGAAG GAGACGCTGCAGCGCACGGACCCCCCCAAGACACATATGACCCACCACCCCATCTCTGAC CATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACACTGACC TGGCAGCGGGATGGGGAGGACCAGACCCAGGACACGGAGCTCGTGGAGACCAGGCCTGCA GGGGATGGAACCTTCCAGAAGTGGGCGGCTGTGGTGGTGCCTTCTGGAGAGGAGCAGAGA TACACCTGCCATGTGCAGCATGAGGGTCTGCCCAAGCCCCTCACCCTGAGATGGGAGCTG TCTTCCCAGCCCACCATCCCCATCGTGGGCATCATTGCTGGCCTGGTTCTCCTTGGAGCT GTGATCACTGGAGCTGTGGTCGCTGCCGTGATGTGGAGGAGGAAGAGCTCAGGTGGAGAA GGGCTGCGCGGCACTCACACCTGCCGCTGTGAAAATGCAGACCCGCGGGGCAGGAATTCC GAGTCCGGGCTGGAGCGCGATCTGGAATCTGACTCGCTTGAAACAGCACCGCGGTGGATT CGGAGCCGGGTGAGCAGGGAACTGCGCCTCAGCCCCTCCCACGGGCCGCCCACTGATTCC AGGATCCGAAAACGCTTCCAGCTGCTCCGTCACCCCAGGAAGGCAGCGCCGGCCTCTGGG CGGTTCTGGTGGAAACGGGCTCCGCCGCCCGCAGGAAAACTCACAACTAAGGGACCAGGA AAAAGCCTCTCAGGGTCGCGCGCCTTCAGTGAGGATCCTAATTTACACCCCGAGTGTGGC CCCGTCAAAGACTAG >chr6_cox_hap1_41|geneid_v1.2_predicted_protein_41|465_AA MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRF DSDAASQKMEPRAPWIEQEGPEYWDQETRNMKAHSQTDRANLGTLRGYYNQSEDGSHTIQ IMYGCDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAVHAAEQR RVYLEGRCVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLT WQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEL SSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSGGEGLRGTHTCRCENADPRGRNS ESGLERDLESDSLETAPRWIRSRVSRELRLSPSHGPPTDSRIRKRFQLLRHPRKAAPASG RFWWKRAPPPAGKLTTKGPGKSLSGSRAFSEDPNLHPECGPVKD* # Gene 42 (Forward). 2 exons. 67 aa. Score = 0.48 First 1409267 1409332 1.37 + 0 0 0.83 4.32 8.21 0.00 AA 1: 22 chr6_cox_hap1_42 Terminal 1409472 1409606 -0.89 + 0 0 6.01 0.00 1.26 0.00 AA 23: 67 chr6_cox_hap1_42 >chr6_cox_hap1_42|geneid_v1.2_predicted_cDNA_42|201_NN ATGGAGCAGGTGAACACTGCCTTTACCTGTGACATGCCTGAAGATTCTGAGACCTACGTG AATCAGGTGACTAGAGCAGGCTGGTTTGGAACGGGGCTTGTGTCGGATGAGAATTGTGCC AGGATCCTCAGTGATGGGCAGCATCACTTTAAGTTCAGTGTTAGGAGCTACCTGCTGAGA CAGACGTCTCCTCCACAGTGA >chr6_cox_hap1_42|geneid_v1.2_predicted_protein_42|67_AA MEQVNTAFTCDMPEDSETYVNQVTRAGWFGTGLVSDENCARILSDGQHHFKFSVRSYLLR QTSPPQ* # Gene 43 (Forward). 4 exons. 283 aa. Score = 19.98 First 1422604 1422667 0.82 + 0 1 3.32 3.65 4.11 0.00 AA 1: 22 chr6_cox_hap1_43 Internal 1422798 1423067 11.28 + 2 1 2.62 3.65 31.28 0.00 AA 22:112 chr6_cox_hap1_43 Internal 1423316 1423591 8.46 + 2 1 -4.27 0.41 39.44 0.00 AA 112:204 chr6_cox_hap1_43 Terminal 1449113 1449351 -0.58 + 2 0 0.15 0.00 12.20 0.00 AA 204:283 chr6_cox_hap1_43 >chr6_cox_hap1_43|geneid_v1.2_predicted_cDNA_43|849_NN ATGGCGCCCCGAACCCTCCTCCTGCTGCTCTCGGGGACCCTGGCCCTGGCCGAGACCTGG GCGGGCTCCCACTCCATGAGGTATTTCAGCACCGCCGTTTCCTGGCCGGGCCGCGGGGAG CCCAGCTTCATTGCCGTGGGCTACGTGGACGACACGCAGTTCGTGCGGGTCGACAGTGAC GCCGTGAGTCTGAGGATGAAGACGCGGGCGCGGTGGGTGGAGCAGGAGGGGCCGGAGTAT TGGGACCTACAGACACTGGGCGCCAAGGCCCAGGCACAGACTGACCGAGTGAACCTGCGG ACCCTGCTCCGCTACTACAACCAGAGCGAGGCGGGGTATCACATCCTCCAGGGAATGTTT GGCTGCGACCTGGGGCCCGACGGGCGTCTCCTCCGCGGGTATGAGCAGTATGCCTACGAC GGCAAGGATTACATCGCCCTGAACGAGGACCTGCGCTCCTGGACCGCCGCGGATACCGCG GCTCAGATTACCCAGCGCAAGTATGAGGCGGCCAATGTGGCTGAGCAAAGGAGAGCCTAC CTGGAGGGCACCTGCATGGAGTGGCTCCGCAGACACCTGGAGAACGGGAAGGAGACGCTG CAGCGCGCGGACAAAGAGACCAGGCAGGAACATGCGCTTATCAAGAGCATGCCCCTGTTG AAATGGTTTGCTAACAACTATAAAAAAGTCGGAGCTACATTGGAAATTGTCACATATAAA TCACAAGAAGGGTCTCAGTTTGTGAAAGGATTTGGTAGAATTGGAGGTCTCTTGTGGTAC CAAGTGGATTTCCAAAGAATGGAATACCAAGGAGGAGACGATGAATTTTTTTACCTTGAT GACTACTAG >chr6_cox_hap1_43|geneid_v1.2_predicted_protein_43|283_AA MAPRTLLLLLSGTLALAETWAGSHSMRYFSTAVSWPGRGEPSFIAVGYVDDTQFVRVDSD AVSLRMKTRARWVEQEGPEYWDLQTLGAKAQAQTDRVNLRTLLRYYNQSEAGYHILQGMF GCDLGPDGRLLRGYEQYAYDGKDYIALNEDLRSWTAADTAAQITQRKYEAANVAEQRRAY LEGTCMEWLRRHLENGKETLQRADKETRQEHALIKSMPLLKWFANNYKKVGATLEIVTYK SQEGSQFVKGFGRIGGLLWYQVDFQRMEYQGGDDEFFYLDDY* # Gene 44 (Reverse). 1 exons. 188 aa. Score = 6.60 Single 1473355 1473918 6.60 - 0 0 0.00 1.75 27.76 0.00 AA 1:188 chr6_cox_hap1_44 >chr6_cox_hap1_44|geneid_v1.2_predicted_cDNA_44|564_NN ATGGAGGAGAAAACAACCCAGAGCGTAGAAGGACTAAAACAGTACTGTTTGGTACCTGAG AGAGAGATGAAACACATAGAAAGGCACATACATCAAACAGGAAAGGCTGGAGAATTTAAG AACAAACCATTTAGACAAGTACTACAACCCCCCAATGAAACAAAATTACCAAAAATTATG CCAGAAGGGCATGGCATCCAGAACGCACAGAGAAGAAAGCAGGTAAATGAGAGGGAACAG ATGCAGACTAAGGATCACCAGGAACGCATGATTCGAGGGAGAGAACTTGCAGAACAAAGA CTCAAGGAGAGAATCTTGAGAAGAAGCCAGAGCCAGCTACTTACATATGAGAAGCATGAG AGAGTAAAAGAGATAAAGGAGTTTGAAAGAGTTATTGCGTATCTTCTTTTCCAACCATGC AGTAGAAGTCGGATTAAAGTGAGTATTCTTATGGATAAGTCTCAGAATGGAGAGAAGGTG AATACAATTGTGAAACCATATCAAAGAAAATTCTTGGCAATGCCACCCTTTTTAAGAAGT CAAATAGGAAAAATAAGAGATTAA >chr6_cox_hap1_44|geneid_v1.2_predicted_protein_44|188_AA MEEKTTQSVEGLKQYCLVPEREMKHIERHIHQTGKAGEFKNKPFRQVLQPPNETKLPKIM PEGHGIQNAQRRKQVNEREQMQTKDHQERMIRGRELAEQRLKERILRRSQSQLLTYEKHE RVKEIKEFERVIAYLLFQPCSRSRIKVSILMDKSQNGEKVNTIVKPYQRKFLAMPPFLRS QIGKIRD* # Gene 45 (Reverse). 1 exons. 185 aa. Score = 0.66 Single 1474448 1475002 0.66 - 0 0 0.00 -0.98 17.00 0.00 AA 1:185 chr6_cox_hap1_45 >chr6_cox_hap1_45|geneid_v1.2_predicted_cDNA_45|555_NN ATGCTGTATGTGCTGATAGAGTCAGAGAGGGCCCGGATCAAGAAACTGCAGGAAGAGAAA ACTAGAAACCTAGAATCGTCTAGAAAACTAGAACCTACAATCGTCTCAGAACACAAAGGA GGCTTGAGGACTGAGCAGACTGACATAGATGTACTTGGACAACACCTCACCAAGGAGCAT GTCTCTTCCCACTCACAATCCCCAATACGAGATTCACAGTGGTTCACGCTGAGTCCACAG GAAAAGTATGCTTGTTCATATGAAAGGAAAGATCCTCTTATTAAAAGAGCATTCATTATT TTCTACCATAGGAATGCAGTGGTTTCCCATGGGGGAAATGGCCCTGCTGTAGTCCTCCCT ATTAGCAGATTTGTTCTGACACCTCCTACATTTGAATCTACCTTGCCTTTTTTATCTTCC AGATTGGCCTGGGGTACATCATCTAAAGATCCTAGGATTGCTGCAGGTCAGCAGTCTCCA CTGGAAAAAAAGATCTTGGTAAGTAAATTATCTTCACATCATACAGTTTGGAACTACACA GAGAAGGAATCTTAG >chr6_cox_hap1_45|geneid_v1.2_predicted_protein_45|185_AA MLYVLIESERARIKKLQEEKTRNLESSRKLEPTIVSEHKGGLRTEQTDIDVLGQHLTKEH VSSHSQSPIRDSQWFTLSPQEKYACSYERKDPLIKRAFIIFYHRNAVVSHGGNGPAVVLP ISRFVLTPPTFESTLPFLSSRLAWGTSSKDPRIAAGQQSPLEKKILVSKLSSHHTVWNYT EKES* # Gene 46 (Forward). 3 exons. 128 aa. Score = 7.00 First 1477924 1478059 1.58 + 0 1 1.66 1.75 11.36 0.00 AA 1: 46 chr6_cox_hap1_46 Internal 1483483 1483613 2.85 + 2 0 6.05 -1.06 12.15 0.00 AA 46: 89 chr6_cox_hap1_46 Terminal 1484974 1485090 2.56 + 0 0 3.00 0.00 14.40 0.00 AA 90:128 chr6_cox_hap1_46 >chr6_cox_hap1_46|geneid_v1.2_predicted_cDNA_46|384_NN ATGGACCTCGCCAATACTTGCTCCAGCTTTCAGTCGGACCTGGATTTCTGTTCAGATTGC GGCTCGGTCCTGCCTCTGCCCGGGGCTCAGGATACGGTCACCTGTATTCGCTGTGGCTTC AACATCAACGTTCGGGCGCCTGCGCGCTGTCACGTTACGGCGGAACTAATCCAGCGACGC CTGCGCTTTGACGCATTTGGTGCCGTGGAAGGGAAAAAGGGGGACTGCAGTATGCGTCAC ACCCGGAAGCGGCGAGCCGGAAGTGGGGAGAACCGGAGCCTTACCATCAAACTTCGGAAA CGGAAGCCAGAGAAAAAGGTAGAATGGACAAGTGACACTGTGGACAATGAACACATGGGC CGCCGCTCATCCAAATGTGAGTAA >chr6_cox_hap1_46|geneid_v1.2_predicted_protein_46|128_AA MDLANTCSSFQSDLDFCSDCGSVLPLPGAQDTVTCIRCGFNINVRAPARCHVTAELIQRR LRFDAFGAVEGKKGDCSMRHTRKRRAGSGENRSLTIKLRKRKPEKKVEWTSDTVDNEHMG RRSSKCE* # Gene 47 (Reverse). 4 exons. 353 aa. Score = 24.93 Terminal 1487495 1488075 15.01 - 2 0 0.00 3.59 44.64 0.00 AA 160:353 chr6_cox_hap1_47 Internal 1489541 1489632 1.74 - 1 1 4.37 3.24 5.44 0.00 AA 129:160 chr6_cox_hap1_47 Internal 1489840 1489862 -0.03 - 0 2 4.06 3.92 0.46 0.00 AA 122:129 chr6_cox_hap1_47 First 1491607 1491969 8.21 - 0 0 4.21 1.79 24.03 0.00 AA 1:121 chr6_cox_hap1_47 >chr6_cox_hap1_47|geneid_v1.2_predicted_cDNA_47|1059_NN ATGGATGCGCCCGAGCTGGGCCCGGGGCTGGTGGAGCGTCTGGAGCAGCTGGCGACGTGT CCTCTGTGCGGGGGCTCCTTCGAGGACCCGGTGCTTCTGGCGTGCGAGCACAGCTTCTGC CGCGCGTGTCTGGCCCGCCGCTGGGGGACTCCGCCGGCGACCGGCACCGAGGCTTCCCCC ACCGCCTGTCCCTGCTGCGGCCTGCCGTGTCCCCGCCGCAGCCTGAGGTCTAATGTGCGG CTGGCGGTGGAGGTGCGAATCAGCCGCGAGCTGCGAGAGAAGCTGGCTGAGCCTGGGGCC CGTGCGGGGAGACGCCGAGGGGGGCGCATCCCCACCATGGGCTGCCTGGACCTGCCCGGA GAGGATATGAGGAAGACATGGAGACGATTTGAAGTCCCAACATCCAAGTCATCTAATTCA GAGGATGATCTCCCTGAAGATTATCCAGTGGTCAAAAAAATGCTTCATAGACTGACAGCC GACCTGACCCTGGACCCTGGGACCGCACACCGCCGCCTGCTCATCTCCGCCGACCGCCGC AGCGTACAACTGGCCCCACCAGGGACGCCCGCGCCCCCTGACGGCCCCAAGCGCTTCGAT CAGCTCCCAGCTGTGCTGGGTGCGCAGGGCTTCGGGGCCGGCCGCCACTGCTGGGAGGTG GAGACTGCGGACGCCGCCTCCTGCAGAGACTCTTCTGGGGAGGATGCGGACGACGAGGAG AGCCACTATGCAGTGGGCGCGGCCGGGGAATCAGTGCAACGCAAGGGCTGCGTAAGGCTG TGCCCTGCGGGGGCCGTGTGGGCCGTGGAGGGCCGCGGCGGCCGCCTGTGGGCCCTCACG GCACCCGAACCCACCCTGCTGGGCGGTGTTGAGCCCCCGCCGCGGCGCATTCGCGTGGAC CTGGACTGGGAGCGGGGCCGCGTGGCCTTCTACGACGGCCGCTCACTCGACCTGCTTTAC GCCTTCCAGGCGCCTGGCCCCCTGGGGGAGCGCATCTTCCCGCTGTTCTGCACCTGCGAC CCTCGTGCTCCGCTCCGCATTGTACCAGCGGAAAGCTGA >chr6_cox_hap1_47|geneid_v1.2_predicted_protein_47|353_AA MDAPELGPGLVERLEQLATCPLCGGSFEDPVLLACEHSFCRACLARRWGTPPATGTEASP TACPCCGLPCPRRSLRSNVRLAVEVRISRELREKLAEPGARAGRRRGGRIPTMGCLDLPG EDMRKTWRRFEVPTSKSSNSEDDLPEDYPVVKKMLHRLTADLTLDPGTAHRRLLISADRR SVQLAPPGTPAPPDGPKRFDQLPAVLGAQGFGAGRHCWEVETADAASCRDSSGEDADDEE SHYAVGAAGESVQRKGCVRLCPAGAVWAVEGRGGRLWALTAPEPTLLGGVEPPPRRIRVD LDWERGRVAFYDGRSLDLLYAFQAPGPLGERIFPLFCTCDPRAPLRIVPAES* # Gene 48 (Reverse). 7 exons. 369 aa. Score = 19.34 Terminal 1518413 1518557 0.18 - 1 0 0.00 -3.13 17.66 0.00 AA 321:369 chr6_cox_hap1_48 Internal 1521570 1521648 0.52 - 2 2 1.12 4.47 5.42 0.00 AA 295:321 chr6_cox_hap1_48 Internal 1524460 1524575 -0.43 - 1 1 4.41 -0.92 6.20 0.00 AA 256:295 chr6_cox_hap1_48 Internal 1525428 1525450 1.96 - 0 2 2.64 7.24 2.56 0.00 AA 249:256 chr6_cox_hap1_48 Internal 1526853 1527083 6.52 - 0 0 4.73 4.37 15.16 0.00 AA 172:248 chr6_cox_hap1_48 Internal 1528064 1528159 2.93 - 0 0 4.28 3.91 7.54 0.00 AA 140:171 chr6_cox_hap1_48 First 1528805 1529221 7.66 - 0 0 2.99 1.30 25.21 0.00 AA 1:139 chr6_cox_hap1_48 >chr6_cox_hap1_48|geneid_v1.2_predicted_cDNA_48|1107_NN ATGGCCAGTGGGCAGTTTGTGAACAAACTGCAAGAGGAAGTGATCTGCCCCATCTGCCTG GACATTCTGCAGAAACCTGTCACCATTGACTGTGGGCACAATTTCTGCCTCAAATGCATC ACTCAGATTGGGGAAACATCATGTGGATTTTTCAAATGTCCCCTCTGCAAAACTTCCGTA AGGAAGAACGCAATCAGGTTCAACTCGCTGTTGCGGAATCTGGTGGAGAAAATCCAAGCT CTACAAGCCTCTGAGGTGCAGTCCAAAAGGAAAGAGGCTACATGCCCGAGGCACCAGGAG ATGTTCCATTATTTCTGCGAGGATGATGGGAAGTTCCTCTGTTTTGTGTGTCGTGAATCC AAGGACCACAAATCCCATAATGTCAGCTTGATCGAAGAAGCTGCCCAGAATTATCAGGGG CAGATTCAAGAGCAGATCCAAGTCTTGCAGCAAAAGGAGAAGGAGACAGTACAAGTGAAG GCACAAGGTGTACACAGGGTCGATGTCTTCACGGACCAGGTAGAACATGAGAAGCAAAGG ATCCTCACAGAATTTGAACTCCTGCATCAAGTCCTAGAGGAGGAGAAGAATTTCCTGCTA TCACGGATTTACTGGCTGGGTCATGAGGGAACGGAAGCAGGGAAACACTATGTTGCCTCC ACTGAGCCACAGTTGAACGATCTCAAGAAGCTCATTGATTCCCTGAAGACCAAGCAGAAC ATGCCACCCAGGCAGCTGCTGGAGGATATCAAAGTCGTCTTGTGCAGAAGTGAAGAGTTT CAGTTTCTCAACCCAACCCCTGTTCCTCTGGAACTGGAGAAAAAACTCAGTGAAGCAAAA TCAAGACATGACTCCATCACAGGGAGCCTGAAAAAATTCAAAGACCAACTCCAGGCTGAT AGGAAAAAAGATGAAAACAGATTCTTCAAAAGCATGAATAAAAATGACATGAAGAGCTGT AAGCGGGGCTTCCTGGAGGTGGAGCCCTTGACCGGCTTCGTGGAGCTGCACAGCAGCGGC TCCCAGTGCCAGGCGCTCATCGAGAGCGGTTCCCGCGAGGATCTCCCGGTCTGTCCGAAC AAAGTGGGCGTCCGCGTGGATTACTAG >chr6_cox_hap1_48|geneid_v1.2_predicted_protein_48|369_AA MASGQFVNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSV RKNAIRFNSLLRNLVEKIQALQASEVQSKRKEATCPRHQEMFHYFCEDDGKFLCFVCRES KDHKSHNVSLIEEAAQNYQGQIQEQIQVLQQKEKETVQVKAQGVHRVDVFTDQVEHEKQR ILTEFELLHQVLEEEKNFLLSRIYWLGHEGTEAGKHYVASTEPQLNDLKKLIDSLKTKQN MPPRQLLEDIKVVLCRSEEFQFLNPTPVPLELEKKLSEAKSRHDSITGSLKKFKDQLQAD RKKDENRFFKSMNKNDMKSCKRGFLEVEPLTGFVELHSSGSQCQALIESGSREDLPVCPN KVGVRVDY* # Gene 49 (Forward). 2 exons. 126 aa. Score = 3.23 First 1553455 1553799 2.94 + 0 0 1.45 4.33 11.17 0.00 AA 1:115 chr6_cox_hap1_49 Terminal 1561814 1561846 0.29 + 0 0 6.49 0.00 3.48 0.00 AA 116:126 chr6_cox_hap1_49 >chr6_cox_hap1_49|geneid_v1.2_predicted_cDNA_49|378_NN ATGATCCCTTTGCAGAAGGACAACCAGGAGGAGGGTGTCTGCCCCATCTGCCAGGAGAGC CTGAAGGAGGCCGTGAGCACCAACTGCGGACATCTCTTCTGTCGAGTGTGCCTGACACAG CATGTGGAGAAGGCCTCAGCCTCTGGGGTCTTCTGCTGCCCCCTCTGCCGGAAGCCCTGT TCTGAGGAGGTGCTAGGGACAGGCTATATCTGCCCCAACCACCAGAAGAGGGTGTGCAGG TTCTGTGAGGAGAGCAGACTTCTTCTATGTGTGGAATGCCTGGTGTCCCCTGAACACATG TCTCATCATGAACTGACCATTGAAAATGCCCTCAGCCACTACAAGGTCATCAAAAACCTG AAAGCAAAATTTTTTTAG >chr6_cox_hap1_49|geneid_v1.2_predicted_protein_49|126_AA MIPLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPC SEEVLGTGYICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHELTIENALSHYKVIKNL KAKFF* # Gene 50 (Reverse). 8 exons. 516 aa. Score = 22.69 Terminal 1563331 1563588 -0.34 - 0 0 0.00 4.30 5.21 0.00 AA 431:516 chr6_cox_hap1_50 Internal 1570546 1570907 4.92 - 2 0 3.66 4.79 12.11 0.00 AA 310:430 chr6_cox_hap1_50 Internal 1572148 1572180 0.51 - 2 1 4.37 4.73 1.51 0.00 AA 299:310 chr6_cox_hap1_50 Internal 1573360 1573475 2.43 - 1 1 3.49 3.24 9.85 0.00 AA 260:299 chr6_cox_hap1_50 Internal 1573790 1573812 0.35 - 0 2 4.60 4.98 0.38 0.00 AA 253:260 chr6_cox_hap1_50 Internal 1574818 1575048 4.62 - 0 0 3.66 2.24 15.20 0.00 AA 176:252 chr6_cox_hap1_50 Internal 1575569 1575664 1.39 - 0 0 3.56 5.46 3.82 0.00 AA 144:175 chr6_cox_hap1_50 First 1576849 1577277 8.80 - 0 0 1.38 2.00 29.44 0.00 AA 1:143 chr6_cox_hap1_50 >chr6_cox_hap1_50|geneid_v1.2_predicted_cDNA_50|1548_NN ATGGCCTCTGCTGCCTCTGTGACCAGCCTGGCAGATGAAGTCAACTGCCCCATCTGTCAG GGTACCCTGAGGGAGCCGGTCACTATCGACTGCGGCCACAACTTCTGCCGGGCCTGCCTT ACCCGCTACTGTGAGATACCAGGCCCAGACCTGGAGGAGTCCCCTACTTGCCCACTCTGC AAAGAACCCTTCCGTCCTGGGAGCTTCCGGCCCAACTGGCAGCTGGCTAACGTGGTGGAG AACATTGAGCGCCTCCAGCTGGTGTCCACACTGGGTTTGGGAGAGGAGGATGTCTGCCAA GAGCACGGAGAGAAGATCTACTTCTTCTGTGAGGATGATGAGATGCAGTTGTGCGTGGTG TGCCGGGAGGCTGGGGAGCACGCTACCCACACCATGCGCTTCCTGGAGGATGCAGCGGCT CCCTATAGGGAACAAATCCATAAGTGTCTTAAATGTCTAAGAAAAGAGAGAGAGGAGATT CAAGAAATCCAGTCAAGAGAAAATAAAAGGATGCAAGTCCTCCTGACTCAGGTGTCCACC AAGAGACAACAGGTGATTTCTGAGTTCGCACACCTGAGGAAGTTTCTAGAGGAACAGCAG AGCATCCTCTTAGCACAATTGGAGAGCCAGGATGGGGACATCTTGAGGCAACGGGATGAA TTTGATTTGCTGGTTGCTGGGGAGATCTGCCGGTTTAGTGCTCTTATTGAAGAACTGGAG GAGAAGAATGAGAGGCCAGCAAGGGAGCTCCTGACGGACATCAGAAGCACTCTAATAAGA TGTGAAACCAGAAAGTGCCGGAAACCGGTGGCTGTGTCGCCAGAGCTGGGCCAGAGGATT CGGGACTTTCCCCAGCAGGCCCTCCCGCTGCAGAGGGAGATGAAGATGTTTCTGGAAAAA CTATGCTTTGAGTTGGACTATGAGCCAGCTCACATTTCTCTAGACCCTCAGACTTCCCAC CCCAAGCTCCTCTTGTCCGAGGACCACCAGCGAGCTCAGTTCTCCTACAAATGGCAGAAC TCACCAGACAACCCCCAGCGTTTTGACCGGGCCACCTGTGTTCTGGCCCACACTGGCATC ACAGGGGGGAGACACACGTGGGTGGTGAGTATAGACCTGGCCCATGGGGGCAGCTGCACC GTGGGCGTGGTGAGCGAGGATGTGCAGCGGAAGGGGGAGCTTCGGCTGCGGCCAGAGGAG GGGGTGTGGGCTGTGAGGCTGGCTTGGGGCTTCGTCTCGGCTCTGGGCTCCTTCCCCACA CGGCTGACCCTGAAGGAGCAGCCCCGGCAGATCAATGACCAGGCTTCTGAGCTGTGTTAC TGCCCTGGAGATGTCAAGGATTCTGGCCGCTTCTGCTGGCATGTGCTCCAGCTGGCCCAG CCACTGCTGAGGGAGGGCACCCAGCTGTTCCCTGGTTTGGTGCTGGCTCTCCGGCCCAGC CTCCAGCCTGTGGTTCCCGTGGTCTACCTGAAACTACAGGAAAGGGGCTCCCTAAGACTC AGTGTCAGGTGGCTCCCTCCTGGCCCTTCACAGTCTCTGAATGTCTGA >chr6_cox_hap1_50|geneid_v1.2_predicted_protein_50|516_AA MASAASVTSLADEVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLC KEPFRPGSFRPNWQLANVVENIERLQLVSTLGLGEEDVCQEHGEKIYFFCEDDEMQLCVV CREAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKRMQVLLTQVST KRQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEICRFSALIEELE EKNERPARELLTDIRSTLIRCETRKCRKPVAVSPELGQRIRDFPQQALPLQREMKMFLEK LCFELDYEPAHISLDPQTSHPKLLLSEDHQRAQFSYKWQNSPDNPQRFDRATCVLAHTGI TGGRHTWVVSIDLAHGGSCTVGVVSEDVQRKGELRLRPEEGVWAVRLAWGFVSALGSFPT RLTLKEQPRQINDQASELCYCPGDVKDSGRFCWHVLQLAQPLLREGTQLFPGLVLALRPS LQPVVPVVYLKLQERGSLRLSVRWLPPGPSQSLNV* # Gene 51 (Forward). 2 exons. 193 aa. Score = 13.91 First 1580096 1580476 10.12 + 0 0 2.09 3.31 29.70 0.00 AA 1:127 chr6_cox_hap1_51 Terminal 1583587 1583784 3.79 + 0 0 6.30 0.00 13.89 0.00 AA 128:193 chr6_cox_hap1_51 >chr6_cox_hap1_51|geneid_v1.2_predicted_cDNA_51|579_NN ATGCCCGCAACCCCGTCCCTGAAGGTGGTCCATGAGCTGCCTGCCTGTACCCTCTGTGCG GGGCCGCTGGAGGATGCGGTGACCATTCCCTGTGGACACACCTTCTGCCGGCTCTGCCTC CCCGCGCTCTCCCAGATGGGGGCCCAATCCTCGGGCAAGATCCTGCTCTGCCCGCTCTGC CAAGAGGAGGAGCAGGCAGAGACTCCCATGGCCCCTGTGCCCCTGGGCCCGCTGGGAGAA ACTTACTGCGAGGAGCACGGCGAGAAGATCTACTTCTTCTGCGAGAACGATGCCGAGTTC CTCTGTGTGTTCTGCAGGGAGGGTCCCACGCACCAGGCGCACACCGTGGGGTTCCTGGAC GAGGCCATTCAGCCCTACCGGGATCGTCTCAGGAGTCGACTGGAAGCTCTGAGCACGGAG AGAGATGAGATTGAGGATGTAAAGTGTCAAGAAGACCAGAAGCTTCAAGTGCTGCTGGTA CAGGCCACGTCACTGGCTACCTTTTCCTTTGAAGGTTTTCTTAAGAGACTCTGGGGAAAC CCGTTGGCTGGTATCTGTTTCCTGGCTGAAAAGAACTGA >chr6_cox_hap1_51|geneid_v1.2_predicted_protein_51|193_AA MPATPSLKVVHELPACTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCPLC QEEEQAETPMAPVPLGPLGETYCEEHGEKIYFFCENDAEFLCVFCREGPTHQAHTVGFLD EAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLVQATSLATFSFEGFLKRLWGN PLAGICFLAEKN* # Gene 52 (Forward). 3 exons. 301 aa. Score = 17.50 First 1584687 1585048 5.34 + 0 2 2.05 -0.19 24.43 0.00 AA 1:121 chr6_cox_hap1_52 Internal 1585652 1585674 1.56 + 1 1 7.62 3.13 1.64 0.00 AA 121:129 chr6_cox_hap1_52 Terminal 1588243 1588760 10.60 + 2 0 4.31 0.00 32.53 0.00 AA 129:301 chr6_cox_hap1_52 >chr6_cox_hap1_52|geneid_v1.2_predicted_cDNA_52|903_NN ATGTCTGCCTTTTATCCCTTGAAGACTCAGATCGAAAGCAAGAAGCATCAGGTGGAAACA GCTTTTGAGAGGCTGCAGCAGGAGCTGGAGCAGCAGCGATGTCTCCTGCTGGCCAGGCTG AGGGAGCTGGAGCAGCAGATTTGGAAGGAGAGGGATGAATATATCACAAAGGTCTCTGAG GAAGTCACCCGGCTTGGAGCCCAGGTCAAGGAGCTGGAGGAGAAGTGTCAGCAGCCAGCA AGTGAGCTTCTACAAGTGAGAGACACTTCACCACTTTGTAGGATAAGAGAGGGACTCCAC GGGGAAGGGGGTGGGCACCATGCTTTGGGCTGGAGAGAGGCAGGAAAGGGAAGTGGAGAG AGGATGTCAGAGTCAACCAGAGCAGGGGTCATCACTCTGGACCCTCAGACCGCCAGCCGG AGCCTGGTTCTCTCGGAAGACAGGAAGTCAGTGAGGTACACCCGGCAGAAGAAGAGCCTG CCAGACAGCCCCCTGCGCTTCGACGGCCTCCCGGCGGTTCTGGGCTTCCCGGGCTTCTCC TCCGGGCGCCACCGCTGGCAGGTTGACCTGCAGCTGGGCGACGGCGGCGGCTGCACGGTG GGGGTGGCCGGGGAGGGGGTGAGGAGGAAGGGAGAGATGGGACTCAGCGCCGAGGACGGC GTCTGGGCCGTGATCATCTCGCACCAGCAGTGCTGGGCCAGCACCTCCCCGGGCACCGAC CTGCCGCTGAGCGAGATCCCGCGCGGCGTGAGAGTCGCCCTGGACTACGAGGCGGGGCAG GTGACCCTCCACAACGCCCAGACCCAGGAGCCCATCTTCACCTTCACTGCCTCTTTCTCC GGCAAAGTCTTCCCTTTCTTTGCCGTCTGGAAAAAAGGTTCCTGCCTTACGCTGAAAGGC TGA >chr6_cox_hap1_52|geneid_v1.2_predicted_protein_52|301_AA MSAFYPLKTQIESKKHQVETAFERLQQELEQQRCLLLARLRELEQQIWKERDEYITKVSE EVTRLGAQVKELEEKCQQPASELLQVRDTSPLCRIREGLHGEGGGHHALGWREAGKGSGE RMSESTRAGVITLDPQTASRSLVLSEDRKSVRYTRQKKSLPDSPLRFDGLPAVLGFPGFS SGRHRWQVDLQLGDGGGCTVGVAGEGVRRKGEMGLSAEDGVWAVIISHQQCWASTSPGTD LPLSEIPRGVRVALDYEAGQVTLHNAQTQEPIFTFTASFSGKVFPFFAVWKKGSCLTLKG * # Gene 53 (Reverse). 1 exons. 103 aa. Score = 1.93 Single 1602269 1602577 1.93 - 0 0 0.00 -0.83 18.57 0.00 AA 1:103 chr6_cox_hap1_53 >chr6_cox_hap1_53|geneid_v1.2_predicted_cDNA_53|309_NN ATGGTGGGGGTGGCTAGAGACTCTGTGAAGAGGAAGGGAGACCTCTCCCTGCGGCCAGAG GATGGCGTGTGGGCGCTGCGCCTCTCCTCCTCCGGCATCTGGGCCAACACCAGCCCCGAG GCTGAGCTTTTCCCAGCACTGCGGCCCCGGAGAGTGGGCATCGCCCTGGATTATGAAGGG GGCACCGTGACTTTCACCAACGCAGAGTCACAGGAACTCATCTACACCTTCACTGCCACC TTCACCCGGCGCCTGGTCCCCTTCCTGTGGCTCAAGTGGCCAGGAACACGCCTCCTGCTA AGACCCTGA >chr6_cox_hap1_53|geneid_v1.2_predicted_protein_53|103_AA MVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTSPEAELFPALRPRRVGIALDYEG GTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTRLLLRP* # Gene 54 (Reverse). 8 exons. 430 aa. Score = 37.31 Terminal 1603241 1603393 2.69 - 0 0 0.00 2.70 15.19 0.00 AA 380:430 chr6_cox_hap1_54 Internal 1603775 1603974 -0.15 - 2 0 1.15 0.01 11.76 0.00 AA 313:379 chr6_cox_hap1_54 Internal 1605564 1605596 2.42 - 2 1 4.94 6.08 2.01 0.00 AA 302:313 chr6_cox_hap1_54 Internal 1605815 1605930 1.11 - 1 1 2.73 3.98 5.23 0.00 AA 263:302 chr6_cox_hap1_54 Internal 1606411 1606433 1.38 - 0 2 2.39 7.49 1.14 0.00 AA 256:263 chr6_cox_hap1_54 Internal 1612901 1613131 9.37 - 0 0 3.67 4.39 23.83 0.00 AA 179:255 chr6_cox_hap1_54 Internal 1614814 1614909 3.08 - 0 0 4.00 5.88 5.38 0.00 AA 147:178 chr6_cox_hap1_54 First 1615051 1615488 17.41 - 0 0 2.64 2.92 47.69 0.00 AA 1:146 chr6_cox_hap1_54 >chr6_cox_hap1_54|geneid_v1.2_predicted_cDNA_54|1290_NN ATGGCCACGTCAGCCCCACTACGGAGCCTGGAAGAGGAGGTGACCTGCTCCATCTGTCTT GATTACCTGCGGGACCCTGTGACCATTGACTGTGGCCACGTCTTCTGCCGCAGCTGCACC ACAGACGTCCGCCCCATCTCAGGGAGCCGCCCCGTCTGCCCACTCTGCAAGAAGCCTTTT AAGAAGGAGAACATCCGACCCGTGTGGCAACTGGCCAGCCTGGTGGAGAACATTGAGCGG CTGAAGGTGGACAAGGGCAGGCAGCCGGGAGAGGTGACCCGGGAGCAGCAGGATGCAAAG TTGTGCGAGCGACACCGAGAGAAGCTGCACTACTACTGTGAGGACGACGGGAAGCTGCTG TGCGTGATGTGCCGGGAGTCCCGGGAGCACAGGCCCCACACGGCCGTCCTCATGGAGAAG GCCGCCCAGCCCCACAGGGAAAAAATCCTGAACCACCTGAGTACCCTAAGGAGAGACAGA GACAAAATTCAGGGCTTCCAGGCAAAGGGAGAAGCTGATATCCTGGCCGCGCTGAAGAAG CTCCAGGACCAGAGGCAGTACATTGTGGCTGAGTTTGAGCAGGGTCATCAGTTCCTGAGG GAGCGGGAGGAACACCTGCTGGAACAGCTGGCGAAGCTGGAGCAGGAGCTCACGGAGGGC AGGGAGAAGTTCAAGAGCCGGGGCGTCGGGGAGCTTGCCCGGCTGGCCCTGGTCATCTCC GAACTGGAGGGCAAGGCGCAGCAGCCAGCTGCAGAGCTCATGCAGGACACGAGAGACTTC CTAAACAGGTATCCACGGAAGAAGTTCTGGGTTGGGAAACCCATTGCTCGAGTGGTTAAA AAAAAGACCGGAGAATTCTCAGATAAACTCCTCTCTCTGCAACGAGGCCTGAGGGAATTC CAGGGGAAGCTGCTGAGAGACTTGGAATATAAGACAGTTAGCACAGAGAGTAGCACCTTC CGCCAATTTCTACTTCAAAGATATCGGACTGAATATGACATTAAAGATCAAGCTGCAAAA GGGGATGAAGTTACTCCAAAACAATTTCATGCATTTGTACCCTTTCTGGGAGAGCTTTAT CATAACCTGGAGATCAGAGGAACAAATGGACAGGTTACAAGGGCAGATATTCTTCAGCTG ATCCGGATTACCAAGAAGCATATCAAGAGTTACTTGAAAAAGAGGACTTTTTTTCTGGAT TATGAAGAAAATGGAACAGATTTTTCAGGGACTGGTGATCCACACTTGGATGATATTAAT GATGAGTTGGACCCAGAGATCCAGAGATAG >chr6_cox_hap1_54|geneid_v1.2_predicted_protein_54|430_AA MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPF KKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLL CVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAALKK LQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLALVIS ELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQRGLREF QGKLLRDLEYKTVSTESSTFRQFLLQRYRTEYDIKDQAAKGDEVTPKQFHAFVPFLGELY HNLEIRGTNGQVTRADILQLIRITKKHIKSYLKKRTFFLDYEENGTDFSGTGDPHLDDIN DELDPEIQR* # Gene 55 (Forward). 14 exons. 585 aa. Score = 18.31 First 1654856 1654891 -3.01 + 0 0 1.44 1.06 2.60 0.00 AA 1: 12 chr6_cox_hap1_55 Internal 1658053 1658148 1.32 + 0 0 4.49 2.83 6.18 0.00 AA 13: 44 chr6_cox_hap1_55 Internal 1658453 1658632 0.19 + 0 0 -1.46 2.67 12.52 0.00 AA 45:104 chr6_cox_hap1_55 Internal 1660404 1660426 2.13 + 0 2 6.83 5.66 0.46 0.00 AA 105:112 chr6_cox_hap1_55 Internal 1675908 1676077 -0.47 + 1 1 -0.31 4.10 5.64 0.00 AA 112:169 chr6_cox_hap1_55 Internal 1676195 1676464 13.27 + 2 1 2.72 4.10 35.45 0.00 AA 169:259 chr6_cox_hap1_55 Internal 1676731 1676906 3.83 + 2 0 -1.85 1.36 22.80 0.00 AA 259:317 chr6_cox_hap1_55 Internal 1677595 1677859 -2.44 + 0 1 -0.60 2.45 3.63 0.00 AA 318:406 chr6_cox_hap1_55 Internal 1677967 1678083 1.68 + 2 1 4.39 2.79 5.93 0.00 AA 406:445 chr6_cox_hap1_55 Internal 1678675 1678722 0.57 + 2 1 4.03 3.69 2.36 0.00 AA 445:461 chr6_cox_hap1_55 Internal 1708710 1708769 0.86 + 2 1 6.14 3.65 1.34 0.00 AA 461:481 chr6_cox_hap1_55 Internal 1720394 1720511 -0.22 + 2 2 4.83 -0.14 6.30 0.00 AA 481:520 chr6_cox_hap1_55 Internal 1730639 1730732 1.89 + 1 0 4.83 4.11 5.19 0.00 AA 520:551 chr6_cox_hap1_55 Terminal 1732762 1732863 -1.28 + 0 0 3.27 0.00 5.77 0.00 AA 552:585 chr6_cox_hap1_55 >chr6_cox_hap1_55|geneid_v1.2_predicted_cDNA_55|1755_NN ATGGCCAACCTGATGGAGAACATTTGGAGAATGAAGGGCAAAATTCTAAACCATCGGAAG ATTCTGAAGGGATACAGGGATAGCATTCAGAATTCTCAATCTATGGGAGAAGATGAGATT CAGGCCCTGGTGGGCCATCGGTTTTTGAGAGAAAGGGAACAGTACCTGTTGGAGCAGCTG GTAGGGCTAGAGCAAGAGCTCACCAAAAGGAGGAACAGCCGTGTCATCAAGGGTTCTGAG GAGGTGGTCCAGCTTGGGACCCTGATCACTGAGTTGGAGAAGTCTCGGCAGCCAGCACTT GAACTTTTGAAGGACCCAAGTGACATAATATGCAGAGAAGCCAATCAGCTTCGCCGCGAT CCCGGCACTACGATCCCGGCACTACAGTCCCGGCGCAACCACCCGCACTCAGATTCTCCC CAAACGCCAAGGATGGGGGTCATGGCTCCCCGAACGCTCCTCCTGCTGCTCTTGGGGGCC CTGGCCCTGACCGAGACCTGGGCCGGCTCCCACTCCTTGAGGTATTTCAGCACCGCAGTG TCCCAGCCCGGCCGCGGGGAGCCCCGGTTCATCGCCGTGGGCTACGTGGACGACACAGAG TTCGTGCGGTTCGACAGCGACTCCGTGAGTCCGAGGATGGAGCGGCGGGCGCCGTGGGTG GAGCAGGAGGGGCTGGAGTATTGGGACCAGGAGACACGGAACGCCAAGGGCCACGCGCAG ATTTACCGAGTGAACCTGCGGACCCTGCTCCGCTATTACAACCAGAGCGAGGCCGAGGAA GCATGGCTGCGACGTGGGCCCGACAGGCGCCTCCTCCGCAGGTATGAACAGTTCGCCTAC GATGGCAAGGATTACATCGCCCTGAACGAGGACCTGCACTCCTGGACCGCCGCGAACACA GCGGCTCAGATCTCCCAGCACAAGTGGGAAGCGGACAAATACTCAGAGCAGGCACATGTG ACCCAGCACCCCATCTCTGACCATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCCTCTAC CCTGCGGAGATCACACTGACCTGGCAGCAGGATGGGGAGGACCAGACCCAGGACACGGAG CTTGTGGAGACCAGGCCTGCAGGGGACGGAACCTTCCAGAAGTGGGTGGCTGTAGTGGTG CCTTCCGGAGAGGAGCAGAGATACATGTGCCATGTGCAGCATGAGGGGCTGCCAGAGCCC CTCACCCTGAGATGGGAGCCGTCTTCTCAGCCCACCATCCCCATCGTGGGCATCGTTGCT GGCCTGTTTCTCCTTGGAGCTGTGGTCACTGGAGCTGTGGTTGCTGCTGCGATGTGGAGG AAGAAAAGCTCAGGCAGCAATTGTGCTCAGTACTCTGATGCATCTCATGATACTTGTAAA GAGTTCTCACCACCTCCTCCCAGGCTAAATCCTTCATGTTGCAGGAGACAGAGAATCCCA GGAGCCATGGCTATCAACCTGGAGAGAGGCCAAAAGACACCTAGGCTTTTTGTAAACCAA AGATTGAGGTATCCACATCAGTCAGCAGTGGCTTCTGCAGCAGCAGCCACAGAAAGTGAC TCAGAGACTGATGTCTATATCATGAATGCGCTAAGAAAGGGAGAATCACGAGTGGAATCC AGTATCAGTAGCTGGGAGCAAAAGACACTTGCGAAGCAGCCCAATCTGGCAAAAGTACCG ATCCTTAGATCTGGAGACAAAACTCAACAACGGGCTTCTCTGACTTTTGTCAGACATCTT GCACATCACATGTAG >chr6_cox_hap1_55|geneid_v1.2_predicted_protein_55|585_AA MANLMENIWRMKGKILNHRKILKGYRDSIQNSQSMGEDEIQALVGHRFLREREQYLLEQL VGLEQELTKRRNSRVIKGSEEVVQLGTLITELEKSRQPALELLKDPSDIICREANQLRRD PGTTIPALQSRRNHPHSDSPQTPRMGVMAPRTLLLLLLGALALTETWAGSHSLRYFSTAV SQPGRGEPRFIAVGYVDDTEFVRFDSDSVSPRMERRAPWVEQEGLEYWDQETRNAKGHAQ IYRVNLRTLLRYYNQSEAEEAWLRRGPDRRLLRRYEQFAYDGKDYIALNEDLHSWTAANT AAQISQHKWEADKYSEQAHVTQHPISDHEATLRCWALGLYPAEITLTWQQDGEDQTQDTE LVETRPAGDGTFQKWVAVVVPSGEEQRYMCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVA GLFLLGAVVTGAVVAAAMWRKKSSGSNCAQYSDASHDTCKEFSPPPPRLNPSCCRRQRIP GAMAINLERGQKTPRLFVNQRLRYPHQSAVASAAAATESDSETDVYIMNALRKGESRVES SISSWEQKTLAKQPNLAKVPILRSGDKTQQRASLTFVRHLAHHM* # Gene 56 (Forward). 6 exons. 489 aa. Score = 34.34 First 1745609 1746061 9.44 + 0 0 0.48 1.50 34.50 0.00 AA 1:151 chr6_cox_hap1_56 Internal 1747072 1747167 3.35 + 0 0 4.49 2.67 11.52 0.00 AA 152:183 chr6_cox_hap1_56 Internal 1752041 1752271 7.49 + 0 0 4.19 -0.16 26.54 0.00 AA 184:260 chr6_cox_hap1_56 Internal 1756202 1756224 1.46 + 0 2 6.94 3.28 2.19 0.00 AA 261:268 chr6_cox_hap1_56 Internal 1756799 1756914 2.23 + 1 1 4.76 3.33 7.31 0.00 AA 268:307 chr6_cox_hap1_56 Terminal 1758006 1758553 10.38 + 2 0 2.78 0.00 34.27 0.00 AA 307:489 chr6_cox_hap1_56 >chr6_cox_hap1_56|geneid_v1.2_predicted_cDNA_56|1467_NN ATGGCAGAGACAAGTCTGTTAGAGGCTGGGGCCTCTGCAGCCTCTACAGCTGCGGCTTTG GAGAACTTACAGGTGGAGGCGAGCTGCTCTGTGTGCCTGGAGTATCTGAAGGAACCTGTC ATCATTGAGTGTGGGCACAACTTCTGCAAAGCTTGCATCACCCGCTGGTGGGAGGACCTA GAGAGGGACTTCCCTTGTCCTGTCTGTCGAAAGACATCCCGCTACCGCAGTCTCCGACCT AATCGGCAACTAGGCAGTATGGTGGAAATTGCCAAGCAGCTCCAGGCCGTCAAGCGGAAG ATCCGGGATGAGAGCCTCTGCCCCCAACACCATGAGGCCCTCAGCCTTTTCTGTTATGAG GACCAGGAGGCTGTATGCTTGATATGTGCAATTTCCCACACCCACCGGGCCCACACCGTT GTGCCACTGGACGATGCTACACAGGAGTACAAGGAAAAACTGCAGAAGTGTCTGGAGCCC CTGGAACAGAAGCTGCAGGAGATCACTCGCTGCAAGTCCTCTGAGGAGAAGAAGCCTGGT GAGCTCAAGAGACTAGTGGAAAGTCGCCGACAGCAGATCTTGAGGGAGTTTGAAGAGCTT CATAGGCGGCTGGATGAAGAGCAGCAGGTGTTGCTTTCACGACTGGAAGAAGAGGAACAG GACATTCTGCAGCGACTCCGAGAAAATGCTGCTCACCTTGGGGACAAGCGCCGGGACCTG GCCCACTTGGCTGCCGAGGTGGAGGGCAAGTGCTTACAGTCAGGCTTCGAGATGCTTAAG GATGTCAAAAGTACCCTGGAAAAATGTGAAAAGGTGAAGACCATGGAGGTGACTTCAGTA TCCATAGAGCTGGAAAAGAACTTCAGCAATTTTCCCCGACAGTACTTTGCCCTAAGGAAA ATCCTTAAACAGCTAATTGCGGATGTGACCCTGGACCCTGAGACAGCTCATCCTAACCTA GTCCTGTCAGAGGATCGTAAGAGCGTCAAGTTCGTGGAGACAAGACTCCGGGATCTCCCT GACACACCAAGGCGTTTCACCTTCTACCCTTGCGTCCTGGCTACTGAGGGTTTCACCTCA GGTCGACACTACTGGGAGGTGGAGGTGGGCGACAAGACCCACTGGGCAGTGGGTGTATGC CGGGACTCCGTGAGCCGAAAGGGCGAGTTGACTCCACTCCCTGAGACTGGCTACTGGCGG GTGCGGCTATGGAATGGGGACAAATATGCAGCCACCACCACACCTTTTACCCCTTTGCAC ATCAAGGTGAAACCCAAGCGGGTAGGCATATTCCTAGACTATGAGGCCGGCACACTGTCT TTCTACAATGTCACAGACCGCTCTCATATCTACACCTTCACTGATACTTTTACTGAGAAA CTTTGGCCCCTCTTCTACCCAGGCATCCGGGCTGGACGGAAGAATGCTGCACCACTTACC ATCAGGCCCCCAACAGATTGGGAGTGA >chr6_cox_hap1_56|geneid_v1.2_predicted_protein_56|489_AA MAETSLLEAGASAASTAAALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDL ERDFPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYE DQEAVCLICAISHTHRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKKPG ELKRLVESRRQQILREFEELHRRLDEEQQVLLSRLEEEEQDILQRLRENAAHLGDKRRDL AHLAAEVEGKCLQSGFEMLKDVKSTLEKCEKVKTMEVTSVSIELEKNFSNFPRQYFALRK ILKQLIADVTLDPETAHPNLVLSEDRKSVKFVETRLRDLPDTPRRFTFYPCVLATEGFTS GRHYWEVEVGDKTHWAVGVCRDSVSRKGELTPLPETGYWRVRLWNGDKYAATTTPFTPLH IKVKPKRVGIFLDYEAGTLSFYNVTDRSHIYTFTDTFTEKLWPLFYPGIRAGRKNAAPLT IRPPTDWE* # Gene 57 (Forward). 4 exons. 163 aa. Score = 6.62 First 1761466 1761522 3.74 + 0 0 4.86 4.51 7.80 0.00 AA 1: 19 chr6_cox_hap1_57 Internal 1761592 1761692 2.98 + 0 2 3.58 3.38 9.50 0.00 AA 20: 53 chr6_cox_hap1_57 Internal 1761785 1761926 -0.64 + 1 0 4.44 -0.45 4.91 0.00 AA 53:100 chr6_cox_hap1_57 Terminal 1794802 1794990 0.54 + 0 0 1.35 0.00 13.20 0.00 AA 101:163 chr6_cox_hap1_57 >chr6_cox_hap1_57|geneid_v1.2_predicted_cDNA_57|489_NN ATGGCGGGGCCGGTGAAGGACCGCGAGGCCTTCCAGAGGCTCAACTTCCTGTACCAGGCC GCCCATTGTGTCCTTGCCCAGGACCCCGAGAACCAGGCGCTGGCGAGGTTTTACTGCTAC ACTGAGAGGACCATTGCGAAGCGGCTCGTCTTGCGGCGGGATCCCTCGGTGAAGAGGACT CTCTGTCGAGGCTGCTCTTCCCTCCTCGTCCCGGGCCTCACCTGCACCCAGCGCCAGAGA CGTGAGTGCTCCAACGGAGGTGGAAGACTGCGGAGCATTGGGGGCGCGGAGGGGGGCGGG GTGAAAGAGGATCTGGCTCCCTACATCCCAGGACGTGTAGAACTGTCCATGGTTCTGAAA GACAAACTAGCAGGTCCCACCACCTTTACAAATGGCAATCTTACTGTGGAAAACTGCACT AGTGAAAACTCTACATATGACTTTGTACATGCATCACTTACAAGGATTCAGCAATCCTTG GAAAGATGA >chr6_cox_hap1_57|geneid_v1.2_predicted_protein_57|163_AA MAGPVKDREAFQRLNFLYQAAHCVLAQDPENQALARFYCYTERTIAKRLVLRRDPSVKRT LCRGCSSLLVPGLTCTQRQRRECSNGGGRLRSIGGAEGGGVKEDLAPYIPGRVELSMVLK DKLAGPTTFTNGNLTVENCTSENSTYDFVHASLTRIQQSLER* # Gene 58 (Forward). 2 exons. 151 aa. Score = 2.64 First 1869846 1869908 -0.99 + 0 0 3.40 1.04 3.37 0.00 AA 1: 21 chr6_cox_hap1_58 Terminal 1882751 1883140 3.63 + 0 0 -0.52 0.00 22.36 0.00 AA 22:151 chr6_cox_hap1_58 >chr6_cox_hap1_58|geneid_v1.2_predicted_cDNA_58|453_NN ATGTCCTTCCTGGGTCCCTCCAAAGTAGGGTTGGAGGATCAACTAGTGGATTCCGGCGAG GAGTTTTTGCCCTGCTCCGCGGCGCTCCTCCGGGGCGGGAGCCGCGAGGCCCGGGCGAGC TCGGGCGGGACCGGAGGCTGCGAAGGCTGCCGGGAGCGGGACTCGCAGCTCCTGGATATG CCAGCGTTCCTGGAAGACTCCTGGGTCCTGACGAAAGACAAGTTGATGAGTGAGTTGGTC GCCATTAAAGTGAGGCTCCCGGCCCGGAGCAGCGCAGAGACCAGGACGCGCAGCCTCGCC TGCAGCACTCGGCCCTACCTCTACCCCGCCGCTACCTCTACCCCGCCGCGGCGCCGACAG CGAGGGCCCCGCCTCCCCCAGCTGGCTCCAGAGCCAAGCCACCCACAGCAGGAAAGCCAC GAAGAAAACAGTTCAACTCAGACCAAAAGATAA >chr6_cox_hap1_58|geneid_v1.2_predicted_protein_58|151_AA MSFLGPSKVGLEDQLVDSGEEFLPCSAALLRGGSREARASSGGTGGCEGCRERDSQLLDM PAFLEDSWVLTKDKLMSELVAIKVRLPARSSAETRTRSLACSTRPYLYPAATSTPPRRRQ RGPRLPQLAPEPSHPQQESHEENSSTQTKR* # Gene 59 (Forward). 1 exons. 230 aa. Score = 14.46 Single 1885893 1886582 14.46 + 0 0 -0.23 0.00 50.35 0.00 AA 1:230 chr6_cox_hap1_59 >chr6_cox_hap1_59|geneid_v1.2_predicted_cDNA_59|690_NN ATGGGATTTCCATCTAATATTGTGGCTTCAGCAGCAGAAAACATGATCAAGCTTTACAGC CTTTTTCTGAAATACGATGCAACCATGATAGAAATAAATTCAATGGTGGAAGATTCAGAT GGAGCTGCATTGTGTAAGGATGCAAAGATCAATTTTGACTCTAATTCAGCCTATCGCCAA AAGAAAATGTTTGATCTACAGGACTGGACCCAGGAAGATGAAAGGAACAAAGATGCTGCT AAGGCAGATCTCAACTACACTGGCCTCGATGGAAGTATAGGCTGCCTAGTAAATGGTGCT GGTTTGGCTATGGCCACAATGGATATAATAAAACTTCATGGAGAGACTCCAGCTAATTTC CTTGTTGGTGGTGGTGCTACAGTCCATCAAGTAACAGAAGCATTTAAGCCTATCACTTCA GATAAAAAGGTACTGGCTATTCTGGTCAACATTTGTGGAGGAATCATGCACTGTGATATT ACAGCAAAGGGTATAGTCATGGCAGTAAAAAGTTTGGAAATTAAAATACCTGTTGTGGTA CAGTTACAAGGTACACAAGTTGATGATGTTAAGGCACTAAAAGCAGACAGTGGACTTAAA ATACTTGCTTGTGATGATTTGGTGGAAGCTGCTAGAGTGCTTGTAAAGCTCTCTGAAATA GTGAAGCAAAGCAAGCGCATGTGGATGTGA >chr6_cox_hap1_59|geneid_v1.2_predicted_protein_59|230_AA MGFPSNIVASAAENMIKLYSLFLKYDATMIEINSMVEDSDGAALCKDAKINFDSNSAYRQ KKMFDLQDWTQEDERNKDAAKADLNYTGLDGSIGCLVNGAGLAMATMDIIKLHGETPANF LVGGGATVHQVTEAFKPITSDKKVLAILVNICGGIMHCDITAKGIVMAVKSLEIKIPVVV QLQGTQVDDVKALKADSGLKILACDDLVEAARVLVKLSEIVKQSKRMWM* # Gene 60 (Forward). 2 exons. 184 aa. Score = 9.06 First 1902289 1902612 5.66 + 0 0 5.10 1.09 17.35 0.00 AA 1:108 chr6_cox_hap1_60 Terminal 1902712 1902939 3.40 + 0 0 -0.02 0.00 21.04 0.00 AA 109:184 chr6_cox_hap1_60 >chr6_cox_hap1_60|geneid_v1.2_predicted_cDNA_60|552_NN ATGGCTGCGCAGGGACAGCCCCAGGTCCAGTTCAAACTTGTATTGGTTGGTGATGGTGGT ACTGGAAAAACGACTTTCGTGAAACATCATTTGACTGGTGAATTTGAGAAGAAGTATGTA GCCACCTTGGGTGTTGAGGTTCATCCCCTAGTGTTCCATACCAACAGAGGACCTGTTAAG TTCAATGTATGGGACACAGCCGGCCTGGAGAAATTCAGTGGACTGAGAGATGGCTATTAT ATCCAAGCCCAGAGTACCATCATAGTGTTTGATGTAACATCGAGAGTTACTTACAAGAAT GTGCCTAACTGGCATAGAGATCTGAAGAATCTTCAGTACTACGACATTTCTGCCAAAAGT AACTATAACTTTGAAAAGCCCTTCCTCTGGCTTGCTAGGAAGCTCATTGGAGACCCTAAC TTGGAATTTGTTGCCATGCCTGCTCTCGCCCCACCAGAAGTTGTCATGGACCCAGCTTTG GCAGCACAGTATGAGCACGACTTAGAGGTTGCTCAGACAACTGCTCTCCCGGACGAGGAT GATGACCTGTGA >chr6_cox_hap1_60|geneid_v1.2_predicted_protein_60|184_AA MAAQGQPQVQFKLVLVGDGGTGKTTFVKHHLTGEFEKKYVATLGVEVHPLVFHTNRGPVK FNVWDTAGLEKFSGLRDGYYIQAQSTIIVFDVTSRVTYKNVPNWHRDLKNLQYYDISAKS NYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEVVMDPALAAQYEHDLEVAQTTALPDED DDL* # Gene 61 (Forward). 6 exons. 340 aa. Score = 14.00 First 1905880 1905943 -2.99 + 0 1 0.10 3.65 -0.60 0.00 AA 1: 22 chr6_cox_hap1_61 Internal 1906074 1906343 12.85 + 2 1 2.89 4.10 34.13 0.00 AA 22:112 chr6_cox_hap1_61 Internal 1906576 1906863 4.77 + 2 1 -6.24 3.49 28.55 0.00 AA 112:208 chr6_cox_hap1_61 Internal 1907485 1907760 0.48 + 2 1 3.84 0.81 6.73 0.00 AA 208:300 chr6_cox_hap1_61 Internal 1907885 1908001 0.87 + 2 1 4.50 1.46 5.73 0.00 AA 300:339 chr6_cox_hap1_61 Terminal 1916716 1916720 -1.98 + 2 0 5.95 0.00 0.00 0.00 AA 339:340 chr6_cox_hap1_61 >chr6_cox_hap1_61|geneid_v1.2_predicted_cDNA_61|1020_NN ATGGTAGATGGAACCCTCCTTTTACTCCTCTCGGAGGCCCTGGCCCTTACCCAGACCTGG GCGGGCTCCCACTCCTTGAAGTATTTCCACACTTCCGTGTCCCGGCCCGGCCGCGGGGAG CCCCGCTTCATCTCTGTGGGCTACGTGGACGACACCCAGTTCGTGCGCTTCGACAACGAC GCCGCGAGTCCGAGGATGGTGCCGCGGGCGCCGTGGATGGAGCAGGAGGGGTCAGAGTAT TGGGACCGGGAGACACGGAGCGCCAGGGACACCGCACAGATTTTCCGAGTGAACCTGCGG ACGCTGCGCGGCTACTACAATCAGAGCGAGGCCGGGGCGGGGCCAGGGTCTCACACCCTG CAGTGGATGCATGGCTGCGAGCTGGGGCCCGACAGGCGCTTCCTCCGCGGGTATGAACAG TTCGCCTACGACGGCAAGGATTATCTCACCCTGAATGAGGACCTGCGCTCCTGGACCGCG GTGGACACGGCGGCTCAGATCTCCGAGCAAAAGTCAAATGATGCCTCTGAGGCGGAGCAC CAGAGAGCCTACCTGGAAGACACATGCGTGGAGTGGCTCCACAAATACCTGGAGAAGGGG AAGGAGACGCTGCTTCACCTGGAGCCCCCAAAGACACACGTGACTCACCACCCCATCTCT GACCATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACACTG ACCTGGCAGCAGGATGGGGAGGGCCATACCCAGGACACGGAGCTCGTGGAGACCAGGCCT GCAGGGGATGGAACCTTCCAGAAGTGGGCAGCTGTGGTGGTGCCTTCTGGAGAGGAGCAG AGATACACGTGCCATGTGCAGCATGAGGGGCTACCCGAGCCCGTCACCCTGAGATGGAAG CCGGCTTCCCAGCCCACCATCCCCATCGTGGGCATCATTGCTGGCCTGGTTCTCCTTGGA TCTGTGGTCTCTGGAGCTGTGGTTGCTGCTGTGATATGGAGGAAGAAGAGCTCAGTGTGA >chr6_cox_hap1_61|geneid_v1.2_predicted_protein_61|340_AA MVDGTLLLLLSEALALTQTWAGSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDND AASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGAGPGSHTL QWMHGCELGPDRRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEH QRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATLRCWALGFYPAEITL TWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWK PASQPTIPIVGIIAGLVLLGSVVSGAVVAAVIWRKKSSV* # Gene 62 (Reverse). 11 exons. 503 aa. Score = 22.78 Terminal 1946045 1946190 -1.55 - 2 0 0.00 3.71 4.42 0.00 AA 455:503 chr6_cox_hap1_62 Internal 1963028 1963168 2.31 - 2 1 1.41 5.22 8.35 0.00 AA 408:455 chr6_cox_hap1_62 Internal 1963444 1963606 3.97 - 0 1 4.42 2.67 11.79 0.00 AA 354:408 chr6_cox_hap1_62 Internal 1963807 1963862 -0.28 - 2 0 1.97 5.03 1.29 0.00 AA 335:353 chr6_cox_hap1_62 Internal 1968800 1968994 4.17 - 2 1 3.48 1.81 15.00 0.00 AA 270:335 chr6_cox_hap1_62 Internal 1969683 1969890 1.65 - 0 1 3.39 3.13 6.85 0.00 AA 201:270 chr6_cox_hap1_62 Internal 1970908 1970979 0.31 - 0 0 1.66 4.47 4.08 0.00 AA 177:200 chr6_cox_hap1_62 Internal 1971097 1971248 0.93 - 2 0 1.49 1.72 10.01 0.00 AA 126:176 chr6_cox_hap1_62 Internal 1971388 1971524 3.27 - 1 1 4.94 4.13 7.06 0.00 AA 80:126 chr6_cox_hap1_62 Internal 1971888 1972053 4.26 - 2 2 3.92 3.49 12.05 0.00 AA 25: 80 chr6_cox_hap1_62 First 1972464 1972536 3.73 - 0 1 2.87 3.56 12.19 0.00 AA 1: 25 chr6_cox_hap1_62 >chr6_cox_hap1_62|geneid_v1.2_predicted_cDNA_62|1509_NN ATGCCGAGGAAGAAGCCATTCAGCGTGAAGCAGAAGAAGAAGCAGTTGCAGGACAAACGG GAGCGGAAGAGAGGGCTTCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGGAGC CGGGAGCGGCGAGAGGAACAGACCGACACCTCGGACGGGGAGTCTGTGACCCATCATATC CGCAGGCTTAACCAGCAGCCTTCTCAGGGGCTGGGTCCACGAGGCTACGACCCAAATCGA TACCGACTGCATTTTGAGAGAGACAGCAGGGAGGAGGTAGAGAGGAGAAAGAGAGCAGCC CGGGAGCAAGTTCTACAGCCGGTCAGTGCTGAGTTGTTGGAGCTGGACATCCGGGAGGTG TATCAGCCTGGCTCAGTTCTGGACTTTCCTCGACGTCCTCCTTGGAGCTATGAGATGTCC AAGGAGCAACTAATGAGCCAAGAGGAACGGAGCTTCCAAGACTATCTTGGGAAGATTCAT GGGGCTTACTCCTCTGAGAAACTCAGCTACTTTGAGCACAATCTGGAGACATGGAGGCAG CTGTGGCGGGTGTTAGAGATGTCTGACATCGTCCTGCTTATCACTGATATCCGACATCCA GTTGTGAATTTCCCGCCAGCACTTTATGAGTATGTGACTGGAGAACTTGGACTGGCCCTG GTGCTGGTTTTGAACAAGGTGGATCTGGCCCCGCCAGCTCTTGTGGTTGCCTGGAAGCAT TATTTCCATCAACACTATCCCCAGCTCCACGTCGTCCTTTTCACCTCTTTTCCTCGGGAC CCCCGCACCCCACAGGATCCTAGTAGTGTGGACTTGAGCAGCTGGCGGGAGAAGATTGCT CGGGATGTGGCTGGGGCCACCTGGGGTAATGGCTCTGGGGAGGAGGAGGAAGAGGAGGAT GGCCCAGCAGTCCTGGTGGAGCAGCAGACTGATTCAGCAATGGAGCCAACTGGCCCAACC CAAGAGCGCTACAAGGATGGGGTGGTGACCATCGGCTGTGTGGGTTTCCCTAATGTGGGA AAGTCCTCGCTGATCAATGGGCTGGTGGGGCGGAAAGTCGTTCTGGCGGGGATCTACCCT ATCGCCCAGATCCAGGAGCCCTACACTGCTGTGGGCTACCTGGCCTCCCGAATTCCCGTG CAGGCCCTGCTCCACCTGCGCCACCCAGAGGCTGAGGACCCCTCAGCGGAACACCCCTGG TGTGCCTGGGACATCTGTGAAGCCTGGGCAGAGAAACGTGGTTACAAGACAGCCAAGGCG GCTCGGAATGATGTGTACAGAGCAGCCAACAGTCTCTTGCGGCTGGCAGTGGACGGCCGC CTCAGCCTGTGTTTTCATCCCCCAGGCTACAGTGAACAGAAAGCACATCCTCCAACAGAA GCCACAGACAACAGAAGAGAGCAGCTTCCCTGTGTGTCCCATACCCACCTCTCCACTTCT GCCACTGGGCATGGACTCCTTTTGATGAACAAGTTCCTCTCACCACGAGCTCACTCTCTT CACACCTAG >chr6_cox_hap1_62|geneid_v1.2_predicted_protein_62|503_AA MPRKKPFSVKQKKKQLQDKRERKRGLQDGLRSSSNSRSGSRERREEQTDTSDGESVTHHI RRLNQQPSQGLGPRGYDPNRYRLHFERDSREEVERRKRAAREQVLQPVSAELLELDIREV YQPGSVLDFPRRPPWSYEMSKEQLMSQEERSFQDYLGKIHGAYSSEKLSYFEHNLETWRQ LWRVLEMSDIVLLITDIRHPVVNFPPALYEYVTGELGLALVLVLNKVDLAPPALVVAWKH YFHQHYPQLHVVLFTSFPRDPRTPQDPSSVDLSSWREKIARDVAGATWGNGSGEEEEEED GPAVLVEQQTDSAMEPTGPTQERYKDGVVTIGCVGFPNVGKSSLINGLVGRKVVLAGIYP IAQIQEPYTAVGYLASRIPVQALLHLRHPEAEDPSAEHPWCAWDICEAWAEKRGYKTAKA ARNDVYRAANSLLRLAVDGRLSLCFHPPGYSEQKAHPPTEATDNRREQLPCVSHTHLSTS ATGHGLLLMNKFLSPRAHSLHT* # Gene 63 (Forward). 3 exons. 92 aa. Score = 3.50 First 1973678 1973783 2.27 + 0 1 2.72 3.92 8.22 0.00 AA 1: 36 chr6_cox_hap1_63 Internal 1974483 1974545 0.48 + 2 1 4.08 3.65 2.11 0.00 AA 36: 57 chr6_cox_hap1_63 Terminal 1978722 1978828 0.75 + 2 0 3.23 0.00 9.54 0.00 AA 57: 92 chr6_cox_hap1_63 >chr6_cox_hap1_63|geneid_v1.2_predicted_cDNA_63|276_NN ATGCCGAAACGAAAGAAGCAGAATCATCACCAGCCACCGACACAGCAGCAGCCCCCGCTG CCCGAGCGGGAAGAGACTGGAGATGAGGAGGATGGGAGTCCCATCGGACCACCCAGCCTT CTGGGCCCTCCCCCCATGGCCAATGGAAAACCTGGCGACCCTAAGTCAGACAAATCCGAC CGCCCTGTCTGCCGACATTTTGCCAAAAAGGGCCACTGTCGATATGAGGACCTCTGTGCC TTCTACCACCCAGGCGTCAATGGACCTCCTCTGTGA >chr6_cox_hap1_63|geneid_v1.2_predicted_protein_63|92_AA MPKRKKQNHHQPPTQQQPPLPEREETGDEEDGSPIGPPSLLGPPPMANGKPGDPKSDKSD RPVCRHFAKKGHCRYEDLCAFYHPGVNGPPL* # Gene 64 (Forward). 23 exons. 844 aa. Score = 63.30 First 1987682 1987895 7.09 + 0 1 5.67 3.99 15.73 0.00 AA 1: 72 chr6_cox_hap1_64 Internal 1993745 1993791 1.06 + 2 0 2.46 3.56 6.12 0.00 AA 72: 87 chr6_cox_hap1_64 Internal 1994409 1994538 4.68 + 0 1 3.15 2.84 15.23 0.00 AA 88:131 chr6_cox_hap1_64 Internal 1994684 1994721 -0.27 + 2 0 3.45 4.33 0.17 0.00 AA 131:143 chr6_cox_hap1_64 Internal 1994806 1994913 2.25 + 0 0 4.25 1.31 9.78 0.00 AA 144:179 chr6_cox_hap1_64 Internal 1996268 1996342 2.24 + 0 0 4.54 3.71 7.10 0.00 AA 180:204 chr6_cox_hap1_64 Internal 1996742 1996855 2.63 + 0 0 2.81 1.80 13.53 0.00 AA 205:242 chr6_cox_hap1_64 Internal 1999403 1999525 4.66 + 0 0 3.14 4.19 13.16 0.00 AA 243:283 chr6_cox_hap1_64 Internal 1999945 2000045 2.64 + 0 2 1.29 3.00 12.66 0.00 AA 284:317 chr6_cox_hap1_64 Internal 2000142 2000227 -0.21 + 1 1 0.97 2.00 7.52 0.00 AA 317:346 chr6_cox_hap1_64 Internal 2000529 2000728 3.15 + 2 0 3.71 -0.87 16.12 0.00 AA 346:412 chr6_cox_hap1_64 Internal 2000755 2000903 3.53 + 0 2 6.46 1.39 9.55 0.00 AA 413:462 chr6_cox_hap1_64 Internal 2001597 2001680 1.55 + 1 2 2.81 -0.13 12.34 0.00 AA 462:490 chr6_cox_hap1_64 Internal 2001895 2002019 2.19 + 1 1 1.20 2.88 11.85 0.00 AA 490:532 chr6_cox_hap1_64 Internal 2002216 2002328 5.05 + 2 0 3.11 3.58 15.08 0.00 AA 532:569 chr6_cox_hap1_64 Internal 2002471 2002642 5.52 + 0 1 6.70 3.49 11.00 0.00 AA 570:627 chr6_cox_hap1_64 Internal 2002811 2002885 1.92 + 2 1 4.83 0.83 8.80 0.00 AA 627:652 chr6_cox_hap1_64 Internal 2002978 2003048 0.28 + 2 0 4.08 3.67 1.56 0.00 AA 652:675 chr6_cox_hap1_64 Internal 2006018 2006050 1.28 + 0 0 6.11 3.44 1.37 0.00 AA 676:686 chr6_cox_hap1_64 Internal 2006136 2006304 6.08 + 0 1 3.68 0.03 22.15 0.00 AA 687:743 chr6_cox_hap1_64 Internal 2006479 2006543 1.33 + 2 0 4.08 3.89 3.86 0.00 AA 743:764 chr6_cox_hap1_64 Internal 2006636 2006708 1.19 + 0 1 1.07 3.67 8.37 0.00 AA 765:789 chr6_cox_hap1_64 Terminal 2006865 2007031 3.47 + 2 0 3.06 0.00 16.59 0.00 AA 789:844 chr6_cox_hap1_64 >chr6_cox_hap1_64|geneid_v1.2_predicted_cDNA_64|2532_NN ATGACGGCGAAGCTCGCACGTGCGCAGCCCGGGGGCGGGGTTGGCCGCGCCAGCTTGGAG AGCCAGCCCCATCGGGGTTCCCCGCCGCCGGAAGCGGAAATAGCACCGGGCGCCGCCACA GTAGCTGTAACTGCCACCGCGATGCCGAAGGCGCCCAAGCAGCAGCCGCCGGAGCCCGAG TGGATCGGGGACGGAGAGAGCACGAGCCCATCAGACAAAGTGGTGAAGAAAGGGAAGAAG GACAAGAAGATCAAAAAAACGCAGCAAAAAAAAAAGCGAGATACCCGAAAAGGCAGGCGG AAGAAGGATGTGGATGATGATGGAGAAGAGAAAGAGCTCATGGAGCGTCTTAAGAAGCTC TCAGTGCCAACCAGTGATGAGGAGGATGAAGTACCCGCCCCAAAACCCCGCGGAGGGAAG AAAACCAAGGGTGGTAATGTTTTTGCAGCCCTGATTCAGGATCAGAGTGAGGAAGAGGAG GAGGAAGAAAAACATCCTCCTAAGCCTGCCAAGCCGGAGAAGAATCGGATCAATAAGGCC GTATCTGAGGAACAGCAGCCTGCACTCAAGGGCAAAAAGGGAAAGGAAGAGAAGTCAAAA GGGAAGGCTAAGCCTCAAAATAAATTCGCTGCTCTGGACAATGAAGAGGAGGATAAAGAA GAAGAAATTATAAAGGAAAAGGAGCCTCCCAAACAAGGGAAGGAGAAGGCCAAGAAGGCA GAGCAGATGGAGTATGAGCGCCAAGTGGCTTCATTAAAAGCAGCCAATGCAGCTGAAAAT GACTTCTCCGTGTCCCAGGCGGAGATGTCCTCCCGCCAAGCCATGTTAGAAAATGCATCT GACATCAAGCTGGAGAAGTTCAGCATCTCCGCTCATGGCAAGGAGCTGTTCGTCAATGCA GACCTGTACATTGTAGCCGGCCGCCGCTACGGGCTGGTAGGACCCAATGGCAAGGGCAAG ACCACACTCCTCAAGCACATTGCCAACCGAGCCCTGAGCATCCCTCCCAACATTGATGTG TTGCTGTGTGAGCAGGAGGTGGTAGCAGATGAGACACCAGCAGTCCAGGCTGTTCTTCGA GCTGACACCAAGCGATTGAAGCTGCTGGAAGAGGAGCGGCGGCTTCAGGGACAGCTGGAA CAAGGGGATGACACAGCTGCTGAGAGGCTAGAGAAGGTAGAGGAGATGGCGCAGGGGACA CGGGCAAAGACTTGGGGGTTCCTGGGACCCTCAGACGTGTATGAGGAATTGCGGGCCACT GGGGCGGCAGCTGCAGAGGCCAAAGCACGGCGGATCCTGGCTGGCCTGGGCTTTGACCCT GAAATGCAGAATCGACCCACACAGAAGTTCTCAGGGGGCTGGCGCATGCGTGTCTCCCTG GCCAGGGCACTGTTCATGGAGCCCACACTGCTGATGCTGGATGAGCCCACCAACCACCTG GACCTCAACGCTGTCATCTGGCTTAATAACTACCTCCAGGGCTGGCGGAAGACCTTGCTG ATCGTCTCCCATGACCAGGGCTTCTTGGATGATGTCTGCACTGATATCATCCACCTCGAT GCCCAGCGGCTCCACTACTATAGGGGCAATTACATGACCTTCAAAAAGATGTACCAGCAG AAGCAGAAAGAACTGCTGAAACAGTATGAGAAGCAAGAGAAAAAGCTGAAGGAGCTGAAG GCAGGCGGGAAGTCCACCAAGCAGGCGGAAAAACAAACGAAGGAAGCCCTGACTCGGAAG CAGCAGAAATGCCGACGGAAAAACCAAGATGAGGAATCCCAGGAGGCCCCTGAGCTCCTG AAGCGCCCTAAGGAGTACACTGTGCGCTTCACTTTTCCAGACCCCCCACCACTCAGCCCT CCAGTGCTGGGTCTGCATGGTGTGACATTCGGCTACCAGGGACAGAAACCACTCTTTAAG AACTTGGATTTTGGCATCGACATGGATTCAAGGATTTGCATTGTGGGCCCTAATGGTGTG GGGAAGAGTACGCTACTCCTGCTGCTGACTGGCAAGCTGACACCGACCCATGGGGAAATG AGAAAGAACCACCGGCTGAAAATTGGCTTCTTCAACCAGCAGTATGCAGAGCAGCTGCGC ATGGAGGAGACGCCCACTGAGTACCTGCAGCGGGGCTTCAACCTGCCCTACCAGGATGCC CGCAAGTGCCTGGGCCGCTTCGGCCTGGAGAGTCACGCCCACACCATCCAGATCTGCAAA CTCTCTGGTGGTCAGAAGGCGCGAGTTGTGTTTGCTGAGCTGGCCTGTCGGGAACCTGAT GTCCTCATCTTGGACGAGCCAACCAATAACCTGGACATAGAGTCTATTGATGCTCTAGGG GAGGCCATCAATGAATACAAGGGTGCTGTGATCGTTGTCAGCCATGATGCCCGACTCATC ACAGAAACCAATTGCCAGCTGTGGGTGGTGGAGGAGCAGAGTGTTAGCCAAATCGATGGT GACTTTGAAGACTACAAGCGGGAGGTGTTGGAGGCCCTGGGTGAAGTCATGGTCAGCCGG CCCCGAGAGTGA >chr6_cox_hap1_64|geneid_v1.2_predicted_protein_64|844_AA MTAKLARAQPGGGVGRASLESQPHRGSPPPEAEIAPGAATVAVTATAMPKAPKQQPPEPE WIGDGESTSPSDKVVKKGKKDKKIKKTQQKKKRDTRKGRRKKDVDDDGEEKELMERLKKL SVPTSDEEDEVPAPKPRGGKKTKGGNVFAALIQDQSEEEEEEEKHPPKPAKPEKNRINKA VSEEQQPALKGKKGKEEKSKGKAKPQNKFAALDNEEEDKEEEIIKEKEPPKQGKEKAKKA EQMEYERQVASLKAANAAENDFSVSQAEMSSRQAMLENASDIKLEKFSISAHGKELFVNA DLYIVAGRRYGLVGPNGKGKTTLLKHIANRALSIPPNIDVLLCEQEVVADETPAVQAVLR ADTKRLKLLEEERRLQGQLEQGDDTAAERLEKVEEMAQGTRAKTWGFLGPSDVYEELRAT GAAAAEAKARRILAGLGFDPEMQNRPTQKFSGGWRMRVSLARALFMEPTLLMLDEPTNHL DLNAVIWLNNYLQGWRKTLLIVSHDQGFLDDVCTDIIHLDAQRLHYYRGNYMTFKKMYQQ KQKELLKQYEKQEKKLKELKAGGKSTKQAEKQTKEALTRKQQKCRRKNQDEESQEAPELL KRPKEYTVRFTFPDPPPLSPPVLGLHGVTFGYQGQKPLFKNLDFGIDMDSRICIVGPNGV GKSTLLLLLTGKLTPTHGEMRKNHRLKIGFFNQQYAEQLRMEETPTEYLQRGFNLPYQDA RKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACREPDVLILDEPTNNLDIESIDALG EAINEYKGAVIVVSHDARLITETNCQLWVVEEQSVSQIDGDFEDYKREVLEALGEVMVSR PRE* # Gene 65 (Reverse). 2 exons. 192 aa. Score = 18.21 Terminal 2017886 2017954 -1.10 - 0 0 0.00 -1.81 12.46 0.00 AA 170:192 chr6_cox_hap1_65 First 2018273 2018779 19.31 - 0 0 3.87 2.41 51.34 0.00 AA 1:169 chr6_cox_hap1_65 >chr6_cox_hap1_65|geneid_v1.2_predicted_cDNA_65|576_NN ATGGACGAGGGGGCCCTGGTGGGGGCATGGTTGGAGGTGGTGGGCATCGTCCTCACGAAG GCCCTGGTGGGGGCATGGGCAACAGCAGTGGACATCGTCCCCACGAAGGCCCTGGCGGTG GCATGGGAAGTGGGCATCGCCCCCATGAAGGCCCTGGTGGTAGCATGGGTGGGGGTGGAG GACATCGTCCCCACGAAGGCCCTGGCGGTGGCATCAGTGGTGGCAGTGGCCATCGTCCCC ATGAAGGCCCTGGCGGAGGAATGGGTGCCGGTGGTGGACATCGCCCCCACGAAGGCCCTG GCGGAAGCATGGGTGGAAGTGGTGGACATCGTCCCCATGAAGGCCCTGGACACGGGGGGC CCCATGGCCACCGGCCTCATGATGTCCCTGGTCACCGAGGCCATGACCATCGAGGGCCGC CACCTCATGAGCACCGTGGCCATGATGGTCCTGGCCACGGGGGAGGGGGCCACCGAGGGC ACGATGGAGGCCACAGCCATGGAGGAGGGCAACTGCCGCTATGAGAACAACTGTGCCTTC TACCACCCGGGTGTCAATGGGCCCCCCCTGCCCTAG >chr6_cox_hap1_65|geneid_v1.2_predicted_protein_65|192_AA MDEGALVGAWLEVVGIVLTKALVGAWATAVDIVPTKALAVAWEVGIAPMKALVVAWVGVE DIVPTKALAVASVVAVAIVPMKALAEEWVPVVDIAPTKALAEAWVEVVDIVPMKALDTGG PMATGLMMSLVTEAMTIEGRHLMSTVAMMVLATGEGATEGTMEATAMEEGNCRYENNCAF YHPGVNGPPLP* # Gene 66 (Reverse). 14 exons. 566 aa. Score = 24.90 Terminal 2019279 2019296 -1.83 - 0 0 0.00 4.52 1.14 0.00 AA 561:566 chr6_cox_hap1_66 Internal 2019809 2020003 1.99 - 0 0 2.47 7.10 3.13 0.00 AA 496:560 chr6_cox_hap1_66 Internal 2020117 2020180 1.41 - 1 0 5.44 2.70 3.82 0.00 AA 474:495 chr6_cox_hap1_66 Internal 2020345 2020591 4.87 - 2 2 4.07 2.90 14.23 0.00 AA 392:474 chr6_cox_hap1_66 Internal 2020690 2020848 2.30 - 2 1 4.60 3.01 6.84 0.00 AA 339:392 chr6_cox_hap1_66 Internal 2020925 2021072 0.43 - 0 1 1.46 3.01 6.86 0.00 AA 290:339 chr6_cox_hap1_66 Internal 2021331 2021431 1.06 - 2 0 2.79 4.69 3.94 0.00 AA 256:289 chr6_cox_hap1_66 Internal 2022260 2022372 1.82 - 1 1 1.53 1.45 12.59 0.00 AA 218:256 chr6_cox_hap1_66 Internal 2022475 2022580 3.59 - 2 2 2.96 5.05 9.45 0.00 AA 183:218 chr6_cox_hap1_66 Internal 2022805 2022978 6.10 - 2 1 2.70 3.45 19.89 0.00 AA 125:183 chr6_cox_hap1_66 Internal 2023116 2023193 1.60 - 2 1 2.65 4.60 6.99 0.00 AA 99:125 chr6_cox_hap1_66 Internal 2024177 2024228 0.48 - 0 1 2.61 3.19 6.36 0.00 AA 82: 99 chr6_cox_hap1_66 Internal 2025116 2025251 0.04 - 1 0 1.53 3.46 6.47 0.00 AA 36: 81 chr6_cox_hap1_66 First 2026175 2026281 1.03 - 0 2 4.51 2.07 6.60 0.00 AA 1: 36 chr6_cox_hap1_66 >chr6_cox_hap1_66|geneid_v1.2_predicted_cDNA_66|1698_NN ATGGGTTCGGGTCCCATAGACCCCAAAGAACTTCTCAAGGGCCTGGACAGCTTCCTTAAC CGAGATGGGGAAGTCAAAAGTGTGGATGGGATTTCCAAGATCTTCAGATTTATTGACGTT GGCGGCTACAAACTTCTTAACAATTGGCTGACGTATTCAAAGACAACCAACAACATTCCC CTCCTCCAGCAAATTCTACTGACCCTGCAGCATCTACCGCTCACTGTAGACCATCTCAAG CAGAACAACACAGCTAAACTGGTGAAGCAGCTGAGCAAGTCAAGTGAGGATGAAGAGCTC CGGAAATTGGCCTCAGTCCTTGTCAGCGACTGGATGGCTGTCATCCGCTCTCAGAGCAGT ACCCAGCCTGCTGAGAAAGATAAGAAGAAACGTAAAGATGAAGGAAAAAGTCGAACTACC CTTCCTGAGCGACCTTTGACAGAGGTGAAGGCTGAGACCCGGGCTGAGGAGGCCCCAGAG AAGAAGAGGGAGAAGCCCAAGTCTCTTCGCACCACAGCACCCAGTCATGCCAAGTTCCGT TCCACTGGACTAGAGCTGGAGACACCATCCTTGGTGCCTGTGAAGAAGAATGCCAGCACA GTGGTGGTTTCTGACAAGTACAACCTTAAACCCATCCCCCTCAAACGTCAGAGCAACGTA GCTGCTCCAGGAGATGCCACTCCCCCTGCAGAGAAGAAATACAAGCCACTCAACACAACA CCTAATGCCACCAAAGAGATCAAAGTGAAGATCATCCCGCCACAGCCTATGGAGGGCCTG GGCTTTCTGGATGCTCTTAATTCAGCCCCTGTTCCAGGCATCAAAATTAAGAAGAAAAAA AAAGTACTGTCACCTACGGCTGCCAAGCCAAGCCCCTTTGAAGGGAAAACGAGCACAGAA CCAAGCACAGCCAAACCTTCTTCCCCAGAACCAGCACCACCTTCTGAGGCAATGGACGCA GACCGTCCAGGCACCCCGGTTCCCCCTGTTGAAGTCCCGGAGCTCATGGATACAGCCTCT TTGGAGCCAGGAGCTCTGGATGCCAAGCCAGTGGAGAGTCCTGGAGATCCTAACCAACTG ACCCGGAAAGGCAGGAAGAGGAAAAGTGTGACATGGCCTGAGGAAGGCAAACTGAGAGAA TATTTCTATTTTGAATTGGATGAAACTGAACGAGTAAATGTGAATAAGATCAAGGACTTT GGTGAGGCGGCTAAGCGAGAGATACTGTCAGACCGACATGCATTTGAGACAGCGCGGCGT CTGAGCCATGATAACATGGAGGAGAAGGTGCCCTGGGTGTGCCCCCGGCCCCTGGTTCTG CCCTCACCTCTTGTCACCCCTGGAAGCAATAGTCAGGAGCGATATATCCAGGCTGAGCGG GAGAAGGGAATCCTTCAGGAGCTCTTCCTGAACAAGGAGAGTCCTCATGAGCCTGATCCT GAGCCCTACGAGCCCATACCCCCTAAACTCATCCCCCTAGATGAGGAGTGTTCCATGGAT GAGACTCCGTATGTTGAGACTCTGGAACCTGGGGGGTCAGGTGGCTCACCTGATGGGGCA GGAGGCTCCAAGTTGCCTCCAGTTCTGGCCAATCTTATGGGAAGCATGGGTGCTGGAAAG GGCCCCCAAGGCCCTGGAGGAGGAGGCATTAATGTCCAAGAGATCCTCACCTCCATCATG TGCCACATGGACTCCTAG >chr6_cox_hap1_66|geneid_v1.2_predicted_protein_66|566_AA MGSGPIDPKELLKGLDSFLNRDGEVKSVDGISKIFRFIDVGGYKLLNNWLTYSKTTNNIP LLQQILLTLQHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSS TQPAEKDKKKRKDEGKSRTTLPERPLTEVKAETRAEEAPEKKREKPKSLRTTAPSHAKFR STGLELETPSLVPVKKNASTVVVSDKYNLKPIPLKRQSNVAAPGDATPPAEKKYKPLNTT PNATKEIKVKIIPPQPMEGLGFLDALNSAPVPGIKIKKKKKVLSPTAAKPSPFEGKTSTE PSTAKPSSPEPAPPSEAMDADRPGTPVPPVEVPELMDTASLEPGALDAKPVESPGDPNQL TRKGRKRKSVTWPEEGKLREYFYFELDETERVNVNKIKDFGEAAKREILSDRHAFETARR LSHDNMEEKVPWVCPRPLVLPSPLVTPGSNSQERYIQAEREKGILQELFLNKESPHEPDP EPYEPIPPKLIPLDEECSMDETPYVETLEPGGSGGSPDGAGGSKLPPVLANLMGSMGAGK GPQGPGGGGINVQEILTSIMCHMDS* # Gene 67 (Forward). 1 exons. 36 aa. Score = 1.98 Single 2033579 2033686 1.98 + 0 0 4.05 0.00 11.38 0.00 AA 1: 36 chr6_cox_hap1_67 >chr6_cox_hap1_67|geneid_v1.2_predicted_cDNA_67|108_NN ATGGCGGCCGCCCGCTCGGGTGGAGTCTTTTATACCCGGACGCCGCCCAACGCGCCCAAA CGTGCTAGTGAAACGCCCTTGTCGCGAGACATTATACGCGAGGCGTGA >chr6_cox_hap1_67|geneid_v1.2_predicted_protein_67|36_AA MAAARSGGVFYTRTPPNAPKRASETPLSRDIIREA* # Gene 68 (Forward). 7 exons. 259 aa. Score = 8.34 First 2034203 2034280 2.23 + 0 0 7.52 1.94 3.87 0.00 AA 1: 26 chr6_cox_hap1_68 Internal 2035830 2035938 1.78 + 0 1 7.55 1.69 4.45 0.00 AA 27: 63 chr6_cox_hap1_68 Internal 2036046 2036143 0.07 + 2 0 4.01 0.30 7.58 0.00 AA 63: 95 chr6_cox_hap1_68 Internal 2036258 2036326 1.35 + 0 0 6.71 2.72 3.10 0.00 AA 96:118 chr6_cox_hap1_68 Internal 2039169 2039235 0.36 + 0 1 5.12 0.86 5.82 0.00 AA 119:141 chr6_cox_hap1_68 Internal 2041220 2041279 1.11 + 2 1 4.77 2.40 4.52 0.00 AA 141:161 chr6_cox_hap1_68 Terminal 2041839 2042134 1.46 + 2 0 6.28 0.00 6.72 0.00 AA 161:259 chr6_cox_hap1_68 >chr6_cox_hap1_68|geneid_v1.2_predicted_cDNA_68|777_NN ATGGCGGCGTCTGTATTAAACACCGTGCTGAGGCGGCTTCCTATGCTATCTCTCTTCCGA GGTTCTCACAGAGTTCAGGTTCCCCTCCAGACTCTTTGCACCAAAGCTCCCTCTGAGGAA GATTCTTTGTCCTCAGTTCCCATTTCTCCTTATAAGGATGAGCCCTGGAAATATCTGGAA TCAGAAGAATACCAGGAGCGATATGGTTCTCGCCCCGTCTGGGCTGACTACCGCCGCAAC CACAAGGGTGGTGTACCCCCACAGCGGACTCGGAAGACATGTATTCGTCGGAATAAAGTT GTTGGGAATCCCTGCCCCATCTGTCGAGATCACAAGTTGCATGTTGACTTTAGGAACGTG AAGCTCTTGGAGCAATTTGTCTGCGCCCACACGGGTATCATCTTCTATGCTCCATACACA GGAGTCTGTGTGAAGCAGCACAAGCGGTTGACCCAGGCCATCCAGAAAGCCAGGGATCAT GGTCTCCTCATTTACCACATCCCCCAGGTTGAACCACGGGACCTTGACTTCAGTACCTCT CATGGGGCTGTGAGTGCTACTCCGCCAGCCCCCACCCTGGTCTCAGGTGACCCCTGGTAC CCATGGTACAACTGGAAACAGCCACCGGAGAGAGAACTGTCTCGCCTTCGCCGGCTTTAC CAGGGTCATCTCCAAGAAGAGAGTGGCCCCCCACCTGAGTCAATGCCCAAGATGCCCCCT AGAACACCAGCGGAAGCCTCCTCCACTGGGCAGACAGGCCCTCAGAGTGCTCTGTAG >chr6_cox_hap1_68|geneid_v1.2_predicted_protein_68|259_AA MAASVLNTVLRRLPMLSLFRGSHRVQVPLQTLCTKAPSEEDSLSSVPISPYKDEPWKYLE SEEYQERYGSRPVWADYRRNHKGGVPPQRTRKTCIRRNKVVGNPCPICRDHKLHVDFRNV KLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQKARDHGLLIYHIPQVEPRDLDFSTS HGAVSATPPAPTLVSGDPWYPWYNWKQPPERELSRLRRLYQGHLQEESGPPPESMPKMPP RTPAEASSTGQTGPQSAL* # Gene 69 (Forward). 10 exons. 328 aa. Score = 16.70 First 2043223 2043329 2.45 + 0 2 2.54 0.43 14.15 0.00 AA 1: 36 chr6_cox_hap1_69 Internal 2043797 2043857 2.26 + 1 0 5.71 2.16 6.33 0.00 AA 36: 56 chr6_cox_hap1_69 Internal 2043973 2044064 -0.06 + 0 2 4.09 2.35 2.69 0.00 AA 57: 87 chr6_cox_hap1_69 Internal 2044188 2044248 2.46 + 1 0 5.13 3.28 6.03 0.00 AA 87:107 chr6_cox_hap1_69 Internal 2044369 2044482 2.45 + 0 0 5.80 0.97 8.47 0.00 AA 108:145 chr6_cox_hap1_69 Internal 2044666 2044767 2.17 + 0 0 4.84 0.95 9.24 0.00 AA 146:179 chr6_cox_hap1_69 Internal 2056712 2056792 1.45 + 0 0 6.85 1.74 3.24 0.00 AA 180:206 chr6_cox_hap1_69 Internal 2062230 2062309 0.38 + 0 2 4.63 5.87 -2.31 0.00 AA 207:233 chr6_cox_hap1_69 Internal 2067601 2067801 5.00 + 1 2 5.22 3.54 13.24 0.00 AA 233:300 chr6_cox_hap1_69 Terminal 2068975 2069059 -1.84 + 1 0 3.28 0.00 4.34 0.00 AA 300:328 chr6_cox_hap1_69 >chr6_cox_hap1_69|geneid_v1.2_predicted_cDNA_69|984_NN ATGGAGTTCCCGTTCGATGTGGACGCGCTGTTCCCGGAGCGGATCACGGTGCTGGACCAG CACCTGAGGCCCCCAGCCCGCCGACCCGGAACCACAACGCCGGCCCGTGTTGATCTACAG CAGCAAATTATGACCATTATAGATGAACTGGGCAAGGCTTCTGCCAAGGCCCAGAATCTT TCCGCTCCTATCACTAGTGCATCAAGGATGCAGAGTAACCGCCATGTTGTTTATATTCTC AAAGACAGTTCAGCCCGACCGGCTGGAAAAGGAGCCATTATTGGTTTCATCAAAGTTGGA TACAAGAAGCTCTTTGTACTGGATGATCGTGAGGCTCATAATGAGGTAGAACCACTTTGC ATCCTGGACTTTTACATCCATGAGTCTGTGCAACGCCATGGCCATGGGCGAGAACTCTTC CAGTATATGTTGCAGAAGGAGCGAGTGGAACCGCACCAACTGGCAATTGACCGACCCTCA CAGAAGCTGCTGAAATTCCTGAATAAGCACTACAATCTGGAGACCACAGTCCCACAGGTG AACAACTTTGTGATCTTTGAAGGCTTCTTTGCCCATCAACATCGTAAGTTTTTGCATTTT GTTGGTCACGTAGTCGGGGGGGACTCCCCCAGGTCTGGTAGCCCAAAGCTGCTGCTACAG CCGCCATGGGGGGGTGAATTCCTCATCCCCCAATACAGGGGCCGGACATGGTACATTCTT TCACTGACCCTCTGCCGTTTCCTGGCCTGGAATTATTTTGCACACCTTCGTTTGGAGGTT TTACAGCTGACCCGCCACCCTGAGAACTGGACCCTGCAAGCCCGGTGGCGGCTTGTGGGG CTGCCCGTCCACTTGCTCTTTTTGCGGTTCTACAAGCGTGACAAAGACGAGCATTACCGG ACCTATGATGCCTACTCCACTTTCTACCTGAATTCCAGTGGCCTCATTTGTCGCCATCGT CTAGATAAAGTGAGTCCTAGGTAG >chr6_cox_hap1_69|geneid_v1.2_predicted_protein_69|328_AA MEFPFDVDALFPERITVLDQHLRPPARRPGTTTPARVDLQQQIMTIIDELGKASAKAQNL SAPITSASRMQSNRHVVYILKDSSARPAGKGAIIGFIKVGYKKLFVLDDREAHNEVEPLC ILDFYIHESVQRHGHGRELFQYMLQKERVEPHQLAIDRPSQKLLKFLNKHYNLETTVPQV NNFVIFEGFFAHQHRKFLHFVGHVVGGDSPRSGSPKLLLQPPWGGEFLIPQYRGRTWYIL SLTLCRFLAWNYFAHLRLEVLQLTRHPENWTLQARWRLVGLPVHLLFLRFYKRDKDEHYR TYDAYSTFYLNSSGLICRHRLDKVSPR* # Gene 70 (Reverse). 19 exons. 1083 aa. Score = 84.81 Terminal 2069569 2069697 1.24 - 0 0 0.00 5.89 8.12 0.00 AA 1041:1083 chr6_cox_hap1_70 Internal 2071064 2071237 5.82 - 0 0 3.65 4.10 15.43 0.00 AA 983:1040 chr6_cox_hap1_70 Internal 2071533 2071694 1.65 - 0 0 1.59 3.37 9.18 0.00 AA 929:982 chr6_cox_hap1_70 Internal 2071793 2071955 2.80 - 1 0 -0.64 5.22 12.62 0.00 AA 874:928 chr6_cox_hap1_70 Internal 2072556 2072623 1.34 - 0 2 2.10 4.66 5.71 0.00 AA 852:874 chr6_cox_hap1_70 Internal 2072749 2072867 3.20 - 2 0 4.18 3.18 9.46 0.00 AA 812:851 chr6_cox_hap1_70 Internal 2072955 2073117 2.34 - 0 1 1.30 5.17 8.64 0.00 AA 758:812 chr6_cox_hap1_70 Internal 2073310 2073450 0.91 - 0 0 1.32 2.06 9.71 0.00 AA 711:757 chr6_cox_hap1_70 Internal 2075829 2076191 4.51 - 0 0 2.13 4.63 13.63 0.00 AA 590:710 chr6_cox_hap1_70 Internal 2076389 2076599 5.56 - 1 0 0.02 4.46 19.67 0.00 AA 519:589 chr6_cox_hap1_70 Internal 2078984 2079099 0.87 - 0 2 0.94 1.88 10.44 0.00 AA 481:519 chr6_cox_hap1_70 Internal 2079268 2079378 4.16 - 0 0 3.78 5.95 8.32 0.00 AA 444:480 chr6_cox_hap1_70 Internal 2081158 2081349 5.53 - 0 0 2.02 5.43 15.15 0.00 AA 380:443 chr6_cox_hap1_70 Internal 2081428 2081631 6.83 - 0 0 4.60 3.55 17.36 0.00 AA 312:379 chr6_cox_hap1_70 Internal 2081836 2082090 13.98 - 0 0 3.44 3.85 36.53 0.00 AA 227:311 chr6_cox_hap1_70 Internal 2086767 2086823 4.82 - 0 0 3.06 6.34 10.47 0.00 AA 208:226 chr6_cox_hap1_70 Internal 2087147 2087309 4.72 - 1 0 2.33 -0.07 20.90 0.00 AA 153:207 chr6_cox_hap1_70 Internal 2087393 2087631 7.23 - 0 2 3.57 4.30 18.76 0.00 AA 74:153 chr6_cox_hap1_70 First 2088980 2089198 7.30 - 0 0 -0.46 7.56 20.10 0.00 AA 1: 73 chr6_cox_hap1_70 >chr6_cox_hap1_70|geneid_v1.2_predicted_cDNA_70|3249_NN ATGGCGACGCCGGCGGGTCTGGAGCGCTGGGTTCAGGACGAGCTGCACTCGGTGTTGGGG CTGAGCGAGCGGCACGTCGCCCAGTTTCTGATCGGTACCGCACAGCGCTGCACCTCTGCC GAGGAGTTCGTGCAGCGCCTACGAGACACTGATACCTTGGATCTCAGTGGGCCGGCCCGG GACTTCGCCCTGAGACTCTGGAACAAGGTGTCGGCAGGGGTACCACGAAAGGCAGTGGTA GAAAAGCCAGCTCGGGCAGCAGAGCGAGAGGCCCGGGCCCTGCTGGAGAAGAACCGATCT TATAGGTTACTGGAAGACAGTGAAGAGAGCAGTGAGGAGACTGTGAGTAGGGCTGGAAGC AGCCTCCAGAAGAAACGTAAAAAGCGGAAACACCTCAGGAAGAAGCGTGAGGAAGAAGAG GAGGAAGAGGCTTCTGAGAAAGGGAAGAAGAAAACAGGGGGGAGTAAACAGCAGACAGAG AAGCCAGAGTCGGAAGATGAGTGGGAACGGACAGAGCGTGAACGCCTTCAGGACCTGGAG GAGCGTGATGCCTTTGCTGAGCGGGTTCGACAGCGGGACAAGGATCGGACTCGAAATGTC CTGGAACGGTCAGACAAGAAGGCTTATGAAGAGGCTCAGAAGCGCCTCAAGATGGCCGAG GAAGACCGGAAGGCCATGGTCCCTGAGCTGCGGAAGAAATCTCGCCGAGAGTACCTGGCT AAGCGGGAGCGAGAGAAGCTTGAGGACCTGGAGGCGGAGCTGGCTGATGAGGAGTTCCTT TTTGGGGACGTGGAGCTGAGCCGGCACGAGCGGCAGGAGCTCAAATATAAGCGGCGAGTG CGGGATCTCGCCCGGGAGTACCGGGCAGCTGGGGAGCAGGAGAAGCTGGAGGCCACCAAT CGCTACCACATGCCCAAGGAAACCCGAGGACAGCCAGCCCGAGCTGTGGATCTAGTGGAG GAGGAATCAGGAGCCCCTGGGGAGGAGCAGCGGCGCTGGGAGGAGGCGCGGCTTGGGGCA GCGTCCCTGAAGTTTGGGGCCCGAGATGCTGCCTCTCAGGAGCCCAAGTATCAACTGGTG CTGGAGGAGGAGGAGACCATTGAGTTTGTCCGGGCCACTCAGCTCCAGGGTGATGAGGAG CCGTCAGCTCCACCCACTTCAACTCAGGCCCAGCAGAAAGAGTCCATCCAGGCCGTCCGC CGCAGCCTCCCGGTGTTCCCATTTCGAGAGGAGCTCCTGGCTGCTATTGCAAATCACCAA GTCCTCATCATTGAAGGCGAGACAGGCTCAGGGAAGACCACCCAGATCCCGCAGTATCTC TTTGAGGAGGGTTATACAAACAAGGGTATGAAGATTGCCTGCACCCAACCCCGGAGAGTG GCTGCCATGAGTGTGGCCGCCCGAGTGGCCCGGGAGATGGGTGTGAAGCTTGGGAATGAG GTTGGCTACAGCATCCGCTTTGAGGACTGCACATCAGAGCGAACTGTCCTCCGCTACATG ACAGATGGGATGCTTCTCCGGGAGTTCCTCTCTGAGCCTGACCTGGCGAGTTACAGCGTG GTGATGGTGGATGAGGCACACGAAAGGACCCTACACACAGACATTCTCTTTGGATTGATC AAGGATGTTGCTCGCTTCCGACCTGAGCTCAAGGTCCTGGTGGCTTCAGCCACAATGGAC ACTGCCCGTTTTTCCACCTTCTTTGATGACGCCCCTGTGTTTCGAATCCCCGGACGCAGG TTTCCTGTGGACATCTTCTACACCAAGGCTCCAGAGGCTGACTACTTGGAAGCTTGTGTA GTATCTGTGTTGCAGATCCATGTGACCCAGCCCCCTGGGGATATCCTGGTGTTCCTGACA GGACAGGTGCCTGACATGGTGGGGAGAGGGGATGATGTATCCCAGGGGAAGACAGGGCCG GCATGTTGGCCTTCTGTGACTCTGGGACCCCTGCTGCTCTCCCTACCCTCTATCCAGGAG GAGATTGAGGCTGCCTGTGAGATGCTCCAGGATCGCTGCCGCCGCCTGGGCTCCAAAATC CGGGAGCTCCTGGTGCTGCCCATTTATGCCAATCTGCCCTCTGACATGCAGGCCCGTATC TTCCAGCCCACACCACCTGGGGCACGAAAGGTGGTTGTGGCAACGAACATTGCTGAGACA TCACTCACCATTGAGGGCATCATTTATGTGCTGGATCCAGGGTTCTGTAAGCAGAAGAGC TACAACCCCCGCACAGGCATGGAATCGCTCACTGTCACACCCTGCAGCAAGGCCTCAGCC AATCAGCGAGCTGGCAGGGCAGGTCGGGTGGCTGCAGGGAAGTGCTTCCGCCTGTATACC GCCTGGGCCTATCAGCACGAGCTTGAGGAAACCACAGTGCCTGAGATCCAGAGGACCAGC TTGGGCAATGTCGTGTTGCTGCTCAAGAGCTTAGGGATCCATGACCTAATGCACTTTGAT TTCCTGGACCCTCCACCATATGAGACACTGCTGCTGGCTTTGGAGCAGCTGTATGCTCTG GGAGCCCTCAACCACCTTGGGGAGCTCACCACGTCTGGTCGAAAGATGGCAGAGCTGCCG GTGGACCCCATGCTGTCCAAAATGATCTTAGCCTCTGAGAAGTACAGCTGTTCAGAGGAG ATCCTGACAGTGGCTGCCATGCTCTCTGTCAACAACTCCATCTTCTACCGACCAAAGGAC AAGGTCGTCCATGCTGACAATGCCCGTGTCAACTTCTTTCTCCCTGGCGGTGACCACCTG GTTCTGCTAAATGTTTACACACAGTGGGCTGAGAGTGGTTACTCTTCCCAGTGGTGCTAT GAGAACTTTGTACAGTTCAGATCGATGCGCCGAGCCCGGGATGTGCGGGAACAGCTGGAA GGGCTCTTGGAACGTGTGGAAGTTGGTCTCAGTTCCTGCCAGGGGGACTATATCCGTGTA CGCAAGGCCATCACTGCTGGTTACTTTTACCACACGGCACGGTTGACTCGGAGTGGCTAC CGCACAGTGAAACAGCAGCAGACAGTCTTCATTCATCCCAACTCCTCCCTCTTTGAGCAA CAGCCACGCTGGCTGCTCTACCACGAACTTGTCTTGACCACCAAAGAGTTCATGAGACAG GTACTGGAGATTGAGAGCAGTTGGCTTCTGGAGGTGGCTCCCCATTATTATAAGGCCAAG GAGCTAGAAGATCCCCATGCTAAGAAAATGCCCAAAAAAATAGGCAAAACACGAGAAGAG CTAGGGTAA >chr6_cox_hap1_70|geneid_v1.2_predicted_protein_70|1083_AA MATPAGLERWVQDELHSVLGLSERHVAQFLIGTAQRCTSAEEFVQRLRDTDTLDLSGPAR DFALRLWNKVSAGVPRKAVVEKPARAAEREARALLEKNRSYRLLEDSEESSEETVSRAGS SLQKKRKKRKHLRKKREEEEEEEASEKGKKKTGGSKQQTEKPESEDEWERTERERLQDLE ERDAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLA KREREKLEDLEAELADEEFLFGDVELSRHERQELKYKRRVRDLAREYRAAGEQEKLEATN RYHMPKETRGQPARAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPKYQLV LEEEETIEFVRATQLQGDEEPSAPPTSTQAQQKESIQAVRRSLPVFPFREELLAAIANHQ VLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNE VGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLI KDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACV VSVLQIHVTQPPGDILVFLTGQVPDMVGRGDDVSQGKTGPACWPSVTLGPLLLSLPSIQE EIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAET SLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYT AWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYAL GALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKD KVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLE GLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSGYRTVKQQQTVFIHPNSSLFEQ QPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGKTREE LG* # Gene 71 (Reverse). 3 exons. 166 aa. Score = 11.43 Terminal 2093626 2093645 -0.84 - 2 0 0.00 5.59 2.00 0.00 AA 160:166 chr6_cox_hap1_71 Internal 2095536 2095746 11.03 - 0 1 4.32 5.63 25.16 0.00 AA 90:160 chr6_cox_hap1_71 First 2100765 2101031 1.25 - 0 0 2.79 1.79 8.75 0.00 AA 1: 89 chr6_cox_hap1_71 >chr6_cox_hap1_71|geneid_v1.2_predicted_cDNA_71|498_NN ATGAGCCGCCTGTTCTATGGGGTGAAGGCAGGGCCAGGGGTGGGGGCCCCCCGCCGCAGT GGACACACCTTCACCGTCAACCCCCGGCGGTCTGTGCCCCCTGCGACCCCAGCCACCCCA ACCTCTCCAGCCACAGTTGATGCTGCAGTCCCGGGGGCTGGGAAGAAGCGGTACCCAACT GCCGAGGAGATCTTGGTTCTGGGGGGCTACCTCCGTCTCAGCCGCAGCTGCCTTGCCAAG GGGTCCCCCGAAAGACACCACAAACAGCTTAAGATCTCCTTCAGCGAGACAGCCCTGGAG ACCACGTACCAATACCCCTCCGAGAGTTCGGTACTGGAGGAGCTGGGCCCGGAGCCTGAG GTCCCCAGTGCCCCCAACCCTCCAGCAGCCCAACCCGACGACGAAGAGGATGAGGAAGAG CTGCTGCTGCTGCAGCCAGAGCTCCAGGGCGGGCTGCGCACCAAGGCCCTGATTGTGGAT GAGTCCTGCCGGCGGTGA >chr6_cox_hap1_71|geneid_v1.2_predicted_protein_71|166_AA MSRLFYGVKAGPGVGAPRRSGHTFTVNPRRSVPPATPATPTSPATVDAAVPGAGKKRYPT AEEILVLGGYLRLSRSCLAKGSPERHHKQLKISFSETALETTYQYPSESSVLEELGPEPE VPSAPNPPAAQPDDEEDEEELLLLQPELQGGLRTKALIVDESCRR* # Gene 72 (Reverse). 4 exons. 263 aa. Score = 6.62 Terminal 2105018 2105299 1.44 - 0 0 0.00 4.41 9.49 0.00 AA 170:263 chr6_cox_hap1_72 Internal 2105633 2105809 2.82 - 0 0 3.99 3.89 7.74 0.00 AA 111:169 chr6_cox_hap1_72 Internal 2106404 2106600 -0.29 - 2 0 2.76 4.16 1.41 0.00 AA 45:110 chr6_cox_hap1_72 First 2107199 2107331 2.64 - 0 1 3.20 4.88 6.99 0.00 AA 1: 45 chr6_cox_hap1_72 >chr6_cox_hap1_72|geneid_v1.2_predicted_cDNA_72|789_NN ATGGCCCCTGCACTGCTCCTGATCCCTGCTGCCCTCGCCTCTTTCATCCTGGCCTTTGGC ACCGGAGTGGAGTTCGTGCGCTTTACCTCCCTTCGGCCACTTCTTGGAGGGATCCCGGAG TCTGGTGGTCCGGATGCCCGCCAGGGATGGCTGGCTGCCCTGCAGGACCGCAGCATCCTT GCCCCCCTGGCATGGGATCTGGGGCTCCTGCTTCTATTTGTTGGGCAGCACAGCCTCATG GCAGCTGAAAGAGTGAAGGCATGGACATCCCGGTACTTTGGGGTCCTTCAGAGGTCACTG TATGTGGCCTGCACTGCCCTGGCCTTGCAGCTGGTGATGCGGTACTGGGAGCCCATACCC AAAGGCCCTGTGTTGTGGGAGGCTCGGGCTGAGCCATGGGCCACCTGGGTGCCGCTCCTC TGCTTTGTGCTCCATGTCATCTCCTGGCTCCTCATCTTTAGCATCCTTCTCGTCTTTGAC TATGCTGAGCTCATGGGCCTCAAACAGGTATACTACCATGTGCTGGGGCTGGGCGAGCCT CTGGCCCTGAAGTCTCCCCGGGCTCTCAGACTCTTCTCCCACCTGCGCCACCCAGTGTGT GTGGAGCTGCTGACAGTGCTGTGGGTGGTGCCTACCCTGGGCACGGACCGTCTCCTCCTT GCTTTCCTCCTTACCCTCTACCTGGGCCTGGCTCACGGGCTTGATCAGCAAGACCTCCGC TACCTCCGGGCCCAGCTACAAAGAAAACTCCACCTGCTCTCTCGGCCCCAGGATGGGGAG GCAGAGTGA >chr6_cox_hap1_72|geneid_v1.2_predicted_protein_72|263_AA MAPALLLIPAALASFILAFGTGVEFVRFTSLRPLLGGIPESGGPDARQGWLAALQDRSIL APLAWDLGLLLLFVGQHSLMAAERVKAWTSRYFGVLQRSLYVACTALALQLVMRYWEPIP KGPVLWEARAEPWATWVPLLCFVLHVISWLLIFSILLVFDYAELMGLKQVYYHVLGLGEP LALKSPRALRLFSHLRHPVCVELLTVLWVVPTLGTDRLLLAFLLTLYLGLAHGLDQQDLR YLRAQLQRKLHLLSRPQDGEAE* # Gene 73 (Reverse). 1 exons. 102 aa. Score = 1.42 Single 2113561 2113866 1.42 - 0 0 0.00 -1.15 19.15 0.00 AA 1:102 chr6_cox_hap1_73 >chr6_cox_hap1_73|geneid_v1.2_predicted_cDNA_73|306_NN ATGCCAGAAACCCTTAAAAAGCGAAGGAATTTCCCAGAGCTGAAGATCAAAGGCCCGAGA AAGAAATTTGCCCAAAAGATGATTCAAAAGGCAAGGAGGAAGCTTATCTATGAAAAAGTG AAGCACTATCACAAGGAATATAGGCAGATGTACAGAACTGAAATTCGAATGGCTAGGATG GCCAGAAAAGCTGGCAACTTCTATGTACCTGCAAAACCCAAATTGCCGTTTGTCATCAGG ATCAGAGGTATCAGTGGTGTGAACCCAAAGGTCCGAAAGGTGTTGCAGCTTCTTCGCCTT TGTTAA >chr6_cox_hap1_73|geneid_v1.2_predicted_protein_73|102_AA MPETLKKRRNFPELKIKGPRKKFAQKMIQKARRKLIYEKVKHYHKEYRQMYRTEIRMARM ARKAGNFYVPAKPKLPFVIRIRGISGVNPKVRKVLQLLRLC* # Gene 74 (Reverse). 12 exons. 1046 aa. Score = 37.89 Terminal 2116818 2116985 -0.40 - 0 0 0.00 4.48 6.15 0.00 AA 991:1046 chr6_cox_hap1_74 Internal 2118907 2119017 1.00 - 0 0 2.73 3.92 5.02 0.00 AA 954:990 chr6_cox_hap1_74 Internal 2119106 2119231 1.60 - 0 0 3.89 1.04 9.11 0.00 AA 912:953 chr6_cox_hap1_74 Internal 2119458 2119640 1.03 - 0 0 3.67 2.36 6.03 0.00 AA 851:911 chr6_cox_hap1_74 Internal 2119772 2119891 0.21 - 0 0 2.00 2.04 6.95 0.00 AA 811:850 chr6_cox_hap1_74 Internal 2119975 2120205 2.65 - 0 0 3.87 1.81 10.59 0.00 AA 734:810 chr6_cox_hap1_74 Internal 2123737 2123807 -0.36 - 2 0 2.02 4.79 1.39 0.00 AA 710:733 chr6_cox_hap1_74 Internal 2128020 2128079 1.04 - 2 1 3.69 2.92 5.19 0.00 AA 690:710 chr6_cox_hap1_74 Internal 2128227 2129707 24.94 - 1 1 4.11 5.08 61.06 0.00 AA 196:690 chr6_cox_hap1_74 Internal 2130001 2130070 0.54 - 2 2 5.16 5.03 -1.44 0.00 AA 173:196 chr6_cox_hap1_74 Internal 2130156 2130536 3.08 - 2 1 4.74 3.34 8.08 0.00 AA 46:173 chr6_cox_hap1_74 First 2131393 2131528 2.57 - 0 1 1.41 2.96 13.74 0.00 AA 1: 46 chr6_cox_hap1_74 >chr6_cox_hap1_74|geneid_v1.2_predicted_cDNA_74|3138_NN ATGGAGGACACCCAGGCTATTGACTGGGATGTTGAAGAAGAGGAGGAGACAGAGCAATCC AGTGAATCCTTGAGGTGTAACGTGGAGCCAGTAGGGCGGCTACATATCTTTAGTGGTGCC CATGGACCAGAAAAAGATTTCCCACTACACCTCGGGAAGAATGTGGTAGGCCGAATGCCT GACTGCTCTGTGGCCCTGCCCTTTCCATCTATCTCCAAACAACATGCAGAGATTGAAATC TTAGCCTGGGACAAGGCACCTATCCTCCGAGACTGTGGGAGCCTTAATGGTACTCAAATC CTGAGACCTCCTAAGGTTTTGAGCCCTGGGGTGAGTCACCGTCTGAGGGACCAGGAATTG ATTCTCTTTGCTGACTTGCTCTGCCAGTACCATCGCCTGGATGTCTCTCTGCCCTTTGTC TCCCGGGGCCCTCTGACAGTAGAAGAGACACCCAGAGTACAGGGAGAAACTCAACCCCAG AGGCTTCTGTTGGCTGAGGACTCGGAGGAGGAAGTAGATTTTCTTTCTGAAAGGCGTATG GTAAAAAAATCAAGGACCACATCTTCCTCTGTGATAGTTCCAGAGAGTGATGAAGAGGGG CATTCCCCGGTCCTGGGCGGCCTTGGGCCGCCTTTTGCCTTCAATTTGAACAGTGACACA GATGTGGAAGAAGGTCAGCAACCAGCCACAGAGGAGGCCTCCTCAGCTGCCAGAAGAGGT GCCACTGTAGAGGCAAAGCAGTCTGAAGCTGAAGTTGTAACTGAAATCCAGCTTGAAAAG GATCAGCCTTTAGTGAAGGAGAGGGACAATGATACAAAAGTCAAGAGGGGTGCAGGGAAT GGGGTGGTTCCAGCTGGGGTGATTCTGGAGAGGAGCCAACCTCCTGGAGAGGACAGTGAC ACAGATGTGGATGATGACAGCAGGCCTCCTGGAAGGCCAGCTGAGGTCCATTTGGAAAGG GCTCAGCCTTTTGGCTTCATCGACAGCGACACTGATGCGGAAGAAGAGAGGATCCCAGCA ACCCCAGTTGTCATTCCTATGAAGAAGAGGAAGATCTTCCATGGAGTAGGTACAAGGGGT CCTGGAGCACCAGGCCTGGCCCATCTGCAGGAGAGCCAGGCTGGTAGTGATACAGATGTG GAAGAAGGCAAGGCCCCACAGGCTGTCCCTCTGGAGAAAAGCCAAGCTTCCATGGTTATC AACAGCGATACAGATGACGAGGAAGAAGTCTCAGCAGCGCTGACTTTGGCACATCTGAAA GAGAGCCAGCCTGCTATATGGAACAGAGATGCAGAAGAGGACATGCCCCAACGTGTGGTC CTTCTGCAGCGAAGCCAAACCACCACTGAGAGAGACAGTGACACAGACGTGGAGGAGGAA GAGCTCCCAGTGGAAAATAGAGAAGCTGTCCTCAAGGATCACACAAAGATTAGAGCCCTT GTTAGAGCACATTCAGAAAAGGACCAACCTCCTTTTGGGGACAGTGATGACAGTGTGGAA GCAGATAAGAGCTCACCTGGGATCCACCTGGAGAGAAGCCAAGCCTCCACCACAGTGGAC ATCAACACACAAGTGGAGAAGGAAGTCCCGCCAGGGTCAGCCATTATACATATAAAGAAG CATCAGGTGTCTGTGGAGGGGACAAATCAAACAGATGTGAAAGCAGTTGGGGGACCAGCA AAGCTGCTTGTGGTATCTCTAGAGGAAGCCTGGCCTCTGCATGGGGACTGTGAAACAGAT GCAGAGGAGGGCACCTCCCTAACAGCCTCAGTAGTTGCAGATGTAAGAAAGAGCCAGCTT CCAGCAGAAGGGGATGCTGGGGCAGAGTGGGCTGCAGCTGTTCTTAAGCAGGAGAGAGCT CATGAGGTGGGGGCCCAGGGTGGGCCACCTGTGGCACAAGTGGAGCAGGACCTCCCTATC TCAAGAGAGAACCTCACAGATCTGGTGGTGGACACAGACACTCTAGGGGAATCCACCCAG CCACAGAGAGAGGGAGCCCAGGTCCCCACAGGAAGGGAGAGAGAACAACATGTGGGTGGG ACCAAGGACTCTGAAGACAACTATGGTGATTCTGAAGATCTGGACCTACAAGCTACCCAG TGCTTTCTGGAGAATCAGGGCCTGGAAGGCCTCCTGAATTGCAAGATGCCACCTGCTGAG AAGGCTTCCAGGATCAGAGCTGCTGAGAAGGTTTCCAGGCTTCTTGAGACACCAATTCAT GCCTCCCAGATCCAAAAGGTGGAACCAGCAGGTAGATCTAGGTTCACCCCGGAGCTCCAG CCTAAGGCCTCTCAAAGCCGCAAGAGGTCTTTAGCTACCATGGATTCACCACCACATCAA AAACAGCCCCAAAGAGGGGAAGTCTCCCAGAAGACAGTGATTATCAAGGAAGAGGAAGAA GATACTGCAGAGAAGCCAGGGAAGGAAGAGGATGTCGTGACTCCAAAACCAGGCAAGAGA AAGAGAGACCAGGCAGAGGAGGAGCCCAACAGAATACCAAGCCGCAGCCTCCGACGGACC AAACTTAACCAAGAATCAACAGCCCCCAAAGTGCTCTTCACAGGAGTGGTGGATGCTCGG GGAGAGCGGGCTGTGCTGGCACTGGGGGGAAGTCTGGCTGGTTCAGCGGCAGAGGCTTCC CACCTGGTCACTGATCGCATCCGCCGGACAGTCAAGTTCCTGTGTGCCCTGGGGCGGGGA ATCCCCATTCTGTCCCTGGACTGGCTGCATCAGTCCCGCAAGGCTGGTTTCTTCTTACCC CCGGATGAATATGTGGTGACCGACCCTGAGCAAGAGAAGAACTTTGGCTTTAGCCTTCAA GACGCACTGAGCAGGGCTCGGGAGCGAAGGCTGCTAGAGGGCTATGAGATCTATGTGACC CCTGGAGTCCAGCCACCACCACCTCAGATGGGAGAGATTATTAGCTGCTGTGGAGGCACA TACCTACCCAGCATGCCTCGGTCCTATAAGCCTCAGAGAGTTGTGATCACATGCCCTCAG GACTTCCCTCATTGCTCCATTCCACTACGGGTTGGGCTGCCCCTCCTCTCGCCTGAGTTC CTGCTGACTGGAGTGCTGAAGCAGGAAGCCAAGCCAGAGGCCTTTGTCCTCTCCCCTTTG GAGATGTCATCCACCTGA >chr6_cox_hap1_74|geneid_v1.2_predicted_protein_74|1046_AA MEDTQAIDWDVEEEEETEQSSESLRCNVEPVGRLHIFSGAHGPEKDFPLHLGKNVVGRMP DCSVALPFPSISKQHAEIEILAWDKAPILRDCGSLNGTQILRPPKVLSPGVSHRLRDQEL ILFADLLCQYHRLDVSLPFVSRGPLTVEETPRVQGETQPQRLLLAEDSEEEVDFLSERRM VKKSRTTSSSVIVPESDEEGHSPVLGGLGPPFAFNLNSDTDVEEGQQPATEEASSAARRG ATVEAKQSEAEVVTEIQLEKDQPLVKERDNDTKVKRGAGNGVVPAGVILERSQPPGEDSD TDVDDDSRPPGRPAEVHLERAQPFGFIDSDTDAEEERIPATPVVIPMKKRKIFHGVGTRG PGAPGLAHLQESQAGSDTDVEEGKAPQAVPLEKSQASMVINSDTDDEEEVSAALTLAHLK ESQPAIWNRDAEEDMPQRVVLLQRSQTTTERDSDTDVEEEELPVENREAVLKDHTKIRAL VRAHSEKDQPPFGDSDDSVEADKSSPGIHLERSQASTTVDINTQVEKEVPPGSAIIHIKK HQVSVEGTNQTDVKAVGGPAKLLVVSLEEAWPLHGDCETDAEEGTSLTASVVADVRKSQL PAEGDAGAEWAAAVLKQERAHEVGAQGGPPVAQVEQDLPISRENLTDLVVDTDTLGESTQ PQREGAQVPTGREREQHVGGTKDSEDNYGDSEDLDLQATQCFLENQGLEGLLNCKMPPAE KASRIRAAEKVSRLLETPIHASQIQKVEPAGRSRFTPELQPKASQSRKRSLATMDSPPHQ KQPQRGEVSQKTVIIKEEEEDTAEKPGKEEDVVTPKPGKRKRDQAEEEPNRIPSRSLRRT KLNQESTAPKVLFTGVVDARGERAVLALGGSLAGSAAEASHLVTDRIRRTVKFLCALGRG IPILSLDWLHQSRKAGFFLPPDEYVVTDPEQEKNFGFSLQDALSRARERRLLEGYEIYVT PGVQPPPPQMGEIISCCGGTYLPSMPRSYKPQRVVITCPQDFPHCSIPLRVGLPLLSPEF LLTGVLKQEAKPEAFVLSPLEMSST* # Gene 75 (Forward). 4 exons. 445 aa. Score = 47.33 First 2136859 2136915 0.66 + 0 0 1.11 4.64 5.52 0.00 AA 1: 19 chr6_cox_hap1_75 Internal 2138889 2138997 5.75 + 0 1 2.06 4.38 17.23 0.00 AA 20: 56 chr6_cox_hap1_75 Internal 2139270 2139380 2.30 + 2 1 3.91 3.33 7.40 0.00 AA 56: 93 chr6_cox_hap1_75 Terminal 2139692 2140749 38.62 + 2 0 2.63 0.00 105.11 0.00 AA 93:445 chr6_cox_hap1_75 >chr6_cox_hap1_75|geneid_v1.2_predicted_cDNA_75|1335_NN ATGAGGGAAATCGTGCACATCCAGGCTGGTCAGTGTGGCAACCAGATCGGTGCCAAGTTC TGGGAGGTGATCAGTGATGAACATGGCATCGACCCCACCGGCACCTACCACGGGGACAGC GACCTGCAGCTGGACCGCATCTCTGTGTACTACAATGAAGCCACAGGTGGCAAATATGTT CCTCGTGCCATCCTGGTGGATCTAGAACCTGGGACCATGGACTCTGTTCGCTCAGGTCCT TTTGGCCAGATCTTTAGACCAGACAACTTTGTATTTGGTCAGTCTGGGGCAGGTAACAAC TGGGCCAAAGGCCACTACACAGAGGGCGCCGAGCTGGTTGATTCTGTCCTGGATGTGGTA CGGAAGGAGGCAGAGAGCTGTGACTGCCTGCAGGGCTTCCAGCTGACCCACTCACTGGGC GGGGGCACAGGCTCTGGAATGGGCACTCTCCTTATCAGCAAGATCCGAGAAGAATACCCT GATCGCATCATGAATACCTTCAGTGTGGTGCCTTCACCCAAAGTGTCTGACACCGTGGTC GAGCCCTACAATGCCACCCTCTCCGTCCATCAGTTGGTAGAGAATACTGATGAGACCTAT TGCATTGACAACGAGGCCCTCTATGATATCTGCTTCCGCACTCTGAAGCTGACCACACCA ACCTACGGGGATCTGAACCACCTTGTCTCAGCCACCATGAGTGGTGTCACCACCTGCCTC CGTTTCCCTGGCCAGCTCAATGCTGACCTCCGCAAGTTGGCAGTCAACATGGTCCCCTTC CCACGTCTCCATTTCTTTATGCCTGGCTTTGCCCCTCTCACCAGCCGTGGAAGCCAGCAG TATCGAGCTCTCACAGTGCCGGAACTCACCCAGCAGGTCTTCGATGCCAAGAACATGATG GCTGCCTGTGACCCCCGCCACGGCCGATACCTCACCGTGGCTGCTGTCTTCCGTGGTCGG ATGTCCATGAAGGAGGTCGATGAGCAGATGCTTAACGTGCAGAACAAGAACAGCAGCTAC TTTGTGGAATGGATCCCCAACAATGTCAAGACAGCCGTCTGTGACATCCCACCTCGTGGC CTCAAGATGGCAGTCACCTTCATTGGCAATAGCACAGCCATCCAGGAGCTCTTCAAGCGC ATCTCGGAGCAGTTCACTGCCATGTTCCGCCGGAAGGCCTTCCTCCACTGGTACACAGGC GAGGGCATGGACGAGATGGAGTTCACCGAGGCTGAGAGCAACATGAACGACCTCGTCTCT GAGTATCAGCAGTACCAGGATGCCACCGCAGAAGAGGAGGAGGATTTCGGTGAGGAGGCC GAAGAGGAGGCCTAA >chr6_cox_hap1_75|geneid_v1.2_predicted_protein_75|445_AA MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS EYQQYQDATAEEEEDFGEEAEEEA* # Gene 76 (Reverse). 12 exons. 418 aa. Score = 28.27 Terminal 2144466 2144495 -2.13 - 0 0 0.00 4.37 0.64 0.00 AA 409:418 chr6_cox_hap1_76 Internal 2146373 2146537 3.65 - 0 0 3.44 3.15 11.75 0.00 AA 354:408 chr6_cox_hap1_76 Internal 2146779 2146916 0.91 - 0 0 -0.52 0.94 14.14 0.00 AA 308:353 chr6_cox_hap1_76 Internal 2147033 2147078 1.31 - 1 0 3.09 6.56 1.30 0.00 AA 292:307 chr6_cox_hap1_76 Internal 2147270 2147451 8.39 - 0 2 0.60 3.43 27.42 0.00 AA 232:292 chr6_cox_hap1_76 Internal 2156511 2156663 5.82 - 0 0 1.37 1.82 22.26 0.00 AA 181:231 chr6_cox_hap1_76 Internal 2156849 2156944 2.74 - 0 0 2.37 5.57 7.43 0.00 AA 149:180 chr6_cox_hap1_76 Internal 2157032 2157151 2.89 - 0 0 2.37 2.79 11.99 0.00 AA 109:148 chr6_cox_hap1_76 Internal 2157543 2157686 2.45 - 0 0 0.44 2.97 13.52 0.00 AA 61:108 chr6_cox_hap1_76 Internal 2157967 2158057 3.15 - 1 0 2.25 7.22 6.17 0.00 AA 30: 60 chr6_cox_hap1_76 Internal 2158145 2158220 -0.91 - 2 2 3.21 2.69 1.39 0.00 AA 5: 30 chr6_cox_hap1_76 First 2158500 2158512 -0.00 - 0 1 5.03 1.94 2.04 0.00 AA 1: 5 chr6_cox_hap1_76 >chr6_cox_hap1_76|geneid_v1.2_predicted_cDNA_76|1254_NN ATGGTGGTCTCCGGGTTCTGCCGAAGCCCCCCAGTCATGGTGGCTGGAGGGCGTGTCTTT GTCCTGCCCTGCATCCAACAGATCCAGAGGATCTCTCTCAACACACTGACCCTCAATGTC AAGAGTGAAAAGGTTTACACTCGCCATGGGGTCCCCATCTCAGTCACTGGCATTGCCCAG GTAAAAATCCAGGGGCAGAACAAGGAGATGTTGGCGGCCGCCTGTCAGATGTTCCTGGGG AAGACGGAGGCTGAGATTGCCCACATTGCCCTGGAGACGTTAGAGGGCCACCAGAGGGCC ATCATGGCCCACATGACTGTGGAGGAGATCTATAAGGACAGGCAGAAATTCTCAGAACAG GTTTTCAAAGTGGCCTCCTCAGACCTGGTCAACATGGGCATCAGTGTGGTTAGCTACACT CTGAAGGACATTCACGATGACCAGGACTATTTGCACTCTTTGGGGAAGGCTCGAACAGCT CAAGTCCAAAAAGATGCACGGATTGGAGAAGCAGAGGCCAAGAGAGATGCTGGGATCCGG GAAGCTAAAGCCAAGCAGGAAAAGGTGTCTGCTCAGTACCTGAGTGAGATCGAGATGGCC AAGGCACAGAGAGATTACGAACTGAAGAAGGCCGCCTATGACATCGAGGTCAACACCCGC CGAGCACAGGCTGACCTGGCCTATCAGCTTCAGGTGGCCAAGACTAAGCAGCAGATTGAG GAGCAGCGGGTGCAGGTGCAGGTGGTGGAGCGGGCCCAGCAGGTGGCAGTGCAGGAGCAG GAGATCGCCCGGCGGGAGAAGGAGCTGGAGGCCCGGGTGCGGAAGCCAGCGGAAGCGGAG CGCTACAAGCTGGAGCGCCTAGCCGAGGCAGAGAAGTCCCAACTAATTATGCAGGCGGAG GCAGAAGCCGCGTCTGTGCGGATGCGTGGGGAAGCTGAGGCCTTTGCCATAGGGGCCCGA GCCCGAGCCGAGGCTGAGCAGATGGCCAAGAAGGCAGAAGCCTTCCAGCTGTACCAAGAG GCTGCTCAGCTGGACATGCTGCTAGAGAAGCTGCCCCAGGTGGCAGAGGAGATCAGTGGT CCCTTGACTTCAGCCAATAAGATCACACTGGTGTCCAGCGGCAGTGGGACCATGGGGGCA GCCAAAGTGACTGGGGAAGTACTGGACATTCTAACTCGCCTGCCAGAGAGTGTGGAAAGA CTCACAGGCGTGAGCATCTCCCAGGTGAATCACAAGCCTTTGAGAACAGCCTGA >chr6_cox_hap1_76|geneid_v1.2_predicted_protein_76|418_AA MVVSGFCRSPPVMVAGGRVFVLPCIQQIQRISLNTLTLNVKSEKVYTRHGVPISVTGIAQ VKIQGQNKEMLAAACQMFLGKTEAEIAHIALETLEGHQRAIMAHMTVEEIYKDRQKFSEQ VFKVASSDLVNMGISVVSYTLKDIHDDQDYLHSLGKARTAQVQKDARIGEAEAKRDAGIR EAKAKQEKVSAQYLSEIEMAKAQRDYELKKAAYDIEVNTRRAQADLAYQLQVAKTKQQIE EQRVQVQVVERAQQVAVQEQEIARREKELEARVRKPAEAERYKLERLAEAEKSQLIMQAE AEAASVRMRGEAEAFAIGARARAEAEQMAKKAEAFQLYQEAAQLDMLLEKLPQVAEEISG PLTSANKITLVSSGSGTMGAAKVTGEVLDILTRLPESVERLTGVSISQVNHKPLRTA* # Gene 77 (Reverse). 2 exons. 147 aa. Score = 9.28 Terminal 2160289 2160549 6.89 - 0 0 0.00 6.99 19.22 0.00 AA 61:147 chr6_cox_hap1_77 First 2160662 2160841 2.40 - 0 0 3.61 2.62 9.15 0.00 AA 1: 60 chr6_cox_hap1_77 >chr6_cox_hap1_77|geneid_v1.2_predicted_cDNA_77|441_NN ATGACCATCCTGCAGGCCCCGACCCCGGCCCCCTCCACCATCCCGGGACCCCGGCGGGGC TCCGGTCCTGAGATCTTCACCTTCGACCCTCTCCCGGAGCCCGCAGCGGCCCCTGCCGGG CGCCCCAGCGCCTCTCGCGGGCACCGAAAGCGCAGCCGCAGGGTTCTCTACCCTCGAGTG GTCCGGCGCCAGCTGCCAGTCGAGGAACCGAACCCAGCCAAAAGGCTTCTCTTTCTGCTG CTCACCATCGTCTTCTGCCAGATCCTGATGGCTGAAGAGGGTGTGCCGGCGCCCCTGCCT CCAGAGGACGCCCCTAACGCCGCATCCCTGGCGCCCACCCCTGTGTCCCCCGTCCTCGAG CCCTTTAATCTGACTTCGGAGCCCTCGGACTACGCTCTGGACCTCAGCACTTTCCTCCAG CAACACCCGGCCGCCTTCTAA >chr6_cox_hap1_77|geneid_v1.2_predicted_protein_77|147_AA MTILQAPTPAPSTIPGPRRGSGPEIFTFDPLPEPAAAPAGRPSASRGHRKRSRRVLYPRV VRRQLPVEEPNPAKRLLFLLLTIVFCQILMAEEGVPAPLPPEDAPNAASLAPTPVSPVLE PFNLTSEPSDYALDLSTFLQQHPAAF* # Gene 78 (Forward). 52 exons. 3436 aa. Score = 214.96 First 2176244 2176403 -0.09 + 0 1 1.47 0.27 11.05 0.00 AA 1: 54 chr6_cox_hap1_78 Internal 2212866 2212962 -0.48 + 2 2 3.49 1.86 4.66 0.00 AA 54: 86 chr6_cox_hap1_78 Internal 2245311 2245457 0.15 + 1 2 3.59 2.92 3.12 0.00 AA 86:135 chr6_cox_hap1_78 Internal 2274666 2274691 -0.58 + 1 1 3.90 2.02 3.56 0.00 AA 135:144 chr6_cox_hap1_78 Internal 2305290 2305392 0.73 + 2 2 1.46 2.11 8.97 0.00 AA 144:178 chr6_cox_hap1_78 Internal 2305584 2305812 7.04 + 1 0 5.08 3.87 16.68 0.00 AA 178:254 chr6_cox_hap1_78 Internal 2307355 2307502 4.09 + 0 1 4.96 3.02 10.73 0.00 AA 255:304 chr6_cox_hap1_78 Internal 2307762 2307861 1.97 + 2 2 3.00 3.31 7.95 0.00 AA 304:337 chr6_cox_hap1_78 Internal 2308386 2308572 7.33 + 1 0 3.92 4.94 17.54 0.00 AA 337:399 chr6_cox_hap1_78 Internal 2308680 2308926 5.70 + 0 1 6.75 2.63 12.68 0.00 AA 400:482 chr6_cox_hap1_78 Internal 2309452 2309547 1.74 + 2 1 6.69 2.96 2.38 0.00 AA 482:514 chr6_cox_hap1_78 Internal 2309656 2309807 5.32 + 2 0 2.17 1.70 19.99 0.00 AA 514:564 chr6_cox_hap1_78 Internal 2310890 2311055 -1.72 + 0 1 -1.17 2.70 5.89 0.00 AA 565:620 chr6_cox_hap1_78 Internal 2311788 2311898 2.02 + 2 1 5.38 2.64 5.52 0.00 AA 620:657 chr6_cox_hap1_78 Internal 2313005 2313249 6.04 + 2 0 4.07 4.59 14.61 0.00 AA 657:738 chr6_cox_hap1_78 Internal 2313398 2313525 2.16 + 0 2 2.68 3.65 8.39 0.00 AA 739:781 chr6_cox_hap1_78 Internal 2313763 2313981 10.35 + 1 2 4.38 2.09 28.66 0.00 AA 781:854 chr6_cox_hap1_78 Internal 2314457 2314691 11.53 + 1 0 3.78 2.40 32.06 0.00 AA 854:932 chr6_cox_hap1_78 Internal 2315272 2315421 4.22 + 0 0 3.33 1.37 16.01 0.00 AA 933:982 chr6_cox_hap1_78 Internal 2315573 2315674 1.14 + 0 0 4.07 0.20 8.95 0.00 AA 983:1016 chr6_cox_hap1_78 Internal 2325393 2325532 -0.42 + 0 2 3.09 3.89 0.96 0.00 AA 1017:1063 chr6_cox_hap1_78 Internal 2325794 2325898 1.10 + 1 2 4.76 2.80 3.90 0.00 AA 1063:1098 chr6_cox_hap1_78 Internal 2326291 2326422 2.02 + 1 2 5.23 2.70 5.65 0.00 AA 1098:1142 chr6_cox_hap1_78 Internal 2327024 2327120 1.44 + 1 0 1.68 4.78 6.41 0.00 AA 1142:1174 chr6_cox_hap1_78 Internal 2327212 2327300 2.09 + 0 2 6.87 3.87 1.61 0.00 AA 1175:1204 chr6_cox_hap1_78 Internal 2327517 2327628 0.46 + 1 0 3.26 3.65 3.28 0.00 AA 1204:1241 chr6_cox_hap1_78 Internal 2327790 2327858 1.89 + 0 0 5.63 4.60 1.88 0.00 AA 1242:1264 chr6_cox_hap1_78 Internal 2328373 2328505 4.42 + 0 1 4.70 2.70 12.44 0.00 AA 1265:1309 chr6_cox_hap1_78 Internal 2328687 2328817 2.28 + 2 0 1.45 0.59 15.15 0.00 AA 1309:1352 chr6_cox_hap1_78 Internal 2329668 2329746 1.60 + 0 1 3.02 3.51 6.72 0.00 AA 1353:1379 chr6_cox_hap1_78 Internal 2330170 2330279 5.69 + 2 0 2.80 -0.19 22.81 0.00 AA 1379:1415 chr6_cox_hap1_78 Internal 2331289 2331396 0.65 + 0 0 1.60 0.98 10.26 0.00 AA 1416:1451 chr6_cox_hap1_78 Internal 2331515 2331596 0.85 + 0 1 4.02 5.91 -0.27 0.00 AA 1452:1479 chr6_cox_hap1_78 Internal 2331714 2331814 0.01 + 2 0 3.13 2.44 4.18 0.00 AA 1479:1512 chr6_cox_hap1_78 Internal 2332105 2332226 3.22 + 0 2 6.81 2.01 7.32 0.00 AA 1513:1553 chr6_cox_hap1_78 Internal 2336879 2336960 3.45 + 1 0 4.28 4.03 8.65 0.00 AA 1553:1580 chr6_cox_hap1_78 Internal 2337276 2337352 0.76 + 0 2 3.50 3.49 3.92 0.00 AA 1581:1606 chr6_cox_hap1_78 Internal 2337441 2337516 -0.54 + 1 0 3.08 2.97 2.07 0.00 AA 1606:1631 chr6_cox_hap1_78 Internal 2338327 2338452 2.71 + 0 0 5.93 4.42 3.76 0.00 AA 1632:1673 chr6_cox_hap1_78 Internal 2338661 2338765 2.72 + 0 0 5.28 3.65 5.89 0.00 AA 1674:1708 chr6_cox_hap1_78 Internal 2338917 2338985 2.62 + 0 0 5.62 4.51 3.86 0.00 AA 1709:1731 chr6_cox_hap1_78 Internal 2339109 2339187 -0.34 + 0 1 5.16 2.64 -0.04 0.00 AA 1732:1758 chr6_cox_hap1_78 Internal 2339315 2339442 3.73 + 2 0 4.36 4.60 8.39 0.00 AA 1758:1800 chr6_cox_hap1_78 Internal 2339564 2339716 3.60 + 0 0 4.27 3.28 10.17 0.00 AA 1801:1851 chr6_cox_hap1_78 Internal 2341485 2341596 2.96 + 0 1 1.29 4.21 11.65 0.00 AA 1852:1889 chr6_cox_hap1_78 Internal 2341755 2341930 2.12 + 2 0 3.65 1.63 9.86 0.00 AA 1889:1947 chr6_cox_hap1_78 Internal 2342091 2342219 3.45 + 0 0 6.30 4.74 4.55 0.00 AA 1948:1990 chr6_cox_hap1_78 Internal 2347326 2347347 -1.37 + 0 1 5.46 0.53 0.08 0.00 AA 1991:1998 chr6_cox_hap1_78 Internal 2353396 2353496 2.29 + 2 0 4.14 3.89 6.19 0.00 AA 1998:2031 chr6_cox_hap1_78 Internal 2354264 2354378 -0.40 + 0 1 4.38 1.84 2.17 0.00 AA 2032:2070 chr6_cox_hap1_78 Internal 2364735 2368687 89.99 + 2 0 7.18 3.32 221.73 0.00 AA 2070:3387 chr6_cox_hap1_78 Terminal 2369159 2369305 1.23 + 0 0 4.11 0.00 9.43 0.00 AA 3388:3436 chr6_cox_hap1_78 >chr6_cox_hap1_78|geneid_v1.2_predicted_cDNA_78|10308_NN ATGGCTCAGTGCAGTGGTGCGATCATGTCTCAGTGCAGTGGTGCGATTATGGCTCAGTGC AGTGGTGCGATCATGGCTCAGTGCGGTGGTGCGATCATGGCTCAGTGCAGTGGTGCAATT ATGTCTCAGTGCAGTTGTGCGATCATGTTTCAGTGCAGTGGCCCAGTTGGGATCAGGAAC ATCAACTCATATCACATGAGCAGAACTTGTTCATTTGGGGACATCCCCAATAATGCCAAA ATCTATGCTCCAGATGAAGTCCTGTATCCCAGCGATGGGGATCAAGATTCAGACTTAAGG ACACCCTACCTGGACCTTGGCAAGGAGATTTTTACAGTGGGAATCTGGTCCAGCCTCTCT CTGGCCCCAGGCCTCTACTGTCCACCTTTTACAAATGCCACATGGCCAGCTGCTCCTGGT GAGAATGGAGCCAAGTGCCGCTATGCCCTGGGCATGCAGGACCGGACCATCCCAGACAGT GACATCTCTGCTTCCAGCTCCTGGTCAGATTCCACTGCCGCCCGCCACAGCAGGTTGGAG AGCAGTGACGGGGATGGGGCCTGGTGCCCCGCAGGGTCGGTGTTTCCCAAGGAGGAGGAG TACTTGCAGGTGGATCTACAACGACTGCACCTGGTGGCTCTGGTGGGCACCCAGGGACGG CATGCCGGGGGCCTGGGCAAGGAGTTCTCCCGGAGCTACCGGCTGCGTTACTCCCGGGAT GGTCGCCGCTGGATGGGCTGGAAGGACCGCTGGGGTCAGGAGGTGATCTCAGGCAATGAG GACCCTGAGGGAGTGGTGCTGAAGGACCTTGGGCCCCCCATGGTTGCCCGACTGGTTCGC TTCTACCCCCGGGCTGACCGGGTCATGAGCGTCTGTCTGCGGGTAGAGCTCTATGGCTGC CTCTGGAGGGATGGACTCCTGTCTTACACCGCCCCTGTGGGGCAGACAATGTATTTATCT GAGGCCGTGTACCTCAACGACTCCACCTATGACGGACATACCGTGGGCGGACTGCAGTAT GGGGGTCTGGGCCAGCTGGCAGATGGTGTGGTGGGGCTGGATGACTTTAGGAAGAGTCAG GAGCTGCGGGTCTGGCCAGGCTATGACTATGTGGGATGGAGCAACCACAGCTTCTCCAGT GGCTATGTGGAGATGGAGTTTGAGTTTGACCGGCTGAGGGCCTTCCAGGCTATGCAGGTC CACTGTAACAACATGCACACGCTGGGAGCCCGTCTGCCTGGCGGGGTGGAATGTCGCTTC CGGCGTGGCCCTGCCATGGCCTGGGAGGGGGAGCCCATGCGCCACAACCTAGGGGGCAAC CTGGGGGACCCCAGAGCCCGGGCTGTCTCAGTGCCCCTTGGCGGCCGTGTGGCTCGCTTT CTGCAGTGCCGCTTCCTCTTTGCGGGGCCCTGGTTACTCTTCAGCGAAATCTCCTTCATC TCTGATGTGGTGAACAATTCCTCTCCGGCACTGGGAGGCACCTTCCCGCCAGCCCCCTGG TGGCCGCCTGGCCCACCTCCCACCAACTTCAGCAGCTTGGAGCTGGAGCCCAGAGGCCAG CAGCCCGTGGCCAAGGCCGAGGGGAGCCCGACCGCCATCCTCATCGGCTGCCTGGTGGCC ATCATCCTGCTCCTGCTGCTCATCATTGCCCTCATGCTCTGGCGGCTGCACTGGCGCAGG CTCCTCAGCAAGGCTGAACGGAGGGTGTTGGAAGAGGAGCTGACGGTTCACCTCTCTGTC CCTGGGGACACTATCCTCATCAACAACCGCCCAGGTCCTAGAGAGCCACCCCCGTACCAG GAGCCCCGGCCTCGTGGGAATCCGCCCCACTCTGCTCCCTGTGTCCCCAATGGCTCTGCG TTGCTGCTCTCCAATCCAGCCTACCGCCTCCTTCTGGCCACTTACGCCCGTCCCCCTCGA GGCCCGGGCCCCCCCACACCCGCCTGGGCCAAACCCACCAACACCCAGGCCTACAGTGGG GACTATATGGAGCCTGAGAAGCCAGGCGCCCCGCTTCTGCCCCCACCTCCCCAGAACAGC GTCCCCCATTATGCCGAGGCTGACATTGTTACCCTGCAGGGCGTCACCGGGGGCAACACC TATGCTGTGCCTGCACTGCCCCCAGGGGCAGTCGGGGATGGGCCCCCCAGAGTGGATTTC CCTCGATCTCGACTCCGCTTCAAGGAGAAGCTTGGCGAGGGCCAGTTTGGGGAGGTGCAC CTGTGTGAGGTCGACAGCCCTCAAGATCTGGTCAGTCTTGATTTCCCCCTTAATGTGCGT AAGGGACACCCTTTGCTGGTAGCTGTCAAGATCTTACGGCCAGATGCCACCAAGAATGCC AGGAATGATTTCCTGAAAGAGGTGAAGATCATGTCGAGGCTCAAGGACCCAAACATCATT CGGCTGCTGGGCGTGTGTGTGCAGGACGACCCCCTCTGCATGATTACTGACTACATGGAG AACGGCGACCTCAACCAGTTCCTCAGTGCCCACCAGCTGGAGGACAAGGCAGCCGAGGGG GCCCCTGGGGACGGGCAGGCTGCGCAGGGGCCCACCATCAGCTACCCAATGCTGCTGCAT GTGGCAGCCCAGATCGCCTCCGGCATGCGCTATCTGGCCACACTCAACTTTGTACATCGG GACCTGGCCACGCGGAACTGCCTAGTTGGGGAAAATTTCACCATCAAAATCGCAGACTTT GGCATGAGCCGGAACCTCTATGCTGGGGACTATTACCGTGTGCAGGGCCGGGCAGTGCTG CCCATCCGCTGGATGGCCTGGGAGTGCATCCTCATGGGGAAGTTCACGACTGCGAGTGAC GTGTGGGCCTTTGGTGTGACCCTGTGGGAGGTGCTGATGCTCTGTAGGGCCCAGCCCTTT GGGCAGCTCACCGACGAGCAGGTCATCGAGAACGCGGGGGAGTTCTTCCGGGACCAGGGC CGGCAGGGCCTATATGAGCTGATGCTTCGGTGCTGGAGCCGGGAGTCTGAGCAGCGACCA CCCTTTTCCCAGCTGCATCGGTTCCTGGCAGAGGATGCACTCAACACGGTGATGGAGAGC ACCCCTTCAAGGGGACTGAACCGAGTACACCTACAATGCAGGAATCTGCAGGAATTCTTA GGGGGCCTGAGCCCTGGGGTATTGGACCGATTGTATGGGCACCCTGCCACATGTCTGGCT GTCTTCAGGGAGCTCCCATCCTTGGCTAAGAACTGGGTGATGCGGATGCTCTTTCTGGAG CAGCCTTTGCCACAGGCTGCTGTAGCTCTGTGGGTAAAGAAGGAATTCAGCAAGGCTCAG GAGGAAAGTACAGGGCTGCTGAGCGGCCTCCGGATCTGGCACACACAGCTGCTCCCAGGC GGGCTCCAGGGCCTCATCCTCAACCCCATTTTCCGCCAGAACCTCCGCATTGCCCTTCTG GGTGGGGGGAAGGCCTGGTCTGATGACACAAGTCAGCTGGGACCAGACAAGCATGCCCGG GACGTTCCCTCCCTTGACAAGTACGCCGAGGAGCGATGGGAGGTGGTCTTGCACTTCATG GTGGGCTCCCCCAGTGCAGCTGTCAGCCAGGACTTGGCTCAGCTCCTCAGCCAGGCTGGG CTCATGAAGAGTACTGAACCTGGAGAGCCGCCCTGCATTACTTCCGCTGGCTTCCAGTTC CTGTTGCTGGACACCCCGGCTCAGCTCTGGTACTTTATGTTGCAGTATTTGCAGACAGCC CAGAGCCGGGGCATGGACCTGGTAGAGATTCTCTCCTTCCTCTTCCAGCTCAGCTTCTCT ACTCTGGGCAAGAGGAAATCTCGGCGTTACTACCCCACACGCCTGGCCATCAATCTCTCA TCAGGTGTCTCTGGAGCTGGGGGCACTGTGCATCAGCCAGGTTTCATTGTCGTGGAAACC AATTACCGACTGTATGCCTACACGGAGTCGGAGCTGCAGATTGCCCTCATTGCCCTCTTC TCTGAGATGCTCTATCGGTTCCCCAACATGGTGGTGGCGCAGGTGACCCGGGAGAGTGTG CAGCAGGCAATCGCCAGTGGCATCACAGCCCAGCAGACACCTGTGCTGCCCCCCACCATC ACCGACCAGATCCGGCTCTGGGAGCTGGAAAGGGACAGACTCCGGTTCACTGAGGGTGTC CTGTATAACCAGTTCCTGTCGCAAGTGGACTTTGAGCTGCTGCTGGCCCACGCGCGGGAG CTGGGCGTGCTCGTGTTCGAGAACTCGGCCAAGCGGCTCATGGTGTCGGAGCCCCATGGA TCTCCCATCTCCCGGAGGAACCGTGAAGCCAAACAGAAGCGCCTGCGAGAGAAGCAGGCG ACTCTGGAGGCTGAGATAGCAGGGGAGAGCAAGTCACCTGCAGAATCCATTAAGGCCTGG AGGCCTAAGGAGTTAGTATTGTATGAAATCCCTACGAAACCCGGTGAAAAGAAAGATGTC TCTGGGCCCCTGCCTCCTGCATACAGCCCCCGATATGTTGAGGCTGCCTGGTACCCGTGG TGGGTACGAGAGGGCTTCTTCAAACCAGAATATCAGGCCCGGCTGCCCCAAGCTACAGGG GAGACCTTTTCCATGTGTATCCCACCTCCCAATGTCACTGGCTCCCTGCACATTGGCCAC GCACTCACGGTGGCCATACAGGATGCCCTCGTGCGCTGCCGTTCTGGGGATGTGATAGAA TACCTGCTGAAGAACCAGTGGTTTGTCCGCTGCCAGGAAATGGGGGCCCGAGCTGCCAAG GCTGTGGAGTCGGGGGCCCTGGAGCTCAGTCCCTCCTTCCACCAGAAGAACTGGCAGCAC TGGTTTTCCCATATTGGGGACTGGTGTGTCTCCCGGCAGCTGTGGTGGGGCCATCAGATT CCAGCCTACCTGGTTGTAGAGGACCATGCGCAGACCCCAGACCTTGCTCGTTTCTACCCC CTGTCACTTTTGGAAACGGGCAGCGACCTTCTGCTGTTCTGGGTGGGCCGCATGGTCATG TTGGGGACCCAGCTCACAGGGCAGCTGCCCTTCAGCAAGGTGCTTCTTCATCCCATGGTT CGGGACAGGCAGGGCCGGAAGATGAGCAAGTCCCTGGGGAATGTGCTGGACCCAAGAGAC ATCATCAGTGGGGTGGAGATGCAGGTGCTGCAGGAAAAGCTGAGAAGCGGAAATTTGGAC CCTGCAGAGCTGGCCATTGTGGCTGCAGCACAGAAAAAGGACTTTCCTCACGGGATCCCT GAGTGTGGGACAGATGCCCTGAGATTCACACTCTGCTCCCATGGAGTTCAGGCGGGCGAC TTGCACCTGTCAGTCTCTGAGGTCCAGAGCTGCCGACATTTCTGCAACAAGATCTGGAAT GCTCTTCGCTTTATCCTCAATGCTTTAGGGGAGAAATTTGTGCCACAGCCTGCTGAGGAG CTGTCTCCCTCCTCCCCGATGGATGCCTGGATCCTGAGCCGCCTTGCCCTGGCTGCCCAG GAGTGTGAGCGGGGCTTCCTCACCCGAGAGCTCTCGCTCGTCACTCATGCCCTGCACCAC TTCTGGCTTCACAACCTCTGTGACGTCTACCTGGAGCACTGGCGCCAGCCAGAGCTGGAG CGGCGCTTCTCCCGGGTCCAAGAGGTCGTGCAGGTGCTAAGGGCTCTCCGAGCCACGTAC CAGCTCACCAAAGCCCGGCCCCGAGTGCTGCTGCAGAGCTCAGAGCCTGGGGACCAGGGC CTCTTCGAGGCCTTCTTGGAGCCCCTGGGCACCCTGGGCTACTGTGGGGCTGTGGGCCTG TTACCCCCAGGCGCAGCAGCTCCCTCCGGCTGGGCCCAGGCTCCACTCAGTGACACGGCT CAAGTCTACATGGAGCTGCAGGGCCTGGTGGACCCGCAGATCCAGCTACCTCTGTTAGCC GCCCGAAGGTACAAGTTGCAGAAGCAGCTTGATAGCCTCACAGCCAGGACCCCATCAGAA GGGGAGGCAGGGACTCAGAGGCAACAAAAGGTGTTCCAAAGATCTCAATTTGGTCCGAAG CCCCAGAAGGACTCTGTCTCAGACTGGGCCATTGTGTTGATCACTCTCACTTTGGTGGCA GCAATTGTCAGCCTAATGTACGGTATCAAGAAGGCCTGCCAGTTCCGGAGGGAGATGAGT CTGGGGTGTGGCTGTGGCTCTGTGACCCCTTACAGCAGCCACCATGAGGGGGAGGCTGCC AGCCAGCGCTACTCTTGTCAAATGAAAGGTGCTACTACATTCCAAGAATATCAGAAAACT GGGGAACTCTCAACATCCGATCACATATTTCCCCTCACTCCAGGCCTTGTTTATAGTATC CCTTTTGATCACATTGTTCTGCATTCAGGACAAAGACCTCCAGAGCTCCCTAAATCTACA GAAATCCATGAGCAAAAACGCCACTGCAACACCACACGCCATTCTAAGCCAACTGACAAG CCTACAGGCAACTCCAAAACTATAGACCACAAAAGCTCTACAGATAATCATGAGGCTCCT CCCACTTCTGAAGAAAACTCCAGCAACCAAGGGAAAGACCCAATGATCCGGAACCAGCGC TCTGTTGATCCTGCTGACTCCACTACCACACATAAAGAATCCGCTGGAAAAAAACATATA ACGCCAGCACCCAAGAGCAAAATAAACTGTCGTAAGTCCACAACAGGCAAATCAACGGTA ACAAGAAAATCAGATAAAACTGGAAGACCTTTGGAAAAGTCCATGAGTACTTTGGATAAG ACAAGTACCAGCTCACATAAGACTACAACTTCCTTCCACAACTCAGGCAATTCACAGACC AAGCAAAAAAGCACATCTTTTCCAGAAAAAATCACAGCAGCCTCAAAAACAACATACAAG ACCACAGGAACCCCAGAAGAGTCAGAAAAAACTGAAGATTCCAGAACAACAGTTGCCTCA GACAAGCTCCTGACAAAAACTACAAAAAACATACAAGAGACCATATCAGCCAATGAGCTC ACACAATCTCTAGCAGAGCCTACAGAACATGGAGGAAGGACAGCCAATGAGAACAACACA CCATCCCCAGCAGAGCCTACAGAAAATAGAGAAAGGACAGCCAATGAGAACACCACACTA TCCCCAGCAGAGCCTACAGAAAATAGAGAAAGGACAGCCAATGAGAACACCGCACCATTC CCAGCAGGGCCTACAGAAAATAGAGAAATGACAGCCAATGAGAATACCACACTATTCCCA GCAGAGCCTACAGAACATGGAGAAAGGACAGCCAATGAGAACACCACACCATCCCCAGCA GAGCCTACAGAACATGGAGAAAGGACAGCCAATGAGAACACTACACCATCCCCAGCAGAG CCTACAGAACATGGAGAAAGGACCCCATTTGCCAATGACAAAACCACATCATCCTCAGCA GAGTCTACAGAACATGGAGAAAGGACCCCACTGGCCAACGAGAACACCACACCATCCCCA GCAGAGCCTACAGAAAATAGAGAAAGGACAGCCAATGAGAACACCACACCATCCCCAGCA GGGCCTACAGAAAACAGAGAAACGACAGCCAACGAGAAGACCACACTATCCCCAGTAGAG CCTACAGAAAATAGAGAAACAACAGCCAATGAGAAGACCACACCATCCCCAGCAGAGCCT ACAGAAAATGGACAAAGGACCCCATTTGCCAATGAGAAAACCACATCATCCTCAGCAGAG CCTACAGAACACGGAGAAAGGACCCCACTGGCCAATGAGAACACCACACCATCCCCAGCA GAGCCTACAGAAAATAGAGAAAGGACAGCCAATGAGAAGACCACACCATCCCCAGCAGAG CCTACAGAAAATGGAGACAGGACTCCTTTGGCCAATGAGAAGACCACGCCATCTCTAGCA GAGCCTACAGAAAATGGACAAAGGACCCCATTTGCCAATGAGAAGACCACATCATCCTCA GCAGAGCCTACAGAACACGAAGAAAGGACTCCACTGGCCAATGAGAACACCACACCATCC CCGGCAGAGCCTACAGAAAATAGAGAAAGGACAGCCAATGAGAACACCACACCATCCCCA GCAGGGCCTACAGAAAATAGAGAAATGACAGCCAACGAGAAGACCACACTATTCCCAGCA GAGCCTACAGAAAATAGAGAAAGGACAGCCAATGAGAAGACCACATCATCCCCAGCAGAG CCTACAGAAAATGGACAAAGGACCCCATTTGCCAATGAGAAAACCACATCATCCTCAGCA GAGCCTACAGAACACGGAGAAAGGACCCCACTGGCCAATGAGAACACCACACTATCCCCA GCAGAGCCTACAGAAAATAGAGAAAGGACAGCCAATGAGAAGACCACACCATTCCCAGCA GAGCCTACAGAAAATAGAGAAAGGACAGCCAATGAGAACACCACACCATCCCCAGCACAG CCTACAGAAAATGGAGACAGGACTCCATTGGCCAATGAGAAGACCACACCATCTCTAGCA GAGCCTACAGAAAATGGAAAAAGGACCCCATTTGCCAATGAGAAGACCACATCATCCTCA GCAGAGCCTACAGAACACGCAGAAAGGACTCCACTGGCCAATGAGAACACCACATCATCC CCAGCAGAGCCTACAGAAAATAGAGAAAGGACAGCCAATGAGAAGACCACACAATTCCCA GCAGAGCCTACAGAAAATAGAGAAAGCACAGCCAATGAGAAGACCACACCATTCCCAGCA GAGCCTACAGAAAATAGAGAATGGACAGCCAATGAGAACACCACACTATCCCCAGCAGAG CCTACAGAACATGAAGAAATGACCCCATTGGCCAATGAGAAGACCACACTATCCCCAGCA GAGCCTACAGAAAATGGAGAAAGGACCCCATTTACCAATGAGAAGACCACACCATCCTCA GCAGAGCCTACAGAACATGGAGAAAGGACCCCACTGGCCAATGAGATCACCACACCATCC CGAGCAGAGCCTACAGAACATGGAGAAAGGATAGCCAATGAGAAGGCCACACCATCCCCA GCAAAGCCTACAGAACATGGAGAAACGACAGTCAATGAGGACACCACACCATCCTCAGCA GAGCCTACAGAAAATGGAGAAAGGACCCCACTGGCCAATGAGAACACCACAACATCCCCA ACAGAGTCTACAGAACATGGAGAAAGGACAGCCAATGAGAAGACCACACCATCCCCAGCA GAGCCTACAGAACATGGAGAAAGGACACCATCAGCCAATGAGAAGACCATACCATCTCCA GCAAAGCCTACAGAACACGAAGAAATGACCCCATCAGCCAATGAGAACACCACACCATCC CCAGTAAAGCCTACAGAACATGGAGAAAAGACTACATTGGCCAATGAGAAGATCACACTA TCCCCAGAAGGGCCTACAGAACATGGAGCAAAAACTACGTCGGCCAATGAGAAGATCACA CCATCCCTAGCAAAGCCTACAGAACATGGAGAAAGGACCACATCACCCAATGACAAGATC ACCTCATCTGCAGCAGAGTCTACAGAACATAGAGATAGGGCTACATCAGCCAATGTGATC ACACCAGCCCCAGCAGAGCCTATAAAACATGCAAAAAGGACCACATTGGCCCATGAGAAG ATGACACAAGTCACAGAAAAGTCCACAGAACACCCAGAAAAGACCACGTCAACCACAGAG AAAACCACAAGAACCCCAGAAAAGCCTACGCTATACTCAGAGAAGACCATATGCACCAAA GGGAAAAACACACCAGTCCCAGAAAAGCCTACAGAAAACCTGGGGAACACCACACTGACC ACTGAGACCATAAAAGCCCCAGTAAAGTCCACAGAAAACCCAGAAAAAACAGCAGCAGTC ACAAAGACTATAAAACCTTCAGTCAAGGTCACAGGAGACAAATCTCTCACTACTACCTCT TCTCATCTAAATAAAACTGAAGTTACTCATCAGGTGCCCACTGGTTCTTTCACCCTCATT ACATCTAGAACGAAGCTGAGTTCTATCACATCAGAAGCCACAGGAAACAAGAGCCATCCA TACCTCAATAAAGATGGCTCACAGAAAGGTATCCACGCTGGACAGATGGGAGAGAATGAT TCATTCCCTGCATGGGCCATAGTTATTGTGGTCCTGGTGGCTGTGATTCTCCTCCTGGTG TTCCTTGGCCTGATCTTCTTGGTCTCCTATATGATGCGGACACGCCGCACACTAACCCAG AACACCCAGTACAATGATGCAGAGGATGAGGGTGGCCCCAATTCCTACCCGGTCTACCTG ATGGAGCAGCAGAATCTTGGCATGGGCCAGATCCCTTCCCCACGGTGA >chr6_cox_hap1_78|geneid_v1.2_predicted_protein_78|3436_AA MAQCSGAIMSQCSGAIMAQCSGAIMAQCGGAIMAQCSGAIMSQCSCAIMFQCSGPVGIRN INSYHMSRTCSFGDIPNNAKIYAPDEVLYPSDGDQDSDLRTPYLDLGKEIFTVGIWSSLS LAPGLYCPPFTNATWPAAPGENGAKCRYALGMQDRTIPDSDISASSSWSDSTAARHSRLE SSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRLRYSRD GRRWMGWKDRWGQEVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMSVCLRVELYGC LWRDGLLSYTAPVGQTMYLSEAVYLNDSTYDGHTVGGLQYGGLGQLADGVVGLDDFRKSQ ELRVWPGYDYVGWSNHSFSSGYVEMEFEFDRLRAFQAMQVHCNNMHTLGARLPGGVECRF RRGPAMAWEGEPMRHNLGGNLGDPRARAVSVPLGGRVARFLQCRFLFAGPWLLFSEISFI SDVVNNSSPALGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTAILIGCLVA IILLLLLIIALMLWRLHWRRLLSKAERRVLEEELTVHLSVPGDTILINNRPGPREPPPYQ EPRPRGNPPHSAPCVPNGSALLLSNPAYRLLLATYARPPRGPGPPTPAWAKPTNTQAYSG DYMEPEKPGAPLLPPPPQNSVPHYAEADIVTLQGVTGGNTYAVPALPPGAVGDGPPRVDF PRSRLRFKEKLGEGQFGEVHLCEVDSPQDLVSLDFPLNVRKGHPLLVAVKILRPDATKNA RNDFLKEVKIMSRLKDPNIIRLLGVCVQDDPLCMITDYMENGDLNQFLSAHQLEDKAAEG APGDGQAAQGPTISYPMLLHVAAQIASGMRYLATLNFVHRDLATRNCLVGENFTIKIADF GMSRNLYAGDYYRVQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEVLMLCRAQPF GQLTDEQVIENAGEFFRDQGRQGLYELMLRCWSRESEQRPPFSQLHRFLAEDALNTVMES TPSRGLNRVHLQCRNLQEFLGGLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRMLFLE QPLPQAAVALWVKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPIFRQNLRIALL GGGKAWSDDTSQLGPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLLSQAG LMKSTEPGEPPCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQLSFS TLGKRKSRRYYPTRLAINLSSGVSGAGGTVHQPGFIVVETNYRLYAYTESELQIALIALF SEMLYRFPNMVVAQVTRESVQQAIASGITAQQTPVLPPTITDQIRLWELERDRLRFTEGV LYNQFLSQVDFELLLAHARELGVLVFENSAKRLMVSEPHGSPISRRNREAKQKRLREKQA TLEAEIAGESKSPAESIKAWRPKELVLYEIPTKPGEKKDVSGPLPPAYSPRYVEAAWYPW WVREGFFKPEYQARLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALVRCRSGDVIE YLLKNQWFVRCQEMGARAAKAVESGALELSPSFHQKNWQHWFSHIGDWCVSRQLWWGHQI PAYLVVEDHAQTPDLARFYPLSLLETGSDLLLFWVGRMVMLGTQLTGQLPFSKVLLHPMV RDRQGRKMSKSLGNVLDPRDIISGVEMQVLQEKLRSGNLDPAELAIVAAAQKKDFPHGIP ECGTDALRFTLCSHGVQAGDLHLSVSEVQSCRHFCNKIWNALRFILNALGEKFVPQPAEE LSPSSPMDAWILSRLALAAQECERGFLTRELSLVTHALHHFWLHNLCDVYLEHWRQPELE RRFSRVQEVVQVLRALRATYQLTKARPRVLLQSSEPGDQGLFEAFLEPLGTLGYCGAVGL LPPGAAAPSGWAQAPLSDTAQVYMELQGLVDPQIQLPLLAARRYKLQKQLDSLTARTPSE GEAGTQRQQKVFQRSQFGPKPQKDSVSDWAIVLITLTLVAAIVSLMYGIKKACQFRREMS LGCGCGSVTPYSSHHEGEAASQRYSCQMKGATTFQEYQKTGELSTSDHIFPLTPGLVYSI PFDHIVLHSGQRPPELPKSTEIHEQKRHCNTTRHSKPTDKPTGNSKTIDHKSSTDNHEAP PTSEENSSNQGKDPMIRNQRSVDPADSTTTHKESAGKKHITPAPKSKINCRKSTTGKSTV TRKSDKTGRPLEKSMSTLDKTSTSSHKTTTSFHNSGNSQTKQKSTSFPEKITAASKTTYK TTGTPEESEKTEDSRTTVASDKLLTKTTKNIQETISANELTQSLAEPTEHGGRTANENNT PSPAEPTENRERTANENTTLSPAEPTENRERTANENTAPFPAGPTENREMTANENTTLFP AEPTEHGERTANENTTPSPAEPTEHGERTANENTTPSPAEPTEHGERTPFANDKTTSSSA ESTEHGERTPLANENTTPSPAEPTENRERTANENTTPSPAGPTENRETTANEKTTLSPVE PTENRETTANEKTTPSPAEPTENGQRTPFANEKTTSSSAEPTEHGERTPLANENTTPSPA EPTENRERTANEKTTPSPAEPTENGDRTPLANEKTTPSLAEPTENGQRTPFANEKTTSSS AEPTEHEERTPLANENTTPSPAEPTENRERTANENTTPSPAGPTENREMTANEKTTLFPA EPTENRERTANEKTTSSPAEPTENGQRTPFANEKTTSSSAEPTEHGERTPLANENTTLSP AEPTENRERTANEKTTPFPAEPTENRERTANENTTPSPAQPTENGDRTPLANEKTTPSLA EPTENGKRTPFANEKTTSSSAEPTEHAERTPLANENTTSSPAEPTENRERTANEKTTQFP AEPTENRESTANEKTTPFPAEPTENREWTANENTTLSPAEPTEHEEMTPLANEKTTLSPA EPTENGERTPFTNEKTTPSSAEPTEHGERTPLANEITTPSRAEPTEHGERIANEKATPSP AKPTEHGETTVNEDTTPSSAEPTENGERTPLANENTTTSPTESTEHGERTANEKTTPSPA EPTEHGERTPSANEKTIPSPAKPTEHEEMTPSANENTTPSPVKPTEHGEKTTLANEKITL SPEGPTEHGAKTTSANEKITPSLAKPTEHGERTTSPNDKITSSAAESTEHRDRATSANVI TPAPAEPIKHAKRTTLAHEKMTQVTEKSTEHPEKTTSTTEKTTRTPEKPTLYSEKTICTK GKNTPVPEKPTENLGNTTLTTETIKAPVKSTENPEKTAAVTKTIKPSVKVTGDKSLTTTS SHLNKTEVTHQVPTGSFTLITSRTKLSSITSEATGNKSHPYLNKDGSQKGIHAGQMGEND SFPAWAIVIVVLVAVILLLVFLGLIFLVSYMMRTRRTLTQNTQYNDAEDEGGPNSYPVYL MEQQNLGMGQIPSPR* # Gene 79 (Reverse). 5 exons. 801 aa. Score = 34.36 Terminal 2378500 2378616 0.13 - 0 0 0.00 4.66 5.84 0.00 AA 763:801 chr6_cox_hap1_79 Internal 2380888 2381295 1.07 - 0 0 1.68 -4.80 19.86 0.00 AA 627:762 chr6_cox_hap1_79 Internal 2381917 2382398 6.97 - 2 0 0.82 -2.14 31.90 0.00 AA 466:626 chr6_cox_hap1_79 Internal 2391165 2391198 0.21 - 0 1 5.10 4.14 0.54 0.00 AA 455:466 chr6_cox_hap1_79 First 2402456 2403817 25.99 - 0 0 0.31 -0.35 77.54 0.00 AA 1:454 chr6_cox_hap1_79 >chr6_cox_hap1_79|geneid_v1.2_predicted_cDNA_79|2403_NN ATGAGGAAGATTTCCCACGGCACCAGGGACCCACCAGGCTTCGCCTCACTCACTGCAGTA GATGCACTATGGGAAGTTGTGTGCATTCCAGTCAGAGCTGCTGTTCCAGAGCCTGCAGAG GTCACACTGGACCCAGAGTTGGTGGCTGTGTTGGCCCCACTGGAGGTTGTGCTGGACTCA GAATTGGTGGCAGTGCTGGCCCCACTGGACACTGTGCTGGACTCAGAGTTGGTGGCTGTG CTGGCCCCACTGGAGGTCGTGCTGGACTCAGAGGTGGTGGCTGTGCTGGCCCCACTGGAC ACTGTGCTGGACTCAGAGTTGGTGGCTGTGCTGGTCCCACTGGAGGTCGTGCTGGACCCA GAGTTGGTGGCTGTGCTGGCCCCACTGGAGGTTGTGCTGGACTCAGAGTTGGTGGCTGTG CTGGCCCCACTGGAGGTCGTGCTGGACTCAGAGTTGGTGGCTGTGCTGGCCCCACTGGAG GTTGTGCTGGAGTCAGAGTTGGTGGCTGTGTTGGCCCCACTGGAGGTTGTACTGGACTCA GAGTTGGTGGCTGTGTTGGCCCCACTGGAGGGTGTGCTGGACTCAGAATTGGTGACTGTG CTGATCCCACTGGACACTGTGCTGGACTCAGAGTTGGTGGCTGTGCCGGCCCCACTGGAG GTCGTGCTGGACTCAGAGTTGGTGGCTGTGCCGGCCCCACTGGAGGGTGTGCTGGACTCA GAGTTGGTGGCTGTGCTGGCCCCACTGGAGGTCGTGCTGGACTCAGAGTTGGTGGCTGTG CCAGCCCCATTGGAGGTCGTTCTGGACTCAGAGTTGGTGGCTGTGCTGGCCCCACTGGAG GTTGTGCTGGACTCAGAGTTGGTGGCAGTGCTGGCCCTACTGGACACTGTGCTGGACTCA GAGTTGGTGGCTGTGCTGGCCCCACTGGAGGTTGTGCTGGACTCAGAGTTGGTGGCTGTG CTGGCCTCACTGGAGGTTGTGCTGGAGTCAGAGTTGGTGGCTGTGCTAGCCCCACTGGAG GTTGTGCTGGAGTCAGAGTTGGTGGCTGTGCTGGCCCCACTGGAGGGTGTGCTGGACTCA GAGTTGGTGGCTGTGCTGGCCCCACTGGAGGTTGTGCTGGACTCAGAGTTGGTGGCTATG CTGATCCCACTGGACGCTGTGCTGAACTCAGAGTTGGTGGCTGTGCTGATCCCACTGGAG GTTGTATGGAACTCAGAGTTGGTGACTATGCTGACCCCATTGGAGGTCACGCTGGACCCT GAGATGGTGGCTGTGCTGACCCCACTGGAGGTCACACTGGACCCAGAGTTGGTGGCTGTG CTGGCTCCACTGGAGATCACACTGGATCCAGTGTTGGCAGAGGGAGGGGTCAGAGACTCT GAAATAAGAAACTCAGAAATGTCAGTGACCTTGTTGGGCACAAAAGTGGCAGAGACAGTG GTGGAGGTTGCAGTGGCCCCAGAGGCTGTGGTAGAGGCCAAGAAGGGCGATGAGGCCAAA GCGAAGGCTGTGGAGGTCACAGATGCTGCTGTGGATGGCATGGTGGCCTCAGAGCCTGTG GTGGAAGCCATGCTGCTTCCAGACCCTGAAGTGAACTCAGAGGCTGTGCTCACAGCCATG TTGCTCGTGGATATTGCAGTGGAGGCTGTGGTGGTCTCAGAGTCTGTGGAGGAGGCGGTT GTGGGCATAGATACTATTATGGAGGCACTGGGGGTCTCAGAATCTGTGAGGGAAGCCGTG GAGGTTTCAGTGGCTGTAGTGGTCTCAGATCTTGTAGTGGAGGCTGTGGTGGTCTCAGAG CCCATCATGGATAAAAATCCTGCAGTGTTCTCAGAGGTTATTTTGGAGGTTGTTGTGGGC ACAGATACTATTGTGGAGGCTGTAGCGAAGACTGTGGTGGGCACAGATGATACTGTGTGG TGTCCGGTGTTCTCAGAGCCTGTGGTAGAGGTTGTGGTGGGCACAGATGCTGTGGTGGTC TCAGCAGGTGTTGGAGGGGCTGTAGAGGGCGCAGACTCTACAGTTGTCCCAGAGGCTTTT GTGGAGATTGCAGTGGTCGCAGAGTCTGTGGTGGAGGCTGTGGGGGTCTCAGAGCCTGCG GTGATTTTAGAGGTTGTGGTGAAGACTGTGGTGGGCAGAGATGTTATCGTAGAGGTCGTG GCGGTCTTGGAAGCTGTGGTCATGGTTTTAGAGGCTGTGTTGGGAGCTGTGGAAGGTGTA GATGTTATCACAGAGAGTGTGTTGTTCTTGGGGACTGTGGCGGACACAGATGCTGTGGTG GTGTCAGACCATGTGCAGGACCAAAAAAGAAATGAGAGGCCCAAAGCAAAGAAATACCTG CAGACTGGTTTTTCAAAATGGAAGCCGTACTGTGACAGTGCCCTTCTGAATATGGAAAAG TAG >chr6_cox_hap1_79|geneid_v1.2_predicted_protein_79|801_AA MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS ELVAVLAPLDTVLDSELVAVLAPLEVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDP ELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLEVVLDS ELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDS ELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDS ELVAVLAPLEVVLDSELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDS ELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP EMVAVLTPLEVTLDPELVAVLAPLEITLDPVLAEGGVRDSEIRNSEMSVTLLGTKVAETV VEVAVAPEAVVEAKKGDEAKAKAVEVTDAAVDGMVASEPVVEAMLLPDPEVNSEAVLTAM LLVDIAVEAVVVSESVEEAVVGIDTIMEALGVSESVREAVEVSVAVVVSDLVVEAVVVSE PIMDKNPAVFSEVILEVVVGTDTIVEAVAKTVVGTDDTVWCPVFSEPVVEVVVGTDAVVV SAGVGGAVEGADSTVVPEAFVEIAVVAESVVEAVGVSEPAVILEVVVKTVVGRDVIVEVV AVLEAVVMVLEAVLGAVEGVDVITESVLFLGTVADTDAVVVSDHVQDQKRNERPKAKKYL QTGFSKWKPYCDSALLNMEK* # Gene 80 (Forward). 3 exons. 1694 aa. Score = 79.31 First 2441978 2446406 76.63 + 0 1 2.37 2.12 197.34 0.00 AA 1:1477 chr6_cox_hap1_80 Internal 2448503 2448888 2.16 + 2 0 2.48 3.50 8.94 0.00 AA 1477:1605 chr6_cox_hap1_80 Terminal 2450979 2451245 0.52 + 0 0 5.09 0.00 7.53 0.00 AA 1606:1694 chr6_cox_hap1_80 >chr6_cox_hap1_80|geneid_v1.2_predicted_cDNA_80|5082_NN ATGGCTTCTACTGCAGCCTTCACCACAGGCTCTGAGACCAACACGGCCTCTACCACAGAC TCAGGGACTACTATAGCCTCCACTGGGACCTTCACCACAGGCTCTGACACAACCACAGGC TCCACTGCAGGCTCTGAAACTATCGTGGCCTCCACCACAGTCTCTGGGACCACAACAACC TTTACTATAGCCTCCACTACAGTCCCTGAGACTACCATGGCCTCCAGCACAACCTCCACT GCAGGCTCTGAGAAAACGATGGCCTCCTCCATAATTTCTGAGACCACCATGGCCTCCACC ACAGGCTCTGAGACTGCCACAGTCTCTACCACAGGCTCTGAGACCACCACCACCTCCACT GCAAGCTCTGAGGCCACTAAAGTCTCTACCACAGGCTCTGAAACCACCACAGCATCTACT GCAGGTTCTGAGACCACCACTACCTCCACCTCCATGGCAGGCTCTGAGGCCACCACAACC TCAACTGCAGACTCCAAGGTGATCACGGCGTCCAGCATGAGCTCTGAGACCACTGTGGCC CCCGCTGCAGGCTCTAACACCACCACAGCCTCTACCACAGGCTCTGAGACCACTACAATC CTGATTAAAGCCTCTGAGACCACCACAGCCTCTACAGCAGGTTCTGAGACCACCACCCCC TCCCCCACAGGCTCTCAGACCACCATAGTCTCTATTTCAGGTTCTGAGATCACCACCACC TCTACGGCAGGATCCGAGAACACCACAGTCTCTAGTGCAGGCTCTGGGACCACCACAGCT TCTATGGCAGGCTCTGAGACCACCGTCTCCACTGCAGGCTCTGAGACCACTACAGTCTCT ATCACAGGCACTGAGACCACCATGGTCTCTGCCATGGGCTCAGAGACCACCACAAACTCT ACTACAAGCTCTGAGACCACCGTCACCTCTACTGCAGGCTCTGAGACCACCACAGTCTCC ACCGTGGGCTCTGAGACCACCACAGCCTATACTGCAGATTCTGAGACCACTGCAGCCTCT ACCACAGGCTCTGAGATGACCACAGTCTTCACTGCAGGCTCGGAAACCATCACACCCTCT ACTGCAGGCTCAGAGACCACCACAGTCTCTACTGCAGGCTCTGAGACCACTACAGTCTCC ACCACAGGCTCTGAGACCACAACAGCCTCTACTGCACATTCTGAGACGACTGCAGCCTCC ACCATGGGCTCTGAGACCACCAAAGTCTCAACTGCAGGCTCTGAGACCACAGTCTCCACT GCAGGCTCTGAGACCACTGCAGCCTCTACTGAAGATTCTGAAACCAACACAGCATTTACT GAAGATTCTAAGACTACCACAGCCTCTACTACAGGGTTTGAGACAACCGCAGCCTCTACT ACAGGCTCTGAGCCTACCATGGCATCCACCATGGGCTCTGAGACCACTATGGCCTCTACC ATAGGCCCTGAGACCACCAAGGTCTCCACTGCAAGCTCTGAGGTGACCACAGTCTTTGCT GCAGGCTCTGAGACAATCAGAGCCTCTACCGTAGGCTCTGAGACCACCACAGTCTCTACC ACAGGCTCTGAGACCACCACAGCCTCCATCATGGGCTCTGAGACCAGCACAGATTCTACC ACAGGCTCTGAGACCACCACAGCCTCTACTGAAGGCTCTGAGACCACCACAGCTTCCACT GAAGGCTCTGAGGCCACTACAGTCTCCACCACAGGCTCTGAGACCACTACAGTTTCTATC ACAGACTCAGAGACCACCACCACCTGTACTGAAGGCTCTGAGATGACTGCAGTCTCCACC ACAGTCTTTGAGACCACTACAGCCTCTACTGAAGGCTCTGAGATCACAATAGCCTCTACT TCAGACTCTGAGACCACCACAGCTTCTACTGAAGGTTCTGAGACCACTACAGTCACTACC GCAGGCTCTGAGACCAAAACAGCCTATACTACAGGCTCTGAGACCACCACAGCCTCTAAT ACAGGCTTGGAGACCACCACAGTCTTTACCATAGGCTCTGACACCACCACAGCCTCTACT GAAGGCTCTGAGACCACTGCAGTCTCTGCCACAGGCTCTGAGATGACCACAGTCTCTACT GAAGGCTCTGAGAACACTACAGTCTCCACCACAGGCTCTGAGACCACTACAGTTTCCACC ACAGGCTTGGAGACCACCACCACTTCCACTGAAGGCTCTGAGATGACTACAGTCTCCACC ACAGGTGCTGAGACCACCACAGACTCTACTGAAGGCTCTGGGACCACTGCAGCCTCCACT GCAGGCTCTGAGACCACCACAGTCTCTACTGCAGATTCTGAGAACACCACAGCATCTACT GCAGATTCTGAGACCACCTCAGCCTCTACTACAGGCTCTGAGACCACCACAGCCTCTACT ACAAGCTCTGAGACCACCACAGCCTCTACTGAAGGCTCTGAGACCACTACAGTCTCCACC ACAGACTCTGAGACCACCATGGTCTCTACCACAGGCTCTGAGAGGACCATCACCTCTACT GAAGGCTCTGAGACCACTACAGTATCTGCCACAGGCTCTGAGACCACAGTCTCTACTGAA GGCTCTGGGACCACTACAGTCTCCATCACAGGCTCTGAGACCACTAAAGTTTCTACCACA GGTTCAGAGACCACCACCACTTCTACTGAAGGCTCTGAGATTACTACAGCCTCCATCACA GGCTCTGAGACCACCACAGCCTCTACTGAAGGCTCCGAGACCACCACAGCCTCTACTGAA GGCTCCGAGACCACCTCAGCCTCTACTACAGGCTCTGAGACCACCACAGCCTCTACTACA AGCTCTGAGACCACCATGGCATCCATCATGGGCTCTGAGACCACTATGGCCTCTACCATA GGCTCTGAGACCACCAAGGTCTCCACTGCAAGCTCTAAAATGACCACAGTCTTCACTGAA AACTCTGAGACCACCATAGCCTCTACCACAGCCTCTGAGACCACCACAGTCTCCACTGCA GGCTCTGAGACCATCCCAGCCTCTACAGCAGGCTCTGAGACCACCACCACCACCTCTACT GAAGGCTCTGAGACCACTACAGCCTCTACTGAAGGCTCTGAGACCACCACAGCCTCTACT GAAAGCTCTGAGACCACTACAGCCACTACCATAGGCTCTGAGACCACCACAGCCTCTACT GAAGGCTCTGAGACTACCACCACCTCTACTGAAGGCTCTGAGACCACCACAGCCTCTACT GAAGGCTCTGAGATCACTACAGTTTCTACCACAGGCTCTGAGACCACCACAGCCTCTACT GAAGGCTCTGAGACCACCACAGCCTCTACTGAAGGCTCTGAGCTCACTACAGTTTCTACC ACAGGCTCTGAGACCATCACAGTCTCTGCTGAAGGCTCTGAGACCACTACAGTCACTACT ATGGGCTCTGAGACCACCACGGCCTCTACTGCAGGCTCAGAGACCACCACAGTCTCTACT GCAGGCTCTGAGACCACCACAGCCTCTATTGAAGGCTCTGAGACCACTACAGTCTCCTCC ACAGGCTCTGAGACCACCACAGTCTCTACCACAGGCACTGAGACTACCATCACCTCTACT GAAGGTTCAGAGACCACTACAGTCACTACTGCAGGTTCTGAGACCACAGCAGTCTATACC ACAGGCTCTGAGACTACCACCACCTCTACTGAAGGCTCTGAGACAACCACAGTCTCTACC ACGGGCTCTGAGACCACCACAGCCTCTACCGCAGATTTGGAGACCACCACAGTCTCCACC TCAGGCTCTGGGACCACCACAGCCTCTACCGCAGGCTCTGAGACCACAACAGTCTATATC ACAGGCTCTAAGACTACCACCGCCTCTACTGAAGGCTCTGAGGCCACTACAGTTTCTACC ACTAGCTCTGAGACCACCACAGCCTCTACCACAGGCTCTGAGATGACTACAGTCTTTACC ACAGTCTCTGAGACCACCACAGTCTCTACCATAGGCTCTGAGGCCACCACATCCTCTGCT GCAGGCTCTGAGGCCACCACCACCTCTACTGAAGGCTCTGAGACCACCACAGCCTCCACT GCAGGCTCTGAGACCACCACAGCCTCCACTGCAGGCTCTGAGACCACCACAGCCTCCACT TCAGGCTCTGAGACCAACACAGCCTGTACCACAGGTTCTGAGACCTCCACACCCTCCAGT GCAGGCTCTGAGACCAACACTGCCTTCATCATAGGCTCTGAGAGCACCATAGCTTCCACT GCAAGCTTGGAGCCCACTGCAACTTCCCTCACAGGCTCTGAGACCACCACAGTCTCTATC ACAGCTTCTGGGGCCACTGCAGCCTCCACCACTGTCTCTTCCACCACGTTTGTACTCACC AAGGCCACTGACGTTTCTATCCAGCCCATCACCAACACACCTATGTCAGGCACCAGAACC ACTGGAACCAGACTCACTGCCTCCAGCTCTGTCACCATGGCCCCTGGAATGGACTTCACG GCCTCTGCTGCCAGCCATACTGTGCCAGGAATAGTCTTAAACACCTCTGGCCTGGGTACA TCCACTATGGGAGCATCATCTACCACCTCAGCCCACGGCGTCAGGACCACCACAGGATCC ACCCGTGAGCCAACCAGCAGCACCTTCCAGGAAACAGGCCCGGTGTCCATGGGCACAAAC ACAGTTAGCATGAGCCACACACCCACAAACGTGATCAAACCAAGTGGATATTTACAGCCC TGGGCTATCATCCTCATTTCCCTGGCTGCAGTTGTGGCTGCTGTTGGATTGTCAGTAGGA CTGAGTTTTTGTCTGAGAAACCTTTTCTTCCCCCTGAGATATTGTGGTATTTATTACCCC CATGGCCACAGCCACAGCCTTGGTCTGGACCTGAACTTGGGCCTGGGCTCTGGGACATTC CACAGCCTGGGAAATGCACTGGTTCATGGAGGAGAACTTGAAATGGGACATGGAGGAACA CACGGCTTTGGATATGGAGTGGGCCATGGACTGAGCCACATCCATGGAGATGGCTACGGA GTGAATCATGGCGGGCATTATGGACATGGAGGAGGCCACTGA >chr6_cox_hap1_80|geneid_v1.2_predicted_protein_80|1694_AA MASTAAFTTGSETNTASTTDSGTTIASTGTFTTGSDTTTGSTAGSETIVASTTVSGTTTT FTIASTTVPETTMASSTTSTAGSEKTMASSIISETTMASTTGSETATVSTTGSETTTTST ASSEATKVSTTGSETTTASTAGSETTTTSTSMAGSEATTTSTADSKVITASSMSSETTVA PAAGSNTTTASTTGSETTTILIKASETTTASTAGSETTTPSPTGSQTTIVSISGSEITTT STAGSENTTVSSAGSGTTTASMAGSETTVSTAGSETTTVSITGTETTMVSAMGSETTTNS TTSSETTVTSTAGSETTTVSTVGSETTTAYTADSETTAASTTGSEMTTVFTAGSETITPS TAGSETTTVSTAGSETTTVSTTGSETTTASTAHSETTAASTMGSETTKVSTAGSETTVST AGSETTAASTEDSETNTAFTEDSKTTTASTTGFETTAASTTGSEPTMASTMGSETTMAST IGPETTKVSTASSEVTTVFAAGSETIRASTVGSETTTVSTTGSETTTASIMGSETSTDST TGSETTTASTEGSETTTASTEGSEATTVSTTGSETTTVSITDSETTTTCTEGSEMTAVST TVFETTTASTEGSEITIASTSDSETTTASTEGSETTTVTTAGSETKTAYTTGSETTTASN TGLETTTVFTIGSDTTTASTEGSETTAVSATGSEMTTVSTEGSENTTVSTTGSETTTVST TGLETTTTSTEGSEMTTVSTTGAETTTDSTEGSGTTAASTAGSETTTVSTADSENTTAST ADSETTSASTTGSETTTASTTSSETTTASTEGSETTTVSTTDSETTMVSTTGSERTITST EGSETTTVSATGSETTVSTEGSGTTTVSITGSETTKVSTTGSETTTTSTEGSEITTASIT GSETTTASTEGSETTTASTEGSETTSASTTGSETTTASTTSSETTMASIMGSETTMASTI GSETTKVSTASSKMTTVFTENSETTIASTTASETTTVSTAGSETIPASTAGSETTTTTST EGSETTTASTEGSETTTASTESSETTTATTIGSETTTASTEGSETTTTSTEGSETTTAST EGSEITTVSTTGSETTTASTEGSETTTASTEGSELTTVSTTGSETITVSAEGSETTTVTT MGSETTTASTAGSETTTVSTAGSETTTASIEGSETTTVSSTGSETTTVSTTGTETTITST EGSETTTVTTAGSETTAVYTTGSETTTTSTEGSETTTVSTTGSETTTASTADLETTTVST SGSGTTTASTAGSETTTVYITGSKTTTASTEGSEATTVSTTSSETTTASTTGSEMTTVFT TVSETTTVSTIGSEATTSSAAGSEATTTSTEGSETTTASTAGSETTTASTAGSETTTAST SGSETNTACTTGSETSTPSSAGSETNTAFIIGSESTIASTASLEPTATSLTGSETTTVSI TASGATAASTTVSSTTFVLTKATDVSIQPITNTPMSGTRTTGTRLTASSSVTMAPGMDFT ASAASHTVPGIVLNTSGLGTSTMGASSTTSAHGVRTTTGSTREPTSSTFQETGPVSMGTN TVSMSHTPTNVIKPSGYLQPWAIILISLAAVVAAVGLSVGLSFCLRNLFFPLRYCGIYYP HGHSHSLGLDLNLGLGSGTFHSLGNALVHGGELEMGHGGTHGFGYGVGHGLSHIHGDGYG VNHGGHYGHGGGH* # Gene 81 (Forward). 3 exons. 205 aa. Score = 2.47 First 2473320 2473506 0.51 + 0 1 2.89 4.59 2.55 0.00 AA 1: 63 chr6_cox_hap1_81 Internal 2475528 2475761 2.03 + 2 1 0.69 -0.19 16.82 0.00 AA 63:141 chr6_cox_hap1_81 Terminal 2478399 2478592 -0.06 + 2 0 5.30 0.00 5.77 0.00 AA 141:205 chr6_cox_hap1_81 >chr6_cox_hap1_81|geneid_v1.2_predicted_cDNA_81|615_NN ATGCCCCGCTACGTCCCCCTTCTGCTGCTCCTGCTTCTCCTGAGGTGTTCAGAACGGGGT GGAGGAGTTAATTTTGGTGAGAAGGATGCAAAAGTCCCCGGGACCTGGAGAGATGGAGTC AGGGTCCCTGGAGAAGGAGCCTCTTGGGACTCAGACAGGGCCAGTCCCGAGCGAAGGTAC GGAATAGACCCAGGGACCACCAAGGACTCCATCACTGCAGACCCAAGGACCACAGAGGAC TCCGTCACTGCAGACCCAGGGACCACCAAACACTCCATCACTGTAGACCCAGGGACCACT GAGGACTCTGTCACTGCAGACCCAGGGACCACCAAACACTCCATCACTGCAGACCCAGGG ACCACCGAGGACTCCGTCACTGCAGACCCAGGGACCACAGAAGATGAAACCACTAAACAT GAAAGAGTGTTTCCTGCCTCCATTAAATCCATCCACCAGGGTTATTTATCATCCCCATGT CATGGACTACAGTACACCATAAAGAGGACCCCAGCAGTGACTACAGTTGGTTCTAGAAAA AGGAGACCCCTCATCCGCCTCTGCAAGACTATGCAGCATGATGTGTATCCTCAGGCCTCC ACTCCTCCGCCCTAG >chr6_cox_hap1_81|geneid_v1.2_predicted_protein_81|205_AA MPRYVPLLLLLLLLRCSERGGGVNFGEKDAKVPGTWRDGVRVPGEGASWDSDRASPERRY GIDPGTTKDSITADPRTTEDSVTADPGTTKHSITVDPGTTEDSVTADPGTTKHSITADPG TTEDSVTADPGTTEDETTKHERVFPASIKSIHQGYLSSPCHGLQYTIKRTPAVTTVGSRK RRPLIRLCKTMQHDVYPQASTPPP* # Gene 82 (Reverse). 16 exons. 1296 aa. Score = 42.95 Terminal 2535013 2536514 8.66 - 2 0 0.00 5.36 26.11 0.00 AA 796:1296 chr6_cox_hap1_82 Internal 2539324 2539496 -0.30 - 1 1 2.80 5.43 -0.59 0.00 AA 738:796 chr6_cox_hap1_82 Internal 2544333 2544475 -0.21 - 0 2 4.73 2.03 1.85 0.00 AA 691:738 chr6_cox_hap1_82 Internal 2562306 2562457 3.03 - 2 0 1.14 2.37 14.81 0.00 AA 640:690 chr6_cox_hap1_82 Internal 2563731 2564117 8.32 - 2 1 2.74 2.94 24.78 0.00 AA 511:640 chr6_cox_hap1_82 Internal 2564210 2564346 3.71 - 1 1 1.54 4.33 12.97 0.00 AA 465:511 chr6_cox_hap1_82 Internal 2564492 2564537 1.19 - 2 2 1.91 6.09 3.48 0.00 AA 450:465 chr6_cox_hap1_82 Internal 2564740 2564852 1.47 - 1 1 1.50 1.68 11.43 0.00 AA 412:450 chr6_cox_hap1_82 Internal 2567436 2567542 0.63 - 0 2 0.99 3.99 6.62 0.00 AA 377:412 chr6_cox_hap1_82 Internal 2567649 2567759 3.16 - 0 0 1.62 5.38 9.90 0.00 AA 340:376 chr6_cox_hap1_82 Internal 2569096 2569245 3.99 - 0 0 -0.64 6.15 14.22 0.00 AA 290:339 chr6_cox_hap1_82 Internal 2569485 2569595 2.65 - 0 0 2.39 2.70 11.50 0.00 AA 253:289 chr6_cox_hap1_82 Internal 2569755 2569890 0.01 - 1 0 3.66 0.68 6.00 0.00 AA 207:252 chr6_cox_hap1_82 Internal 2569989 2570152 3.27 - 0 2 4.30 5.60 5.82 0.00 AA 153:207 chr6_cox_hap1_82 Internal 2573521 2573824 4.91 - 1 0 2.08 2.10 18.50 0.00 AA 51:152 chr6_cox_hap1_82 First 2575768 2575919 -1.56 - 0 2 2.79 1.24 2.56 0.00 AA 1: 51 chr6_cox_hap1_82 >chr6_cox_hap1_82|geneid_v1.2_predicted_cDNA_82|3888_NN ATGGCTCCCACCTGGCTCTCAGACATTCCCCTGGTCCAACCCCCAGGCCATCAAGATGTC TCAGAGAGGCGGCTAGACACCCAGAGACCTCAAGTGACCATGTGGGAACGGGATGTTTCC AGTGACAGGCAGGAGCCAGGGCGGAGAGGCAGGTCCTGGGGGCTGGAGGGGTCACAGGCC CTGAGCCAGCAGGCTGAGGTGATCGTTCGGCAGCTGCAAGAGCTGCGGTGGCTGGAGGAG GAGGTCTGGCTCCTGCGGGAGACCTCGCTGCAGCAGAAGATGAGGCTAGAGGCCCAGGCC ATGGAGCTAGAGGCTCTGGCACGGGCGGAGAAGGCCGGCCGAGCTGAGGCTGAGGGCCTG CGTGCTGCTTTGGCTGGGGCTGAGGTTGTCCGGAAGAACTTGGAAGAGGGGAGGCAGCGG GAGCTGGAAGAGGTTCAGAGGCTGCACCAAGAGCAGCTGTCCTCTTTGACACAGGCTCAC GAGGAGGCTCTTTCCAGTTTGACCAGCAAGGCTGAGGGCTTGGAGAAGTCTCTGAGTAGT CTGGAAACCAGAAGAGCAGGGGAAGCCAAGGAGCTGGCCGAGGCTCAGAGGGAGGCCGAG CTGCTTCGGAAGCAGCTGAGCAAGACCCAGGAAGACTTGGAGGCTCAGGTGACCCTGGTT GAGAATCTAAGAAAATATGTTGGGGAACAAGTCCCTTCTGAGGTCCACAGCCAGACATGG GAACTGGAGCGACAGAAGCTTCTGGAAACCATGCAGCACTTGCAGGAGGACCGGGACAGC CTGCATGCCACCGCGGAGCTGCTGCAGGTGCGGGTGCAGAGCCTCACACACATCCTCGCC CTGCAGGAGGAGGAGCTGACCAGGAAGGTTCAACCTTCAGATTCCCTGGAGCCTGAGTTT ACCAGGAAGTGCCAGTCCCTGCTGAACCGCTGGCGGGAGAAGGTGTTTGCCCTCATGGTG CAGCTAAAGGCCCAGGAGCTGGAACACAGTGACTCTGTTAAGCAGCTGAAGGGACAGGTG GCCTCACTCCAGGAAAAAGTGACATCCCAGAGCCAGGAGCAGGCCATCCTGCAGCGATCC CTGCAGGACAAAGCCGCAGAGGTGGAGGTGGAGCGTATGGGTGCCAAGGGCCTGCAGTTG GAGCTGAGCCGTGCTCAGGAGGCCAGGCGTTGGTGGCAGCAGCAGACAGCCTCAGCCGAG GAGCAGTTGAGGCTTGTGGTCAATGCTGTCAGCAGCTCTCAGATCTGGCTCGAGACCACC ATGGCTAAGGTGGAAGGGGCTGCCGCCCAGCTTCCCAGCCTCAACAACCGACTCAGCTAT GCTGTCCGCAAGGTCCACACCATTCGGGGCCTGATTGCTCGAAAGCTTGCCCTTGCTCAG CTGCGCCAGGAGAGCTGTCCCCTACCACCACCGGTCACAGATGTGAGCCTTGAGTTGCAG CAGCTGCGGGAAGAACGGAACCGCCTGGATGCAGAACTGCAGCTGAGTGCCCGCCTCATC CAGCAGGAGGTGGGCCGGGCTCGGGAGCAAGGGGAGGCAGAGCGGCAGCAGCTGAGCAAG GTGGCCCAGCAGCTGGAGCAGGAGCTGCAGCAGACCCAGGAGTCCCTGGCTAGCTTGGGG CTGCAGCTGGAGGTAGCACGCCAGTGCCAGCAGGAGAGCACAGAGGAGGCTGCCAGTCTG CGGCAGGAGCTGACCCAGCAGCAGGAACTCTACGGGCAAGGTGTCGAGAGGGAAATGGGT GCTTCCCTTGGAGGGTGGGGTGGGAACTGCGAATCAAAGGTCCTGCTGATATGCCCCGTC TGCACTTTCACCCCAGCCCTGCAAGAAAAGGTGGCTGAAGTGGAAACTCGGCTGCGGGAG CAACTCTCAGACACAGAGAGGAGGCTGAACGAGGCTCGGAGGGAGCATGCCAAGGCCGTG GTCTCCTTGCGCCAGATTCAGCGCAGAGCCGCCCAGGAAAAGGAGCGGAGCCAGGAACTC AGGCGTCTGCAGGAGGAGGCCCGGAAGGAGGAGGGGCAGCGACTGGCCCGGCGCTTGCAG GAGCTAGAGAGGGATAAGAACCTCATGCTGAGGAACCAGGTGAAGAGTGTGGATGACTCA GTCCACCCCTCCCCGCACAGGAAAAACAACTCAGAGGACATCCCCTACTGGGAGTGGGCC AGGAGCGCTGGCTTCCACGCCAAGGAGAGGAGGGTGTTGTTGTGGCTGCAGAGTGACTCC TGCCCAGGGAATGTCCAGCTCTGGCATAAAGGACCCAGGTGTCCTCGAGCTGCCATCAGT CAGGAGGCCGTGCAGTCCGAGATGGGCTCGTCTCGGGCACCCTGGATGGGGCGTGTGGGT GGGCACGGGATGTTGGCACTGCTGCTGGCTGGTCTCCTCCTGCCAGGGACCTTGGCTAAG AGCATTGGCACCTTCTCAGACCCCTGTAAGGACCCCACGCGTATCACCTCCCCTAACGAC CCCTGCCTCACTGGGAAGGGTGACTCCAGCGGCTTCAGTAGCTACAGTGGCTCCAGCAGT TCTGGCAGCTCCATTTCCAGTGCCAGAAGCTCTGGTGGTGGCTCCAGTGGTAGCTCCAGC GGATCCAGCATTGCCCAGGGTGGTTCTGCAGGATCTTTTAAGCCAGGAACGGGGTATTCC CAGGTCAGCTACTCCTCCGGATCTGGCTCTAGTCTACAAGGTGCATCCGGTTCCTCCCAG CTGGGGAGCAGCAGCTCTCACTCGGGAAGCAGCGGCTCTCACTCGGGCAGCAGCTCTCAT TCGAGCAGCAGCAGCAGCTTTCAGTTCAGCAGCAGCAGCTTCCAAGTAGGGAATGGCTCT GCTCTGCCAACCAATGACAACTCTTACCGCGGAATACTAAACCCTTCCCAGCCTGGACAA AGCTCTTCCTCTTCCCAGACCTTTGGGGTATCCAGCAGTGGCCAAAGCGTCAGCTCCAAC CAGCGTCCCTGTAGTTCGGACATCCCCGACTCTCCCTGCAGTGGAGGGCCCATCGTCTCG CACTCCGGCCCCTACATCCCCAGCTCCCACTCTGTGTCAGGGGGTCAGAGGCCTGTGGTG GTGGTGGTGGACCAGCACGGTTCTGGTGCCCCTGGAGTGGTTCAAGGTCCCCCCTGTAGC AATGGTGGCCTTCCAGGCAAGCCCTGTCCCCCAATCACCTCTGTAGACAAATCCTATGGT GGCTACGAGGTGGTGGGTGGCTCCTCTGACAGTTATCTGGTTCCAGGCATGACCTACAGT AAGGGTAAAATCTACCCTGTGGGCTACTTCACCAAAGAGAACCCTGTGAAAGGCTCTCCA GGGGTCCCTTCCTTTGCAGCTGGGCCCCCCATCTCTGAGGGCAAATACTTCTCCAGCAAC CCCATCATCCCCAGCCAGTCGGCAGCTTCCTCGGCCATTGCATTCCAGCCAGTGGGGACT GGTGGGGTCCAGCTCTGTGGAGGCGGCTCCACGGGCTCCAAGGGACCCTGCTCTCCCTCC AGTTCTCGAGTCCCCAGCAGTTCTAGCATTTCCAGCAGCTCCGGTTTACCCTACCATCCC TGCGGCAGTGCTTCCCAGAGCCCCTGCTCCCCACCAGGCACCGGCTCCTTCAGCAGCAGC TCCAGTTCCCAATCCAGTGGCAAAATCATCCTTCAGCCTTGCGGCAGCAAGTCCAGCTCT TCTGGTCACCCTTGCATGTCTGTCTCCTCCTTGACACTGACTGGGGGCCCCGATGGCTCT CCCCATCCTGATCCCTCCGCTGGTGCCAAGCCCTGTGGCTCCAGCAGTGCTGGAAAGATC CCCTGCCGCTCCATCCGGGATATCCTAGCCCAAGTGAAGCCTCTGGGGCCCCAGCTAGCT GACCCTGAAGTTTTCCTACCCCAAGGAGAGTTACTCGACAGTCCATAA >chr6_cox_hap1_82|geneid_v1.2_predicted_protein_82|1296_AA MAPTWLSDIPLVQPPGHQDVSERRLDTQRPQVTMWERDVSSDRQEPGRRGRSWGLEGSQA LSQQAEVIVRQLQELRWLEEEVWLLRETSLQQKMRLEAQAMELEALARAEKAGRAEAEGL RAALAGAEVVRKNLEEGRQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLSS LETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQVTLVENLRKYVGEQVPSEVHSQTW ELERQKLLETMQHLQEDRDSLHATAELLQVRVQSLTHILALQEEELTRKVQPSDSLEPEF TRKCQSLLNRWREKVFALMVQLKAQELEHSDSVKQLKGQVASLQEKVTSQSQEQAILQRS LQDKAAEVEVERMGAKGLQLELSRAQEARRWWQQQTASAEEQLRLVVNAVSSSQIWLETT MAKVEGAAAQLPSLNNRLSYAVRKVHTIRGLIARKLALAQLRQESCPLPPPVTDVSLELQ QLREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQTQESLASLG LQLEVARQCQQESTEEAASLRQELTQQQELYGQGVEREMGASLGGWGGNCESKVLLICPV CTFTPALQEKVAEVETRLREQLSDTERRLNEARREHAKAVVSLRQIQRRAAQEKERSQEL RRLQEEARKEEGQRLARRLQELERDKNLMLRNQVKSVDDSVHPSPHRKNNSEDIPYWEWA RSAGFHAKERRVLLWLQSDSCPGNVQLWHKGPRCPRAAISQEAVQSEMGSSRAPWMGRVG GHGMLALLLAGLLLPGTLAKSIGTFSDPCKDPTRITSPNDPCLTGKGDSSGFSSYSGSSS SGSSISSARSSGGGSSGSSSGSSIAQGGSAGSFKPGTGYSQVSYSSGSGSSLQGASGSSQ LGSSSSHSGSSGSHSGSSSHSSSSSSFQFSSSSFQVGNGSALPTNDNSYRGILNPSQPGQ SSSSSQTFGVSSSGQSVSSNQRPCSSDIPDSPCSGGPIVSHSGPYIPSSHSVSGGQRPVV VVVDQHGSGAPGVVQGPPCSNGGLPGKPCPPITSVDKSYGGYEVVGGSSDSYLVPGMTYS KGKIYPVGYFTKENPVKGSPGVPSFAAGPPISEGKYFSSNPIIPSQSAASSAIAFQPVGT GGVQLCGGGSTGSKGPCSPSSSRVPSSSSISSSSGLPYHPCGSASQSPCSPPGTGSFSSS SSSQSSGKIILQPCGSKSSSSGHPCMSVSSLTLTGGPDGSPHPDPSAGAKPCGSSSAGKI PCRSIRDILAQVKPLGPQLADPEVFLPQGELLDSP* # Gene 83 (Forward). 3 exons. 346 aa. Score = 8.53 First 2578511 2578748 4.21 + 0 1 1.90 3.89 14.35 0.00 AA 1: 80 chr6_cox_hap1_83 Internal 2580483 2581041 5.43 + 2 2 1.57 4.77 16.57 0.00 AA 80:266 chr6_cox_hap1_83 Terminal 2581513 2581753 -1.11 + 1 0 3.80 0.00 4.01 0.00 AA 266:346 chr6_cox_hap1_83 >chr6_cox_hap1_83|geneid_v1.2_predicted_cDNA_83|1038_NN ATGCTGCCCTGCTTCCAACTGCTGCGCATAGGGGGCGGCAGGGGCGGTGATCTCTACACC TTCCACCCCCCCGCCGGGGCTGGCTGCACCTATCGCTTGGGCCACAGGGCCGACCTGTGT GATGTGGCCCTGCGGCCCCAGCAGGAGCCTGGCCTCATCTCTGGGATCCACGCCGAACTG CATGCCGAGCCCCGGGGTGATGACTGGAGGGTCAGCCTGGAAGACCACAGCAGCCAAGGT ACTTTGGTCAATAATGTCCGACTCCCAAGAGGTCACAGGCTGGAATTGAGTGATGGAGAC CTCCTGACCTTTGGCCCTGAAGGGTCCCCAGGAACCAGCCCCTCGGAGTTCTACTTCATG TTCCAACAAGTACGAGTCAAGCCTCAGGACTTTGCTGCCATTACCATCCCACGGTCTAGG GGAGAAGCCCGGGTTGGGGCTGGTTTCCGGCCTATGCTGCCCTCCCAGGGGGCTCCACAG CGGCCTCTCAGCACCTTCTCCCCTGCCCCCAAGGCCACACTGATCCTAAACTCCATAGGC AGCCTCAGCAAGCTCCGGCCCCAGCCCCTCACCTTCTCCCCTAGTTGGGGTGGACCAAAG AGCCTGCCTGTTCCCGCCCCACCTGGGGAAGTGGGGACCACGCCTTCTGCTCCACCCCAA CGCAATCGGAGGAAATCTGTTCACCGAGTGTTGGCGGAACTGGATGATGAGAGTGAGCCT CCTGAGAACCCGCCACCGGTCCTTATGGAGCCCAGGAAGAAACTCCGTGTAGACAAAGCC CCACTGACTCCCACTGGAAATCGACGTGGCCGTCCTCGGAAGTACCCAGTGAGCGCTCCC ATGGCTCCCCCTGCAGTTGGGGGCGGGGAGCCCTGTGCAGCTCCTTGTTGCTGCCTGCCC CAGGAAGAGACAGTGGCCTGGGTTCAGTGTGATGGCTGTGACGTCTGGTTCCATGTGGCC TGTGTTGGCTGCAGCATCCAGGCTGCCAGGGAGGCCGACTTCCGATGCCCAGGGTGCCGG GCTGGCATTCAGACCTAA >chr6_cox_hap1_83|geneid_v1.2_predicted_protein_83|346_AA MLPCFQLLRIGGGRGGDLYTFHPPAGAGCTYRLGHRADLCDVALRPQQEPGLISGIHAEL HAEPRGDDWRVSLEDHSSQGTLVNNVRLPRGHRLELSDGDLLTFGPEGSPGTSPSEFYFM FQQVRVKPQDFAAITIPRSRGEARVGAGFRPMLPSQGAPQRPLSTFSPAPKATLILNSIG SLSKLRPQPLTFSPSWGGPKSLPVPAPPGEVGTTPSAPPQRNRRKSVHRVLAELDDESEP PENPPPVLMEPRKKLRVDKAPLTPTGNRRGRPRKYPVSAPMAPPAVGGGEPCAAPCCCLP QEETVAWVQCDGCDVWFHVACVGCSIQAAREADFRCPGCRAGIQT* # Gene 84 (Reverse). 4 exons. 250 aa. Score = 7.59 Terminal 2583638 2583904 -1.47 - 0 0 0.00 3.84 3.07 0.00 AA 162:250 chr6_cox_hap1_84 Internal 2584167 2584325 3.14 - 0 0 1.96 2.33 13.90 0.00 AA 109:161 chr6_cox_hap1_84 Internal 2584610 2584740 4.50 - 2 0 4.60 2.75 12.74 0.00 AA 65:108 chr6_cox_hap1_84 First 2589267 2589459 1.42 - 0 1 1.19 2.26 10.88 0.00 AA 1: 65 chr6_cox_hap1_84 >chr6_cox_hap1_84|geneid_v1.2_predicted_cDNA_84|750_NN ATGGCGTACTGTGGGCCCCAGGTTGGAGTGGGGCTAGTGCCCCAAGGCGGCTTGGAGACC TCTCAGCCTGAGGGTGAAGCAGGAGTCGGGGTGGAGAGCAACTCCGATGGGGCCTCCCCG GAGCCCTGCACCGTCACCCCTGGTGCCGTGAAGCTGGAGAAGGAGAAGCTGGAGCAAAAC CCGGAGGAGGCAAGGAAGGTATTCAGCCAAACGACCATCTGCCGCTTTGAGGCTCTGCAG CTTAGCTTCAAGAACATGTGTAAGCTGCGGCCCTTGCTGCAGAAGTGGGTGGAGGAAGCT GACAACAATGAAAATCTTCAGGAGATATGCAAAGCAGAAACCCTCGTGCAGGCCCGAAAG AGAAAGCGAACCAGTATCGAGAACCGAGTGAGAGGCAACCTGGAGAATTTGTTCCTGCAG TGCCCGAAACCCACACTGCAGCAGATCAGCCACATCGCCCAGCAGCTTGGGCTCGAGAAG GATGTGGTCCGAGTGTGGTTCTGTAACCGGCGCCAGAAGGGCAAGCGATCAAGCAGCGAC TATGCACAACGAGAGGATTTTGAGGCTGCTGGGTCTCCTTTCTCAGGGGGACCAGTGTCC TTTCCTCTGGCCCCAGGGCCCCATTTTGGTACCCCAGGCTATGGGAGCCCTCACTTCACT GCACTGTACTCCTCGGTCCCTTTCCCTGAGGGGGAAGCCTTTCCCCCTGTCTCTGTCACC ACTCTGGGCTCTCCCATGCATTCAAACTGA >chr6_cox_hap1_84|geneid_v1.2_predicted_protein_84|250_AA MAYCGPQVGVGLVPQGGLETSQPEGEAGVGVESNSDGASPEPCTVTPGAVKLEKEKLEQN PEEARKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNNENLQEICKAETLVQARK RKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKRSSSD YAQREDFEAAGSPFSGGPVSFPLAPGPHFGTPGYGSPHFTALYSSVPFPEGEAFPPVSVT TLGSPMHSN* # Gene 85 (Reverse). 10 exons. 486 aa. Score = 25.89 Terminal 2593061 2593087 -0.05 - 0 0 0.00 6.43 2.72 0.00 AA 478:486 chr6_cox_hap1_85 Internal 2616831 2616954 1.32 - 1 0 5.16 0.44 7.40 0.00 AA 436:477 chr6_cox_hap1_85 Internal 2643729 2643874 0.89 - 0 2 4.61 6.90 -2.56 0.00 AA 388:436 chr6_cox_hap1_85 Internal 2658149 2658246 -2.11 - 2 0 0.50 2.15 3.26 0.00 AA 355:387 chr6_cox_hap1_85 Internal 2686877 2686924 1.59 - 2 1 3.59 5.07 3.47 0.00 AA 339:355 chr6_cox_hap1_85 Internal 2687505 2687624 0.98 - 2 1 2.79 4.69 3.72 0.00 AA 299:339 chr6_cox_hap1_85 Internal 2687749 2688024 1.26 - 2 1 2.45 2.53 8.20 0.00 AA 207:299 chr6_cox_hap1_85 Internal 2688612 2688887 8.22 - 2 1 1.71 -5.63 38.94 0.00 AA 115:207 chr6_cox_hap1_85 Internal 2689138 2689407 15.05 - 2 1 4.61 2.62 39.26 0.00 AA 25:115 chr6_cox_hap1_85 First 2689538 2689610 -1.25 - 0 1 1.06 2.71 3.71 0.00 AA 1: 25 chr6_cox_hap1_85 >chr6_cox_hap1_85|geneid_v1.2_predicted_cDNA_85|1458_NN ATGCGGGTCATGGCGCCCCGAGCCCTCCTCCTGCTGCTCTCGGGAGGCCTGGCCCTGACC GAGACCTGGGCCTGCTCCCACTCCATGAGGTATTTCGACACCGCCGTGTCCCGGCCCGGC CGCGGAGAGCCCCGCTTCATCTCAGTGGGCTACGTGGACGACACGCAGTTCGTGCGGTTC GACAGCGACGCCGCGAGTCCGAGAGGGGAGCCGCGGGCGCCGTGGGTGGAGCAGGAGGGG CCGGAGTATTGGGACCGGGAGACACAGAACTACAAGCGCCAGGCACAGGCTGACCGAGTG AGCCTGCGGAACCTGCGCGGCTACTACAACCAGAGCGAGGACGGGTCTCACACCCTCCAG AGGATGTATGGCTGCGACCTGGGGCCCGACGGGCGCCTCCTCCGCGGGTATGACCAGTCC GCCTACGACGGCAAGGATTACATCGCCCTGAACGAGGACCTGCGCTCCTGGACCGCCGCG GACACCGCGGCTCAGATCACCCAGCGCAAGTTGGAGGCGGCCCGTGCGGCGGAGCAGCTG AGAGCCTACCTGGAGGGCACGTGCGTGGAGTGGCTCCGCAGATACCTGGAGAACGGGAAG GAGACGCTGCAGCGCGCAGAACCCCCAAAGACACACGTGACCCACCACCCCCTCTCTGAC CATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACACTGACC TGGCAGCGGGATGGGGAGGACCAGACCCAGGACACCGAGCTTGTGGAGACCAGGCCAGCA GGAGATGGAACCTTCCAGAAGTGGGCAGCTGTGGTGGTGCCTTCTGGACAAGAGCAGAGA TACACGTGCCATATGCAGCACGAGGGGCTGCAAGAGCCCCTCACCCTGAGCTGGGAGCCA TCTTCCCAGCCCACCATCCCCATCATGGGCATCGTTGCTGGCCTGGCTGTCCTGGTTGTC CTAGCTGTCCTTGGAGCTGTGGTCACCGCTATGATGTGTAGGAGGAAGAGCTCAGGCAGC AACAGTGCCCAGGGCTCTGATGAGTCTCTCATCACTTGTAAAGCACCAGTTGTCACAGGG CAAATACAGCAACAGCAGAAGGGAATTGCTACTGAGCCTGATGCTCTGATGGAAGCTCTG AGTGGAGACTTTATTTCACGTGTGACTAGAGCAGGCTGGTTTGGAACAGGGCTTGGCCAT CAGCGTTTGTGTCAGATGAGAATCATGCAAGGATCCAGTGTGATGGGCAGCATCGCTTCG AGGTCAGTGTTAGTGAGCTGCCTGATGAGACAGATGTCTCCTCCACGCGGCGGGGAACTC ACACCTGCCGCTGTGAAAATGCAGACCCGCGGGGCAGTAATTCCGAGTCCAGCCTGGGGC GCGATCTGGAATCTTGACTCGCTTGAAACACCACGGCGGATTCGGAGACAGATTGACAGG CCTCGGAAGTCAAAATAA >chr6_cox_hap1_85|geneid_v1.2_predicted_protein_85|486_AA MRVMAPRALLLLLSGGLALTETWACSHSMRYFDTAVSRPGRGEPRFISVGYVDDTQFVRF DSDAASPRGEPRAPWVEQEGPEYWDRETQNYKRQAQADRVSLRNLRGYYNQSEDGSHTLQ RMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTAAQITQRKLEAARAAEQL RAYLEGTCVEWLRRYLENGKETLQRAEPPKTHVTHHPLSDHEATLRCWALGFYPAEITLT WQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHMQHEGLQEPLTLSWEP SSQPTIPIMGIVAGLAVLVVLAVLGAVVTAMMCRRKSSGSNSAQGSDESLITCKAPVVTG QIQQQQKGIATEPDALMEALSGDFISRVTRAGWFGTGLGHQRLCQMRIMQGSSVMGSIAS RSVLVSCLMRQMSPPRGGELTPAAVKMQTRGAVIPSPAWGAIWNLDSLETPRRIRRQIDR PRKSK* # Gene 86 (Forward). 6 exons. 943 aa. Score = 47.10 First 2690157 2690203 -4.27 + 0 2 2.48 -2.95 2.52 0.00 AA 1: 16 chr6_cox_hap1_86 Internal 2693145 2694220 19.16 + 1 1 -0.44 -0.37 62.99 0.00 AA 16:375 chr6_cox_hap1_86 Internal 2694723 2694880 -0.58 + 2 0 0.67 0.25 11.04 0.00 AA 375:427 chr6_cox_hap1_86 Internal 2695389 2695803 3.22 + 0 1 -2.84 0.38 25.60 0.00 AA 428:566 chr6_cox_hap1_86 Internal 2697826 2698628 22.68 + 2 0 0.90 3.46 62.67 0.00 AA 566:833 chr6_cox_hap1_86 Terminal 2698713 2699042 6.89 + 0 0 -4.03 0.00 35.77 0.00 AA 834:943 chr6_cox_hap1_86 >chr6_cox_hap1_86|geneid_v1.2_predicted_cDNA_86|2829_NN ATGGGGAACTTGATGCCAGACAGTGAGCTCGCCCTGGGAATGGACGTAACTGATTTCAAG CAACAGCAGTATTACTTCCATTCAATACTTGGACCTGCAAACATCAAAAAAGCCACTGGA GAAACTGAACGACTCTCTGAAAGCCTTAAACTAAGATATGAAGAAGTTGAAATCTGGAAA AAACTTGAGGAAAAGGACAAGCAGGGGGAAGCACAGTGGCTACAACAAAAAAGGCAGGAA ACAGGAAGAGAGGATGGCAGCACGTTGGCTAAAGGTTCTTTGGAGATTGTATTGGATTCC AAAGACAAAACCCAAAAGAGCAATGGTGAAAAGAATGAAAAATGTGAGACCAAAGAGAAA GGAGCAATCACAGCAAAGGAACTATACACAATGATGATGGATAAAAACATCAGCTTGATT ATAATGGATGCTCAAAGAATGCAGGATTATCAGGATTCCTGTATTTTACATTCTCTCAGT GTTCCTGAAGAAGCCATCAGTCCAGTAGTCACTGCTAGTTGGATTGAAGCACACCTCCCA GATAATTCTATAGACACATGGAAGAAGAGGGGGAATGTGGAGTATATGGTACTTCTTGAC TGGTTTAGTTCTGCAAAAGATTTACAGATTAGAACAACTCTCTGGCATCTGAAAGATGCA CTTTTCAAGTGGGAAAGTAAGACTGTCCTGTGCAATGGGCCTTGGGCTTTGGTTTTAGAG GGAGGCTATAAAAACTGGTTCCTTTGCTATTCCCAGTATACAACAAATGCTAAGGTCACT CCACCCCCACAACACCAGAATGAAGAGTTGTCTATCTCATTGGATTTTACTTATCCCTCA TTGGAAGAATCAATTCCTTCTAAACCTGCTGCCGAGATGCCACCTCCACCTATAGAAGTG GATGAAGACATAGAATTGATAAGTGATCAAATAAGTGATAATGATCAAAATGAGAGGACA GGACCACTGAATATATCAATTCCAGTTGAATCAGTTGCTGCTTCTAAATCTGATGTTTCA CCCATCATTCAGCCAGTGCCTAGCATAAAGAATGTTCCACAGATTGATCATACTAAAAAA CTGGCAGTCAAATTGCCTGAAGAGCATATAATCAAATCTGAAAGGGATTCAGGTTCAGGC AAGCCTTTTAAGATTAAAGGACAACCAGAAACTGGAATTCTAAGGACAGAAACTTTTAGA GAGGATACAGATGATACTGAAAGAAATAAAACTCAACGAGAACCTTCGATAATAGCACGA AGTGAAGAAATGGGGAGGATGGGGCATAAAGGTGAAGTGGCAGAAGAATTTGGTATAATC ATGAAAGCCCCGTGGACAGGACAGTATAGATATATCAGTCCAAAAGACCTTAAAGTCACC ATTGGGAAGATCAATTACCAGTTTGCAGGATACAGTCAAGATTCACAAGAATTTTTTCTG TTCCTAATGGATGGTCTCCGTGAAGATCTAAATAAAACTGATAATCGGAAGACATATAAA GAAGAAAATAATGATCATCTCAATGACTTTAAAGCTGCAGAACATGCCTGGCAGAAACAC AAGCGGCTCTATGAGTCTATTATTGTTGCACTTTTTCAGGGTCAATTCAAATCTACAGTA CAGTGCCTCACCCGTCACAAAAAGTCTAGGACACTTGAGGCCTTCATGTATTTGTCTCTA CTGATAGCATCCACAAGATTTGATGGCGTGATGTCTCACAGAAAGTTCTCCACTCCCAGA CATGGGTCCCTCGGCTTCCTGCCTTGGAAGCGCAGCAGCAGGCATTGTGGGAAGGTGAAG AGCTTCCCTAAGGATGACCCGTCCAAGCCGGTCCACCTCACAGCCTTCCTGGGATACAAG GCTGGCATGACCCACATCGTGCGGGAAGTCGACAGGCCAGGATCCAAGGTGAACAAGAAG GAGGTGGTGGAGGCTGTGACCATTGTGGAGAGGCCACCAGTGGGCATTGTGGGCTGCGTG GAAACCCCTCAAGGCTTCCGGACTTGCAAGACTGTCTTCGCTGAGCACATCAGTGATGAA TGCAAGAGACGTTTCTATAAGAACTGGCATAAATCTAAGAAGAAGGCCTTTACCAAGTAC TGCAAGAAATGGCAGGATGAGGATGGCAAGAAGCAGCTGGAGAAGGACTTCAGCAGCATG AAGAAGTACTGCCAAGTCATCTGCGTCATTGCCCACACCCAGATGCAACTGCTTCCTCTG TGCCAGAAGAAGGCCCACCTGATGGAGATCCAGGTGAATGGAGGCACTGTGGCTGAGAAG CTGGACTGGGCTGGCGAGAGGCTCAAGCACCAGGTACCTGTGAACCAAGTGTTTGGGCAG GATGAGATGATCGACGTCATCAGGGTGACCAAGGGCAAAGGCTACAAAAGGGTCACCAGT CGTTGGCACACCAAGAAGCTGCCCCGCAAGACCCACCAAGGCCTGTGCAAGGTGGCCTGT ATTGGGGCATGGCATCCTGCTCGTGTGGGCTTCTCTGTGGATGGCAAGCTGATCAAGAAC AATGCCTCCACTGACTATGACCTGTCTGACAAGAGCATCAACCCTTTGGGTGGCTTCGTC CACTATGGTGAAGTGACCAATGACTTTGTCATGCTGAAAGGCTGTGTGGTGGGAACCAAG AAGTGGGTGCTCACCCTCCGCAAGTCCTTGCTGGTGCAGACAAAGCAGCGGGCTCTGGAG AAGATTGACCTTAAGTTCATTGACACCCCCTCCAAGTTTGGCCATGGCCACTTCCAGACC ATGGAGGAGAAGAAAGCATTCATGGGACCACTCAAGAAAGACCGAATTGCAAAGGAAGAA GGAGCTTAA >chr6_cox_hap1_86|geneid_v1.2_predicted_protein_86|943_AA MGNLMPDSELALGMDVTDFKQQQYYFHSILGPANIKKATGETERLSESLKLRYEEVEIWK KLEEKDKQGEAQWLQQKRQETGREDGSTLAKGSLEIVLDSKDKTQKSNGEKNEKCETKEK GAITAKELYTMMMDKNISLIIMDAQRMQDYQDSCILHSLSVPEEAISPVVTASWIEAHLP DNSIDTWKKRGNVEYMVLLDWFSSAKDLQIRTTLWHLKDALFKWESKTVLCNGPWALVLE GGYKNWFLCYSQYTTNAKVTPPPQHQNEELSISLDFTYPSLEESIPSKPAAEMPPPPIEV DEDIELISDQISDNDQNERTGPLNISIPVESVAASKSDVSPIIQPVPSIKNVPQIDHTKK LAVKLPEEHIIKSERDSGSGKPFKIKGQPETGILRTETFREDTDDTERNKTQREPSIIAR SEEMGRMGHKGEVAEEFGIIMKAPWTGQYRYISPKDLKVTIGKINYQFAGYSQDSQEFFL FLMDGLREDLNKTDNRKTYKEENNDHLNDFKAAEHAWQKHKRLYESIIVALFQGQFKSTV QCLTRHKKSRTLEAFMYLSLLIASTRFDGVMSHRKFSTPRHGSLGFLPWKRSSRHCGKVK SFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVERPPVGIVGCV ETPQGFRTCKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSM KKYCQVICVIAHTQMQLLPLCQKKAHLMEIQVNGGTVAEKLDWAGERLKHQVPVNQVFGQ DEMIDVIRVTKGKGYKRVTSRWHTKKLPRKTHQGLCKVACIGAWHPARVGFSVDGKLIKN NASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKWVLTLRKSLLVQTKQRALE KIDLKFIDTPSKFGHGHFQTMEEKKAFMGPLKKDRIAKEEGA* # Gene 87 (Forward). 2 exons. 108 aa. Score = 1.34 First 2732561 2732646 -0.66 + 0 2 2.25 1.73 6.27 0.00 AA 1: 29 chr6_cox_hap1_87 Terminal 2735151 2735388 2.00 + 1 0 2.65 0.00 14.89 0.00 AA 29:108 chr6_cox_hap1_87 >chr6_cox_hap1_87|geneid_v1.2_predicted_cDNA_87|324_NN ATGCATCGTGTGAATGACAGCTTCATTGTTACTAACTTTGAAAAGACCCCATTTCGAAGA AAAATGGAATTTCAGCTTCTTCAGGGAGACCACTTGTGGAAAAAAAAGACACGAATGTCA GAGGTGAATCCAGGCCCATGGATCCATTGTGGTCAGGGGACTGAAGCCAAGTGGCCCAAC AGTGATGAAGTCTATGAGGCCTTCGTCACCCCAAAGCTCCCTCGATTAGGAGCTGCCTCT TACTGCCATCAGGGACCCCAGGAGCTGGACATGGCATTCTTTGTCATTTCTCATGAGGAG CTGGAGAGGTCCCAGAGCATATAG >chr6_cox_hap1_87|geneid_v1.2_predicted_protein_87|108_AA MHRVNDSFIVTNFEKTPFRRKMEFQLLQGDHLWKKKTRMSEVNPGPWIHCGQGTEAKWPN SDEVYEAFVTPKLPRLGAASYCHQGPQELDMAFFVISHEELERSQSI* # Gene 88 (Reverse). 5 exons. 257 aa. Score = 24.81 Terminal 2771456 2771499 -1.95 - 2 0 0.00 3.36 2.58 0.00 AA 243:257 chr6_cox_hap1_88 Internal 2772080 2772196 1.32 - 2 1 2.79 4.34 5.11 0.00 AA 204:243 chr6_cox_hap1_88 Internal 2773138 2773413 9.34 - 2 1 0.41 -3.93 41.13 0.00 AA 112:204 chr6_cox_hap1_88 Internal 2773660 2773929 14.19 - 2 1 4.10 2.62 37.89 0.00 AA 22:112 chr6_cox_hap1_88 First 2774058 2774121 1.91 - 0 1 4.10 3.31 6.14 0.00 AA 1: 22 chr6_cox_hap1_88 >chr6_cox_hap1_88|geneid_v1.2_predicted_cDNA_88|771_NN ATGGCGCCCCGAACCGTCCTCCTGCTGCTCTCGGCGGCCCTGGCCCTGACCGAGACCTGG GCCGGCTCCCACTCCATGAGGTATTTCGACACCGCCATGTCCCGGCCCGGCCGCGGGGAG CCCCGCTTCATCTCAGTGGGCTACGTGGACGACACGCAGTTCGTGAGGTTCGACAGCGAC GCCGCGAGTCCGAGAGAGGAGCCGCGGGCGCCGTGGATAGAGCAGGAGGGGCCGGAGTAT TGGGACCGGAACACACAGATCTTCAAGACCAACACACAGACTGACCGAGAGAGCCTGCGG AACCTGCGCGGCTACTACAACCAGAGCGAGGCCGGGTCTCACACCCTCCAGAGCATGTAC GGCTGCGACGTGGGGCCGGACGGGCGCCTCCTCCGCGGGCATAACCAGTACGCCTACGAC GGCAAGGATTACATCGCCCTGAACGAGGACCTGCGCTCCTGGACCGCGGCGGACACCGCG GCTCAGATCACCCAGCGCAAGTGGGAGGCGGCCCGTGTGGCGGAGCAGGACAGAGCCTAC CTGGAGGGCACGTGCGTGGAGTGGCTCCGCAGATACCTGGAGAACGGGAAGGACACGCTG GAGCGCGCGGAGCCGTCTTCCCAGTCCACCGTCCCCATCGTGGGCATTGTTGCTGGCCTG GCTGTCCTAGCAGTTGTGGTCATCGGAGCTGTGGTCGCTGCTGTGATGTGTAGGAGGAAG AGCTCAGGCAGCGACAGTGCCCAGGGCTCTGATGTGTCTCTCACAGCTTGA >chr6_cox_hap1_88|geneid_v1.2_predicted_protein_88|257_AA MAPRTVLLLLSAALALTETWAGSHSMRYFDTAMSRPGRGEPRFISVGYVDDTQFVRFDSD AASPREEPRAPWIEQEGPEYWDRNTQIFKTNTQTDRESLRNLRGYYNQSEAGSHTLQSMY GCDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAARVAEQDRAY LEGTCVEWLRRYLENGKDTLERAEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRK SSGSDSAQGSDVSLTA* # Gene 89 (Reverse). 1 exons. 67 aa. Score = 0.98 Single 2783291 2783491 0.98 - 0 0 0.00 4.20 8.64 0.00 AA 1: 67 chr6_cox_hap1_89 >chr6_cox_hap1_89|geneid_v1.2_predicted_cDNA_89|201_NN ATGAGTCGCCCAGGCCATCTTAAACTATTTGTGACAAGGATCATGCAGGACTTTGAAAGT GACACGTTTTTTCCAGAAATTGATTTGGAGAAATATAAAATTCTGCCAGAATATCCAGGC GTTCTCTCGGATGTATTAAGTACAAATTTCAAGTATATGAGAAGAATGATTAATATGAAG GTGTTTTCTGGTTTATTTTAA >chr6_cox_hap1_89|geneid_v1.2_predicted_protein_89|67_AA MSRPGHLKLFVTRIMQDFESDTFFPEIDLEKYKILPEYPGVLSDVLSTNFKYMRRMINMK VFSGLF* # Gene 90 (Forward). 1 exons. 68 aa. Score = 0.02 Single 2796112 2796315 0.02 + 0 0 3.15 0.00 7.82 0.00 AA 1: 68 chr6_cox_hap1_90 >chr6_cox_hap1_90|geneid_v1.2_predicted_cDNA_90|204_NN ATGGCTTCCACCAAAGGGCGTGAGGTCAGCAGTCATAGGGGCAACCAACAGGCAAAGACC CCTGAAAATAGACCCCGCAGGGAAGCACAAGTATTCACTGACGGTGGGAACCCCACAGAT CTGGCTGTCTTCAAGCACATCAGAGAGATTGCCATGAGGAGCAACTTAGCCAGAAAGACT TATTTGCCTCCTCAAAAAGCATAA >chr6_cox_hap1_90|geneid_v1.2_predicted_protein_90|68_AA MASTKGREVSSHRGNQQAKTPENRPRREAQVFTDGGNPTDLAVFKHIREIAMRSNLARKT YLPPQKA* # Gene 91 (Forward). 10 exons. 706 aa. Score = 19.21 First 2808308 2808385 -0.98 + 0 0 1.47 2.98 3.39 0.00 AA 1: 26 chr6_cox_hap1_91 Internal 2828073 2828343 4.51 + 0 1 -0.89 2.43 21.45 0.00 AA 27:117 chr6_cox_hap1_91 Internal 2828931 2829209 3.27 + 2 1 4.46 1.92 11.11 0.00 AA 117:210 chr6_cox_hap1_91 Internal 2858237 2858391 -0.42 + 2 0 2.03 2.16 5.17 0.00 AA 210:261 chr6_cox_hap1_91 Internal 2877061 2877217 1.52 + 0 1 0.95 4.94 7.46 0.00 AA 262:314 chr6_cox_hap1_91 Internal 2894338 2894454 0.17 + 2 1 2.18 2.44 6.01 0.00 AA 314:353 chr6_cox_hap1_91 Internal 2919572 2919826 3.29 + 2 1 4.22 3.89 8.55 0.00 AA 353:438 chr6_cox_hap1_91 Internal 2920098 2920385 2.72 + 2 1 -3.41 2.43 20.77 0.00 AA 438:534 chr6_cox_hap1_91 Internal 2920977 2921255 4.34 + 2 1 4.46 1.92 13.79 0.00 AA 534:627 chr6_cox_hap1_91 Terminal 2934016 2934254 0.79 + 2 0 4.94 0.00 7.05 0.00 AA 627:706 chr6_cox_hap1_91 >chr6_cox_hap1_91|geneid_v1.2_predicted_cDNA_91|2118_NN ATGGCTGGCTTTAAGATTCGAGAAGTAGTGTTTACATCTCAAAAGAGAAGACCGCTCCAC CAGAAATGCAGAATTTTGGAGATTAGGGTCTGTGAGATCCATGAAGACAACAGCACCAGG AGCTCCCAGCATTTCTACTACGATGGGGAGCTCTTCCTCTCCCAAAACCTGGAGACTGAG GAATGGACAGTGCCCCAGTCCTCCAGAGCTCAGACCTTGGCCATGAACGTCAGGAATTTC TTGAAGGAAGATGCCATGAAGACCAAGACACACTATCACGCTATGCATGCAGACTGCCTG CAGGAACTACGGCGATATCTAGAATCCGGCGTAGTCCTGAGGAGAACAGTGCCCCCCATG GTGAATGTCACCCGCAGCGAGGCCTCAGAGGGCAACATCACCGTGACATGCAGGGCTTCC AGCTTCTATCCCCGGAATATCATACTGACCTGGCGTCAGGATGGGGTATCTTTGAGCCAC GACACCCAGCAGTGGGGGGATGTCCTGCCTGATGGGAATGGAACCTACCAGACCTGGGTG GCCACCAGGATTTGCCGAGGAGAGGAGCAGAGGTTCACCTGCTACATGGAACACAGCGGG AATCACAGCACTCACCCTGTGCCCTCTGGTACAATTTACTGCTATGAAAAGGGATTTGAG AATTCCCAGAGGAGCCTTTCAGCCTCTTTGCATGGCTCTTTCTGGCCTTTCAAAAGCGCC AGAGACATCAGAAATGAAATCGTACACACTTATTCGGAGTTTTCCACAATCATTGAAATT TCTATCAGCCAATCAGTGTCGCCGCGGTTCCTGGTTCTAAAGTCCTCGCCGGCCCACCGG GACTCAGATTCTCCCCAGACGCCAAGGTTGCGGGTCATGGAGTCCCGAACCCTCCTCCTG CTGTTCTCGGGAGCCGTGGCCCTGATCCAGACCTGGGCAGAATTCAGTGCTCATTTAGAC CGGGCTAAGACCCTCACACTCAATGGCTGGAGGATCCAAGCTTATGGCATGACTGCCTCT GGAGCATTTCATGCTAGAGAGATCCCAACAGGTGTAGAGCCCCACAGTCTTCGTTACAAC CTCATGGTGCTGTCCCAGGATGGATCTGTGCAGTCAGGGTTTCTCGCTGAGGGACATCTG GATGGTCAGCCCTTCCTGCGCTATGACAGGCAGAAACGCAGGGCAAAGCCCCAGGGACAG TGGGCAGAAGATGTCCTGGGAGCTGAGACCTGGGACACAGAGACCGAGGACTTGACAGAG AATGGGCAAGACCTCAGGAGGACCCTGACTCATATCAAGGACCAGAAAGGAGGCTTGCAT TCCCTCCAGGAGATTAGGGTCTGTGAGATGCATGAAGACAGCAGCACCAGGGGCTCCCGG CATTTCTACTACAATGGGGAGCTCTTCCTCTCCCAAAACCTGGAGACTCAAGAATCGACA GTGCCCCAGTCCTCCAGAGCTCAGACCTTGGCTATGAACGTCACAAATTTCTGGAAGGAA GATGCCATGAAGACCAAGACACACTATCGCGCTATGCAGGCAGACTGCCTGCAGAAACTA CAGCGATATCTGAAATCCGGGGTGGCCATCAGGAGAACAGTGCCCCCCATGGTGAATGTC ACCTGCAGCGAGGTCTCAGAGGGCAACATCACCGTGACATGCAGGGCTTCCAGCTTCTAT CCCCGGAATATCACACTGACCTGGCGTCAGGATGGGGTATCTTTGAGCCACAACACCCAG CAGTGGGGGGATGTCCTGCCTGATGGGAATGGAACCTACCAGACCTGGGTGGCCACCAGG ATTCGCCAAGGAGAGGAGCAGAGGTTCACCTGCTACATGGAACACAGCGGGAATCACGGC ACTCACCCTGTGCCCTCTGATGGACTTGCCACCAGTGCCATTATGGCGTGTGAAGTCACC ACCCTGACACATAAACCCTGGAATAATTCTGTGAAAGGAGGAACATTTATAATCAAATCC TTTCTCTCCAGTGCTCACAGCACGAAAGTTTTCTGCTGTCTTTGGAAACTTGTCTGCAAA CAGCTTGAAGGAGACACAGCCCAAGGGCTCACCATTGACAGCGATGTTGAAGGACACGGT GGGGTTGACCATGGCTGA >chr6_cox_hap1_91|geneid_v1.2_predicted_protein_91|706_AA MAGFKIREVVFTSQKRRPLHQKCRILEIRVCEIHEDNSTRSSQHFYYDGELFLSQNLETE EWTVPQSSRAQTLAMNVRNFLKEDAMKTKTHYHAMHADCLQELRRYLESGVVLRRTVPPM VNVTRSEASEGNITVTCRASSFYPRNIILTWRQDGVSLSHDTQQWGDVLPDGNGTYQTWV ATRICRGEEQRFTCYMEHSGNHSTHPVPSGTIYCYEKGFENSQRSLSASLHGSFWPFKSA RDIRNEIVHTYSEFSTIIEISISQSVSPRFLVLKSSPAHRDSDSPQTPRLRVMESRTLLL LFSGAVALIQTWAEFSAHLDRAKTLTLNGWRIQAYGMTASGAFHAREIPTGVEPHSLRYN LMVLSQDGSVQSGFLAEGHLDGQPFLRYDRQKRRAKPQGQWAEDVLGAETWDTETEDLTE NGQDLRRTLTHIKDQKGGLHSLQEIRVCEMHEDSSTRGSRHFYYNGELFLSQNLETQEST VPQSSRAQTLAMNVTNFWKEDAMKTKTHYRAMQADCLQKLQRYLKSGVAIRRTVPPMVNV TCSEVSEGNITVTCRASSFYPRNITLTWRQDGVSLSHNTQQWGDVLPDGNGTYQTWVATR IRQGEEQRFTCYMEHSGNHGTHPVPSDGLATSAIMACEVTTLTHKPWNNSVKGGTFIIKS FLSSAHSTKVFCCLWKLVCKQLEGDTAQGLTIDSDVEGHGGVDHG* # Gene 92 (Forward). 2 exons. 69 aa. Score = 0.70 First 2943114 2943131 -0.92 + 0 0 3.38 4.01 -0.87 0.00 AA 1: 6 chr6_cox_hap1_92 Terminal 2943693 2943881 1.62 + 0 0 3.18 0.00 11.78 0.00 AA 7: 69 chr6_cox_hap1_92 >chr6_cox_hap1_92|geneid_v1.2_predicted_cDNA_92|207_NN ATGACGTCCCCTCCCAGGGGCCCTGGGACCCACCGCACAGCTGAGCTGGCCCGAGCTGAA GAGTTGTTGGAGCAGCAGCTGGAGCTGTACCAGGCCCTCCTTGAAGGGCAGGAGGGAGCC TGGGAGGCCCAAGCCCTGGTGCTCAAGATCCAGAAGCTGAAGGAACAGATGAGGAGGCAC CAAGAGAGCCTTGGAGGAGGTGCCTAA >chr6_cox_hap1_92|geneid_v1.2_predicted_protein_92|69_AA MTSPPRGPGTHRTAELARAEELLEQQLELYQALLEGQEGAWEAQALVLKIQKLKEQMRRH QESLGGGA* # Gene 93 (Reverse). 4 exons. 181 aa. Score = 14.50 Terminal 2944714 2944872 5.69 - 0 0 0.00 6.11 17.54 0.00 AA 129:181 chr6_cox_hap1_93 Internal 2944999 2945143 4.41 - 1 0 0.81 2.55 18.49 0.00 AA 80:128 chr6_cox_hap1_93 Internal 2945242 2945351 1.74 - 0 2 3.82 1.93 8.23 0.00 AA 44: 80 chr6_cox_hap1_93 First 2946726 2946854 2.66 - 0 0 2.09 0.94 15.98 0.00 AA 1: 43 chr6_cox_hap1_93 >chr6_cox_hap1_93|geneid_v1.2_predicted_cDNA_93|543_NN ATGGAGATCTTCGTGGATGATGAGACGAAGTTGACGCTGCATGGGTTGCAGCAGTACTAC GTGAAACTGAAGGACAACGAGAAGAACCGGAAGCTCTTTGACCTTCTGGATGTCCTTGAG TTCAACCAGGTGGTGATCTTTGTGAAGTCTGTGCAGCGGTGCATTGCCTTGGCCCAGCTA CTAGTGGAGCAGAACTTCCCAGCCATTGCCATCCACCGTGGGATGCCCCAGGAGGAGAGG CTTTCTCGGTATCAGCAGTTTAAAGATTTTCAACGACGAATTCTTGTGGCTACCAACCTA TTTGGCCGAGGCATGGACATCGAGCGGGTGAACATTGCTTTTAATTATGACATGCCTGAG GATTCTGACACCTACCTGCATCGGGTGGCCAGAGCAGGCCGGTTTGGCACCAAGGGCTTG GCTATCACATTTGTGTCCGATGAGAATGATGCCAAGATCCTCAATGATGTGCAGGATCGC TTTGAGGTCAATATTAGTGAGCTGCCTGATGAGATAGACATCTCCTCCTACAGTGAGTAC TGA >chr6_cox_hap1_93|geneid_v1.2_predicted_protein_93|181_AA MEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQL LVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPE DSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYSEY * # Gene 94 (Reverse). 6 exons. 378 aa. Score = 15.69 Terminal 2948565 2948963 -0.55 - 0 0 0.00 0.47 10.40 0.00 AA 246:378 chr6_cox_hap1_94 Internal 2949313 2949431 3.66 - 2 0 0.03 5.62 13.18 0.00 AA 206:245 chr6_cox_hap1_94 Internal 2950446 2950629 4.99 - 0 1 5.20 3.00 14.04 0.00 AA 145:206 chr6_cox_hap1_94 Internal 2952709 2952801 1.15 - 0 0 4.33 1.94 7.34 0.00 AA 114:144 chr6_cox_hap1_94 Internal 2953093 2953220 0.66 - 2 0 1.21 2.99 9.22 0.00 AA 71:113 chr6_cox_hap1_94 First 2954266 2954476 5.79 - 0 1 2.28 0.92 22.17 0.00 AA 1: 71 chr6_cox_hap1_94 >chr6_cox_hap1_94|geneid_v1.2_predicted_cDNA_94|1134_NN ATGGCAGAGAACGATGTGGACAATGAGCTCTTGGACTATGAAGATGATGAGGTGGAGACA GCAGCTGGGGGAGATGGGGCTGAGGCCCCTGCCAAGAAGGATGTCAAGGGCTCCTATGTC TCCATCCACAGCTCTGGCTTTCGTGACTTCCTGCTCAAGCCAGAGTTGCTCCGGGCCATT GTCGACTGTGGCTTTGAGCATCCGTCAGAAGTCCAGCATGAGTGCATCCCTCAGGCCATT CTGGGAATGGATGTCCTGTGCCAGGCCAAGTCGGGCATGGGAAAGACAGCAGTGTTTGTC TTGGCCACACTGCAACAGCTGGAGCCAGTTACTGGGCAGGTGTCTGTGCTGGTGATGTGT CACACTCGGGAGTTGGCTTTTCAGATCAGCAAGGAATATGAGCGCTTCTCTAAATACATG CCCAATGTCAAGGTTGCTGTTTTTTTTGGTGGTCTGTCTATCAAGAAGGATGAAGAGGTG CTGAAGAAGAACTGCCCGCATATCGTCGTGGGGACTCCAGGCCGTATCCTAGCCCTGGCT CGAAATAAGAGCCTCAACCTCAAACACATTAAACACTTTATTTTGGATGAATGTGATAAG ATGCTTGAACAGCTCGACATGCGTCGGGATGTCCAGGAAATTTTTCGCATGACCCCCCAC GAGAAGCAGGTCATGATGTTCAGTGCTACCTTGAGCAAAGAGATCCGTCCAGTCTGCCGC AAGTTCATGCAAGATCCACGCACCCTCAAGGTGGCATCGAGCATACAGCTGGAGCCTTCT GCTCACCAAAACTCCTACTTCCCGGTGGCAGGAGAGCAAGAGAGGGACAGACAGATGGCA GGGCATGTCCAAAAGAAGAGCATCAGCACAAATGAATCCTCCCCTTCCCCACCTCCAGGG GTGGGGGCCTTTGGCACCTCAATCCCCGATACCCTACTCCTTCCCACCCACATCTCCTTG CACCCATCTGGAACCTCGGTTGATGTGAGCCGGCAACAGAGAAGCACCGTGGCGCGGCGA GGGAATGCAGACGGCACCCAGCGGTGGATGGCGGCAGCGGAGGCCGCGGGGAAACCTGAC CAGGAAGCTGAGGACCAAACCAGCCTCTTTTTCCGTTCCCGGTTTTTTTCCTGA >chr6_cox_hap1_94|geneid_v1.2_predicted_protein_94|378_AA MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR KFMQDPRTLKVASSIQLEPSAHQNSYFPVAGEQERDRQMAGHVQKKSISTNESSPSPPPG VGAFGTSIPDTLLLPTHISLHPSGTSVDVSRQQRSTVARRGNADGTQRWMAAAEAAGKPD QEAEDQTSLFFRSRFFS* # Gene 95 (Forward). 1 exons. 108 aa. Score = 1.71 Single 2955839 2956162 1.71 + 0 0 4.10 0.00 10.63 0.00 AA 1:108 chr6_cox_hap1_95 >chr6_cox_hap1_95|geneid_v1.2_predicted_cDNA_95|324_NN ATGGGTGCGGAGAAGCGCAGATGGAAACGGATTGTAGCGAAGGCCAAAGCTTACCTAAAC AGGGAGAGCGCGTATGGCGGCAGCAACAGCGACGAAGGAGGGAAATGTGCCTTCACTTCC GGTTGCAGGCTTCCCTCTACTCCAGCCTCCCGCCTTCTTGGCTGCAAGAGCGCAGGCGCA AGGGACCGGAAACAGGGCCTTCCGCGGTTATACAGATCCGTGCGCTCCAGGCTTGCCTTT GGAAAATGCCTGTCTGAAATTTGTTTTAAAACCGTTTCTAACTTCACTGCTACCGCCAGT AACAAAAGATATAAAGGAAACTAA >chr6_cox_hap1_95|geneid_v1.2_predicted_protein_95|108_AA MGAEKRRWKRIVAKAKAYLNRESAYGGSNSDEGGKCAFTSGCRLPSTPASRLLGCKSAGA RDRKQGLPRLYRSVRSRLAFGKCLSEICFKTVSNFTATASNKRYKGN* # Gene 96 (Reverse). 3 exons. 119 aa. Score = 7.01 Terminal 2959351 2959524 2.22 - 0 0 0.00 4.72 10.96 0.00 AA 62:119 chr6_cox_hap1_96 Internal 2960052 2960152 5.59 - 2 0 4.12 5.84 11.52 0.00 AA 28: 61 chr6_cox_hap1_96 First 2960417 2960498 -0.80 - 0 1 1.23 0.79 7.49 0.00 AA 1: 28 chr6_cox_hap1_96 >chr6_cox_hap1_96|geneid_v1.2_predicted_cDNA_96|357_NN ATGGCCAGTCAGTCCCAAGGTATCCAGCAGCTTCTGCAAGCTGAGAAGCGGGCAGCTGAG AAGGTGGCAGATGCCAGAAAGAGGAAGGCCCGGCGACTGAAGCAGGCAAAGGAGGAGGCA CAGATGGAGGTGGAGCAATACCGCAGAGAGCGAGAGCACGAATTCCAGAGCAAGCAGCAG GCGGCCATGGGCTCCCAGGGGAACCTGTCTGCTGAGGTGGAGCAGGCTACAAGGCGCCAG GTGCAGGGCATGCAGAGCTCCCAGCAGAGAAACCGAGAGCGTGTCCTGGCCCAGCTTCTT GGCATGGTCTGCGACGTCAGGCCCCAGGTCCACCCCAACTACCGGATTTCTGCCTAG >chr6_cox_hap1_96|geneid_v1.2_predicted_protein_96|119_AA MASQSQGIQQLLQAEKRAAEKVADARKRKARRLKQAKEEAQMEVEQYRREREHEFQSKQQ AAMGSQGNLSAEVEQATRRQVQGMQSSQQRNRERVLAQLLGMVCDVRPQVHPNYRISA* # Gene 97 (Forward). 4 exons. 372 aa. Score = 16.93 First 2962113 2962377 3.73 + 0 1 1.01 3.06 15.74 0.00 AA 1: 89 chr6_cox_hap1_97 Internal 2971554 2971775 3.98 + 2 1 2.82 3.93 12.31 0.00 AA 89:163 chr6_cox_hap1_97 Internal 2971948 2972163 3.79 + 2 1 3.61 1.45 14.38 0.00 AA 163:235 chr6_cox_hap1_97 Terminal 2987181 2987593 5.43 + 2 0 3.22 0.00 21.25 0.00 AA 235:372 chr6_cox_hap1_97 >chr6_cox_hap1_97|geneid_v1.2_predicted_cDNA_97|1116_NN ATGGCCTCCACTTCCCGCCGCCAACGCCGAGAACGTCGCTTTCGTCGTTACTTGTCTGCA GGACGGCTGGTCCGGGCCCAGGCCCTCCTCCAGCGACACCCAGGCCTCGATGTAGATGCT GGGCAGCCCCCACCACTGCACCGGGCCTGTGCCCGCCACGATGCCCCTGCCCTGTGCCTG CTGCTTCGGCTCGGGGCTGACCCTGCCCACCAGGACCGCCATGGGGACACGGCACTGCAT GCTGCTGCCCGCCAGGGCCCAGATGCCTACACCGATTTCTTCCTCCCGCTGCTAAGCCGC TGTCCCTCCGCCATGGGAATAAAGAATAAGGATGGGGAGACCCCTGGCCAAATTTTGGGC TGGGGACCCCCCTGGGATTCTGCTGAAGAGGAGGAAGAAGATGATGCCTCCAAGGAGCGG GAATGGAGACAGAAGCTCCAGGGTGAGCTGGAGGACGAGTGGCAGGAAGTCATGGGGAGG TTTGAAGGTGATGCCTCCCATGAAACCCAGGAACCTGAGTCCTTCTCAGCCTGGTCAGAT CGCCTGGCCCGGGAACATGCCCAGAAGTGCCAGCAGCAGCAGCGAGAAGCAGAGGGATCC TGTCGACCCCCACGTGCTGAGGGCTCCAGCCAGAGCTGGCGACAGCAGGAGGAGGAGCAG CGGCTCTTCAGGGAGCGAGCCCGGGCCAAGGAGGAAGAGCTGCGAGACCCCAGCAAGCAG AACTCACTGCTCTGGAGAGCAAACACGGACCGTGCCTTCCTCCAGGATGGTTTCTCCTTG AGCAACAATTCTCTCCTGGTCCCCACCAGTGGCATCTACTTCGTCTACTCCCAGGTGGTC TTCTCTGGGAAAGCCTACTCTCCCAAGGCCACCTCCTCCCCACTCTACCTGGCCCATGAG GTCCAGCTCTTCTCCTCCCAGTACCCCTTCCATGTGCCTCTCCTCAGCTCCCAGAAGATG GTGTATCCAGGGCTGCAGGAACCCTGGCTGCACTCGATGTACCACGGGGCTGCGTTCCAG CTCACCCAGGGAGACCAGCTATCCACCCACACAGATGGCATCCCCCACCTAGTCCTCAGC CCTAGTACTGTCTTCTTTGGAGCCTTCGCTCTGTAG >chr6_cox_hap1_97|geneid_v1.2_predicted_protein_97|372_AA MASTSRRQRRERRFRRYLSAGRLVRAQALLQRHPGLDVDAGQPPPLHRACARHDAPALCL LLRLGADPAHQDRHGDTALHAAARQGPDAYTDFFLPLLSRCPSAMGIKNKDGETPGQILG WGPPWDSAEEEEEDDASKEREWRQKLQGELEDEWQEVMGRFEGDASHETQEPESFSAWSD RLAREHAQKCQQQQREAEGSCRPPRAEGSSQSWRQQEEEQRLFRERARAKEEELRDPSKQ NSLLWRANTDRAFLQDGFSLSNNSLLVPTSGIYFVYSQVVFSGKAYSPKATSSPLYLAHE VQLFSSQYPFHVPLLSSQKMVYPGLQEPWLHSMYHGAAFQLTQGDQLSTHTDGIPHLVLS PSTVFFGAFAL* # Gene 98 (Forward). 4 exons. 234 aa. Score = 15.28 First 2989642 2989827 3.84 + 0 0 2.08 5.16 11.22 0.00 AA 1: 62 chr6_cox_hap1_98 Internal 2990434 2990479 -0.83 + 0 1 4.62 3.26 -1.39 0.00 AA 63: 78 chr6_cox_hap1_98 Internal 2990667 2990714 1.59 + 2 1 7.29 4.02 -0.49 0.00 AA 78: 94 chr6_cox_hap1_98 Terminal 2991016 2991437 10.68 + 2 0 5.26 0.00 31.30 0.00 AA 94:234 chr6_cox_hap1_98 >chr6_cox_hap1_98|geneid_v1.2_predicted_cDNA_98|702_NN ATGAGCACTGAAAGCATGATCCGGGACGTGGAGCTGGCCGAGGAGGCGCTCCCCAAGAAG ACAGGGGGGCCCCAGGGCTCCAGGCGGTGCTTGTTCCTCAGCCTCTTCTCCTTCCTGATC GTGGCAGGCGCCACCACGCTCTTCTGCCTGCTGCACTTTGGAGTGATCGGCCCCCAGAGG GAAGAGTTCCCCAGGGACCTCTCTCTAATCAGCCCTCTGGCCCAGGCAGTCAGATCATCT TCTCGAACCCCGAGTGACAAGCCTGTAGCCCATGTTGTAGCAAACCCTCAAGCTGAGGGG CAGCTCCAGTGGCTGAACCGCCGGGCCAATGCCCTCCTGGCCAATGGCGTGGAGCTGAGA GATAACCAGCTGGTGGTGCCATCAGAGGGCCTGTACCTCATCTACTCCCAGGTCCTCTTC AAGGGCCAAGGCTGCCCCTCCACCCATGTGCTCCTCACCCACACCATCAGCCGCATCGCC GTCTCCTACCAGACCAAGGTCAACCTCCTCTCTGCCATCAAGAGCCCCTGCCAGAGGGAG ACCCCAGAGGGGGCTGAGGCCAAGCCCTGGTATGAGCCCATCTATCTGGGAGGGGTCTTC CAGCTGGAGAAGGGTGACCGACTCAGCGCTGAGATCAATCGGCCCGACTATCTCGACTTT GCCGAGTCTGGGCAGGTCTACTTTGGGATCATTGCCCTGTGA >chr6_cox_hap1_98|geneid_v1.2_predicted_protein_98|234_AA MSTESMIRDVELAEEALPKKTGGPQGSRRCLFLSLFSFLIVAGATTLFCLLHFGVIGPQR EEFPRDLSLISPLAQAVRSSSRTPSDKPVAHVVANPQAEGQLQWLNRRANALLANGVELR DNQLVVPSEGLYLIYSQVLFKGQGCPSTHVLLTHTISRIAVSYQTKVNLLSAIKSPCQRE TPEGAEAKPWYEPIYLGGVFQLEKGDRLSAEINRPDYLDFAESGQVYFGIIAL* # Gene 99 (Reverse). 4 exons. 244 aa. Score = 5.36 Terminal 2994609 2994884 4.93 - 0 0 0.00 -0.78 25.98 0.00 AA 153:244 chr6_cox_hap1_99 Internal 2995430 2995530 -1.36 - 2 0 -0.93 3.95 4.58 0.00 AA 119:152 chr6_cox_hap1_99 Internal 3003678 3004022 5.47 - 2 1 3.59 4.71 13.71 0.00 AA 4:119 chr6_cox_hap1_99 First 3004556 3004565 -3.68 - 0 1 2.02 -0.40 0.87 0.00 AA 1: 4 chr6_cox_hap1_99 >chr6_cox_hap1_99|geneid_v1.2_predicted_cDNA_99|732_NN ATGGCAGAGGGATCCTGTGCTCTCTGGGTGTCCCAGCCCCCTGAGATTCGTACCCTGGAA GGATCCTCTGCCTTCCTGCCCTGCTCCTTCAATGCCAGCCAAGGGAGACTGGCCATTGGC TCCGTCACGTGGTTCCGAGATGAGGTGGTTCCAGGGAAGGAGGTGAGGAATGGAACCCCA GAGTTCAGGGGCCGCCTGGCCCCACTTGCTTCTTCCCGTTTCCTCCATGACCACCAGGCT GAGCTGCACATCCGGGACGTGCGAGGCCATGACGCCAGCATCTACGTGTGCAGAGTGGAG GTGCTGGGCCTTGGTGTCGGGACAGGGAATGGGACTCGGCTGGTGGTGGAGAAAGGGTTT CAGAAGCTGCCAGAGGAGGAGCCAGAAACAGATCTCAGCCCCGGGCTCCCAGCTGCCCAC CTCATAGGTAAGGACCTCCAAGACCTGAATAAGAGTGGCCGCTCGGTCACGCTGCGCAGC TCTCTGTACCGGGCGGGGGGCGCCTACGGGCCGGGCACTCCCGAGCTGCTGCTCGAGGGC GCCGAGACGGTGACTCCAGTGCTGGACCCGGCCAGGAGACAAGGGTACGGGCCTCTCTGG TACACGAGCGTGGGGTTCGGCGGCCTGGTGCAGCTCCGGAGGGGCGAGAGGGTGTACGTC AACATCAGTCACCCCGATATGGTGGACTTCGCGAGAGGGAAGACCTTCTTTGGGGCCGTG ATGGTGGGGTGA >chr6_cox_hap1_99|geneid_v1.2_predicted_protein_99|244_AA MAEGSCALWVSQPPEIRTLEGSSAFLPCSFNASQGRLAIGSVTWFRDEVVPGKEVRNGTP EFRGRLAPLASSRFLHDHQAELHIRDVRGHDASIYVCRVEVLGLGVGTGNGTRLVVEKGF QKLPEEEPETDLSPGLPAAHLIGKDLQDLNKSGRSVTLRSSLYRAGGAYGPGTPELLLEG AETVTPVLDPARRQGYGPLWYTSVGFGGLVQLRRGERVYVNISHPDMVDFARGKTFFGAV MVG* # Gene 100 (Forward). 6 exons. 160 aa. Score = 6.28 First 3006595 3006655 0.24 + 0 1 3.64 0.52 6.88 0.00 AA 1: 21 chr6_cox_hap1_100 Internal 3029423 3029484 0.99 + 2 0 4.64 0.66 7.04 0.00 AA 21: 41 chr6_cox_hap1_100 Internal 3029572 3029638 2.16 + 0 1 3.76 3.70 6.72 0.00 AA 42: 64 chr6_cox_hap1_100 Internal 3030006 3030047 1.15 + 2 1 2.94 2.84 6.71 0.00 AA 64: 78 chr6_cox_hap1_100 Internal 3030246 3030408 2.83 + 2 2 4.51 1.78 10.15 0.00 AA 78:132 chr6_cox_hap1_100 Terminal 3030718 3030802 -1.10 + 1 0 2.94 0.00 5.34 0.00 AA 132:160 chr6_cox_hap1_100 >chr6_cox_hap1_100|geneid_v1.2_predicted_cDNA_100|480_NN ATGAGCAACAGCATCCAGGCCATGTCGGAAGATGTCCCAGTTGGCGAAGGGGATCTGAGC AGAGGAAAAGCTTTCGGACTGCTGAAGGCCCAGCAGGAAGAGAGGCTGGATGAGATCAAC AAGCAATTCCTAGACGATCCCAAATATAGCAGTGATGAGGATCTGCCCTCCAAACTGGAA GGCTTCAAAGAGAAATACATGGAGTTTGACCTTAATGGAAATGGCGATATTGATATCATG TCCCTGAAACGAATGCTGGAGAAACTTGGAGTCCCCAAGACTCACCTAGAGCTAAAGAAA TTAATTGGAGAGGTGTCCAGTGGCTCCGGGGAGACGTTCAGCTACCCTGACTTTCTCAGG ATGATGCTGGGCAAGAGATCTGCCATCCTAAAAATGATCCTGATGTATGAGGAAAAAGCG AGAGAAAAGGAAAAGCCAACAGGCCCCCCAGCCAAGAAAGCTATCTCTGAGTTGCCCTGA >chr6_cox_hap1_100|geneid_v1.2_predicted_protein_100|160_AA MSNSIQAMSEDVPVGEGDLSRGKAFGLLKAQQEERLDEINKQFLDDPKYSSDEDLPSKLE GFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLR MMLGKRSAILKMILMYEEKAREKEKPTGPPAKKAISELP* # Gene 101 (Forward). 13 exons. 1254 aa. Score = 28.50 First 3036688 3036799 1.25 + 0 1 3.64 2.01 7.16 0.00 AA 1: 38 chr6_cox_hap1_101 Internal 3037631 3037808 2.09 + 2 2 4.74 0.83 9.37 0.00 AA 38: 97 chr6_cox_hap1_101 Internal 3039070 3039213 0.67 + 1 2 3.15 2.57 5.60 0.00 AA 97:145 chr6_cox_hap1_101 Internal 3039919 3040061 2.94 + 1 1 4.56 5.66 4.51 0.00 AA 145:193 chr6_cox_hap1_101 Internal 3040671 3040761 2.09 + 2 2 4.03 0.89 10.34 0.00 AA 193:223 chr6_cox_hap1_101 Internal 3040881 3041097 -0.66 + 1 0 1.88 1.45 5.85 0.00 AA 223:295 chr6_cox_hap1_101 Internal 3041664 3042138 8.31 + 0 1 0.92 2.74 27.78 0.00 AA 296:454 chr6_cox_hap1_101 Internal 3044491 3044701 1.52 + 2 2 5.40 4.73 1.11 0.00 AA 454:524 chr6_cox_hap1_101 Internal 3045039 3046819 6.05 + 1 1 5.77 1.20 17.16 0.00 AA 524:1118 chr6_cox_hap1_101 Internal 3047759 3047889 0.72 + 2 0 5.11 4.60 -0.25 0.00 AA 1118:1161 chr6_cox_hap1_101 Internal 3049294 3049365 2.69 + 0 0 4.11 5.88 4.26 0.00 AA 1162:1185 chr6_cox_hap1_101 Internal 3049867 3049949 0.78 + 0 2 5.09 4.36 0.27 0.00 AA 1186:1213 chr6_cox_hap1_101 Terminal 3051134 3051257 0.07 + 1 0 4.67 0.00 5.67 0.00 AA 1213:1254 chr6_cox_hap1_101 >chr6_cox_hap1_101|geneid_v1.2_predicted_cDNA_101|3762_NN ATGTCCGATCGCTCGGGGCCGACTGCCAAGGGAAAGGATGGAAAGAAGTATTCCTCGCTC AACCTGTTTGATACGTATAAGGGCAAGTCCTTAGAGATCCAGAAACCCGCTGTTGCCCCT CGCCATGGCCTGCAGAGTCTCGGGAAAGTTGCCATTGCCCGGCGTATGCCACCTCCAGCC AACCTTCCAAGCCTGAAAGCCGAGAACAAAGGCAATGACCCCAATGTCTCACTAGTGCCA AAAGACGGAACAGGATGGGCAAGCAAACAGGAGCAGTCCGACCCCAAGAGGTGGAAGGGC ATCAAGCCTACTGTCACGATTCTCTCGAGAGGAATTTCCGACCCTGCAGGCGGCTGGCGA CCAGGACAAGGCTGCCAAGGAAAGGGAGTCTGCCGAACAGTCGTCTGGGCCCGGACCAAG CCTCCGCCCCCAAACCGTTTTCCCCGTGTGGCGGGCCCCCGAGGCTCAGGGCCACCAATG CGCTTAGTAGAGCCTGTGGGTCGTCCCTCTATTCTCAAAGAGGATAATCTCAAAGAGTTT GATCAGTTGGATCAGGAGAATGATGATGGTTGGGCAGGGGCCCATGAAGAGGTTGACTAC ACTGAAAAGCTCAAGTTCAGCGATGAGGAAGATGGGCGAGACTCTGATGAGGAGGGAGCT GAGGGCCACAGGGATTCCCAATCAGCTTCTGGTGAGGAACGGCCCCCTGAAGCAGATGGC AAAAAGGGCAACTCCCCCAACAGCGAACCGCCCACTCCTAAGACGGCCTGGGCAGAAACC TCTCGGCCTCCAGAGACAGAGCCGGGACCTCCTGCCCCAAAGCCTCCCCTACCCCCACCT CACCGGGGCCCCGCCGGGAACTGGGGCCCCCCTGGGGACTACCCAGATCGTGGGGGTCCT CCCTGCAAGCCCCCAGCACCTGAAGATGAGGATGAGGCATGGCGGCAGCGACGAAAGCAG TCGTCATCTGAGATTTCCCTGGCAGTGGAGCGGGCCCGGCGACGGCGAGAAGAAGAGGAG CGGCGCATGCAAGAAGAGCGCCGGGCAGCCTGTGCTGAGAAGCTCAAGCGACTCGATGAA AAGTTTGGGGCACCTGACAAGCGGCTCAAAGCAGAGCCTGCTGCCCCACCTGCTGCCCCT TCTACCCCAGCTCCACCACCTGCAGTCCCTAAAGAACTCCCTGCACCTCCAGCTCCACCT CCAGCATCAGCCCCAACACCAGAGAAAGAACCTGAAGAGCCAGCACAGGCCCCTCCTGCC CAATCTACTCCTACTCCAGGTGTGGCTGCGGCTCCCACTCTGGTGAGTGGTGGTGGCAGT ACCAGTAGCACCAGCAGTGGCAGCTTCGAAGCCAGCCCAGGCCTAGTTCCCCGAGAGCGT TCAGACAGTGGGGGCTCAAGCTCAGAGCCATTTGACCGTCATGCACCTGCTATGTTACGG GAACGGGGCACTCCACCGGTGGATCCAAAGTTGGCCTGGGTGGGAGATGTCTTCACCGCC ACACCCGCTGAACCCCGCCCACTTACCTCACCTCTGCGCCAGGCTGCGGATGAGGATGAC AAGGGGATGAGGAGCGAGACTCCTCCAGTACCTCCCCCACCACCCTATCTGGCCAGTTAT CCAGGCTTTCCTGAGAATGGAGCCCCTGGGCCCCCAATCTCTCGCTTTCCTCTGGAGGAA CCAGGGCCCCGTCCACTCCCCTGGCCCCCAGGCAGTGATGAAGTGGCCAAGATACAAACT CCACCACCCAAGAAGGAGCCCCCTAAGGAGGAGACTGCACAGCTGACGGGGCCAGAAGCA GGCCGAAAGCCTGCCCGCGGAGTCGGGAGTGGAGGCCAGGGCCCCCCACCACCACGCAGA GAGAGTCGCACAGAGACCCGCTGGGGCCCTCGTCCAGGGAGCAGTCGTCGTGGAATCCCT CCAGAGGAGCCAGGGGCCCCACCCCGCCGGGCTGGGCCTATAAAGAAACCTCCACCACCT ACAAAAGTAGAAGAGCTGCCTCCCAAGCCCCTCGAACAGGGGGATGAAACCCCCAAACCC CCAAAGCCAGACCCACTCAAGATAACCAAGGGGAAGCTAGGGGGCCCCAAGGAGACCCCA CCCAATGGAAATCTTTCCCCTGCCCCAAGGCTTCGGAGGGACTATTCGTATGAAAGAGTG GGTCCTACCTCTTGCCGGGGTCGGGGCCGAGGCGAGTATTTTGCCAGAGGGAGGGGTTTT CGGGGGACCTATGGGGGACGAGGGCGGGGAGCCCGAAGCCGGGAATTCCGCAGTTACCGA GAGTTTCGAGGAGATGATGGGCGTGGAGGTGGGACAGGGGGACCAAACCACCCTCCTGCT CCCCGAGGCCGCACTGCCAGCGAGACACGGAGCGAGGGTTCAGAGTATGAGGAAATCCCC AAGCGGCGCCGGCAGCGGGGCTCAGAAACAGGCAGCGAGACCCATGAGAGTGATCTGGCT CCTTCAGACAAGGAGGCTCCCACACCCAAGGAGGGAACACTCACCCAGGTCCCTCTCGCT CCCCCACCACCAGGAGCCCCACCTTCACCAGCCCCAGCCCGCTTCACTGCCCGGGGTGGG CGAGTCTTCACTCCCAGAGGGGTGCCATCTCGCCGGGGCCGAGGAGGAGGGAGGCCCCCT CCTCAAGTTTGCCCAGGCTGGAGCCCTCCAGCCAAGTCTCTGGCTCCCAAGAAACCTCCC ACAGGCCCTTTGCCACCAAGTAAGGAGCCTTTGAAAGAGAAGTTGATCCCAGGGCCTCTG TCCCCTGTGGCGCGCGGAGGCAGCAATGGAGGTAGCAATGTGGGCATGGAAGATGGGGAG CGACCCCGAAGGAGGCGACATGGGAGGGCTCAGCAGCAGGATAAACCGCCTCGTTTCCGG AGGCTGAAGCAGGAACGGGAGAATGCCGCAAGGGGGTCTGAGGGCAAGCCCTCCCTAACC CTTCCAGCCTCCGCTCCTGGACCTGAGGAGGCCCTCACAACAGTCACAGTGGCCCCAGCA CCTCGCCGGGCAGCTGCCAAGTCTCCTGATCTGTCAAACCAGAACTCAGACCAAGCCAAT GAGGAATGGGAGACTGCATCAGAGAGCAGTGACTTCACCAGTGAGCGCCGAGGGGACAAA GAGGCACCCCCACCAGTACTGCTGACACCCAAGGCTGTGGGAACTCCTGGGGGAGGTGGA GGTGGAGCCGTACCAGGTATTTCAGCCATGTCCCGCGGAGATCTGAGCCAGAGAGCCAAG GATTTGAGTAAACGGAGCTTCTCAAGTCAGCGGCCAGGCATGGAACGGCAGAATCGGCGC CCTGGCCCAGGGGGCAAGGCTGGCAGCAGTGGCAGCAGCAGTGGAGGAGGCGACCCCCAC TTTGAGGAGCCGGGGCCAATGGTGAGAGGGGTGGGTGGGACTCCTCGGGACTCTGCCGGG GTTAGTCCCTTTCCCCCTAAACGTCGGGAGCGGCCTCCCAGAAAACCAGAGCTGCTACAG GAGGACTCAGACTTACGCCTAGTGGTAGGAGACAGCTTGAAAGCAGAGAAGGAGCTAACA GCATCAGTCACTGAGATCTCTGGGGGAGCCATGGACTCTCAGTTACATCCAAACAGTGGA GGCTTCCGCCCTGGGACACCCTCACTGCACCCTTACAGGTCCTTCTCTGGCCTCAATTCC CGTCTCAAGGCCACGCCTTCCACCTACAGTGGAGTCTTCCGCACCCAGCGCGTCGACCTT TACCAGCAGGTGAAGGAGAAACCCTTGTGGCCCCAACTCTAA >chr6_cox_hap1_101|geneid_v1.2_predicted_protein_101|1254_AA MSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGLQSLGKVAIARRMPPPA NLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKRWKGIKPTVTILSRGISDPAGGWR PGQGCQGKGVCRTVVWARTKPPPPNRFPRVAGPRGSGPPMRLVEPVGRPSILKEDNLKEF DQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAEGHRDSQSASGEERPPEADG KKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPHRGPAGNWGPPGDYPDRGGP PCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEERRMQEERRAACAEKLKRLDE KFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPPASAPTPEKEPEEPAQAPPA QSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPGLVPRERSDSGGSSSEPFDRHAPAMLR ERGTPPVDPKLAWVGDVFTATPAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPPYLASY PGFPENGAPGPPISRFPLEEPGPRPLPWPPGSDEVAKIQTPPPKKEPPKEETAQLTGPEA GRKPARGVGSGGQGPPPPRRESRTETRWGPRPGSSRRGIPPEEPGAPPRRAGPIKKPPPP TKVEELPPKPLEQGDETPKPPKPDPLKITKGKLGGPKETPPNGNLSPAPRLRRDYSYERV GPTSCRGRGRGEYFARGRGFRGTYGGRGRGARSREFRSYREFRGDDGRGGGTGGPNHPPA PRGRTASETRSEGSEYEEIPKRRRQRGSETGSETHESDLAPSDKEAPTPKEGTLTQVPLA PPPPGAPPSPAPARFTARGGRVFTPRGVPSRRGRGGGRPPPQVCPGWSPPAKSLAPKKPP TGPLPPSKEPLKEKLIPGPLSPVARGGSNGGSNVGMEDGERPRRRRHGRAQQQDKPPRFR RLKQERENAARGSEGKPSLTLPASAPGPEEALTTVTVAPAPRRAAAKSPDLSNQNSDQAN EEWETASESSDFTSERRGDKEAPPPVLLTPKAVGTPGGGGGGAVPGISAMSRGDLSQRAK DLSKRSFSSQRPGMERQNRRPGPGGKAGSSGSSSGGGDPHFEEPGPMVRGVGGTPRDSAG VSPFPPKRRERPPRKPELLQEDSDLRLVVGDSLKAEKELTASVTEISGGAMDSQLHPNSG GFRPGTPSLHPYRSFSGLNSRLKATPSTYSGVFRTQRVDLYQQVKEKPLWPQL* # Gene 102 (Reverse). 20 exons. 1090 aa. Score = 42.08 Terminal 3053030 3053125 2.21 - 0 0 0.00 5.17 10.26 0.00 AA 1059:1090 chr6_cox_hap1_102 Internal 3053400 3053546 0.25 - 0 0 -0.12 3.80 7.61 0.00 AA 1010:1058 chr6_cox_hap1_102 Internal 3054099 3054206 3.21 - 0 0 1.06 7.17 8.16 0.00 AA 974:1009 chr6_cox_hap1_102 Internal 3054692 3054838 0.87 - 0 0 4.38 4.57 1.24 0.00 AA 925:973 chr6_cox_hap1_102 Internal 3055004 3055128 1.53 - 2 0 0.48 5.48 7.39 0.00 AA 883:924 chr6_cox_hap1_102 Internal 3055220 3055322 0.69 - 0 1 1.36 3.74 6.58 0.00 AA 849:883 chr6_cox_hap1_102 Internal 3055439 3055492 1.10 - 0 0 1.47 6.53 3.25 0.00 AA 831:848 chr6_cox_hap1_102 Internal 3055676 3055845 0.70 - 2 0 1.50 4.95 4.58 0.00 AA 774:830 chr6_cox_hap1_102 Internal 3056012 3056303 1.67 - 0 1 2.80 4.67 5.47 0.00 AA 677:774 chr6_cox_hap1_102 Internal 3056729 3056748 -0.55 - 2 0 4.94 1.24 1.85 0.00 AA 670:676 chr6_cox_hap1_102 Internal 3058848 3059100 4.96 - 0 1 3.93 5.62 10.58 0.00 AA 586:670 chr6_cox_hap1_102 Internal 3059309 3059506 3.09 - 0 0 2.19 1.72 14.34 0.00 AA 520:585 chr6_cox_hap1_102 Internal 3060296 3060425 2.80 - 1 0 0.41 2.70 14.82 0.00 AA 476:519 chr6_cox_hap1_102 Internal 3061493 3061728 1.39 - 0 2 1.25 3.29 9.16 0.00 AA 398:476 chr6_cox_hap1_102 Internal 3062580 3062654 2.35 - 0 0 5.88 3.26 4.67 0.00 AA 373:397 chr6_cox_hap1_102 Internal 3062814 3062867 1.50 - 0 0 1.52 4.46 7.28 0.00 AA 355:372 chr6_cox_hap1_102 Internal 3063102 3063298 -1.29 - 2 0 0.43 4.85 1.35 0.00 AA 289:354 chr6_cox_hap1_102 Internal 3063413 3063530 3.75 - 0 1 1.39 5.23 11.94 0.00 AA 250:289 chr6_cox_hap1_102 Internal 3065559 3065679 4.60 - 1 0 3.65 5.10 10.87 0.00 AA 209:249 chr6_cox_hap1_102 First 3077757 3078382 7.25 - 0 2 3.53 4.72 18.25 0.00 AA 1:209 chr6_cox_hap1_102 >chr6_cox_hap1_102|geneid_v1.2_predicted_cDNA_102|3270_NN ATGTCCCGGCCCTTGCTCATCACCTTCACCCCAGCCACTGACCCCAGCGACCTCTGGAAG GATGGGCAGCAGCAGCCACAGCCCGAGAAGCCAGAGTCCACCCTGGATGGGGCTGCAGCC CTAGCTTTCTATGAGGCCCTGATTGGGGATGAGAGCAGCGCTCCTGACTCCCAGAGATCT CAGACTGAACCTGCCAGAGAAAGAAAGAGAAAGAAAAGAAGAATAATGAAGGCACCAGCA GCAGAAGCAGTGGCAGAAGGAGCATCAGGAAGACATGGACAAGGGAGATCCCTTGAGGCT GAGGATAAGATGACTCACCGGATACTGAGGGCAGCCCAGGAGGGGGACCTGCCAGAACTT AGGAGACTGCTGGAACCGCATGAGGCAGGAGGAGCTGGGGGGAATATCAACGCCCGGGAT GCCTTCTGGTGGACCCCACTGATGTGTGCTGCTCGAGCGGGCCAGGGGGCAGCTGTGAGC TATCTCCTGGGCCGTGGGGCTGCCTGGGTGGGGGTCTGTGAGCTGAGTGGCAGGGATGCG GCTCAGCTCGCTGAAGAAGCTGGCTTCCCTGAGGTAGCCCGCATGGTCAGGGAGAGCCAT GGAGAGACAAGGAGCCCGGAAAACCGAGACCTGTCGGCCATGGAGCCTAATGATAGTACC AGTACCGCTGTGGAGGAGCCTGACAGCTTGGAGGTGTTGGTGAAGACCTTGGACTCTCAA ACTCGTACCTTTATTGTGGGGGCCCAGATGAATGTAAAAGAGTTTAAGGAGCACATTGCT GCCTCTGTCAGCATCCCATCTGAAAAACAACGGCTCATTTACCAGGGACGAGTTCTGCAA GATGATAAGAAGCTTCAGGAATACAATGTTGGGGGAAAGGTTATCCACCTGGTGGAACGG GCTCCTCCTCAGACTCACCTCCCTTCTGGGGCATCTTCTGGGACGGGGTCTGCCTCAGCC ACTCATGGTGGGGGATCCCCCCCTGGTACTCGGGGGCCTGGGGCCTCTGTTCATGACCGG AATGCCAACAGCTATGTCATGGTTGGAACCTTCAATCTTCCTAGTGACGGCTCTGCTGTG GATGTTCACATCAACATGGAACAGGCCCCGATTCAGAGTGAGCCCCGGGTACGGCTGGTG ATGGCTCAGCACATGATCAGGGATATACAGACCTTACTATCCCGGATGGAGTGTCGAGGA GGGCCCCAACCGCAGCACAGTCAGCCGCCCCCGCAGCCACCGGCTGTGACCCCGGAGCCA GTAGCCTTGAGCTCTCAAACATCAGAACCAGTTGAAAGTGAAGCACCTCCCCGGGAGCCC ATGGAGGCAGAAGAAGTGGAGGAGCGTGCCCCAGCCCAGAACCCGGAGCTCACTCCTGGC CCAGCCCCAGCGGGCCCAACACCTGCCCCGGAAACAAATGCACCCAACCATCCTTCCCCT GCGGAGTATGTCGAGGTGCTCCAGGAGCTACAGCGGCTGGAGAGTCGCCTCCAGCCCTTC TTGCAGCGCTACTACGAGGTTCTGGGTGCTGCTGCCACCACGGACTACAATAACAATCAC GAGGGCCGGGAGGAGGATCAGCGGTTGATCAACTTGGTAGGGGAGAGCCTGCGACTGCTG GGCAACACCTTTGTTGCACTGTCTGACCTGCGCTGCAATCTGGCCTGCACGCCCCCACGA CACCTGCATGTGGTCCGGCCTATGTCTCACTACACCACCCCCATGGTGCTCCAGCAGGCA GCCATTCCCATACAGATCAATGTGGGAACCACTGTGACCATGACAGGAAATGGGACTCGG CCCCCCCCAACTCCCAATGCAGAGGCACCTCCCCCTGGTCCTGGGCAGGCCTCATCCGTG GCTCCGTCTTCTACCAATGTCGAGTCCTCAGCTGAGGGGGCTCCCCCGCCAGGTCCAGCT CCCCCGCCAGCCACCAGCCACCCGAGGGTCATCCGGATTTCCCACCAGAGTGTGGAACCC GTGGTCATGATGCACATGAACATTCAAGGCATGACTGACTTCTTGCAGGCAACACAGACA GCCCCTCCACCACCCCCACCTCCTCCACCCCCACCACCTGCCCCAGAGCAGCAGACCATG CCCCCACCAGGCTCCCCTTCTGGTGGCGCAGGGAGTCCTGGAGGCCTGGGTCTTGAGAGC CTGTCACCGGAGTTTTTTACCTCAGTGGTGCAGGGTGTGCTCAGCTCCCTGCTGGGCTCC CTGGGGGCTCGGGCTGGCAGCAGTGAAAGTATTGCTGCCTTCATACAACGCCTCAGTGGA TCCAGCAACATCTTTGAGCCTGGAGCTGATGGGGCCCTTGGATTCTTTGGGGCCTTGCTT TCTCTTCTGTGCCAGAACTTCTCTATGGTGGACGTAGTGATGCTTCTCCATGGGCATTTC CAGCCACTACAACGGCTCCAGCCCCAGCTGCGATCCTTCTTCCACCAGCACTACCTGGGT GGTCAGGAGCCCACACCCAGTAACATCCGGATGGCAACCCACACATTGATCACGGGGCTA GAAGAGTATGTGCGGGAGAGTTTTTCCTTGGTGCAGGTTCAGCCAGGTGTGGACATCATC CGGACAAACCTGGAATTTCTCCAAGAGCAGTTTAATAGCATTGCTGCGCATGTGCTGCAT TGCACAGATAGTGGATTTGGGGCCCGGTTGCTGGAGTTGTGTAACCAAGGCCTGTTTGAA TGCCTGGCCCTAAACCTGCACTGCTTGGGGGGACAGCAGATGGAGCTTGCTGCTGTTATC AATGGCCGAATTCGTCGTATGTCTCGTGGGGTGAATCCCTCCTTGGTGAGCTGGCTGACC ACTATGATGGGACTGAGGCTTCAGGTGGTACTGGAGCACATGCCTGTAGGCCCTGATGCC ATTCTCAGATACGTTCGCAGGGTTGGTGATCCCCCCCAGGAATGGGTCCCTATTATCCAG CAGGACATTCAGAGCCAGCGGAAGGTGAAACCGCAGCCCCCTCTGAGTGATGCCTACCTC AGTGGTATGCCTGCCAAGAGACGCAAGACGATGCAGGGTGAGGGCCCCCAGCTGCTTCTC TCAGAGGCTGTGAGCCGGGCAGCTAAGGCAGCCGGAGCTCGGCCCCTGACGAGCCCCGAG AGCCTGAGCCGGGACCTGGAGGCACCAGAGGTTCAGGAGAGCTACAGGCAGCAGCTCCGG TCTGATATACAAAAACGACTGCAGGAAGACCCCAACTACAGTCCCCAGCGCTTCCCCAAT GCCCAGCGGGCCTTTGCTGATGATCCTTAG >chr6_cox_hap1_102|geneid_v1.2_predicted_protein_102|1090_AA MSRPLLITFTPATDPSDLWKDGQQQPQPEKPESTLDGAAALAFYEALIGDESSAPDSQRS QTEPARERKRKKRRIMKAPAAEAVAEGASGRHGQGRSLEAEDKMTHRILRAAQEGDLPEL RRLLEPHEAGGAGGNINARDAFWWTPLMCAARAGQGAAVSYLLGRGAAWVGVCELSGRDA AQLAEEAGFPEVARMVRESHGETRSPENRDLSAMEPNDSTSTAVEEPDSLEVLVKTLDSQ TRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVGGKVIHLVER APPQTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAV DVHINMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRGGPQPQHSQPPPQPPAVTPEP VALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAPETNAPNHPSP AEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHEGREEDQRLINLVGESLRLL GNTFVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTR PPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEP VVMMHMNIQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLES LSPEFFTSVVQGVLSSLLGSLGARAGSSESIAAFIQRLSGSSNIFEPGADGALGFFGALL SLLCQNFSMVDVVMLLHGHFQPLQRLQPQLRSFFHQHYLGGQEPTPSNIRMATHTLITGL EEYVRESFSLVQVQPGVDIIRTNLEFLQEQFNSIAAHVLHCTDSGFGARLLELCNQGLFE CLALNLHCLGGQQMELAAVINGRIRRMSRGVNPSLVSWLTTMMGLRLQVVLEHMPVGPDA ILRYVRRVGDPPQEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRKTMQGEGPQLLL SEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPN AQRAFADDP* # Gene 103 (Forward). 6 exons. 216 aa. Score = 11.68 First 3080736 3080807 -1.41 + 0 0 2.22 2.19 2.35 0.00 AA 1: 24 chr6_cox_hap1_103 Internal 3081772 3081874 4.14 + 0 1 3.55 2.33 14.03 0.00 AA 25: 59 chr6_cox_hap1_103 Internal 3082443 3082558 3.97 + 2 0 1.26 2.54 16.72 0.00 AA 59: 97 chr6_cox_hap1_103 Internal 3083001 3083076 0.67 + 0 1 2.34 3.89 4.83 0.00 AA 98:123 chr6_cox_hap1_103 Internal 3083223 3083412 4.04 + 2 2 1.43 2.79 16.26 0.00 AA 123:186 chr6_cox_hap1_103 Terminal 3083740 3083830 0.27 + 1 0 1.86 0.00 10.39 0.00 AA 186:216 chr6_cox_hap1_103 >chr6_cox_hap1_103|geneid_v1.2_predicted_cDNA_103|648_NN ATGAGCAGCTCAGAGGAGGTGTCCTGGATTTCCTGGTTCTGTGGGCTCCGTGGCAATGAA TTCTTCTGTGAAGTGGATGAAGACTACATCCAGGACAAATTTAATCTTACTGGACTCAAT GAGCAGGTCCCTCACTATCGACAAGCTCTAGACATGATCTTGGACCTGGAGCCTGATGAA GAACTGGAAGACAACCCCAACCAGAGTGACCTGATTGAGCAGGCAGCCGAGATGCTTTAT GGATTGATCCACGCCCGCTACATCCTTACCAACCGTGGCATCGCCCAGATGTTGGAAAAG TACCAGCAAGGAGACTTTGGTTACTGTCCTCGTGTGTACTGTGAGAACCAGCCAATGCTT CCCATTGGCCTTTCAGACATCCCAGGTGAAGCCATGGTGAAGCTCTACTGCCCCAAGTGC ATGGATGTGTACACACCCAAGTCATCAAGACACCATCACACGGATGGCGCCTACTTCGGC ACTGGTTTCCCTCACATGCTCTTCATGGTGCATCCCGAGTACCGGCCCAAGAGACCTGCC AACCAGTTTGTGCCCAGGCTCTACGGTTTCAAGATCCATCCGATGGCCTACCAGCTGCAG CTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGCTGA >chr6_cox_hap1_103|geneid_v1.2_predicted_protein_103|216_AA MSSSEEVSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDE ELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQPML PIGLSDIPGEAMVKLYCPKCMDVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPA NQFVPRLYGFKIHPMAYQLQLQAASNFKSPVKTIR* # Gene 104 (Forward). 3 exons. 202 aa. Score = 5.40 First 3084855 3084912 -1.36 + 0 1 0.79 4.01 1.91 0.00 AA 1: 20 chr6_cox_hap1_104 Internal 3085060 3085188 1.84 + 2 1 4.02 1.56 8.73 0.00 AA 20: 63 chr6_cox_hap1_104 Terminal 3085768 3086186 4.92 + 2 0 4.54 0.00 17.98 0.00 AA 63:202 chr6_cox_hap1_104 >chr6_cox_hap1_104|geneid_v1.2_predicted_cDNA_104|606_NN ATGAAGGTCCATATGCTTGTAGGTGTGCTGGTCATGGTGGGCTTCACAGTAGGAAAGGTT CCTGTTCCCGACATCCGGACGTGCCACTTCTGCCTCGTAGAAGACCCTTCTGTAGGATGC ATTTCAGGCTCAGAGAAGTGTACCATCAGCAGCTCATCCCTGTGCATGGTGATCACCATC TATTATGATGTCAAGGTTCGCTTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGC TGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAG TACGATTATTGCAACTCCTGGTCAAGCCCCCAACTCCAGAGCTCTCTGCCGGAGCCCCAT GACAGGCCCCTGGCCCTGCCTCTGTCTGACTCCCAGATTCAGTGGTTCTACCAGGCCCTG AACCTCTCCCTGCCCCTCCCCAATTTCCATGCTGGGACGGAGCCTGATGGCCTGGACCCC ATGGTCACACTGTCCCTGAACCTGGGCTTGTCTTTTGCTGAGCTGCGCCGCATGTACTTG TTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCT TCCTGA >chr6_cox_hap1_104|geneid_v1.2_predicted_protein_104|202_AA MKVHMLVGVLVMVGFTVGKVPVPDIRTCHFCLVEDPSVGCISGSEKCTISSSSLCMVITI YYDVKVRFIVRGCGQYISYRCQEKRNTYFAEYWYQAQCCQYDYCNSWSSPQLQSSLPEPH DRPLALPLSDSQIQWFYQALNLSLPLPNFHAGTEPDGLDPMVTLSLNLGLSFAELRRMYL FLNSSGLLVLPQAGLLTPHPS* # Gene 105 (Reverse). 17 exons. 518 aa. Score = 30.80 Terminal 3090861 3091024 0.49 - 2 0 0.00 3.68 8.21 0.00 AA 464:518 chr6_cox_hap1_105 Internal 3101727 3101803 0.83 - 1 1 3.93 4.57 1.83 0.00 AA 438:464 chr6_cox_hap1_105 Internal 3101944 3102006 2.73 - 1 2 3.92 2.42 9.80 0.00 AA 417:438 chr6_cox_hap1_105 Internal 3102152 3102208 1.79 - 1 2 2.71 2.47 9.22 0.00 AA 398:417 chr6_cox_hap1_105 Internal 3102626 3102689 0.70 - 2 2 3.66 3.68 3.24 0.00 AA 377:398 chr6_cox_hap1_105 Internal 3102918 3103022 0.42 - 2 1 1.39 1.17 9.71 0.00 AA 342:377 chr6_cox_hap1_105 Internal 3103484 3103607 6.04 - 0 1 0.04 6.20 18.23 0.00 AA 301:342 chr6_cox_hap1_105 Internal 3103981 3104030 -0.59 - 2 0 3.32 3.63 0.61 0.00 AA 284:300 chr6_cox_hap1_105 Internal 3104442 3104505 0.95 - 0 1 2.82 5.63 2.17 0.00 AA 263:284 chr6_cox_hap1_105 Internal 3105482 3105583 1.05 - 0 0 2.72 0.99 9.56 0.00 AA 229:262 chr6_cox_hap1_105 Internal 3105707 3105821 3.86 - 1 0 4.21 4.96 8.40 0.00 AA 190:228 chr6_cox_hap1_105 Internal 3106930 3107052 1.99 - 1 2 1.70 5.32 6.95 0.00 AA 149:190 chr6_cox_hap1_105 Internal 3107262 3107335 1.20 - 0 2 3.15 2.38 7.20 0.00 AA 125:149 chr6_cox_hap1_105 Internal 3110850 3110935 5.21 - 2 0 3.71 4.98 12.51 0.00 AA 96:124 chr6_cox_hap1_105 Internal 3114846 3114932 1.49 - 2 1 4.30 5.65 1.30 0.00 AA 67: 96 chr6_cox_hap1_105 Internal 3115178 3115244 -0.34 - 0 1 2.68 4.37 1.08 0.00 AA 45: 67 chr6_cox_hap1_105 First 3117052 3117183 2.96 - 0 0 3.62 4.64 7.53 0.00 AA 1: 44 chr6_cox_hap1_105 >chr6_cox_hap1_105|geneid_v1.2_predicted_cDNA_105|1554_NN ATGGCGAAGCTGCTGAGCTGCGTCCTAGGCCCCCGGCTCTACAAAATCTACCGGGAGAGG GACTCTGAAAGGGCCCCGGCCAGCGTCCCTGAGACGCCAACGGCAGTCACTGCCCCCCAT TCCAGCTCCTGGGCTTCAGTATTCTGGTCCATCTCTTATTACTCCTCTCCCTTCGCCTTC TTCTACTTGTACAGGAAAGGTTACTTGAGTTTGTCCAAAGTGGTGCCGTTTTCTCACTAT GCTGGGACATTGCTGCTACTTCTGGCAGGTGTGGCCTGCCTCCGAGGCATTGGCCGCTGG ACCAACCCCCAGTACCGGCAGTTCATCACCATCTTGGAAGCAACACATCGGAACCAGTCT TCAGAAAACAAGAGGCAGCTTGCCAACTACAACTTTGACTTCCGGAGCTGGCCAGTCGAC TTCCACTGGGAAGAACCCAGCAGCCGGAAGGAGTCTCGAGGGGGCCCTTCCCGCCGGGGT GTGGCCCTGCTTCGCCCAGAGCCCCTGCACCGGGGGACAGCAGACACCCTCCTCAACCGG GTTAAGAAGCTGCCTTGTCAGATCACCAGCTACCTGGTGGCGCACACCCTAGGGCGCCGG ATGCTGTATCCAGGCTCTGTGTACCTGCTGCAGAAGGCCCTCATGCCTGTGCTGCTGCAG GGCCAGGCCCGACTGGTGGAAGAGTGTAATGGGCGCCGGGCAAAGCTGCTGGCCTGTGAT GGCAATGAGATTGACACCATGTTTGTGGACCGGCGGGGGACAGCTGAGCCCCAGGGACAG AAGCTGGTGATCTGCTGTGAGGGGAATGCTGGGTTTTATGAGGTGGGCTGCGTCTCCACG CCCCTGGAAGCTGGATATTCAGTCCTGGGCTGGAATCATCCAGGCTTTGCTGGAAGCACG GGGGTGCCATTCCCGCAGAATGAGGCTAATGCCATGGATGTGGTGGTCCAGTTTGCCATC CACCGCCTGGGCTTCCAGCCCCAGGACATCATCATCTACGCCTGGTCCATCGGCGGCTTC ACTGCCACGTGGGCAGCCATGTCCTACCCAGATGTTAGTGCCATGATCCTGGATGCCTCC TTTGATGACCTGGTGCCCTTGGCCTTGAAGGTCATGCCAGACAGCTGGAGGGGCCTGGTG ACCAGGACCGTGAGGCAGCATCTCAATCTAAACAACGCGGAGCAGCTGTGCAGATACCAG GGTCCTGTACTGCTGATCCGGAGAACCAAGGATGAGATCATCACCACCACGGTTCCTGAG GACATCATGTCCAACCGAGGCAATGACCTCCTGCTGAAGCTCCTGCAGCATCGGTATCCC CGGGTGATGGCAGAGGAGGGTCTTCGAGTGGTGAGGCAGTGGTTGGAGGCCTCCTCACAG CTGGAGGAAGGCAGCGGTTCTGACGTCATGGTGAGTGACTGCCGAAGTAAGGAGCAGATG AGTGATTGTTCAAATACCCGAACTTCTCCGGTGTCTGGCTTCTGGATATTCTCTCAATAC TGCTTCCTGGATTTCTGCAATGACCCTCAAAACAGAGGGCTCTATACTCCTTAG >chr6_cox_hap1_105|geneid_v1.2_predicted_protein_105|518_AA MAKLLSCVLGPRLYKIYRERDSERAPASVPETPTAVTAPHSSSWASVFWSISYYSSPFAF FYLYRKGYLSLSKVVPFSHYAGTLLLLLAGVACLRGIGRWTNPQYRQFITILEATHRNQS SENKRQLANYNFDFRSWPVDFHWEEPSSRKESRGGPSRRGVALLRPEPLHRGTADTLLNR VKKLPCQITSYLVAHTLGRRMLYPGSVYLLQKALMPVLLQGQARLVEECNGRRAKLLACD GNEIDTMFVDRRGTAEPQGQKLVICCEGNAGFYEVGCVSTPLEAGYSVLGWNHPGFAGST GVPFPQNEANAMDVVVQFAIHRLGFQPQDIIIYAWSIGGFTATWAAMSYPDVSAMILDAS FDDLVPLALKVMPDSWRGLVTRTVRQHLNLNNAEQLCRYQGPVLLIRRTKDEIITTTVPE DIMSNRGNDLLLKLLQHRYPRVMAEEGLRVVRQWLEASSQLEEGSGSDVMVSDCRSKEQM SDCSNTRTSPVSGFWIFSQYCFLDFCNDPQNRGLYTP* # Gene 106 (Forward). 8 exons. 304 aa. Score = 7.16 First 3120810 3120861 -1.65 + 0 1 2.01 4.38 -1.20 0.00 AA 1: 18 chr6_cox_hap1_106 Internal 3121361 3121690 2.80 + 2 1 3.35 4.98 6.99 0.00 AA 18:128 chr6_cox_hap1_106 Internal 3124255 3124321 1.51 + 2 2 4.33 2.76 5.62 0.00 AA 128:150 chr6_cox_hap1_106 Internal 3137303 3137345 -0.22 + 1 0 2.87 3.29 2.72 0.00 AA 150:164 chr6_cox_hap1_106 Internal 3137713 3137887 3.86 + 0 1 2.89 2.63 13.88 0.00 AA 165:223 chr6_cox_hap1_106 Internal 3138488 3138528 -0.36 + 2 0 2.65 2.60 3.74 0.00 AA 223:236 chr6_cox_hap1_106 Internal 3138647 3138745 0.20 + 0 0 3.84 3.53 1.93 0.00 AA 237:269 chr6_cox_hap1_106 Terminal 3138871 3138975 1.02 + 0 0 5.33 0.00 7.05 0.00 AA 270:304 chr6_cox_hap1_106 >chr6_cox_hap1_106|geneid_v1.2_predicted_cDNA_106|912_NN ATGGCAGTCTTATTCCTCCTCCTGTTCCTATGTGGAACTCCCCAGGCTGCAGACAACATG CAGGCCATCTATGTGGCCTTGGGGGAGGCAGTAGAGCTGCCATGTCCCTCACCACCTACT CTACATGGGGACGAACACCTGTCATGGTTCTGCAGCCCTGCAGCAGGCTCCTTCACCACC CTGGTAGCCCAAGTCCAAGTGGGCAGGCCAGCCCCAGACCCTGGAAAACCAGGAAGGGAA TCCAGGCTCAGACTGCTGGGGAACTATTCTTTGTGGTTGGAGGGATCCAAAGAGGAAGAT GCCGGGCGGTACTGGTGCGCTGTGCTAGGTCAGCACCACAACTACCAGAACTGGAGGGTG TACGACGTCTTGGTGCTCAAAGATGCCTCGATTCCTCAGTTCAAACCCGAAATCCAGGTC TATGAGAACATCCATTTGGCCCGTCTTGGCTGCTACCGCTGCTGCTCTCGAGGGCCCAAG GGAACCCTGGGGCCTTTCGTCGGCCGCCTACGCTCCCTGGACTCTGGTATCCGGCGGCTG GAGCTCCTCTTGAGCGCGGGGGACTCGGGCACTTTTTTCTGCAAGGGCCGCCACGAGGAC GAGAGCCGTACAGTGCTTCACGTGCTGGGGGACAGGACCTATTGCAAGGCCCCCGGGCCT ACCCATGGCGCCTGCCCCCGCAACCGATTCGACCACTCCCTAGATTTGCTCTGTCCCCCC CACATAGCTCCACTTGTGAAAACCGAGCCCCAGAGGCCAGTAAAGGAGGAAGAGCCCAAG ATTCCAGGGGACCTGGACCAGGAACCGAGCCTGCTCTATGCGGATCTGGACCATCTAGCC CTCAGCAGGCCCCGCCGGCTGTCCACAGCGGACCCTGCTGATGCCTCCACCATCTATGCA GTTGTAGTTTGA >chr6_cox_hap1_106|geneid_v1.2_predicted_protein_106|304_AA MAVLFLLLFLCGTPQAADNMQAIYVALGEAVELPCPSPPTLHGDEHLSWFCSPAAGSFTT LVAQVQVGRPAPDPGKPGRESRLRLLGNYSLWLEGSKEEDAGRYWCAVLGQHHNYQNWRV YDVLVLKDASIPQFKPEIQVYENIHLARLGCYRCCSRGPKGTLGPFVGRLRSLDSGIRRL ELLLSAGDSGTFFCKGRHEDESRTVLHVLGDRTYCKAPGPTHGACPRNRFDHSLDLLCPP HIAPLVKTEPQRPVKEEEPKIPGDLDQEPSLLYADLDHLALSRPRRLSTADPADASTIYA VVV* # Gene 107 (Reverse). 6 exons. 286 aa. Score = 6.01 Terminal 3141138 3141254 -1.65 - 0 0 0.00 4.23 2.04 0.00 AA 248:286 chr6_cox_hap1_107 Internal 3141444 3141593 1.03 - 0 0 3.89 4.92 1.88 0.00 AA 198:247 chr6_cox_hap1_107 Internal 3142074 3142193 1.75 - 0 0 2.36 5.63 4.89 0.00 AA 158:197 chr6_cox_hap1_107 Internal 3142352 3142425 -0.95 - 2 0 0.62 -0.18 9.47 0.00 AA 133:157 chr6_cox_hap1_107 Internal 3142547 3142646 4.63 - 0 1 3.15 3.89 13.52 0.00 AA 100:133 chr6_cox_hap1_107 First 3142766 3143062 1.18 - 0 0 4.72 1.01 6.86 0.00 AA 1: 99 chr6_cox_hap1_107 >chr6_cox_hap1_107|geneid_v1.2_predicted_cDNA_107|858_NN ATGGGGACGCCGGGGGAGGGGCTGGGCCGCTGCTCCCATGCCCTGATCCGGGGAGTCCCA GAGAGCCTGGCGTCGGGGGAAGGTGCGGGGGCTGGCCTTCCCGCTCTGGATCTGGCCAAA GCTCAAAGGGAGCACGGGGTGCTGGGAGGTAAACTGAGGCAACGACTGGGGCTACAGCTG CTAGAACTGCCACCTGAGGAGTCATTGCCGCTGGGACCGCTGCTTGGCGACACGGCCGTG ATCCAAGGGGACACGGCCCTAATCACGCGGCCCTGGAGCCCCGCTCGTAGGCCAGAGGTC GATGGAGTCCGCAAAGCCCTGCAAGACCTGGGGCTCCGAATTGTGGAAATAGGAGACGAG AACGCGACGCTGGATGGCACTGACGTTCTCTTCACCGGCCGGGAGTTTTTCGTAGGCCTC TCCAAATGGACCAATCACCGAGGAGCTGAGATCGTGGCGGACACGTTCCGGGACTTCGCC GTCTCCACTGTGCCAGTCTCGGGTCCCTCCCACCTGCGCGGTCTCTGCGGCATGGGGGGA CCTCGCACTGTTGTGGCAGGCAGCAGCGACGCTGCCCAAAAGGCTGTCCGGGCAATGGCA GTGCTGACAGATCACCCATATGCCTCCCTGACCCTCCCAGATGACGCAGCTGCTGACTGT CTCTTTCTTCGTCCTGGGTTGCCTGGTGTGCCCCCTTTCCTCCTGCACCGTGGAGGTGGG GATCTGCCCAACAGCCAGGAGGCACTGCAGAAGCTCTCTGATGTCACCCTGGTACCTGTG TCCTGCTCAGAACTGGAGAAGGCTGGCGCCGGGCTCAGCTCCCTCTGCTTGGTGCTCAGC ACACGCCCCCACAGCTGA >chr6_cox_hap1_107|geneid_v1.2_predicted_protein_107|286_AA MGTPGEGLGRCSHALIRGVPESLASGEGAGAGLPALDLAKAQREHGVLGGKLRQRLGLQL LELPPEESLPLGPLLGDTAVIQGDTALITRPWSPARRPEVDGVRKALQDLGLRIVEIGDE NATLDGTDVLFTGREFFVGLSKWTNHRGAEIVADTFRDFAVSTVPVSGPSHLRGLCGMGG PRTVVAGSSDAAQKAVRAMAVLTDHPYASLTLPDDAAADCLFLRPGLPGVPPFLLHRGGG DLPNSQEALQKLSDVTLVPVSCSELEKAGAGLSSLCLVLSTRPHS* # Gene 108 (Reverse). 6 exons. 242 aa. Score = 15.03 Terminal 3144743 3144904 7.33 - 0 0 0.00 5.80 22.13 0.00 AA 189:242 chr6_cox_hap1_108 Internal 3146118 3146299 3.50 - 2 0 1.59 3.41 15.12 0.00 AA 128:188 chr6_cox_hap1_108 Internal 3147467 3147573 2.67 - 1 1 1.52 4.24 10.52 0.00 AA 92:128 chr6_cox_hap1_108 Internal 3147737 3147862 1.11 - 1 2 1.60 4.18 6.61 0.00 AA 50: 92 chr6_cox_hap1_108 Internal 3148055 3148164 -0.11 - 0 2 2.75 1.38 6.03 0.00 AA 14: 50 chr6_cox_hap1_108 First 3150167 3150205 0.53 - 0 0 4.64 2.06 3.78 0.00 AA 1: 13 chr6_cox_hap1_108 >chr6_cox_hap1_108|geneid_v1.2_predicted_cDNA_108|726_NN ATGGCTGAAGAACAACCGCAGGTCGAATTGTTCGTGAAGGCTGGCAGTGATGGGGCCAAG ATTGGGAACTGCCCATTCTCCCAGAGACTGTTCATGGTACTGTGGCTCAAGGGAGTCACC TTCAATGTTACCACCGTTGACACCAAAAGGCGGACCGAGACAGTGCAGAAGCTGTGCCCA GGGGGGCAGCTCCCATTCCTGCTGTATGGCACTGAAGTGCACACAGACACCAACAAGATT GAGGAATTTCTGGAGGCAGTGCTGTGCCCTCCCAGGTACCCCAAGCTGGCAGCTCTGAAC CCTGAGTCCAACACAGCTGGGCTGGACATATTTGCCAAATTTTCTGCCTACATCAAGAAT TCAAACCCAGCACTCAATGACAATCTGGAGAAGGGACTCCTGAAAGCCCTGAAGGTTTTA GACAATTACTTAACATCCCCCCTCCCAGAAGAAGTGGATGAAACCAGTGCTGAAGATGAA GGTGTCTCTCAGAGGAAGTTTTTGGATGGCAACGAGCTCACCCTGGCTGACTGCAACCTG TTGCCAAAGTTACACATAGTACAGGTGGTGTGTAAGAAGTACCGGGGATTCACCATCCCC GAGGCCTTCCGGGGAGTGCATCGGTACTTGAGCAATGCCTACGCCCGGGAAGAATTCGCT TCCACCTGTCCAGATGATGAGGAGATCGAGCTCGCCTATGAGCAAGTGGCAAAGGCCCTC AAATAA >chr6_cox_hap1_108|geneid_v1.2_predicted_protein_108|242_AA MAEEQPQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCP GGQLPFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFAKFSAYIKN SNPALNDNLEKGLLKALKVLDNYLTSPLPEEVDETSAEDEGVSQRKFLDGNELTLADCNL LPKLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDDEEIELAYEQVAKAL K* # Gene 109 (Forward). 20 exons. 677 aa. Score = 19.29 First 3157841 3157903 -1.94 + 0 0 3.64 0.57 1.34 0.00 AA 1: 21 chr6_cox_hap1_109 Internal 3158068 3158177 1.58 + 0 2 3.59 -0.11 11.22 0.00 AA 22: 58 chr6_cox_hap1_109 Internal 3158424 3158459 1.32 + 1 2 6.63 2.62 1.92 0.00 AA 58: 70 chr6_cox_hap1_109 Internal 3159112 3159194 -0.45 + 1 1 3.89 3.03 1.00 0.00 AA 70: 98 chr6_cox_hap1_109 Internal 3161263 3161308 0.67 + 2 2 5.07 4.94 0.53 0.00 AA 98:113 chr6_cox_hap1_109 Internal 3167179 3167317 -1.39 + 1 0 2.03 -0.30 6.43 0.00 AA 113:159 chr6_cox_hap1_109 Internal 3167445 3167507 0.86 + 0 0 0.71 4.74 6.49 0.00 AA 160:180 chr6_cox_hap1_109 Internal 3172035 3172163 3.10 + 0 0 5.62 0.97 10.34 0.00 AA 181:223 chr6_cox_hap1_109 Internal 3172418 3172490 -0.16 + 0 1 1.51 1.66 7.34 0.00 AA 224:248 chr6_cox_hap1_109 Internal 3172636 3172745 0.56 + 2 0 2.90 2.00 6.55 0.00 AA 248:284 chr6_cox_hap1_109 Internal 3172967 3173047 1.39 + 0 0 4.76 2.91 4.46 0.00 AA 285:311 chr6_cox_hap1_109 Internal 3173295 3173382 -0.05 + 0 1 -0.62 1.73 10.70 0.00 AA 312:341 chr6_cox_hap1_109 Internal 3173656 3173845 5.13 + 2 2 1.49 4.61 16.19 0.00 AA 341:404 chr6_cox_hap1_109 Internal 3173960 3174086 -1.48 + 1 0 0.38 3.65 2.76 0.00 AA 404:446 chr6_cox_hap1_109 Internal 3174560 3174709 1.24 + 0 0 4.31 -0.62 10.07 0.00 AA 447:496 chr6_cox_hap1_109 Internal 3175058 3175132 1.10 + 0 0 1.19 3.33 8.47 0.00 AA 497:521 chr6_cox_hap1_109 Internal 3175342 3175485 2.59 + 0 0 6.16 2.60 5.84 0.00 AA 522:569 chr6_cox_hap1_109 Internal 3175688 3175825 2.12 + 0 0 4.95 1.88 7.55 0.00 AA 570:615 chr6_cox_hap1_109 Internal 3175982 3176055 2.15 + 0 2 5.37 1.04 8.27 0.00 AA 616:640 chr6_cox_hap1_109 Terminal 3176290 3176401 0.94 + 1 0 4.75 0.00 7.73 0.00 AA 640:677 chr6_cox_hap1_109 >chr6_cox_hap1_109|geneid_v1.2_predicted_cDNA_109|2031_NN ATGACTGCCACTGAGAAAATCCTCTTCCTCTCTTCCATTATTCCCTTTGACTGCCTCCTC ACAGTTCGAGCACTTGGAGGGCTGCTGAAGTTCCTGGGTCGAAGAAGAATCGGGGTTGAA CTGGAAGACTATAATGTCAGCGTCCCCATCCTGGGCTTTAAGAAATTTATGTTGACTCAT CTGGTGAACATAGATCAAGACACTTACAGTGTTCTACAGATTTTTAAGAGTGAGTCTCAC CCCTCAGTGTACAAAGTGGCCAGTGGACTGAAGGAGGGGCTCAGCCTCTTTGGAATCCTC AACAGATGCCACTGTAAGTGGGGAGAGAAGCTGCTCAGGCTATGGTTCACACGTCCGACT CATGACCTGGGGGAGCTCAGTTCTCGTCTGGACGTCATTCAGTTTTTTCTGCTGCCCCAG AATCTGGACATGGCTCAGATGCTGCATCGGCTCCTGGGTCACATCAAGAACGTGCCTCTG ATTCTGAAACGCATGAAGTTGTCCCACACCAAGGTCAGCGACTGGCAGGTTCTCTACAAG ACTGTGTACAGTGCCCTGGGCCTGAGGGATGCCTGCCGCTCCCTGCCGCAGTCCATCCAG CTCTTTCGGGACATTGCCCAAGAGTTCTCTGATGACCTGCACCATATCGCCAGCCTCATT GGGAAAGTAGTGGACTTTGAGGGCAGCCTTGCTGAAAATCGCTTCACAGTCCTCCCCAAC ATAGATCCTGAAATTGATGAGAAAAAGCGAAGACTGATGGGACTTCCCAGTTTCCTTACT GAGGTTGCCCGCAAGGAGCTGGAGAATCTGGACTCCCGTATTCCTTCATGCAGTGTCATC TACATCCCTCTGATTGGCTTCCTTCTTTCTATTCCCCGCCTGCCTTCCATGGTAGAGGCC AGTGACTTTGAGATTAATGGACTGGACTTCATGTTTCTCTCAGAGGAGAAGCTGCACTAT CGTAGTGCCCGAACCAAGGAGCTGGATGCATTGCTGGGGGACCTGCACTGCGAGATCCGG GACCAGGAGACGCTGCTGATGTACCAGCTACAGTGCCAGGTGCTGGCACGAGCAGCTGTC TTAACCCGAGTATTGGACCTTGCCTCCCGCCTGGACGTCCTGCTGGCTCTTGCCAGTGCT GCCCGGGACTATGGCTACTCAAGGCCGCGTTACTCCCCACAAGTCCTTGGGGTACGAATC CAGAATGGCAGACATCCTCTGATGGAACTCTGTGCCCGAACTTTTGTGCCCAACTCCACA GAATGTGGTGGGGACAAAGGGAGGGTCAAAGTCATCACTGGACCCAACTCATCAGGGAAG AGCATATACCTCAAACAGGTAGGCTTGATCACATTCATGGCCCTGGTAGGCAGCTTTGTG CCAGCAGAGGAGGCCGAAATTGGGGCAGTAGACGCCATCTTCACACGAATTCATAGCTGC GAATCCATCTCCCTTGGCCTCTCCACCTTCATGATCGACCTCAACCAGGTGGCGAAAGCA GTGAACAATGCCACTGCACAGTCGCTGGTCCTTATTGATGAATTTGGAAAGGGAACCAAC ACGGTGGATGGGCTCGCGCTTCTGGCCGCTGTGCTCCGACACTGGCTGGCACGTGGACCC ACATGCCCCCACATCTTTGTGGCCACCAACTTTCTGAGCCTTGTTCAGCTACAGCTGCTG CCACAAGGGCCCCTGGTGCAGTATTTGACCATGGAGACCTGTGAGGATGGCAACGATCTT GTCTTCTTCTATCAGGTTTGCGAAGGTGTTGCGAAGGCCAGCCATGCCTCCCACACAGCT GCCCAGGCTGGGCTTCCTGACAAGCTTGTGGCTCGTGGCAAGGAGGTCTCAGACTTGATC CGCAGTGGAAAACCCATCAAGCCTGTCAAGGATTTGCTAAAGAAGAACCAAATGGAAAAT TGCCAGACATTAGTGGATAAGTTTATGAAACTGGATTTGGAAGATCCTAACCTGGACTTG AACGTTTTCATGAGCCAGGAAGTGCTGCCTGCTGCCACCAGCATCCTCTGA >chr6_cox_hap1_109|geneid_v1.2_predicted_protein_109|677_AA MTATEKILFLSSIIPFDCLLTVRALGGLLKFLGRRRIGVELEDYNVSVPILGFKKFMLTH LVNIDQDTYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCHCKWGEKLLRLWFTRPT HDLGELSSRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMKLSHTKVSDWQVLYK TVYSALGLRDACRSLPQSIQLFRDIAQEFSDDLHHIASLIGKVVDFEGSLAENRFTVLPN IDPEIDEKKRRLMGLPSFLTEVARKELENLDSRIPSCSVIYIPLIGFLLSIPRLPSMVEA SDFEINGLDFMFLSEEKLHYRSARTKELDALLGDLHCEIRDQETLLMYQLQCQVLARAAV LTRVLDLASRLDVLLALASAARDYGYSRPRYSPQVLGVRIQNGRHPLMELCARTFVPNST ECGGDKGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEEAEIGAVDAIFTRIHSC ESISLGLSTFMIDLNQVAKAVNNATAQSLVLIDEFGKGTNTVDGLALLAAVLRHWLARGP TCPHIFVATNFLSLVQLQLLPQGPLVQYLTMETCEDGNDLVFFYQVCEGVAKASHASHTA AQAGLPDKLVARGKEVSDLIRSGKPIKPVKDLLKKNQMENCQTLVDKFMKLDLEDPNLDL NVFMSQEVLPAATSIL* # Gene 110 (Reverse). 42 exons. 2522 aa. Score = 159.59 Terminal 3177345 3177377 -1.51 - 0 0 0.00 3.85 2.96 0.00 AA 2512:2522 chr6_cox_hap1_110 Internal 3179754 3179928 1.66 - 1 0 3.65 3.44 6.01 0.00 AA 2453:2511 chr6_cox_hap1_110 Internal 3180114 3180633 3.62 - 2 2 3.99 4.35 9.04 0.00 AA 2280:2453 chr6_cox_hap1_110 Internal 3181491 3181623 1.40 - 0 1 1.66 1.36 11.46 0.00 AA 2236:2280 chr6_cox_hap1_110 Internal 3182875 3183060 3.61 - 0 0 4.00 2.26 12.13 0.00 AA 2174:2235 chr6_cox_hap1_110 Internal 3183532 3183648 1.42 - 0 0 2.56 2.39 8.64 0.00 AA 2135:2173 chr6_cox_hap1_110 Internal 3183858 3183970 -0.51 - 2 0 -0.18 5.57 3.15 0.00 AA 2097:2134 chr6_cox_hap1_110 Internal 3186810 3186979 7.17 - 1 1 5.66 3.67 16.42 0.00 AA 2040:2097 chr6_cox_hap1_110 Internal 3187098 3187293 1.78 - 2 2 4.94 2.22 6.20 0.00 AA 1975:2040 chr6_cox_hap1_110 Internal 3189188 3189284 -0.45 - 0 1 3.12 3.14 1.98 0.00 AA 1943:1975 chr6_cox_hap1_110 Internal 3189819 3190097 6.20 - 0 0 3.89 3.63 16.71 0.00 AA 1850:1942 chr6_cox_hap1_110 Internal 3190401 3190574 3.01 - 0 0 2.19 1.99 13.76 0.00 AA 1792:1849 chr6_cox_hap1_110 Internal 3192822 3193147 9.49 - 2 0 1.62 5.13 26.10 0.00 AA 1683:1791 chr6_cox_hap1_110 Internal 3193280 3193391 4.05 - 0 1 0.21 3.95 16.39 0.00 AA 1646:1683 chr6_cox_hap1_110 Internal 3193463 3193669 5.17 - 0 0 3.30 3.97 14.52 0.00 AA 1577:1645 chr6_cox_hap1_110 Internal 3193853 3194008 6.23 - 0 0 2.84 0.84 22.55 0.00 AA 1525:1576 chr6_cox_hap1_110 Internal 3194296 3194423 4.10 - 2 0 4.38 1.52 13.90 0.00 AA 1482:1524 chr6_cox_hap1_110 Internal 3194560 3194638 0.04 - 0 1 1.43 4.48 3.73 0.00 AA 1456:1482 chr6_cox_hap1_110 Internal 3194725 3194793 2.92 - 0 0 2.74 3.26 10.79 0.00 AA 1433:1455 chr6_cox_hap1_110 Internal 3194874 3194978 4.53 - 0 0 1.41 3.06 17.12 0.00 AA 1398:1432 chr6_cox_hap1_110 Internal 3195336 3195461 1.13 - 0 0 2.13 2.13 8.93 0.00 AA 1356:1397 chr6_cox_hap1_110 Internal 3195942 3196032 -0.09 - 1 0 4.07 3.01 1.67 0.00 AA 1325:1355 chr6_cox_hap1_110 Internal 3196140 3196298 3.01 - 1 2 0.96 2.11 15.44 0.00 AA 1272:1325 chr6_cox_hap1_110 Internal 3196385 3196488 0.46 - 0 2 1.25 1.34 9.78 0.00 AA 1238:1272 chr6_cox_hap1_110 Internal 3196576 3196700 2.12 - 2 0 2.33 -0.30 14.75 0.00 AA 1196:1237 chr6_cox_hap1_110 Internal 3196951 3197041 3.48 - 0 1 1.66 4.50 11.96 0.00 AA 1166:1196 chr6_cox_hap1_110 Internal 3198070 3198164 1.55 - 2 0 1.47 1.65 11.69 0.00 AA 1134:1165 chr6_cox_hap1_110 Internal 3198250 3198358 4.51 - 0 1 2.80 3.08 14.94 0.00 AA 1098:1134 chr6_cox_hap1_110 Internal 3198451 3198570 3.50 - 0 0 2.06 3.68 12.63 0.00 AA 1058:1097 chr6_cox_hap1_110 Internal 3199102 3199183 -0.45 - 1 0 -0.68 3.08 7.78 0.00 AA 1030:1057 chr6_cox_hap1_110 Internal 3199425 3199589 2.85 - 1 2 1.60 2.24 13.86 0.00 AA 975:1030 chr6_cox_hap1_110 Internal 3205463 3205590 0.52 - 0 2 2.15 2.15 7.34 0.00 AA 933:975 chr6_cox_hap1_110 Internal 3205724 3205824 1.75 - 2 0 3.24 5.03 4.49 0.00 AA 899:932 chr6_cox_hap1_110 Internal 3206070 3206154 -1.55 - 0 1 1.93 1.33 3.74 0.00 AA 871:899 chr6_cox_hap1_110 Internal 3206245 3206369 4.04 - 2 0 4.21 3.87 10.48 0.00 AA 829:870 chr6_cox_hap1_110 Internal 3206610 3206748 0.32 - 0 1 3.65 4.07 1.72 0.00 AA 783:829 chr6_cox_hap1_110 Internal 3206839 3206973 0.94 - 0 0 1.91 3.97 6.03 0.00 AA 738:782 chr6_cox_hap1_110 Internal 3211842 3211901 0.82 - 0 0 2.93 3.03 5.61 0.00 AA 718:737 chr6_cox_hap1_110 Internal 3212329 3212359 -0.49 - 1 0 3.56 3.00 1.43 0.00 AA 707:717 chr6_cox_hap1_110 Internal 3219930 3219997 1.87 - 0 2 4.51 4.31 3.93 0.00 AA 685:707 chr6_cox_hap1_110 Internal 3220610 3220787 -0.68 - 1 0 1.51 0.35 7.99 0.00 AA 625:684 chr6_cox_hap1_110 First 3223964 3225837 66.05 - 0 2 2.38 2.42 170.43 0.00 AA 1:625 chr6_cox_hap1_110 >chr6_cox_hap1_110|geneid_v1.2_predicted_cDNA_110|7566_NN ATGGCTACTGCCAAGGGAATCGCCATAGGCATCGACCTGGGCACCACCTACTCCTGTGTG GGGGTGTTCCAGCACGGCAAGGTGGAGATCATCGCCAACGACCAGGGCAACCGCACCACC CCCAGCTACGTGGCCTTCACAGACACCGAGCGGCTCATTGGGGATGCGGCCAAGAACCAG GTAGCAATGAATCCCCAGAACACTGTTTTTGATGCTAAACGTCTGATCGGCAGGAAATTT AATGATCCTGTTGTACAAGCAGATATGAAACTTTGGCCTTTTCAAGTGATTAATGAAGGA GGCAAGCCCAAAGTCCTTGTGTCCTACAAAGGGGAGAATAAAGCTTTCTACCCTGAGGAA ATCTCTTCGATGGTATTGACTAAGTTGAAGGAGACTGCTGAGGCCTTTTTGGGCCACCCT GTCACCAATGCAGTGATTACCGTGCCAGCCTATTTCAATGACTCTCAACGTCAGGCTACT AAGGATGCAGGTGTGATTGCTGGACTTAATGTGCTAAGAATCATCAATGAGCCCACGGCT GCTGCCATTGCCTATGGTTTAGATAAAGGAGGTCAAGGAGAACGACATGTCCTGATTTTT GATCTGGGTGGAGGCACATTTGATGTGTCAATTCTGACCATAGATGATGGGATTTTTGAG GTAAAGGCCACTGCTGGGGACACTCACCTGGGTGGGGAGGACTTTGACAACAGGCTTGTG AGCCACTTCGTGGAGGAGTTCAAGAGGAAACACAAAAAGGACATCAGCCAGAACAAGCGA GCCGTGAGGCGGCTGCGCACCGCCTGCGAGAGGGCCAAGAGGACCCTGTCGTCCAGCACC CAGGCCAACCTAGAAATTGATTCACTTTATGAAGGCATTGACTTCTATACATCCATCACC AGAGCTCGATTTGAAGAGTTGTGTGCAGACCTGTTTAGGGGTACCCTGGAGCCTGTAGAA AAAGCGCTTCGGGATGCCAAGATGGATAAGGCTAAAATCCATGACATTGTTTTAGTAGGG GGCTCCACCCGCATCCCCAAGGTGCAGCGGCTGCTTCAGGACTACTTCAATGGACGTGAT CTCAACAAGAGCATCAACCCTGATGAGGCCGTAGCATATGGGGCTGCGGTACAAGCAGCC ATCCTGATGGGGGACAAGTCTGAGAAGGTACAGGACCTGCTGCTGCTGGACGTGGCTCCC CTGTCCCTGGGGCTGGAGACGGCTGGGGGCGTGATGACTGCCCTGATAAAGCGCAACTCC ACCATCCCCACCAAGCAGACACAGATTTTCACCACCTACTCTGACAACCAACCCGGGGTG CTGATCCAGGTGTATGAGGGCGAGAGGGCCATGACAAAGGACAACAACCTGCTGGGGCGG TTTGACCTGACTGGAATCCCTCCAGCACCCAGGGGAGTTCCTCAGATCGAGGTGACGTTT GACATTGATGCCAATGGTATTCTCAATGTCACAGCCATGGACAAGAGCACCGGCAAGGTG AACAAGATCACCATCACCAATGACAAGGGCCGCCTGAGCAAGGAGGAGATTGAGCGCATG GTTCTGGATGCTGAGAAATATAAAGCTGAAGATGAGGTCCAGAGGGAGAAAATTGCTGCA AAGAATGCCTTAGAATCCTATGCTTTTAACATGAAGAGTGTTGTGAGTGATGAAGGTTTG AAGGGCAAGATTAGTGAGTCTGATAAAAATAAAATATTGGATAAATGCAACGAGCTCCTT TCGTGGCTGGAGGTCAATCAACTGGCAGAGAAAGATGAGTTTGATCATAAGAGAAAGGAA TTGGAGCAGATGTGTAACCCTATCATCACAAAACTCTACCAAGGAGGATGCACTGGGCCT GCCTGCGGAACAGGCCGCAAGTCGGCCGCGCTTTGCCCGTCAGCGCTTGGAGCTTTCTGC GTCGCTTCCCGCTGCGCCTGCGCGGTCCCGCCTCGCCCCACGCGCGGGCTCGCGCTTCGG TTTCCCCAGACCTGCTCGCAGCACCCTGCTGTCTTCCCGGTCCGGCCCGCTGCCCGCGGC GCCAGCACCATGCTCTTCTATTCTTTTTTCAAGTCCCTTGTGGGCAAGGATGTGGTCGTG GAACTAAAGAATGACCTGAGCATCTGTGGAACCCTCCATTCTGTGGATCAGTATCTCAAC ATCAAACTAACTGACATCAGTGTCACAGACCCTGAGAAATACCCTCACATGGCTGTGCTG GGGGCCCTGGGCAGGGCCCTGAGCCCCTTGGAGGAGTGGCTTCGGCTGCACACCTACTTG GCCGGGGAGGCCCCCACTCTGGCTGACCTGGCGGCTGTCACAGCCTTGCTGCTGCCTTTC CGATACGTCCTAGACCCACCTGCCCGCCGGATCTGGAATAATGTGACTCGCTGGTTTGTC ACGTGTGTCCGGCAGCCAGAATTCCGAGCCGTGCTAGGAGAAGTGGTTCTATACTCAGGA GCCAGGCCTCTCTCTCATCAGCCAGGCCCCGAGGCTCCTGCCCTCCCAAAGACAGCTGCT CAGCTCAAGAAAGAGGCAAAGAAACGGGAGAAGCTAGAGAAATTCCAACAGAAGCAGAAG ATCCAACAGCAGCAGCCACCTCCAGGGGAGAAGAAACCAAAACCAGAGAAGAGGGAGAAA CGGGATCCTGGGGTCATTACCTATGACCTCCCAACCCCACCCGGGGAAAAGAAAGATGTC AGTGGCCCCATGCCCGACTCCTACAGCCCTCGGTATGTGGAGGCTGCCTGGTACCCTTGG TGGGAGCAGCAGGGCTTCTTCAAGCCAGAGTATGGGCGTCCTAATGTGTCAGCAGCAAAT CCCCGAGGTGTCTTCATGATGTGCATCCCACCCCCCAATGTGACAGGCTCCCTGCACCTG GGCCATGCACTCACCAACGCCATCCAGGACTCCCTGACTCGATGGCACCGCATGCGTGGG GAGACCACCCTGTGGAACCCTGGCTGTGACCATGCAGGTATTGCCACCCAGGTGGTGGTG GAGAAGAAGCTATGGCGTGAGCAGGGACTGAGCCGGCACCAGCTGGGCCGCGAGGCCTTT CTACAGGAAGTCTGGAAGTGGAAGGAGGAGAAAGGTGACCGGATTTACCACCAGTTGAAG AAGCTTGGCAGCTCCTTGGACTGGGATCGAGCCTGTTTCACCATGGACCCTAAACTCTCA GCAGCTGTGACAGAGGCCTTTGTCCGGCTTCACGAGGAAGGCATCATCTATCGCAGTACC CGCCTTGTTAACTGGTCCTGCACCCTCAACTCCGCCATCTCTGACATTGAGGTGGATAAG AAGGAGCTGACAGGTCGCACCCTGCTCTCCGTGCCTGGCTACAAGGAGAAGGTGGAGTTC GGGGTCCTCGTGTCCTTTGCCTATAAGGTCCAAGGCTCAGATAGCGACGAGGAGGTGGTG GTGGCAACAACTCGGATCGAGACAATGCTGGGAGATGTGGCTGTAGCTGTGCACCCCAAA GATACCAGATACCAGCACCTGAAGGGGAAGAACGTGATCCACCCATTCCTGTCTCGGAGC CTTCCCATTGTCTTCGATGAATTTGTGGACATGGACTTTGGCACAGGTGCTGTGAAGATC ACCCCCGCACATGACCAAAATGACTATGAAGTTGGGCAGCGGCACGGGCTGGAGGCCATC AGCATCATGGACTCCCGGGGGGCCCTCATCAATGTGCCTCCGCCTTTCCTGGGCCTGCCC AGGTTTGAGGCCAGGAAAGCGGTGCTGGTGGCGCTGAAGGAGCGGGGACTGTTCCGTGGC ATTGAGGACAACCCCATGGTGGTGCCACTTTGCAACCGGTCGAAGGACGTGGTAGAGCCT CTGCTGCGGCCGCAGTGGTACGTTCGCTGCGGGGAGATGGCCCAGGCTGCCAGCGCCGCT GTGACTCGGGGTGACCTCCGCATCCTGCCTGAGGCCCATCAGCGCACATGGCATGCCTGG ATGGACAACATCCGGGAGTGGTGCATTTCCAGGCAGCTGTGGTGGGGCCATCGCATCCCA GCCTACTTTGTCACTGTCAGTGACCCAGCGGTGCCCCCTGGGGAGTCAGAAGACCTGAGT GTGTTCTACCCCGGGACACTGCTGGAGACCGGTCATGACATCCTCTTCTTCTGGGTGGCC CGGATGGTCATGCTGGGCCTGAAGCTCACGGGCAGGCTGCCCTTTAGAGAGGTCTACCTC CATGCCATCGTGCGAGATGCTCACGGCCGGAAGATGAGCAAGTCTCTAGGCAATGTCATC GATCCCCTGGACGTCATCTATGGAATCTCCCTGCAGGGCCTCCACAACCAGCTGCTGAAC AGCAACCTGGATCCCAGCGAGGTGGAGAAGGCCAAAGAAGGGCAGAAAGCTGACTTCCCA GCGGGGATTCCTGAATGTGGCACCGATGCTCTCCGGTTTGGATTATGTGCCTACATGTCC CAGGGTCGTGACATCAACCTGGATGTGAACCGGATACTGGGTTACCGCCACTTCTGCAAC AAGCTCTGGAATGCCACCAAGTTTGCCCTTCGTGGCCTTGGGAAGGGTTTTGTGCCCTCA CCCACCTCCCAGCCCGGAGGCCATGAGAGCCTGGTGGACCGCTGGATCCGCAGCCGCCTG ACAGAGGCTGTGAGGCTCAGCAATCAAGGCTTCCAGGCCTACGACTTCCCGGCCGTCACC ACTGCCCAGTACAGCTTCTGGCTCTATGAGCTCTGTGATGTCTACTTGGAGTGCCTGAAA CCTGTACTGAATGGGGTGGACCAGGTGGCAGCTGAGTGTGCCCGCCAGACCCTGTACACT TGCCTGGACGTTGGCCTGCGGCTGCTCTCACCCTTCATGCCCTTCGTGACGGAGGAGCTG TTCCAGAGGCTGCCCCGGAGGATGCCGCAAGCTCCCCCTAGCCTCTGTGTTACCCCCTAC CCGGAGCCCTCAGAGTGCTCCTGGAAGGACCCCGAGGCAGAAGCCGCCCTTGAGCTGGCG CTAAGCATCACGCGAGCCGTGCGCTCCCTGCGGGCCGACTACAACCTCACCCGGATCCGG CCTGACTGTTTCCTGGAAGTGGCGGATGAGGCCACGGGCGCCCTGGCATCGGCGGTGTCG GGCTACGTGCAGGCCCTGGCCAGCGCAGGTGTGGTGGCTGTTCTGGCCCTGGGGGCTCCC GCCCCCCAGGGTTGCGCTGTGGCTCTGGCTTCTGATCGCTGCTCCATCCACCTGCAGCTT CAGGGGCTGGTGGACCCTGCACGGGAGCTGGGCAAGCTGCAAGCCAAGCGAGTTGAGGCC CAGCGGCAGGCCCAGCGTCTGCGGGAACGCCGTGCTGCCTCGGGCTATCCTGTCAAGGTG CCGCTCGAAGTCCAGGAGGCAGATGAAGCCAAGCTGTTGCTGCCCCCCACATCTGCCTTC TTCCCCAACATCTGGAGCCTGCTGGCTGCCCCTGGCTCCATCACCCACCAAGACCTAACT GAGGAGGCAGCGCTCAACGTCACCCTGCAGCTCTTCCTGGAGCAGCCACCCCCAGGCCGC CCCCCTCTTCGTCTTGAGGACTTCCTGGGTCGAACACTCCTTGCTGATGACCTCTTTGCC GCCTACTTTGGACCTGGTTCTTCTCGGCGGTTCCGAGCAGCCTTAGGTGAGGTGTCTCGT GCCAATGCAGCCCAGGACTTCCTGCCAACTTCCAGGAATGACCCCGACCTGCACTTTGAT GCTGAGCGACTGGGTCAGGGACGCGCGCGCCTGGTAGGGGCTCTGCGGGAGACCGTGGTG GCAGCCAGGGCCCTTGACCACACCCTGGCTCGCCAGCGCCTCGGGGCTGCACTTCATGCC CTGCAGGATTTCTACAGTCATAGCAACTGGGTGGAGCTGGGCGAGCAGCAGCCACACCCT CACCTCCTCTGGCCAAGGCAGGAGCTCCAGAACCTGGCACAAGGGAAATGTAGCCACGGG GGCCATTTTGACCGGAGCAGCTCCCAGCCACCGAGGGGAGGCATCAACAAGGACAGCACA TCCCCAGGCTTCTCCCCTCACCACATGCTGCACCTCCAGGCTGCAAAACTGGCCCTTCTA GCCTCCATCCAGGCCTTCAGCCTTCTGCGAAGCCGCCTGGGAGACAGGGATTTCTCCAGG CTGCTGGACATCACCCCAGCCTCCAGCCTGAGCTTTGTCCTGGACACCACGGGCAGCATG GGTGAGGAGATCAACGCTGCCAAAATCCAGGCTCGCCACCTTGTGGAGCAGCGGAGAGGC AGCCCCATGGAGCCTGTCCACTATGTCCTGGTGCCTTTTCATGACCCAGGGTTCGGCCCT GTCTTTACAACCAGTGACCCTGACAGCTTCTGGCAACAGCTTAATGAGATCCATGCCTTG GGGGGTGGAGACGAGCCTGAGATGTGCCTGTCAGCCCTGCAGCTGGCCCTGCTGCACACA CCTCCACTCTCAGATATCTTTGTCTTCACGGATGCCTCCCCCAAGGATGCCTTTCTCACC AACCAGGTGGAATCCCTGACTCAGGAGCGGCGCTGCCGGGTAACATTCCTGGTGACTGAA GATACATCAAGGGTTCAGGGTCGAGCTCGGCGTGAGATCTTGTCCCCTCTGCGTTTTGAG CCATACAAAGCAGTGGCCCTGGCCTCAGGAGGAGAGGTGATCTTCACCAAAGACCAGCAC ATTCGAGACGTGGCAGCCATTGTTGGGGAGAGCATGGCTGCCCTGGTGACTCTTCCCCTG GACCCTCCTGTTGTGGTGCCTGGGCAGCCACTTGTGTTCAGCGTGGATGGGCTGCTCCAG AAGATCACAGTCCGGATCCACGGAGACATCAGCAGCTTCTGGATCAAGAACCCTGCAGGT CTTCAGACCCAGCTGCTGGTAGAAGTGACAGGGTTGGGTTCCAGAGCCAATCCTGGGGAT CCTCAGCCGCATTTCTCCCACGTCATCCTTCGAGGGGTCCCAGAGGGTGCCGAACTAGGC CAGGTGCCCTTGGAGCCCGTGGGACCTCCGGAGCGAGGTCTCCTCGCAGCCTCGCTGTCG CCCACGCTGCTGTCAACCCCTAGACCCTTCTCCCTGGAGCTGATTGGCCAGGACGCAGCG GGGCGGCGCCTGCACAGGGCTGCCCCTCAGCCTAGCACTGTAGTCCCTGTCCTTCTGGAG GTGAGACGCCAGGGGAAAGTGCGGCTGGGGCTGGAGAGAGTTAGAGCGGCCCCTTCCCTG AAGAACCCTTCTCTGCAGCTTAGTGGCCCCTCGGGTTTCTTGGCCCCGGGCAGCAAAGTC CCGCTCAGTCTCCGCATCGCCAGCTTCTCGGGCCCTCAGGATCTTGACCTTAGGACTTTC GTCAACCCCAGCTTCTCCCTCACCTCCAACCTCTCCAGGGCTCACCTGGAACTGAATGAG TCGGCCTGGGGCCGCCTGTGGCTGGAGGTCCCAGATTCAGCGGCCCCGGATTCCGTGGTG ATGGTGACTGTGACTGCAGGGGGACGAGAAGCCAACCCAGTACCCCCGACTCATGCTTTC CTCCGGCTCCTGGTATCGGCCCCAGCCCCGCAGATGGTCTTCAAACCAGGCCTGGCCATG CTGTAG >chr6_cox_hap1_110|geneid_v1.2_predicted_protein_110|2522_AA MATAKGIAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ VAMNPQNTVFDAKRLIGRKFNDPVVQADMKLWPFQVINEGGKPKVLVSYKGENKAFYPEE ISSMVLTKLKETAEAFLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTA AAIAYGLDKGGQGERHVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLV SHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSIT RARFEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRD LNKSINPDEAVAYGAAVQAAILMGDKSEKVQDLLLLDVAPLSLGLETAGGVMTALIKRNS TIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFDLTGIPPAPRGVPQIEVTF DIDANGILNVTAMDKSTGKVNKITITNDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAA KNALESYAFNMKSVVSDEGLKGKISESDKNKILDKCNELLSWLEVNQLAEKDEFDHKRKE LEQMCNPIITKLYQGGCTGPACGTGRKSAALCPSALGAFCVASRCACAVPPRPTRGLALR FPQTCSQHPAVFPVRPAARGASTMLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLN IKLTDISVTDPEKYPHMAVLGALGRALSPLEEWLRLHTYLAGEAPTLADLAAVTALLLPF RYVLDPPARRIWNNVTRWFVTCVRQPEFRAVLGEVVLYSGARPLSHQPGPEAPALPKTAA QLKKEAKKREKLEKFQQKQKIQQQQPPPGEKKPKPEKREKRDPGVITYDLPTPPGEKKDV SGPMPDSYSPRYVEAAWYPWWEQQGFFKPEYGRPNVSAANPRGVFMMCIPPPNVTGSLHL GHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWREQGLSRHQLGREAF LQEVWKWKEEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSAAVTEAFVRLHEEGIIYRST RLVNWSCTLNSAISDIEVDKKELTGRTLLSVPGYKEKVEFGVLVSFAYKVQGSDSDEEVV VATTRIETMLGDVAVAVHPKDTRYQHLKGKNVIHPFLSRSLPIVFDEFVDMDFGTGAVKI TPAHDQNDYEVGQRHGLEAISIMDSRGALINVPPPFLGLPRFEARKAVLVALKERGLFRG IEDNPMVVPLCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRTWHAW MDNIREWCISRQLWWGHRIPAYFVTVSDPAVPPGESEDLSVFYPGTLLETGHDILFFWVA RMVMLGLKLTGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIYGISLQGLHNQLLN SNLDPSEVEKAKEGQKADFPAGIPECGTDALRFGLCAYMSQGRDINLDVNRILGYRHFCN KLWNATKFALRGLGKGFVPSPTSQPGGHESLVDRWIRSRLTEAVRLSNQGFQAYDFPAVT TAQYSFWLYELCDVYLECLKPVLNGVDQVAAECARQTLYTCLDVGLRLLSPFMPFVTEEL FQRLPRRMPQAPPSLCVTPYPEPSECSWKDPEAEAALELALSITRAVRSLRADYNLTRIR PDCFLEVADEATGALASAVSGYVQALASAGVVAVLALGAPAPQGCAVALASDRCSIHLQL QGLVDPARELGKLQAKRVEAQRQAQRLRERRAASGYPVKVPLEVQEADEAKLLLPPTSAF FPNIWSLLAAPGSITHQDLTEEAALNVTLQLFLEQPPPGRPPLRLEDFLGRTLLADDLFA AYFGPGSSRRFRAALGEVSRANAAQDFLPTSRNDPDLHFDAERLGQGRARLVGALRETVV AARALDHTLARQRLGAALHALQDFYSHSNWVELGEQQPHPHLLWPRQELQNLAQGKCSHG GHFDRSSSQPPRGGINKDSTSPGFSPHHMLHLQAAKLALLASIQAFSLLRSRLGDRDFSR LLDITPASSLSFVLDTTGSMGEEINAAKIQARHLVEQRRGSPMEPVHYVLVPFHDPGFGP VFTTSDPDSFWQQLNEIHALGGGDEPEMCLSALQLALLHTPPLSDIFVFTDASPKDAFLT NQVESLTQERRCRVTFLVTEDTSRVQGRARREILSPLRFEPYKAVALASGGEVIFTKDQH IRDVAAIVGESMAALVTLPLDPPVVVPGQPLVFSVDGLLQKITVRIHGDISSFWIKNPAG LQTQLLVEVTGLGSRANPGDPQPHFSHVILRGVPEGAELGQVPLEPVGPPERGLLAASLS PTLLSTPRPFSLELIGQDAAGRRLHRAAPQPSTVVPVLLEVRRQGKVRLGLERVRAAPSL KNPSLQLSGPSGFLAPGSKVPLSLRIASFSGPQDLDLRTFVNPSFSLTSNLSRAHLELNE SAWGRLWLEVPDSAAPDSVVMVTVTAGGREANPVPPTHAFLRLLVSAPAPQMVFKPGLAM L* # Gene 111 (Forward). 1 exons. 642 aa. Score = 146.18 Single 3229621 3231546 146.18 + 0 0 3.10 0.00 373.31 0.00 AA 1:642 chr6_cox_hap1_111 >chr6_cox_hap1_111|geneid_v1.2_predicted_cDNA_111|1926_NN ATGGCCAAAGCCGCGGCGATCGGCATCGACCTGGGCACCACCTACTCCTGCGTGGGGGTG TTCCAACACGGCAAGGTGGAGATCATCGCCAACGACCAGGGCAACCGCACCACCCCCAGC TACGTGGCCTTCACGGACACCGAGCGGCTCATCGGGGATGCGGCCAAGAACCAGGTGGCG CTGAACCCGCAGAACACCGTGTTTGACGCGAAGCGGCTGATCGGCCGCAAGTTCGGCGAC CCGGTGGTGCAGTCGGACATGAAGCACTGGCCTTTCCAGGTGATCAACGACGGAGACAAG CCCAAGGTGCAGGTGAGCTACAAGGGGGAGACCAAGGCATTCTACCCCGAGGAGATCTCG TCCATGGTGCTGACCAAGATGAAGGAGATCGCCGAGGCGTACCTGGGCTACCCGGTGACC AACGCGGTGATCACCGTGCCGGCCTACTTCAACGACTCGCAGCGCCAGGCCACCAAGGAT GCGGGTGTGATCGCGGGGCTCAACGTGCTGCGGATCATCAACGAGCCCACGGCCGCCGCC ATCGCCTACGGCCTGGACAGAACGGGCAAGGGGGAGCGCAACGTGCTCATCTTTGACCTG GGCGGGGGCACCTTCGACGTGTCCATCCTGACGATCGACGACGGCATCTTCGAGGTGAAG GCCACGGCCGGGGACACCCACCTGGGTGGGGAGGACTTTGACAACAGGCTGGTGAACCAC TTCGTGGAGGAGTTCAAGAGAAAACACAAGAAGGACATCAGCCAGAACAAGCGAGCCGTG AGGCGGCTGCGCACCGCCTGCGAGAGGGCCAAGAGGACCCTGTCGTCCAGCACCCAGGCC AGCCTGGAGATCGACTCCCTGTTTGAGGGCATCGACTTCTACACGTCCATCACCAGGGCG AGGTTCGAGGAGCTGTGCTCCGACCTGTTCCGAAGCACCCTGGAGCCCGTGGAGAAGGCT CTGCGCGACGCCAAGCTGGACAAGGCCCAGATTCACGACCTGGTCCTGGTCGGGGGCTCC ACCCGCATCCCCAAGGTGCAGAAGCTGCTGCAGGACTTCTTCAACGGGCGCGACCTGAAC AAGAGCATCAACCCCGACGAGGCTGTGGCCTACGGGGCGGCGGTGCAGGCGGCCATCCTG ATGGGGGACAAGTCCGAGAACGTGCAGGACCTGCTGCTGCTGGACGTGGCTCCCCTGTCG CTGGGGCTGGAGACGGCCGGAGGCGTGATGACTGCCCTGATCAAGCGCAACTCCACCATC CCCACCAAGCAGACGCAGATCTTCACCACCTACTCCGACAACCAACCCGGGGTGCTGATC CAGGTGTACGAGGGCGAGAGGGCCATGACGAAAGACAACAATCTGTTGGGGCGCTTCGAG CTGAGCGGCATCCCTCCGGCCCCCAGGGGCGTGCCCCAGATCGAGGTGACCTTCGACATC GATGCCAACGGCATCCTGAACGTCACGGCCACGGACAAGAGCACCGGCAAGGCCAACAAG ATCACCATCACCAACGACAAGGGCCGCCTGAGCAAGGAGGAGATCGAGCGCATGGTGCAG GAGGCGGAGAAGTACAAAGCGGAGGACGAGGTGCAGCGCGAGAGGGTGTCAGCCAAGAAC GCCCTGGAGTCCTACGCCTTCAACATGAAGAGCGCCGTGGAGGATGAGGGGCTCAAGGGC AAGATCAGCGAGGCCGACAAGAAGAAGGTGCTGGACAAGTGTCAAGAGGTCATCTCGTGG CTGGACGCCAACACCTTGGCCGAGAAGGACGAGTTTGAGCACAAGAGGAAGGAGCTGGAG CAGGTGTGTAACCCCATCATCAGCGGACTGTACCAGGGTGCCGGTGGTCCCGGGCCTGGG GGCTTCGGGGCTCAGGGTCCCAAGGGAGGGTCTGGGTCAGGCCCCACCATTGAGGAGGTA GATTAG >chr6_cox_hap1_111|geneid_v1.2_predicted_protein_111|642_AA MAKAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEIS SMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAA IAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNH FVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRA RFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLN KSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTI PTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFELSGIPPAPRGVPQIEVTFDI DANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRERVSAKN ALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELE QVCNPIISGLYQGAGGPGPGGFGAQGPKGGSGSGPTIEEVD* # Gene 112 (Forward). 1 exons. 642 aa. Score = 146.05 Single 3241817 3243742 146.05 + 0 0 3.10 0.00 372.96 0.00 AA 1:642 chr6_cox_hap1_112 >chr6_cox_hap1_112|geneid_v1.2_predicted_cDNA_112|1926_NN ATGGCCAAAGCCGCGGCGATCGGCATCGACCTGGGCACCACCTACTCCTGCGTGGGGGTG TTCCAACACGGCAAGGTGGAGATCATCGCCAACGACCAGGGCAACCGCACCACCCCCAGC TACGTGGCCTTCACGGACACCGAGCGGCTCATCGGGGATGCGGCCAAGAACCAGGTGGCG CTGAACCCGCAGAACACCGTGTTTGACGCGAAGCGGCTGATCGGCCGCAAGTTCGGCGAC CCGGTGGTGCAGTCGGACATGAAGCACTGGCCTTTCCAGGTGATCAACGACGGAGACAAG CCCAAGGTGCAGGTGAGCTACAAGGGGGAGACCAAGGCATTCTACCCCGAGGAGATCTCG TCCATGGTGCTGACCAAGATGAAGGAGATCGCCGAGGCGTACCTGGGCTACCCGGTGACC AACGCGGTGATCACCGTGCCGGCCTACTTCAACGACTCGCAGCGCCAGGCCACCAAGGAT GCGGGTGTGATCGCGGGGCTCAACGTGCTGCGGATCATCAACGAGCCCACGGCCGCCGCC ATCGCCTACGGCCTGGACAGAACGGGCAAGGGGGAGCGCAACGTGCTCATCTTTGACCTG GGCGGGGGCACCTTCGACGTGTCCATCCTGACGATCGACGACGGCATCTTCGAGGTGAAG GCCACGGCCGGGGACACCCACCTGGGTGGGGAGGACTTTGACAACAGGCTGGTGAACCAC TTCGTGGAGGAGTTCAAGAGAAAACACAAGAAGGACATCAGCCAGAACAAGCGAGCCGTG AGGCGGCTGCGCACCGCCTGCGAGAGGGCCAAGAGGACCCTGTCGTCCAGCACCCAGGCC AGCCTGGAGATCGACTCCCTGTTTGAGGGCATCGACTTCTACACGTCCATCACCAGGGCG AGGTTCGAGGAGCTGTGCTCCGACCTGTTCCGAAGCACCCTGGAGCCCGTGGAGAAGGCT CTGCGCGACGCCAAGCTGGACAAGGCCCAGATTCACGACCTGGTCCTGGTCGGGGGCTCC ACCCGCATCCCCAAGGTGCAGAAGCTGCTGCAGGACTTCTTCAACGGGCGCGACCTGAAC AAGAGCATCAACCCCGACGAGGCTGTGGCCTACGGGGCGGCGGTGCAGGCGGCCATCCTG ATGGGGGACAAGTCCGAGAACGTGCAGGACCTGCTGCTGCTGGACGTGGCTCCCCTGTCG CTGGGGCTGGAGACGGCCGGAGGCGTGATGACTGCCCTGATCAAGCGCAACTCCACCATC CCCACCAAGCAGACGCAGATCTTCACCACCTACTCCGACAACCAACCCGGGGTGCTGATC CAGGTGTACGAGGGCGAGAGGGCCATGACGAAAGACAACAATCTGTTGGGGCGCTTCGAG CTGAGCGGCATCCCTCCGGCCCCCAGGGGCGTGCCCCAGATCGAGGTGACCTTCGACATC GATGCCAACGGCATCCTGAACGTCACGGCCACGGACAAGAGCACCGGCAAGGCCAACAAG ATCACCATCACCAACGACAAGGGCCGCCTGAGCAAGGAGGAGATCGAGCGCATGGTGCAG GAGGCGGAGAAGTACAAAGCGGAGGACGAGGTGCAGCGCGAGAGGGTGTCAGCCAAGAAC GCCCTGGAGTCCTACGCCTTCAACATGAAGAGCGCCGTGGAGGATGAGGGGCTCAAGGGC AAGATCAGCGAGGCGGACAAGAAGAAGGTTCTGGACAAGTGTCAAGAGGTCATCTCGTGG CTGGACGCCAACACCTTGGCCGAGAAGGACGAGTTTGAGCACAAGAGGAAGGAGCTGGAG CAGGTGTGTAACCCCATCATCAGCGGACTGTACCAGGGTGCCGGTGGTCCCGGGCCTGGC GGCTTCGGGGCTCAGGGTCCCAAGGGAGGGTCTGGGTCAGGCCCTACCATTGAGGAGGTG GATTAG >chr6_cox_hap1_112|geneid_v1.2_predicted_protein_112|642_AA MAKAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEIS SMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAA IAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNH FVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRA RFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLN KSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTI PTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFELSGIPPAPRGVPQIEVTFDI DANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRERVSAKN ALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELE QVCNPIISGLYQGAGGPGPGGFGAQGPKGGSGSGPTIEEVD* # Gene 113 (Reverse). 6 exons. 382 aa. Score = 21.38 Terminal 3273750 3273976 4.11 - 2 0 0.00 4.79 15.58 0.00 AA 307:382 chr6_cox_hap1_113 Internal 3274073 3274295 8.14 - 0 1 2.93 3.67 22.94 0.00 AA 233:307 chr6_cox_hap1_113 Internal 3274470 3274652 4.50 - 0 0 1.36 3.19 16.94 0.00 AA 172:232 chr6_cox_hap1_113 Internal 3275321 3275481 0.04 - 2 0 1.69 4.79 2.89 0.00 AA 118:171 chr6_cox_hap1_113 Internal 3276030 3276222 5.72 - 0 1 -0.07 4.46 20.20 0.00 AA 54:118 chr6_cox_hap1_113 First 3276649 3276807 -1.13 - 0 0 2.85 -0.10 5.56 0.00 AA 1: 53 chr6_cox_hap1_113 >chr6_cox_hap1_113|geneid_v1.2_predicted_cDNA_113|1146_NN ATGACTGGGGAGCGACCCAGCACGGCGCTCCCGGACAGACGCTGGGGGCCGCGGATTCTG GGCTTCTGGGGAGGCTGTAGGGTTTGGGTGTTTGCCGCGATCTTCCTGCTGCTGTCTCTG GCAGCCTCCTGGTCCAAGGCTGAGAACGACTTCGGTCTGGTGCAGCCGCTGGTGACCATG GAGCAACTGCTGTGGGTGAGCGGGAGACAGATCGGCTCAGTGGACACCTTCCGCATCCCG CTCATCACAGCCACTCCGCGGGGCACTCTTCTCGCCTTTGCTGAGGCGAGGAAAATGTCC TCATCCGATGAGGGGGCCAAGTTCATCGCCCTGCGGAGGTCCATGGACCAGGGCAGCACA TGGTCTCCTACAGCGTTCATTGTCAATGATGGGGATGTCCCCGATGGGCTGAACCTTGGG GCAGTAGTGAGCGATGTTGAGACAGGAGTAGTATTTCTTTTCTACTCCCTTTGTGCTCAC AAGGCCGGCTGCCAGGTGGCCTCTACCATGTTGAAACAGCGGGAGCCACGGAAGGGCCGC CTCATCGTGTGTGGCCATGGGACGCTGGAGCGGGACGGAGTCTTCTGTCTCCTCAGCGAT GATCATGGTGCCTCCTGGCGCTACGGAAGTGGGGTCAGCGGCATCCCCTACGGTCAGCCC AAGCAGGAAAATGATTTCAATCCTGATGAATGCCAGCCCTATGAGCTCCCAGATGGCTCA GTCGTCATCAATGCCCGAAACCAGAACAACTACCACTGCCACTGCCGAATTGTCCTCCGC AGCTATGATGCCTGTGATACACTAAGGCCCCGTGATGTGACCTTCGACCCTGAGCTCGTG GACCCTGTGGTAGCTGCAGGAGCTGTAGTCACCAGCTCCGGCATTGTCTTCTTCTCCAAC CCAGCACATCCAGAGTTCCGAGTGAACCTGACCCTGCGATGGAGCTTCAGCAATGGTACC TCATGGCGGAAAGAGACAGTCCAGCTATGGCCAGGCCCCAGTGGCTATTCATCCCTGGCA ACCCTGGAGGGCAGCATGGATGGAGAGGAGCAGGCCCCCCAGCTCTACGTCCTGTATGAG AAAGGCCGGAACCACTACACAGAGAGCATCTCCGTGGCCAAAATCAGTGTCTATGGGACA CTCTGA >chr6_cox_hap1_113|geneid_v1.2_predicted_protein_113|382_AA MTGERPSTALPDRRWGPRILGFWGGCRVWVFAAIFLLLSLAASWSKAENDFGLVQPLVTM EQLLWVSGRQIGSVDTFRIPLITATPRGTLLAFAEARKMSSSDEGAKFIALRRSMDQGST WSPTAFIVNDGDVPDGLNLGAVVSDVETGVVFLFYSLCAHKAGCQVASTMLKQREPRKGR LIVCGHGTLERDGVFCLLSDDHGASWRYGSGVSGIPYGQPKQENDFNPDECQPYELPDGS VVINARNQNNYHCHCRIVLRSYDACDTLRPRDVTFDPELVDPVVAAGAVVTSSGIVFFSN PAHPEFRVNLTLRWSFSNGTSWRKETVQLWPGPSGYSSLATLEGSMDGEEQAPQLYVLYE KGRNHYTESISVAKISVYGTL* # Gene 114 (Reverse). 16 exons. 571 aa. Score = 35.79 Terminal 3277658 3277779 5.81 - 2 0 0.00 0.11 26.85 0.00 AA 531:571 chr6_cox_hap1_114 Internal 3279041 3279111 3.14 - 1 1 3.49 2.50 11.36 0.00 AA 507:531 chr6_cox_hap1_114 Internal 3279346 3279419 2.08 - 0 2 1.27 4.09 9.65 0.00 AA 483:507 chr6_cox_hap1_114 Internal 3279529 3279632 1.25 - 2 0 2.15 2.03 9.35 0.00 AA 448:482 chr6_cox_hap1_114 Internal 3279721 3279815 0.37 - 1 1 4.73 0.21 6.03 0.00 AA 416:448 chr6_cox_hap1_114 Internal 3279904 3280157 3.47 - 0 2 3.53 3.86 10.10 0.00 AA 332:416 chr6_cox_hap1_114 Internal 3284559 3284740 2.96 - 2 0 -0.91 3.50 16.02 0.00 AA 271:331 chr6_cox_hap1_114 Internal 3284850 3285085 8.38 - 1 1 1.84 3.12 26.00 0.00 AA 192:271 chr6_cox_hap1_114 Internal 3285352 3285435 1.66 - 1 2 1.32 3.85 8.88 0.00 AA 164:192 chr6_cox_hap1_114 Internal 3285512 3285599 -1.51 - 2 2 2.99 1.36 2.20 0.00 AA 135:164 chr6_cox_hap1_114 Internal 3288498 3288558 -0.23 - 0 1 3.89 3.95 0.16 0.00 AA 115:135 chr6_cox_hap1_114 Internal 3288967 3289066 3.30 - 1 0 1.37 3.84 12.93 0.00 AA 81:114 chr6_cox_hap1_114 Internal 3289890 3289968 0.04 - 2 2 2.74 3.61 3.09 0.00 AA 55: 81 chr6_cox_hap1_114 Internal 3290094 3290167 1.64 - 1 1 3.49 4.08 5.23 0.00 AA 30: 55 chr6_cox_hap1_114 Internal 3291072 3291120 2.01 - 2 2 3.60 4.20 5.82 0.00 AA 14: 30 chr6_cox_hap1_114 First 3292979 3293018 1.43 - 0 1 3.32 1.93 8.20 0.00 AA 1: 14 chr6_cox_hap1_114 >chr6_cox_hap1_114|geneid_v1.2_predicted_cDNA_114|1713_NN ATGGGGGGAAAGCAGCGGGACGAGGATGACGAGGCCTACGGGAAGCCAGTCAAATACGAC CCCTCCTTTCGAGGCCCCATCAAGAACAGAAGCTGCACAGATGTCATCTGCTGCGTCCTC TTCCTGCTCTTCATTCTAGGTTACATCGTGGTGGGGATTGTGGCCTGGTTGTATGGAGAC CCCCGGCAAGTCCTCTACCCCAGGAACTCTACTGGGGCCTACTGTGGCATGGGGGAGAAC AAAGATAAGCCGTATCTCCTGTACTTCAACATCTTCAGCTGCATCCTGTCCAGCAACATC ATCTCAGTTGCTGAGAACGGCCTACAGTGCCCCACACCCCAGACGGTGATCACAAGCCTG CAACAGGAACTCTGCCCCAGTTTCCTCCTCCCCTCTGCTCCAGCTCTGGGGCGCTGCTTT CCATGGACCAACGTTACTCCACCGGCGCTCCCAGGGATCACCAATGACACCACCATACAG CAGGGGATCAGCGGTCTTATTGACAGCCTCAATGCCCGAGACATCAGTGTTAAGATCTTT GAAGATTTTGCCCAGTCCTGGTATTGGATTCTTGTTGCCCTGGGGGTGGCTCTGGTCTTG AGCCTACTGTTTATCTTGCTTCTGCGCCTGGTGGCTGGGCCCCTGGTGCTGGTGCTGATC CTGGGAGTGCTGGGCGTGCTGGCATACGGCATCTACTACTGCTGGGAGGAGTACCGAGTG CTGCGGGACAAGGGCGCCTCCATCTCCCAGCTGGGTTTCACCACCAACCTCAGTGCCTAC CAGAGCGTGCAGGAGACCTGGCTGGCCGCCCTGATCGTGTTGGCGGTGCTTGAAGCCATC CTGCTGCTGATGCTCATCTTCCTGCGGCAGCGGATTCGTATTGCCATCGCCCTCCTGAAG GAGGCCAGCAAGTTAGGGCCTGCCTGGGAGGGAGATGGGGTTGAGGACAGCGTGGACCCA GGAGTGCTAGGGGACCTAGGGGGTGCTAGAGAGGCCCACCTTGTGAACTCCTCGTGCCCA GGGCTGATGTGCGTCTTCCAGGGCTACTCATCCAAAGGCCTAATCCAACGTTCTGTCTTC AATCTGCAAATCTATGGGGTCCTGGGGCTCTTCTGGACCCTTAACTGGGTACTGGCCCTG GGCCAATGCGTCCTCGCTGGAGCCTTTGCCTCCTTCTACTGGGCCTTCCACAAGCCCCAG GACATCCCTACCTTCCCCTTAATCTCTGCCTTCATCCGCACACTCCGTTACCACACTGGG TCATTGGCATTTGGAGCCCTCATCCTGACCCTTGTGCAGATAGCCCGGGTCATCTTGGAG TATATTGACCACAAGCTCAGAGGAGTGCAGAACCCTGTAGCCCGCTGCATCATGTGCTGT TTCAAGTGCTGCCTCTGGTGTCTGGAAAAATTTATCAAGTTCCTAAACCGCAATGCATAC ATCATGATCGCCATCTACGGGAAGAATTTCTGTGTCTCAGCCAAAAATGCGTTCATGCTA CTCATGCGAAACATTGTCAGGGTGGTCGTCCTGGACAAAGTCACAGACCTGCTGCTGTTC TTTGGGAAGCTGCTGGTGGTCGGAGGCGTGGTGGAAGACCTGGAGCGGAACAACGGCTCC CTGGACCGGCCCTACTACATGTCCAAGAGCCTTCTAAAGATTCTGGGCAAGAAGAACGAG GCGCCCCCGGACAACAAGAAGAGGAAGAAGTGA >chr6_cox_hap1_114|geneid_v1.2_predicted_protein_114|571_AA MGGKQRDEDDEAYGKPVKYDPSFRGPIKNRSCTDVICCVLFLLFILGYIVVGIVAWLYGD PRQVLYPRNSTGAYCGMGENKDKPYLLYFNIFSCILSSNIISVAENGLQCPTPQTVITSL QQELCPSFLLPSAPALGRCFPWTNVTPPALPGITNDTTIQQGISGLIDSLNARDISVKIF EDFAQSWYWILVALGVALVLSLLFILLLRLVAGPLVLVLILGVLGVLAYGIYYCWEEYRV LRDKGASISQLGFTTNLSAYQSVQETWLAALIVLAVLEAILLLMLIFLRQRIRIAIALLK EASKLGPAWEGDGVEDSVDPGVLGDLGGAREAHLVNSSCPGLMCVFQGYSSKGLIQRSVF NLQIYGVLGLFWTLNWVLALGQCVLAGAFASFYWAFHKPQDIPTFPLISAFIRTLRYHTG SLAFGALILTLVQIARVILEYIDHKLRGVQNPVARCIMCCFKCCLWCLEKFIKFLNRNAY IMIAIYGKNFCVSAKNAFMLLMRNIVRVVVLDKVTDLLLFFGKLLVVGGVVEDLERNNGS LDRPYYMSKSLLKILGKKNEAPPDNKKRKK* # Gene 115 (Reverse). 23 exons. 1006 aa. Score = 90.40 Terminal 3294122 3294302 6.84 - 1 0 0.00 4.62 22.68 0.00 AA 946:1006 chr6_cox_hap1_115 Internal 3294711 3294886 7.74 - 0 2 2.00 1.37 26.79 0.00 AA 888:946 chr6_cox_hap1_115 Internal 3295052 3295130 3.09 - 1 0 3.89 3.29 9.46 0.00 AA 861:887 chr6_cox_hap1_115 Internal 3296737 3296823 2.51 - 1 2 2.30 3.71 9.77 0.00 AA 832:861 chr6_cox_hap1_115 Internal 3296932 3297047 2.50 - 0 2 1.58 3.46 11.21 0.00 AA 794:832 chr6_cox_hap1_115 Internal 3297400 3297477 2.55 - 0 0 3.24 3.31 9.05 0.00 AA 768:793 chr6_cox_hap1_115 Internal 3297844 3297988 11.40 - 1 0 5.16 5.02 25.73 0.00 AA 719:767 chr6_cox_hap1_115 Internal 3298430 3298597 4.45 - 1 2 2.74 4.12 13.34 0.00 AA 663:719 chr6_cox_hap1_115 Internal 3298683 3298837 6.15 - 0 2 0.27 4.79 20.29 0.00 AA 612:663 chr6_cox_hap1_115 Internal 3298929 3299054 5.48 - 0 0 3.35 5.47 12.97 0.00 AA 570:611 chr6_cox_hap1_115 Internal 3300619 3300720 3.72 - 0 0 2.20 4.36 11.96 0.00 AA 536:569 chr6_cox_hap1_115 Internal 3300813 3300935 3.95 - 0 0 1.18 2.84 16.35 0.00 AA 495:535 chr6_cox_hap1_115 Internal 3301033 3301139 4.21 - 2 0 1.55 1.49 18.45 0.00 AA 459:494 chr6_cox_hap1_115 Internal 3301615 3301697 2.56 - 1 1 1.76 3.25 11.38 0.00 AA 431:459 chr6_cox_hap1_115 Internal 3301817 3301999 1.58 - 1 2 5.16 2.17 5.43 0.00 AA 370:431 chr6_cox_hap1_115 Internal 3302079 3302314 0.38 - 0 2 2.12 4.29 3.84 0.00 AA 292:370 chr6_cox_hap1_115 Internal 3302401 3302544 4.79 - 0 0 4.68 0.71 16.39 0.00 AA 244:291 chr6_cox_hap1_115 Internal 3302637 3302785 3.25 - 2 0 2.02 1.56 15.26 0.00 AA 194:243 chr6_cox_hap1_115 Internal 3303266 3303380 5.03 - 0 1 3.87 4.22 12.94 0.00 AA 156:194 chr6_cox_hap1_115 Internal 3306445 3306600 5.30 - 0 0 3.69 3.99 14.22 0.00 AA 104:155 chr6_cox_hap1_115 Internal 3306732 3306772 1.01 - 2 0 2.90 6.05 1.60 0.00 AA 90:103 chr6_cox_hap1_115 Internal 3310644 3310862 1.10 - 2 1 2.78 5.55 2.75 0.00 AA 17: 90 chr6_cox_hap1_115 First 3310961 3311009 0.80 - 0 1 5.16 1.82 4.03 0.00 AA 1: 17 chr6_cox_hap1_115 >chr6_cox_hap1_115|geneid_v1.2_predicted_cDNA_115|3018_NN ATGGGGGCGCTGCTGCTGGAGAAGGAAACCAGAGGAGCCACCGAGAGAGTTCATGGCTCT TTGGGGGACACCCCTCGTAGTGAAGAAACCCTGCCCAAGGCCACCCCCGACTCCCTGGAG CCTGCTGGCCCCTCATCTCCAGCCTCTGTCACTGTCACTGTTGGTGATGAGGGGGCTGAC ACCCCTGTAGGGGCTACACCACTCATTGGGGATGAATCTGAGAATCTTGAGGGAGATGGG GACCTCCGTGGGGGCCGGATCCTGCTGGATCTGGCCAAAAGGAGGAAGCTGAACTCAGGA GGTGGCCTGTCAGAGGAGTTAGGTTCTGCCCGGCGTTCAGGAGAAGTGACCCTGACGAAA GGGGACCCCGGGTCCCTGGAGGAGTGGGAGACGGTGGTGGGTGATGACTTCAGTCTCTAC TATGATTCCTACTCTGTGGATGAGCGCGTGGACTCCGACAGCAAGAGTGGTTCCAGTGGC CGGCGCAAGGCCAAGAAGAAATGGCGAAAAGACAGCCCATGGGTGAAGCCGTCTCGGAAA CGGCGCAAGCGGGAGCCTCCGCGGGCCAAGGAGCCACGAGGGGTGTCCAATGACACATCT TCGCTGGAGACAGAGCGAGGGTTTGAGGAGTTGCCCCTGTGCAGCTGCCGCATGGAGGCA CCCAAGATTGACCGCATCAGCGAGAGGGCGGGGCACAAGTGCATGGCCACTGAGAGTGTG GACGGAGAGCTGTCAGGCTGCAATGCCGCCATCCTCAAGCGGGAGACCATGAGGCCATCC AGCCGTGTGGCCCTGATGGTGCTCTGTGAGACCCACCGCGCCCGCATGGTCAAACACCAC TGCTGCCCGGGCTGCGGCTACTTCTGCACGGCGGGCACCTTCCTGGAGTGCCACCCTGAC TTCCGTGTGGCCCACCGCTTCCACAAGGCCTGTGTGTCTCAGCTGAATGGGATGGTCTTC TGTCCCCACTGTGGGGAGGATGCTTCTGAAGCTCAAGAGGTGACCATCCCCCGGGGTGAC GGGGTGACCCCACCGGCCGGCACTGCAGCTCCTGCACCCCCACCCCTGTCCCAGGATGTC CCCGGGAGAGCAGACACTTCTCAGCCCAGTGCCCGGATGCGAGGGCATGGGGAACCCCGG CGCCCGCCCTGCGATCCCCTGGCTGACACCATTGACAGCTCAGGGCCCTCCCTGACCCTG CCCAATGGGGGCTGCCTTTCAGCCGTGGGGCTGCCACTGGGGCCAGGCCGGGAGGCCCTG GAAAAGGCCCTGGTCATCCAGGAGTCAGAGAGGCGGAAGAAGCTCCGTTTCCACCCTCGG CAGTTGTACCTGTCCGTGAAGCAGGGCGAGCTGCAGAAGGTGATCCTGATGCTGTTGGAC AACCTGGACCCCAACTTCCAGAGCGACCAGCAGAGCAAGCGCACGCCCCTGCATGCAGCC GCCCAGAAGGGCTCCGTGGAGATCTGCCATGTGCTGCTGCAGGCTGGAGCCAACATAAAT GCAGTGGACAAACAGCAGCGGACGCCACTGATGGAGGCCGTGGTGAACAACCACCTGGAG GTAGCCCGTTACATGGTGCAGCGTGGTGGCTGTGTCTATAGCAAGGAGGAGGACGGTTCC ACCTGCCTCCACCACGCAGCCAAAATCGGGAACTTGGAGATGGTCAGCCTGCTGCTGAGC ACAGGACAGGTGGACGTCAACGCCCAGGACAGTGGGGGGTGGACGCCCATCATCTGGGCT GCAGAGCACAAGCACATCGAGGTGATCCGCATGCTACTGACGCGGGGCGCCGACGTCACC CTCACTGACAACGTGAGTGAGCGTTTGGTTGAGGAGGAGAACATCTGCCTGCACTGGGCC TCCTTCACGGGCAGCGCCGCCATCGCCGAAGTCCTTCTGAATGCGCGCTGTGACCTCCAT GCTGTCAACTACCATGGGGACACCCCCCTGCACATCGCAGCTCGGGAGAGCTACCATGAC TGCGTGCTGTTATTCCTGTCACGTGGGGCCAACCCTGAGCTGCGGAACAAAGAGGGGGAC ACAGCATGGGACCTGACTCCCGAGCGCTCCGACGTGTGGTTTGCGCTTCAACTCAACCGC AAGCTCCGACTTGGGGTGGGAAATCGGGCCATCCGCACAGAGAAGATCATCTGCCGGGAC GTGGCTCGGGGCTATGAGAACGTGCCCATTCCCTGTGTCAACGGTGTGGATGGGGAGCCC TGCCCTGAGGATTACAAGTACATCTCAGAGAACTGCGAGACGTCCACCATGAACATCGAT CGCAACATCACCCACCTGCAGCACTGCACGTGTGTGGACGACTGCTCTAGCTCCAACTGC CTGTGCGGCCAGCTCAGCATCCGGTGCTGGTATGACAAGGATGGGCGATTGCTCCAGGAA TTTAACAAGATTGAGCCTCCGCTGATTTTCGAGTGTAACCAGGCGTGCTCATGCTGGAGA AACTGCAAGAACCGGGTCGTACAGAGTGGCATCAAGGTGCGGCTACAGCTCTACCGAACA GCCAAGATGGGCTGGGGGGTCCGCGCCCTGCAGACCATCCCACAGGGGACCTTCATCTGC GAGTATGTCGGGGAGCTGATCTCTGATGCTGAGGCTGATGTGAGAGAGGATGATTCTTAC CTCTTCGACTTAGACAACAAGGATGGAGAGGTGTACTGCATAGATGCCCGTTACTATGGC AACATCAGCCGCTTCATCAACCACCTGTGTGACCCCAACATCATTCCCGTCCGGGTCTTC ATGCTGCACCAAGACCTGCGATTTCCACGCATCGCCTTCTTCAGTTCCCGAGACATCCGG ACTGGGGAGGAGCTAGGGTTTGACTATGGCGACCGCTTCTGGGACATCAAAAGCAAATAT TTCACCTGCCAATGTGGCTCTGAGAAGTGCAAGCACTCAGCCGAAGCCATTGCCCTGGAG CAGAGCCGTCTGGCCCGCCTGGACCCACACCCTGAGCTGCTGCCCGAGCTCGGCTCCCTG CCCCCTGTCAACACATGA >chr6_cox_hap1_115|geneid_v1.2_predicted_protein_115|1006_AA MGALLLEKETRGATERVHGSLGDTPRSEETLPKATPDSLEPAGPSSPASVTVTVGDEGAD TPVGATPLIGDESENLEGDGDLRGGRILLDLAKRRKLNSGGGLSEELGSARRSGEVTLTK GDPGSLEEWETVVGDDFSLYYDSYSVDERVDSDSKSGSSGRRKAKKKWRKDSPWVKPSRK RRKREPPRAKEPRGVSNDTSSLETERGFEELPLCSCRMEAPKIDRISERAGHKCMATESV DGELSGCNAAILKRETMRPSSRVALMVLCETHRARMVKHHCCPGCGYFCTAGTFLECHPD FRVAHRFHKACVSQLNGMVFCPHCGEDASEAQEVTIPRGDGVTPPAGTAAPAPPPLSQDV PGRADTSQPSARMRGHGEPRRPPCDPLADTIDSSGPSLTLPNGGCLSAVGLPLGPGREAL EKALVIQESERRKKLRFHPRQLYLSVKQGELQKVILMLLDNLDPNFQSDQQSKRTPLHAA AQKGSVEICHVLLQAGANINAVDKQQRTPLMEAVVNNHLEVARYMVQRGGCVYSKEEDGS TCLHHAAKIGNLEMVSLLLSTGQVDVNAQDSGGWTPIIWAAEHKHIEVIRMLLTRGADVT LTDNVSERLVEEENICLHWASFTGSAAIAEVLLNARCDLHAVNYHGDTPLHIAARESYHD CVLLFLSRGANPELRNKEGDTAWDLTPERSDVWFALQLNRKLRLGVGNRAIRTEKIICRD VARGYENVPIPCVNGVDGEPCPEDYKYISENCETSTMNIDRNITHLQHCTCVDDCSSSNC LCGQLSIRCWYDKDGRLLQEFNKIEPPLIFECNQACSCWRNCKNRVVQSGIKVRLQLYRT AKMGWGVRALQTIPQGTFICEYVGELISDAEADVREDDSYLFDLDNKDGEVYCIDARYYG NISRFINHLCDPNIIPVRVFMLHQDLRFPRIAFFSSRDIRTGEELGFDYGDRFWDIKSKY FTCQCGSEKCKHSAEAIALEQSRLARLDPHPELLPELGSLPPVNT* # Gene 116 (Reverse). 3 exons. 404 aa. Score = 49.53 Terminal 3313964 3314350 20.55 - 0 0 0.00 -2.89 68.21 0.00 AA 276:404 chr6_cox_hap1_116 Internal 3314630 3315363 29.04 - 2 0 0.74 3.19 79.19 0.00 AA 31:275 chr6_cox_hap1_116 First 3316300 3316390 -0.06 - 0 1 2.23 4.67 1.98 0.00 AA 1: 31 chr6_cox_hap1_116 >chr6_cox_hap1_116|geneid_v1.2_predicted_cDNA_116|1212_NN ATGGGCAGCCGGGATTGGGGGGCGGGCCCGAGTGAGCGGGCCTCCGCGCGGCACTTGGCA CGCACGCGCAAACTGGCCGCGGGGCTTGGAGGGTTGCCCACCCCCGCCACAATGGCCTCT GGGGTGGAAGTCCTGCGCTTCCAGCTGCCCGGCCACGAGGCCGCAACGCTACGGAACATG AACCAGCTCCGGGCAGAGGAGCGGTTCTGCGACGTGACCATTGTGGCCGACAGCCTCAAG TTTCGAGGCCACAAGGTCATCTTGGCCGCCTGCTCACCCTTCCTGCGGGACCAGTTCCTG CTGAACCCCAGCTCGGAGCTGCAGGTCTCCCTGATGCACAGTGCACGCATCGTGGCCGAC TTGCTCCTCTCCTGCTACACGGGCGCCTTGGAATTCGCTGTTAGGGACATCGTCAACTAC CTTACAGCCGCCTCCTACCTGCAGATGGAGCACGTGGTGGAGAAATGCCGGAATGCCCTC AGCCAGTTCATTGAGCCCAAAATAGGCCTCAAAGAGGATGGGGTCAGTGAGGCTAGCCTT GTGAGCAGCATCAGCGCCACCAAGTCCCTCCTCCCTCCAGCCAGGACCCCAAAGCCAGCC CCGAAGCCCCCACCCCCACCTCCTCTACCCCCTCCACTCCTGCGGCCAGTGAAGCTGGAG TTCCCACTGGATGAAGACTTGGAGCTGAAAGCCGAGGAAGAGGATGAGGATGAGGATGAG GACGTGTCTGACATCTGCATCGTCAAGGTGGAGTCGGCCCTGGAGGTGGCACACCGGCTC AAACCCCCTGGAGGCCTGGGAGGGGGTCTGGGCATTGGAGGCTCCAACATCAAGTGCACC AAGTGCCCGGAAGTGTTCCAGGGCGTGGAGAAGCTGGTCTTCCACATGCGGGCGCAGCAC TTCATCTTCATGTGCCCTCGCTGTGGCAAGCAGTTCAACCACAGCAGCAACCTCAACCGC CACATGAACGTGCATCGTGGTGTCAAGTCACACTCGTGCGGCATCTGCGGCAAGTGCTTC ACACAGAAGTCCACCCTTCACGACCACCTCAACCTGCACTCGGGAGCGCGGCCCTACCGC TGCTCCTACTGCGACGTGCGCTTCGCCCACAAGCCTGCCATTAGGCGGCACCTCAAGGAG CAACACGGCAAGACCACGGCCGAGAACGTGCTGGAGGCCAGTGTGGCCGAGATTAACGTC CTCATCCGCTAG >chr6_cox_hap1_116|geneid_v1.2_predicted_protein_116|404_AA MGSRDWGAGPSERASARHLARTRKLAAGLGGLPTPATMASGVEVLRFQLPGHEAATLRNM NQLRAEERFCDVTIVADSLKFRGHKVILAACSPFLRDQFLLNPSSELQVSLMHSARIVAD LLLSCYTGALEFAVRDIVNYLTAASYLQMEHVVEKCRNALSQFIEPKIGLKEDGVSEASL VSSISATKSLLPPARTPKPAPKPPPPPPLPPPLLRPVKLEFPLDEDLELKAEEEDEDEDE DVSDICIVKVESALEVAHRLKPPGGLGGGLGIGGSNIKCTKCPEVFQGVEKLVFHMRAQH FIFMCPRCGKQFNHSSNLNRHMNVHRGVKSHSCGICGKCFTQKSTLHDHLNLHSGARPYR CSYCDVRFAHKPAIRRHLKEQHGKTTAENVLEASVAEINVLIR* # Gene 117 (Forward). 30 exons. 1234 aa. Score = 55.95 First 3335546 3335583 -1.44 + 0 2 1.37 1.64 4.40 0.00 AA 1: 13 chr6_cox_hap1_117 Internal 3341783 3341838 -0.92 + 1 1 3.76 2.80 0.34 0.00 AA 13: 32 chr6_cox_hap1_117 Internal 3342772 3342957 2.21 + 2 1 4.95 2.46 6.92 0.00 AA 32: 94 chr6_cox_hap1_117 Internal 3347650 3347823 3.73 + 2 1 5.01 2.62 10.39 0.00 AA 94:152 chr6_cox_hap1_117 Internal 3347907 3348005 1.00 + 2 1 4.42 3.29 3.42 0.00 AA 152:185 chr6_cox_hap1_117 Internal 3348206 3348339 0.37 + 2 0 3.02 -0.29 9.33 0.00 AA 185:229 chr6_cox_hap1_117 Internal 3349963 3350101 5.31 + 0 1 1.92 3.77 17.25 0.00 AA 230:276 chr6_cox_hap1_117 Internal 3351359 3351499 2.10 + 2 1 2.35 1.51 13.34 0.00 AA 276:323 chr6_cox_hap1_117 Internal 3353271 3353360 3.33 + 2 1 6.19 2.69 7.50 0.00 AA 323:353 chr6_cox_hap1_117 Internal 3356999 3357139 5.39 + 2 1 3.17 4.05 15.13 0.00 AA 353:400 chr6_cox_hap1_117 Internal 3357265 3357359 -0.47 + 2 0 2.71 1.74 4.63 0.00 AA 400:431 chr6_cox_hap1_117 Internal 3357456 3357567 3.23 + 0 1 3.72 3.81 9.28 0.00 AA 432:469 chr6_cox_hap1_117 Internal 3357684 3357849 2.50 + 2 2 1.43 0.29 16.17 0.00 AA 469:524 chr6_cox_hap1_117 Internal 3357957 3358033 0.51 + 1 1 5.70 3.49 -0.03 0.00 AA 524:550 chr6_cox_hap1_117 Internal 3358175 3358266 0.99 + 2 0 1.95 3.88 6.23 0.00 AA 550:580 chr6_cox_hap1_117 Internal 3358767 3358893 -0.17 + 0 1 1.55 2.86 5.46 0.00 AA 581:623 chr6_cox_hap1_117 Internal 3361047 3361232 4.76 + 2 1 2.17 4.11 14.98 0.00 AA 623:685 chr6_cox_hap1_117 Internal 3361388 3361561 0.34 + 2 1 2.82 1.42 6.99 0.00 AA 685:743 chr6_cox_hap1_117 Internal 3361985 3362121 0.57 + 2 0 0.15 -0.78 14.86 0.00 AA 743:788 chr6_cox_hap1_117 Internal 3362414 3362552 3.08 + 0 1 5.08 1.41 10.47 0.00 AA 789:835 chr6_cox_hap1_117 Internal 3362870 3363001 3.07 + 2 1 5.57 0.14 11.61 0.00 AA 835:879 chr6_cox_hap1_117 Internal 3363283 3363384 5.15 + 2 1 5.10 4.27 11.34 0.00 AA 879:913 chr6_cox_hap1_117 Internal 3363460 3363597 6.37 + 2 1 5.99 3.04 14.89 0.00 AA 913:959 chr6_cox_hap1_117 Internal 3364090 3364187 -1.99 + 2 0 2.98 0.48 2.36 0.00 AA 959:991 chr6_cox_hap1_117 Internal 3364326 3364443 2.18 + 0 1 4.29 4.01 5.49 0.00 AA 992:1031 chr6_cox_hap1_117 Internal 3364659 3364812 4.88 + 2 2 2.24 3.67 15.84 0.00 AA 1031:1082 chr6_cox_hap1_117 Internal 3364908 3364984 -0.27 + 1 1 5.69 1.99 0.32 0.00 AA 1082:1108 chr6_cox_hap1_117 Internal 3365184 3365284 0.33 + 2 0 -1.79 3.93 10.13 0.00 AA 1108:1141 chr6_cox_hap1_117 Internal 3365381 3365513 2.03 + 0 1 3.30 3.89 6.80 0.00 AA 1142:1186 chr6_cox_hap1_117 Terminal 3365595 3365740 -2.23 + 2 0 6.36 0.00 -2.62 0.00 AA 1186:1234 chr6_cox_hap1_117 >chr6_cox_hap1_117|geneid_v1.2_predicted_cDNA_117|3702_NN ATGCGCAAGGAGCTCCCAGCAGTCACTAAAGAGAAGACGGAGGACACCATGGGCCCACTG ATGGTTCTTTTTTGCCTGCTGTTCCTGTACCCAGCTGTGCGCTGTCCAGCCCCTGTCTCC TTTGAGAATGGCATTTATACCCCACGGCTGGGGTCCTATCCCGTGGGTGGCAATGTGAGC TTCGAGTGTGAGGATGGCTTCATATTGCGGGGCTCGCCTGTGCGTCAGTGTCGCCCCAAC GGCATGTGGGATGGAGAAACAGCTGTGTGTGATAATGGGGCTGGCCACTGCCCCAACCCA GGCATTTCACTGGGCGCAGTGCGGACAGGCTTCCGCTTTGGTCATGGGGACAAGGTCCGC TATCGCTGCTCCTCGAATCTTGTGCTCACGGGGTCTTCGGAGCGGGAGTGCCAGGGCAAC GGGGTCTGGAGTGGAACGGAGCCCATCTGCCGCCAACCCTACTCTTATGACTTCCCTGAG GACGTGGCCCCTGCCCTGGGCACTTCCTTCTCCCACATGCTTGGGGCCACCAATCCCACC CAGAAGACAAAGGAAAGCCTGGGCCGTAAAATCCAAATCCAGCGCTCTGGTCATCTGAAC CTCTACCTGCTCCTGGACTGTTCGCAGAGTGTGTCGGAAAATGACTTTCTCATCTTCAAG GAGAGCGCCTCCCTCATGGTGGACAGGATCTTCAGCTTTGAGATCAATGTGAGCGTTGCC ATTATCACCTTTGCCTCAGAGCCCAAAGTCCTCATGTCTGTCCTGAACGACAACTCCCGG GATATGACTGAGGTGATCAGCAGCCTGGAAAATGCCAACTATAAAGATCATGAAAATGGA ACTGGGACTAACACCTATGCGGCCTTAAACAGTGTCTATCTCATGATGAACAACCAAATG CGACTCCTCGGCATGGAAACGATGGCCTGGCAGGAAATCCGACATGCCATCATCCTTCTG ACAGATGGAAAGTCCAATATGGGTGGCTCTCCCAAGACAGCTGTTGACCATATCAGAGAG ATCCTGAACATCAACCAGAAGAGGAATGACTATCTGGACATCTATGCCATCGGGGTGGGC AAGCTGGATGTGGACTGGAGAGAACTGAATGAGCTAGGGTCCAAGAAGGATGGTGAGAGG CATGCCTTCATTCTGCAGGACACAAAGGCTCTGCACCAGGTCTTTGAACATATGCTGGAT GTCTCCAAGCTCACAGACACCATCTGCGGGGTGGGGAACATGTCAGCAAACGCCTCTGAC CAGGAGAGGACACCCTGGCATGTCACTATTAAGCCCAAGAGCCAAGAGACCTGCCGGGGG GCCCTCATCTCCGACCAATGGGTCCTGACAGCAGCTCATTGCTTCCGCGATGGCAACGAC CACTCCCTGTGGAGGGTCAATGTGGGAGACCCCAAATCCCAGTGGGGCAAAGAATTCCTT ATTGAGAAGGCGGTGATCTCCCCAGGGTTTGATGTCTTTGCCAAAAAGAACCAGGGAATC CTGGAGTTCTATGGTGATGACATAGCTCTGCTGAAGCTGGCCCAGAAAGTAAAGATGTCC ACCCATGCCAGGCCCATCTGCCTTCCCTGCACGATGGAGGCCAATCTGGCTCTGCGGAGA CCTCAAGGCAGCACCTGTAGGGACCATGAGAATGAACTGCTGAACAAACAGAGTGTTCCT GCTCATTTTGTCGCCTTGAATGGGAGCAAACTGAACATTAACCTTAAGATGGGAGTGGAG TGGACAAGCTGTGCCGAGGTTGTCTCCCAAGAAAAAACCATGTTCCCCAACTTGACAGAT GTCAGGGAGGTGGTGACAGACCAGTTCCTATGCAGTGGGACCCAGGAGGATGAGAGTCCC TGCAAGGCAATCCACTGTCCAAGACCACACGACTTCGAGAACGGGGAATACTGGCCCCGG TCTCCCTACTACAATGTGAGTGATGAGATCTCTTTCCACTGCTATGACGGTTACACTCTC CGGGGCTCTGCCAATCGCACCTGCCAAGTGAATGGCCGGTGGAGTGGGCAGACAGCGATC TGTGACAACGGAGCGGGGTACTGCTCCAACCCGGGCATCCCCATTGGCACAAGGAAGGTG GGCAGCCAGTACCGCCTTGAAGACAGCGTCACCTACCACTGCAGCCGGGGGCTTACCCTG CGTGGCTCCCAGCGGCGAACGTGTCAGGAAGGTGGCTCTTGGAGCGGGACGGAGCCTTCC TGCCAAGGGGAACAACAGAAGCGGAAGATCGTCCTGGACCCTTCAGGCTCCATGAACATC TACCTGGTGCTAGATGGATCAGACAGCATTGGGGCCAGCAACTTCACAGGAGCCAAAAAG TGTCTAGTCAACTTAATTGAGAAGGTGGCAAGTTATGGTGTGAAGCCAAGATATGGTCTA GTGACATATGCCACATACCCCAAAATTTGGGTCAAAGTGTCTGAAGCAGACAGCAGTAAT GCAGACTGGGTCACGAAGCAGCTCAATGAAATCAATTATGAAGACCACAAGTTGAAGTCA GGGACTAACACCAAGAAGGCCCTCCAGGCAGTGTACAGCATGATGAGCTGGCCAGATGAC GTCCCTCCTGAAGGCTGGAACCGCACCCGCCATGTCATCATCCTCATGACTGATGGATTG CACAACATGGGCGGGGACCCAATTACTGTCATTGATGAGATCCGGGACTTGCTATACATT GGCAAGGATCGCAAAAACCCAAGGGAGGATTATCTGGATGTCTATGTGTTTGGGGTCGGG CCTTTGGTGAACCAAGTGAACATCAATGCTTTGGCTTCCAAGAAAGACAATGAGCAACAT GTGTTCAAAGTCAAGGATATGGAAAACCTGGAAGATGTTTTCTACCAAATGATCGATGAA AGCCAGTCTCTGAGTCTCTGTGGCATGGTTTGGGAACACAGGAAGGGTACCGATTACCAC AAGCAACCATGGCAGGCCAAGATCTCAGTCATTCGCCCTTCAAAGGGACACGAGAGCTGT ATGGGGGCTGTGGTGTCTGAGTACTTTGTGCTGACAGCAGCACATTGTTTCACTGTGGAT GACAAGGAACACTCAATCAAGGTCAGCGTAGGAGGGGAGAAGCGGGACCTGGAGATAGAA GTAGTCCTATTTCACCCCAACTACAACATTAATGGGAAAAAAGAAGCAGGAATTCCTGAA TTTTATGACTATGACGTTGCCCTGATCAAGCTCAAGAATAAGCTGAAATATGGCCAGACT ATCAGGCCCATTTGTCTCCCCTGCACCGAGGGAACAACTCGAGCTTTGAGGCTTCCTCCA ACTACCACTTGCCAGCAACAAAAGGAAGAGCTGCTCCCTGCACAGGATATCAAAGCTCTG TTTGTGTCTGAGGAGGAGAAAAAGCTGACTCGGAAGGAGGTCTACATCAAGAATGGGGAT AAGAAAGGCAGCTGTGAGAGAGATGCTCAATATGCCCCAGGCTATGACAAAGTCAAGGAC ATCTCAGAGGTGGTCACCCCTCGGTTCCTTTGTACTGGAGGAGTGAGTCCCTATGCTGAC CCCAATACTTGCAGAGGTGATTCTGGCGGCCCCTTGATAGTTCACAAGAGAAGTCGTTTC ATTCAAGTGAGTCCTCCCTTTCCTATCTGGGGAGATGCCAAGTGGTCAGCATGGGCCCCA AAGCAGGAAAGCTCAATGCATGTGGCTAGTAATTCGAGGTAG >chr6_cox_hap1_117|geneid_v1.2_predicted_protein_117|1234_AA MRKELPAVTKEKTEDTMGPLMVLFCLLFLYPAVRCPAPVSFENGIYTPRLGSYPVGGNVS FECEDGFILRGSPVRQCRPNGMWDGETAVCDNGAGHCPNPGISLGAVRTGFRFGHGDKVR YRCSSNLVLTGSSERECQGNGVWSGTEPICRQPYSYDFPEDVAPALGTSFSHMLGATNPT QKTKESLGRKIQIQRSGHLNLYLLLDCSQSVSENDFLIFKESASLMVDRIFSFEINVSVA IITFASEPKVLMSVLNDNSRDMTEVISSLENANYKDHENGTGTNTYAALNSVYLMMNNQM RLLGMETMAWQEIRHAIILLTDGKSNMGGSPKTAVDHIREILNINQKRNDYLDIYAIGVG KLDVDWRELNELGSKKDGERHAFILQDTKALHQVFEHMLDVSKLTDTICGVGNMSANASD QERTPWHVTIKPKSQETCRGALISDQWVLTAAHCFRDGNDHSLWRVNVGDPKSQWGKEFL IEKAVISPGFDVFAKKNQGILEFYGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRR PQGSTCRDHENELLNKQSVPAHFVALNGSKLNINLKMGVEWTSCAEVVSQEKTMFPNLTD VREVVTDQFLCSGTQEDESPCKAIHCPRPHDFENGEYWPRSPYYNVSDEISFHCYDGYTL RGSANRTCQVNGRWSGQTAICDNGAGYCSNPGIPIGTRKVGSQYRLEDSVTYHCSRGLTL RGSQRRTCQEGGSWSGTEPSCQGEQQKRKIVLDPSGSMNIYLVLDGSDSIGASNFTGAKK CLVNLIEKVASYGVKPRYGLVTYATYPKIWVKVSEADSSNADWVTKQLNEINYEDHKLKS GTNTKKALQAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMGGDPITVIDEIRDLLYI GKDRKNPREDYLDVYVFGVGPLVNQVNINALASKKDNEQHVFKVKDMENLEDVFYQMIDE SQSLSLCGMVWEHRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVD DKEHSIKVSVGGEKRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQT IRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNGD KKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRF IQVSPPFPIWGDAKWSAWAPKQESSMHVASNSR* # Gene 118 (Reverse). 5 exons. 164 aa. Score = 12.82 Terminal 3366341 3366438 2.29 - 2 0 0.00 5.66 9.74 0.00 AA 132:164 chr6_cox_hap1_118 Internal 3367769 3367871 4.44 - 0 1 4.86 4.32 9.84 0.00 AA 98:132 chr6_cox_hap1_118 Internal 3370733 3370878 5.31 - 2 0 3.89 4.82 14.09 0.00 AA 49: 97 chr6_cox_hap1_118 Internal 3370981 3371050 0.04 - 0 1 1.64 3.06 6.93 0.00 AA 26: 49 chr6_cox_hap1_118 First 3372412 3372486 0.74 - 0 0 3.70 -0.38 9.36 0.00 AA 1: 25 chr6_cox_hap1_118 >chr6_cox_hap1_118|geneid_v1.2_predicted_cDNA_118|492_NN ATGTTGGTGATACCCCCCGGACTGAGCGAGGAAGAGGAGGCTCTGCAGAAGAAATTCAAC AAGCTCAAGAAAAAGAAAAAGGCATTGCTGGCTCTGAAGAAGCAAAGTAGCAGCAGCACA ACCAGCCAAGGTGGTGTCAAACGCTCACTATCAGAGCAGCCTGTCATGGACACAGCCACA GCAACAGAGCAGGCAAAGCAGCTGGTGAAGTCAGGAGCCATCAGTGCCATCAAGGCTGAG ACCAAGAACTCAGGCTTCAAGCGTTCTCGAACCCTTGAGGGGAAGTTAAAGCTCAACGGG ACCCAGGTGGAGTCTGTACAGCTCAAAGTCAACATAGCCCGAAAACAGCCCATGCTGGAT GCCGCTACTGGCAAGTCTGTCTGGGGCTCCCTCGCTGTCCAGAACAGCCCTAAGGGTTGC CACCGGGACAAGAGGACCCAGATTGTCTACAGTGATGACGTCTACAAGGAAAACCTTGTG GATGGCTTCTAG >chr6_cox_hap1_118|geneid_v1.2_predicted_protein_118|164_AA MLVIPPGLSEEEEALQKKFNKLKKKKKALLALKKQSSSSTTSQGGVKRSLSEQPVMDTAT ATEQAKQLVKSGAISAIKAETKNSGFKRSRTLEGKLKLNGTQVESVQLKVNIARKQPMLD AATGKSVWGSLAVQNSPKGCHRDKRTQIVYSDDVYKENLVDGF* # Gene 119 (Forward). 21 exons. 926 aa. Score = 65.69 First 3374263 3374377 -1.54 + 0 1 2.20 3.02 0.80 0.00 AA 1: 39 chr6_cox_hap1_119 Internal 3374706 3374780 2.85 + 2 1 5.23 4.19 5.50 0.00 AA 39: 64 chr6_cox_hap1_119 Internal 3375081 3375134 0.35 + 2 1 4.51 1.70 4.06 0.00 AA 64: 82 chr6_cox_hap1_119 Internal 3376025 3376094 0.59 + 2 2 3.12 2.43 5.65 0.00 AA 82:105 chr6_cox_hap1_119 Internal 3376479 3376625 8.02 + 1 2 2.86 3.92 22.39 0.00 AA 105:154 chr6_cox_hap1_119 Internal 3376754 3376838 6.06 + 1 0 4.28 4.60 14.35 0.00 AA 154:182 chr6_cox_hap1_119 Internal 3377025 3377131 1.15 + 0 2 3.61 2.76 5.81 0.00 AA 183:218 chr6_cox_hap1_119 Internal 3377453 3377599 4.37 + 1 2 6.18 2.64 10.20 0.00 AA 218:267 chr6_cox_hap1_119 Internal 3377677 3377773 2.26 + 1 0 3.59 3.89 6.92 0.00 AA 267:299 chr6_cox_hap1_119 Internal 3378272 3378382 1.84 + 0 0 1.44 0.42 14.31 0.00 AA 300:336 chr6_cox_hap1_119 Internal 3379823 3380053 6.99 + 0 0 5.80 3.04 16.72 0.00 AA 337:413 chr6_cox_hap1_119 Internal 3380749 3380886 4.05 + 0 0 0.25 4.41 15.65 0.00 AA 414:459 chr6_cox_hap1_119 Internal 3381044 3381181 1.95 + 0 0 0.66 3.85 10.60 0.00 AA 460:505 chr6_cox_hap1_119 Internal 3381313 3381417 2.69 + 0 0 4.49 3.66 7.01 0.00 AA 506:540 chr6_cox_hap1_119 Internal 3381755 3381902 0.03 + 0 1 2.43 3.71 3.38 0.00 AA 541:590 chr6_cox_hap1_119 Internal 3381996 3382122 4.30 + 2 2 5.13 -1.05 17.13 0.00 AA 590:632 chr6_cox_hap1_119 Internal 3382368 3382578 1.57 + 1 0 3.39 2.79 7.16 0.00 AA 632:702 chr6_cox_hap1_119 Internal 3382726 3382836 3.30 + 0 0 -1.00 2.97 17.80 0.00 AA 703:739 chr6_cox_hap1_119 Internal 3382911 3383129 6.14 + 0 0 6.09 2.80 14.50 0.00 AA 740:812 chr6_cox_hap1_119 Internal 3383320 3383460 5.59 + 0 0 6.29 3.71 11.48 0.00 AA 813:859 chr6_cox_hap1_119 Terminal 3383555 3383755 3.11 + 0 0 4.06 0.00 14.19 0.00 AA 860:926 chr6_cox_hap1_119 >chr6_cox_hap1_119|geneid_v1.2_predicted_cDNA_119|2778_NN ATGGCAGAGGAAGACGGATCCCTGGTCTCTTTTGGCTGTCCTGGGAGCCCCAGTCCCATC CGACCTACAGGCCCAAAGACACCCAACCACAGGCCAGATACTGGGTTACAAAGAGGGGGG ATGGATGAACCCACCATAACAGATCTGAACACACGGGAGGAGGCTGAGGAGGAGATAGAC TTTGAGAAAGATCTTCTTACTATTCCACCTGGTTTCAAGAAAGGCATGGACTTTGCACCA AAAGCTCACACATCTGCAGGAAAAACAGTTGTGGCTGAATATGCCATTGCCCTGGCCCAG AAACACATGACACGCACCATCTACACTTCGCCCATCAAGGCCCTGAGCAACCAGAAGTTC CGGGACTTCCGAAACACATTCGGGGATGTGGGGCTGCTCACCGGGGATGTACAGCTGCAT CCGGAGGCCTCCTGCCTCATCATGACCACAGAGATCCTTCGCTCCATGCTGTACAGTGGC TCAGATGTTATTCGGGACCTGGAGTGGGTCATCTTTGATGAGGTTCACTATATCAACGAT GTCGAGCGTGGGGTCGTGTGGGAGGAGGTGCTTATCATGCTACCTGACCACGTTTCTATC ATCCTTCTGAGTGCCACCGTCCCCAACGCCCTTGAGTTTGCTGACTGGATTGGGCGGCTG AAGCGTCGTCAGATCTATGTGATTAGCACTGTAACCCGCCCCGTGCCCCTGGAGCACTAT CTTTTCACAGGGAACAGCTCCAAGACCCAGGGGGAGCTCTTTTTGTTGCTGGACTCCCGA GGAGCCTTCCATACAAAAGGGTACTATGCAGCTGTGGAGGCCAAGAAGGAGAGAATGAGC AAACACGCCCAGACCTTTGGGGCCAAGCAGCCCACACATCAGGGGGGCCCTGCACAGGTC CTGCACATGTCAGAGCTCCTGAATCGCGGCCTGGGTGTGCACCATAGCGGCATCCTGCCC ATCCTCAAGGAGATCGTGGAGATGCTCTTCAGCCGTGGCCTGGTCAAGGTCTTGTTTGCC ACAGAGACCTTTGCCATGGGAGTAAACATGCCTGCTCGTACAGTAGTGTTTGACTCCATG CGCAAACACGATGGCTCCACCTTCCGGGACCTGCTCCCTGGGGAGTATGTGCAGATGGCA GGCCGGGCAGGGCGGAGGGGCCTGGACCCCACAGGCACCGTTATCCTGCTCTGCAAGGGC CGAGTGCCCGAGATGGCAGACCTGCACCGCATGATGATGGGGAAGCCGTCCCAGCTGCAG TCCCAGTTCCGCCTCACGTACACTATGATCCTCAACTTGCTGCGAGTGGATGCCCTCAGG GTGGAGGACATGATGAAGAGGAGCTTCTCTGAGTTTCCCTCCCGCAAAGACAGCAAGGCC CATGAACAGGCCCTGGCTGAACTGACCAAGAGGCTGGGAGCTTTGGAGGAGCCTGACATG ACTGGCCAACTGGTCGACCTGCCTGAATATTACAGCTGGGGGGAGGAACTGACAGAGACC CAGCACATGATCCAGCGACGCATCATGGAGTCTGTGAACGGGCTGAAGTCTCTCTCAGCA GGAAGGGTGGTGGTTGTGAAGAATCAGGAGCATCACAACGCATTGGGAGTGATCCTACAG GTCTCCTCGAACTCCACCAGCAGAGTATTCACAACCCTGGTCTTGTGTGATAAGCCCTTG TCCCAGGACCCACAGGACAGGGGGCCAGCCACTGCAGAGGTGCCCTATCCAGATGACCTC GTGGGATTCAAGCTGTTCCTGCCTGAAGGGCCTTGTGACCACACCGTGGTCAAGCTCCAG CCAGGAGATATGGCTGCCATCACCACCAAGGTGCTCCGGGTGAATGGGGAGAAGATCTTG GAGGACTTCAGCAAGAGGCAGCAGCCAAAATTCAAGAAGGATCCTCCCCTTGCAGCCGTG ACCACTGCTGTCCAGGAACTGCTGCGTCTGGCTCAGGCCCACCCAGCCGGACCTCCCACC CTCGACCCTGTCAATGACCTGCAGCTCAAAGATATGTCAGTTGTAGAGGGTGGGCTCCGG GCCCGGAAGCTGGAGGAGCTGATCCAGGGGGCTCAGTGTGTACACAGCCCCCGTTTTCCT GCCCAGTACCTGAAGCTGCGGGAGCGAATGCAGATACAGAAGGAGATGGAGCGGCTGCGC TTCCTACTGTCGGATCAGTCATTGCTGCTGCTTCCTGAGTACCATCAGCGAGTAGAGGTG CTCCGAACCCTGGGTTATGTGGACGAGGCGGGCACTGTGAAGCTGGCAGGGCGGGTGGCT TGTGCCATGAGCAGCCATGAGTTGCTCCTCACTGAGCTCATGTTTGACAATGCACTGAGC ACCCTGCGGCCTGAGGAGATTGCTGCCTTGCTCTCTGGCCTGGTCTGCCAGAGCCCTGGG GACGCTGGGGATCAGCTCCCAAACACCCTCAAGCAGGGAATAGAACGTGTCCGGGCTGTG GCCAAGCGGATTGGTGAGGTCCAGGTGGCTTGTGGCCTGAACCAGACGGTGGAGGAATTT GTGGGGGAGCTGAATTTTGGGCTGGTTGAGGTTGTATATGAGTGGGCCCGGGGCATGCCC TTCTCCGAGTTGGCAGGGCTCTCAGGGACCCCTGAGGGCCTGGTGGTCCGCTGCATTCAG CGCCTGGCTGAGATGTGTCGCTCACTGCGGGGGGCAGCCCGCCTGGTAGGAGAGCCTGTG CTGGGTGCCAAGATGGAGACAGCGGCTACCTTGCTACGGCGGGACATCGTATTTGCGGCC AGCCTCTACACCCAGTGA >chr6_cox_hap1_119|geneid_v1.2_predicted_protein_119|926_AA MAEEDGSLVSFGCPGSPSPIRPTGPKTPNHRPDTGLQRGGMDEPTITDLNTREEAEEEID FEKDLLTIPPGFKKGMDFAPKAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKF RDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYIND VERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPLEHY LFTGNSSKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFGAKQPTHQGGPAQV LHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSM RKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRMMMGKPSQLQ SQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALAELTKRLGALEEPDM TGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKSLSAGRVVVVKNQEHHNALGVILQ VSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVPYPDDLVGFKLFLPEGPCDHTVVKLQ PGDMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPLAAVTTAVQELLRLAQAHPAGPPT LDPVNDLQLKDMSVVEGGLRARKLEELIQGAQCVHSPRFPAQYLKLRERMQIQKEMERLR FLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSSHELLLTELMFDNALS TLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQGIERVRAVAKRIGEVQVACGLNQTVEEF VGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPV LGAKMETAATLLRRDIVFAASLYTQ* # Gene 120 (Reverse). 3 exons. 282 aa. Score = 5.76 Terminal 3384612 3384865 -1.35 - 2 0 0.00 3.57 3.77 0.00 AA 198:282 chr6_cox_hap1_120 Internal 3384952 3385187 2.99 - 1 1 4.39 1.19 11.61 0.00 AA 119:198 chr6_cox_hap1_120 First 3385360 3385715 4.12 - 0 2 1.93 1.54 17.60 0.00 AA 1:119 chr6_cox_hap1_120 >chr6_cox_hap1_120|geneid_v1.2_predicted_cDNA_120|846_NN ATGGATCCCAGGGGGACCAAGAGAGGAGCTGAGAAGACAGAGGTAGCTGAGCCTCGGAAC AAACTACCTCGTCCAGCACCTTCTCTGCCCACAGACCCTGCCCTCTACTCTGGGCCCTTT CCTTTCTACCGGCGCCCTTCGGAACTGGGCTGCTTCTCCCTGGATGCTCAACGCCAGTAC CATGGAGATGCCCGAGCCCTGCGCTACTATAGCCCACCCCCCACTAACGGTCCAGGCCCC AACTTTGACCTCAGAGACGGATACCCGGATCGATACCAGCCCCGGGACGAGGAGGTCCAG GAAAGGCTGGACCACCTGCTGTGCTGGCTCCTGGAACACCGAGGCCGGTTGGAGGGGGGT CCAGGCTGGCTGGCAGAGGCCATAGTGACGTGGCGGGGGCACCTGACAAAACTGCTGACG ACACCGTATGAGCGGCAGGAGGGCTGGCAGCTGGCAGCCTCCCGGTTCCAGGGAACACTA TACCTGAGTGAAGTGGAGACACCGAACGCTCGGGCCCAGAGGCTTGCTCGGCCACCGCTC CTCCGGGAGCTTATGTACATGGGATACAAATTTGAGCAGTACATGTGTGCAGACAAACCT GGAAGCTCCCCAGACCCCTCTGGGGAGGTTAACACCAACGTGGCCTTCTGCTCTGTGCTA CGCAGCCGCCTGGGAAGCCACCCTCTGCTCTTCTCAGGGGAGGTAGACTGCACAGACCCC CAAGCCCCATCCACACAGCCCCCAACCTGCTATGTGGAGCTCAAGACCTCCAAGGAGATG CACAGCCCTGGCCAATGGAGGAGTTTCTACAGGTTCAGGATCGGGGTGGGCAGGGCGAGA GCTTAG >chr6_cox_hap1_120|geneid_v1.2_predicted_protein_120|282_AA MDPRGTKRGAEKTEVAEPRNKLPRPAPSLPTDPALYSGPFPFYRRPSELGCFSLDAQRQY HGDARALRYYSPPPTNGPGPNFDLRDGYPDRYQPRDEEVQERLDHLLCWLLEHRGRLEGG PGWLAEAIVTWRGHLTKLLTTPYERQEGWQLAASRFQGTLYLSEVETPNARAQRLARPPL LRELMYMGYKFEQYMCADKPGSSPDPSGEVNTNVAFCSVLRSRLGSHPLLFSGEVDCTDP QAPSTQPPTCYVELKTSKEMHSPGQWRSFYRFRIGVGRARA* # Gene 121 (Forward). 48 exons. 2205 aa. Score = 108.69 First 3386690 3386810 1.13 + 0 1 0.28 2.16 11.66 0.00 AA 1: 41 chr6_cox_hap1_121 Internal 3392815 3393038 0.34 + 2 0 3.25 0.75 8.71 0.00 AA 41:115 chr6_cox_hap1_121 Internal 3393454 3393593 0.79 + 0 2 4.88 1.41 5.04 0.00 AA 116:162 chr6_cox_hap1_121 Internal 3394491 3394588 -0.62 + 1 1 2.06 1.11 6.19 0.00 AA 162:195 chr6_cox_hap1_121 Internal 3394694 3394841 4.02 + 2 2 4.99 2.85 10.80 0.00 AA 195:244 chr6_cox_hap1_121 Internal 3396345 3396543 -1.53 + 1 0 5.71 2.35 -3.42 0.00 AA 244:310 chr6_cox_hap1_121 Internal 3396926 3396959 -1.33 + 0 1 1.42 2.59 3.16 0.00 AA 311:322 chr6_cox_hap1_121 Internal 3397169 3397239 3.92 + 2 0 3.47 4.73 10.01 0.00 AA 322:345 chr6_cox_hap1_121 Internal 3397318 3397406 3.53 + 0 2 3.29 1.21 14.57 0.00 AA 346:375 chr6_cox_hap1_121 Internal 3397625 3397707 2.33 + 1 1 3.39 2.22 9.92 0.00 AA 375:403 chr6_cox_hap1_121 Internal 3397878 3397974 -0.60 + 2 2 -0.41 2.14 8.42 0.00 AA 403:435 chr6_cox_hap1_121 Internal 3398113 3398218 2.49 + 1 0 3.08 3.07 9.50 0.00 AA 435:470 chr6_cox_hap1_121 Internal 3398316 3398448 4.13 + 0 1 3.85 2.75 12.92 0.00 AA 471:515 chr6_cox_hap1_121 Internal 3398865 3398980 0.13 + 2 0 7.28 -2.14 5.10 0.00 AA 515:553 chr6_cox_hap1_121 Internal 3399720 3399905 7.43 + 0 0 3.16 2.32 22.87 0.00 AA 554:615 chr6_cox_hap1_121 Internal 3400059 3400217 3.16 + 0 0 0.89 0.68 18.06 0.00 AA 616:668 chr6_cox_hap1_121 Internal 3400469 3400595 0.05 + 0 1 4.95 0.61 4.28 0.00 AA 669:711 chr6_cox_hap1_121 Internal 3401098 3401295 4.02 + 2 1 0.94 3.88 15.32 0.00 AA 711:777 chr6_cox_hap1_121 Internal 3401387 3401498 1.97 + 2 2 1.81 0.50 13.97 0.00 AA 777:814 chr6_cox_hap1_121 Internal 3401589 3401659 -0.69 + 1 1 4.50 1.48 1.81 0.00 AA 814:838 chr6_cox_hap1_121 Internal 3401918 3402057 4.70 + 2 0 4.31 0.62 16.86 0.00 AA 838:884 chr6_cox_hap1_121 Internal 3402171 3402380 3.70 + 0 0 5.60 2.30 9.89 0.00 AA 885:954 chr6_cox_hap1_121 Internal 3402460 3402676 -1.09 + 0 1 0.68 4.05 2.66 0.00 AA 955:1027 chr6_cox_hap1_121 Internal 3402778 3402867 0.21 + 2 1 3.21 1.48 6.00 0.00 AA 1027:1057 chr6_cox_hap1_121 Internal 3403003 3403219 0.49 + 2 2 2.71 -0.92 11.04 0.00 AA 1057:1129 chr6_cox_hap1_121 Internal 3403628 3403673 0.60 + 1 0 4.42 2.80 3.15 0.00 AA 1129:1144 chr6_cox_hap1_121 Internal 3403880 3403996 2.54 + 0 0 4.44 3.55 6.87 0.00 AA 1145:1183 chr6_cox_hap1_121 Internal 3404102 3404273 4.05 + 0 1 5.36 3.88 8.76 0.00 AA 1184:1241 chr6_cox_hap1_121 Internal 3404501 3404733 1.61 + 2 0 4.67 0.38 8.94 0.00 AA 1241:1318 chr6_cox_hap1_121 Internal 3404816 3404983 5.78 + 0 0 1.91 1.39 21.99 0.00 AA 1319:1374 chr6_cox_hap1_121 Internal 3406486 3406579 1.97 + 0 1 -0.63 2.02 15.36 0.00 AA 1375:1406 chr6_cox_hap1_121 Internal 3406677 3407068 8.60 + 2 0 2.36 0.12 30.28 0.00 AA 1406:1536 chr6_cox_hap1_121 Internal 3407159 3407233 2.58 + 0 0 4.17 5.20 4.88 0.00 AA 1537:1561 chr6_cox_hap1_121 Internal 3408725 3408827 2.73 + 0 1 1.55 3.01 12.49 0.00 AA 1562:1596 chr6_cox_hap1_121 Internal 3409168 3409266 2.35 + 2 1 1.26 1.88 13.66 0.00 AA 1596:1629 chr6_cox_hap1_121 Internal 3409449 3409532 1.36 + 2 1 3.39 0.58 9.95 0.00 AA 1629:1657 chr6_cox_hap1_121 Internal 3409795 3409927 3.04 + 2 2 3.40 1.52 12.72 0.00 AA 1657:1701 chr6_cox_hap1_121 Internal 3410071 3410206 3.26 + 1 0 4.16 0.31 13.93 0.00 AA 1701:1746 chr6_cox_hap1_121 Internal 3412551 3412605 -1.15 + 0 1 3.08 2.44 1.34 0.00 AA 1747:1765 chr6_cox_hap1_121 Internal 3413657 3413746 0.10 + 2 1 2.57 0.49 8.15 0.00 AA 1765:1795 chr6_cox_hap1_121 Internal 3414029 3414183 7.00 + 2 0 3.02 4.92 18.08 0.00 AA 1795:1846 chr6_cox_hap1_121 Internal 3414291 3414392 2.37 + 0 0 4.03 -0.11 12.56 0.00 AA 1847:1880 chr6_cox_hap1_121 Internal 3414481 3414582 1.86 + 0 0 4.45 2.00 7.46 0.00 AA 1881:1914 chr6_cox_hap1_121 Internal 3414684 3414770 1.69 + 0 0 3.31 1.50 9.51 0.00 AA 1915:1943 chr6_cox_hap1_121 Internal 3414904 3415140 2.56 + 0 0 4.63 2.99 7.49 0.00 AA 1944:2022 chr6_cox_hap1_121 Internal 3415341 3415519 4.38 + 0 2 1.37 1.23 19.54 0.00 AA 2023:2082 chr6_cox_hap1_121 Internal 3415603 3415706 -0.66 + 1 1 -1.18 2.37 9.07 0.00 AA 2082:2117 chr6_cox_hap1_121 Terminal 3415804 3416069 7.38 + 2 0 3.94 0.00 25.05 0.00 AA 2117:2205 chr6_cox_hap1_121 >chr6_cox_hap1_121|geneid_v1.2_predicted_cDNA_121|6615_NN ATGCAGCTGTTCCCGCGAGGCCTGTTTGAGGACGCGCTGCCGCCCATCGTGCTGAGGAGC CAGGTGTACAGCCTTGTGCCTGACAGGACCGTGGCCGACCGGCAGCTGGTGAGGGGCGTC GTTTTTCCTTTACTAAGAGAAAATGCCCCCATATTGGCAAACAAAATCTCCCTGCCTGAG AGCGCCCAGAGTATAGCAGAGCATCTTACCCTGATACGCCTCTTTTCACTCTCTTCTCTG TGGAGACAGAAGGAGCTTCAAGAGCAGGGGGAGATCAGAATCGTCCAGCTGGGCTTCGAC TTGGATGCCCATGGAATTATCTTCACTGAGGACTACAGGACCAGAGTCCTCAAGGCCTGT GATGGCCGACCGTATGCTGGGGCAGTGCAGAAATTTCTAGCTTCAGTACTTCCAGCCTGT GGGGACCTTAGTTTCCAGCAGGACCAAATGACACAGACCTTTGGCTTCAGGGACTCAGAA ATCACGCATCTGGTGAATGCTGGAGTCCTCACCGTCCGAGATGCTGGGAGCTGGTGGCTA GCTGTGCCTGGAGCTGGGAGATTCATCAAGTACTTTGTTAAAGGGCGCCAGGCTGTCCTT AGCATGGTCCGGAAGGCAAAGTACCGGGAACTGCTCCTATCAGAGCTCCTGGGCCGGCGG GCGCCTGTCGTGGTGCGGCTTGGCCTCACCTACCATGTGCACGACCTCATTGGGGCCCAG CTAGTGGACTGGTTGCTCTTGTTCTCTCCTTCTGTGGTTCATCTGGGGGTCCCCCTATCG GTGGGGGTGCAGCTCCAGGATGTGCCCCGAGGACAGGTAGTGAAAGGATCAGTGTTCCTG AGAAACCCATCTCGTAATAATGTCCCCTGCTCCCCAAAGGTGGACTTCACCCTTAGCTCA GAAAGAGACTTCGCACTCCTCAGTCTCCAGACGGACCAGCCCATTTACAACCCTGGCCAG CGGGTTCGGTACCGGGTCTTTGCTCTGGATCAGAAGATGCGCCCGAGCACTGACACCATC ACAGTCATGGTGGAGAACTCTCACGGCCTCCGCGTGCGGAAGAAGGAGGTGTACATGCCC TCGTCCATCTTCCAGGATGACTTTGTGATCCCAGACATCTCAGAGCCAGGGACCTGGAAG ATCTCAGCCCGATTCTCAGATGGCCTGGAATCCAACAGCAGCACCCAGTTTGAGGTGAAG AAATATGTCCTTCCCAACTTTGAGGTGAAGATCACCCCTGGAAAGCCCTACATCCTGACG GTGCCAGGCCATCTTGATGAAATGCAGTTAGACATCCAGGCCAGGTACATCTATGGGAAG CCAGTGCAGGGGGTGGCATATGTGCGCTTTGGGCTCCTAGATGAGGATGGTAAGAAGACT TTCTTTCGGGGGCTGGAGAGTCAGACCAAGCTGGTGAATGGACAGAGCCACATTTCCCTC TCAAAGGCAGAGTTCCAGGACGCCCTGGAGAAGCTGAATATGGGCATTACTGACCTCCAG GGGCTGCGCCTCTACGTTGCTGCAGCCATCATTGAGTCTCCAGGTGGGGAGATGGAGGAG GCAGAGCTCACATCCTGGTATTTTGTGTCATCTCCCTTCTCCTTGGATCTTAGCAAGACC AAGCGACACCTTGTGCCTGGGGCCCCCTTCCTGCTGCAGATCCTATCCCGAGGGCAGATC GTGTTCATGAATCGAGAGCCCAAGAGGACCCTGACCTCGGTCTCGGTGTTTGTGGACCAT CACCTGGCACCCTCCTTCTACTTTGTGGCCTTCTACTACCATGGAGACCACCCAGTGGCC AACTCCCTGCGAGTGGATGTCCAGGCTGGGGCCTGCGAGGGCAAGCTGGAGCTCAGCGTG GACGGTGCCAAGCAGTACCGGAACGGGGAGTCCGTGAAGCTCCACTTAGAAACCGACTCC CTAGCCCTGGTGGCGCTGGGAGCCTTGGACACAGCTCTGTATGCTGCAGGCAGCAAGTCC CACAAGCCCCTCAACATGGGCAAGGTCTTTGAAGCTATGAACAGCTATGACCTCGGCTGT GGTCCTGGGGGTGGGGACAGTGCCCTTCAGGTGTTCCAGGCAGCGGGCCTGGCCTTTTCT GATGGAGACCAGTGGACCTTATCCAGAAAGATGGGTCAGTATGCTTCCCCGACAGCCAAG CGCTGCTGCCAGGATGGGGTGACACGTCTGCCCATGATGCGTTCCTGCGAGCAGCGGGCA GCCCGCGTGCAGCAGCCGGACTGCCGGGAGCCCTTCCTGTCCTGCTGCCAATTTGCTGAG AGTCTGCGCAAGAAGAGCAGGGACAAGGGCCAGGCGGGCCTCCAACGAGCCCTGGAGATC CTGCAGGAGGAGGACCTGATTGATGAGGATGACATTCCCGTGCGCAGCTTCTTCCCAGAG AACTGGCTCTGGAGAGTGGAAACAGTGGACCGCTTTCAAATATTGACACTGTGGCTCCCC GACTCTCTGACCACGTGGGAGATCCATGGCCTGAGCCTGTCCAAAACCAAAGGCCTATGT GTGGCCACCCCAGTTCAGCTCCGGGTGTTCCGCGAGTTCCACCTGCACCTCCGCCTGCCC ATGTCTGTCCGCCGCTTTGAGCAGCTGGAGCTGCGGCCTGTCCTCTATAACTACCTGGAT AAAAACCTGACTGTGAGCGTCCACGTGTCCCCAGTGGAGGGGCTGTGCCTGGCTGGGGGC GGAGGGCTGGCCCAGCAGGTGCTGGTGCCTGCGGGCTCTGCCCGGCCTGTTGCCTTCTCT GTGGTGCCCACGGCAGCCACCGCTGTGTCTCTGAAGGTGGTGGCTCGAGGGTCCTTCGAA TTCCCTGTGGGAGATGCGGTGTCCAAGGTTCTGCAGATTGAGGCCAGGGGCCCAACACCC AAACCAATGCCTTGGTCTGTTCCCATCTTCTACAATTCTGATCCAACTCTGTCCCTGGAG TTGAAACTCAAAGTTCTGGGGGAGTCTGTGCTAGCAGGGCAGGCTGTAGTCCTGTGTGAC CTCACAACCATGTTTTCCCTGAGACAGAAGGAAGGGGCCATCCATAGAGAGGAGCTGGTC TATGAACTCAACCCCTTGGACCACCGAGGCCGGACCTTGGAAATACCTGGCAACTCTGAT CCCAATATGATCCCTGATGGGGACTTTAACAGCTACGTCAGGGTTACAGCCTCAGATCCA TTGGACACTTTAGGCTCTGAGGGGGCCTTGTCACCAGGAGGCGTGGCCTCCCTCTTGAGG CTTCCTCGAGGCTGTGGGGAGCAAACCATGATCTACTTGGCTCCGACACTGGCTGCTTCC CGCTACCTGGACAAGACAGAGCAGTGGAGCACACTGCCTCCCGAGACCAAGGACCACGCC GTGGATCTGATCCAGAAAGGTTCTGGGCTCACAGCCTTTGTGTTGAAGGTCCTGAGTTTG GCCCAGGAGCAGGGGGGTTTGGTGGGCAATGATGAGACTGTGGCACTCACAGCCTTTGTG ACCATCGCCCTTCATCATGGGCTGGCCGTCTTCCAGGATGAGGGTGCAGAGCCATTGAAG CAGAGAGTGGAAGCCTCCATCTCAAAGGCAAGCTCATTTTTGGGGGAGAAAGCAAGTGCT GGGCTCCTGGGTGCCCACGCAGCTGCCATCACGGCCTATGCCCTGACACTGACCAAGGCC CCTGCGGACCTGCGGGGTGTTGCCCACAACAACCTCATGGCAATGGCCCAGGAGACTGGA GATAACCTGTACTGGGGCTCAGTCACTGGTTCTCAGAGCAATGCCGTGTCGCCCACCCCG GCTCCTCGCAACCCATCCGACCCCATGCCCCAGGCCCCAGCCCTGTGGATTGAAACCACA GCCTACGCCCTGCTGCACCTCCTGCTTCACGAGGGCAAAGCAGAGATGGCAGACCAGGCT GCGGCCTGGCTCACCCGTCAGGGCAGCTTCCAAGGGGGATTCCGCAGTACCCAAGACACG GTGATTGCCCTGGATGCCCTGTCTGCCTACTGGATTGCCTCCCACACCACTGAGGAGAGG GGTCTCAATGTGACTCTCAGCTCCACAGGCCGGAATGGGTTCAAGTCCCACGCGCTGCAG CTGAACAACCGCCAGATTCGCGGCCTGGAGGAGGAGCTGCAGGTCCTTCGTACCTACAAT GTCCTGGACATGAAGAACACGACCTGCCAGGACCTACAGATAGAAGTGACAGTCAAAGGC CACGTCGAGTACACGATGGAAGCAAACGAGGACTATGAGGACTATGAGTACGATGAGCTT CCAGCCAAGGATGACCCAGATGCCCCTCTGCAGCCCGTGACACCCCTGCAGCTGTTTGAG GGTCGGAGGAACCGCCGCAGGAGGGAGGCGCCCAAGGTGGTGGAGGAGCAGGAGTCCAGG GTGCACTACACCGTGTGCATCTGGTGGGCGCCGGGAGCTGCCCTGGGCCAGGGGAGGGAG GGCAGGACCCAGGCTGGGGCTGGGCTTCTGGAGCCCGCGCAGGCAGAACCTGGACGACAG CTCACACGTCTCCACAGGCGGAACGGCAAGGTGGGGCTGTCTGGCATGGCCATCGCGGAC GTCACCCTCCTGAGTGGATTCCACGCCCTGCGTGCTGACCTGGAGAAGCTGACCTCCCTC TCTGACCGTTACGTGAGTCACTTTGAGACCGAGGGGCCCCACGTCCTGCTGTATTTTGAC TCGGTCCCCACCTCCCGGGAGTGCGTGGGCTTTGAGGCTGTGCAGGAAGTGCCGGTGGGG CTGGTGCAGCCGGCCAGCGCAACCCTGTACGACTACTACAACCCCGGGAAGTGCCCTCGC CAGCGTCGCGCCCTGGAGCGGGGTCTGCAGGACGAGGATGGCTACAGGATGAAGTTTGCC TGCTACTACCCCCGTGTGGAGTACGGCTTCCAGGTTAAGGTTCTCCGAGAAGACAGCAGA GCTGCTTTCCGCCTCTTTGAGACCAAGATCACCCAAGTCCTGCACTTCACCAAGGATGTC AAGGCCGCTGCTAATCAGATGCGCAACTTCCTGGTTCGAGCCTCCTGCCGCCTTCGCTTG GAACCTGGGAAAGAATATTTGATCATGGGTCTGGATGGGGCCACCTATGACCTCGAGGGA CACCCCCAGTACCTGCTGGACTCGAATAGCTGGATCGAGGAGATGCCCTCTGAACGCCTG TGCCGGAGCACCCGCCAGCGGGCAGCCTGTGCCCAGCTCAACGACTTCCTCCAGGAGTAT GGCACTCAGGGGTGCCAGCTCAAGGTGGGCTGTTTTCCTTTCAACCAAAGAAAGGTGCTC CTGGTGGCTAAAGATGTGGTGGTGCTGAACTCCAAGAGGACCATTGAGGAAGCCATGGTC AAAAAGTGGGCAGACTTTGCTGGCAGACCTGAGCCACTTACCTACAAGCTGGTGTCTAGG AACTACCCGGACCTGTCCTTGGGAGACTACTCCCTGCTCTGGAAAGCCCACAAGAAGCTC ACCCGCTCAGCCCTGCTGCTGGGCATCCGTGACTCCATGGAGCCAGTGGTGGAGCAGCTG ACCCAGGAGTTCTGTGAGCGCATGAGAGCCCAGCCCGGCACCCCTGTGGCCATTGAGGAG GAATTCTCTCTCCTCACCTGCAGCATCATCTGTTACCTCACCTTCGGAGACAAGATCAAG GACGACAACTTAATGCCTGCCTATTACAAATGTATCCAGGAGGTGTTAAAAACCTGGAGC CACTGGTCCATCCAAATTGTGGACGTGATTCCCTTTCTCAGGTTCTTCCCCAATCCAGGT CTCCGGAGGCTGAAGCAGGCCATAGAGAAGAGGGATCACATCGTGGAGATGCAGCTGAGG CAGCACAAGGCCAGCCGCTCAGCCCGCTCCTTTCACCCTCTGCAGGAGAGCCTCGTGGCA GGCCAGTGGAGGGACATGATGGACTACATGCTCCAAGGGGTGGCGCAGCCGAGCATGGAA GAGGGCTCTGGACAGCTCCTGGAAGGGCACGTGCACATGGCTGCAGTGGACCTCCTGATC GGTGGCACTGAGACCACAGCAAACACCCTCTCCTGGGCCGTGGTTTTTTTGCTTCACCAC CCTGAGATTCAGCAGCGACTGCAGGAGGAGCTAGACCACGAACTGGGCCCTGGTGCCTCC AGCTCCCGGGTCCCCTACAAGGACCGTGCACGGCTGCCCTTGCTCAATGCCACCATCGCC GAGGTGCTGCGCCTGCGGCCCGTTGTGCCCTTAGCCTTGCCCCACCGCACCACACGGCCC AGCAGCATCTCCGGCTACGACATCCCTGAGGGCACAGTCATCATTCCGAACCTCCAAGGC GCCCACCTGGATGAGACGGTCTGGGAGAGGCCACATGAGTTCTGGCCTGATCGCTTCCTG GAGCCAGGCAAGAACTCCAGAGCTCTGGCCTTCGGCTGCGGTGCCCGCGTGTGCCTGGGC GAGCCGCTGGCGCGCCTGGAGCTCTTCGTGGTGCTGACCCGACTGCTGCAGGCCTTCACG CTGCTGCCCTCCGGGGACGCCCTGCCCTCCCTGCAGCCCCTGCCCCACTGCAGTGTCATC CTCAAGATGCAGCCTTTCCAAGTGCGGCTGCAGCCCCGGGGGATGGGGGCCCACAGCCCG GGCCAGAGCCAGTGA >chr6_cox_hap1_121|geneid_v1.2_predicted_protein_121|2205_AA MQLFPRGLFEDALPPIVLRSQVYSLVPDRTVADRQLVRGVVFPLLRENAPILANKISLPE SAQSIAEHLTLIRLFSLSSLWRQKELQEQGEIRIVQLGFDLDAHGIIFTEDYRTRVLKAC DGRPYAGAVQKFLASVLPACGDLSFQQDQMTQTFGFRDSEITHLVNAGVLTVRDAGSWWL AVPGAGRFIKYFVKGRQAVLSMVRKAKYRELLLSELLGRRAPVVVRLGLTYHVHDLIGAQ LVDWLLLFSPSVVHLGVPLSVGVQLQDVPRGQVVKGSVFLRNPSRNNVPCSPKVDFTLSS ERDFALLSLQTDQPIYNPGQRVRYRVFALDQKMRPSTDTITVMVENSHGLRVRKKEVYMP SSIFQDDFVIPDISEPGTWKISARFSDGLESNSSTQFEVKKYVLPNFEVKITPGKPYILT VPGHLDEMQLDIQARYIYGKPVQGVAYVRFGLLDEDGKKTFFRGLESQTKLVNGQSHISL SKAEFQDALEKLNMGITDLQGLRLYVAAAIIESPGGEMEEAELTSWYFVSSPFSLDLSKT KRHLVPGAPFLLQILSRGQIVFMNREPKRTLTSVSVFVDHHLAPSFYFVAFYYHGDHPVA NSLRVDVQAGACEGKLELSVDGAKQYRNGESVKLHLETDSLALVALGALDTALYAAGSKS HKPLNMGKVFEAMNSYDLGCGPGGGDSALQVFQAAGLAFSDGDQWTLSRKMGQYASPTAK RCCQDGVTRLPMMRSCEQRAARVQQPDCREPFLSCCQFAESLRKKSRDKGQAGLQRALEI LQEEDLIDEDDIPVRSFFPENWLWRVETVDRFQILTLWLPDSLTTWEIHGLSLSKTKGLC VATPVQLRVFREFHLHLRLPMSVRRFEQLELRPVLYNYLDKNLTVSVHVSPVEGLCLAGG GGLAQQVLVPAGSARPVAFSVVPTAATAVSLKVVARGSFEFPVGDAVSKVLQIEARGPTP KPMPWSVPIFYNSDPTLSLELKLKVLGESVLAGQAVVLCDLTTMFSLRQKEGAIHREELV YELNPLDHRGRTLEIPGNSDPNMIPDGDFNSYVRVTASDPLDTLGSEGALSPGGVASLLR LPRGCGEQTMIYLAPTLAASRYLDKTEQWSTLPPETKDHAVDLIQKGSGLTAFVLKVLSL AQEQGGLVGNDETVALTAFVTIALHHGLAVFQDEGAEPLKQRVEASISKASSFLGEKASA GLLGAHAAAITAYALTLTKAPADLRGVAHNNLMAMAQETGDNLYWGSVTGSQSNAVSPTP APRNPSDPMPQAPALWIETTAYALLHLLLHEGKAEMADQAAAWLTRQGSFQGGFRSTQDT VIALDALSAYWIASHTTEERGLNVTLSSTGRNGFKSHALQLNNRQIRGLEEELQVLRTYN VLDMKNTTCQDLQIEVTVKGHVEYTMEANEDYEDYEYDELPAKDDPDAPLQPVTPLQLFE GRRNRRRREAPKVVEEQESRVHYTVCIWWAPGAALGQGREGRTQAGAGLLEPAQAEPGRQ LTRLHRRNGKVGLSGMAIADVTLLSGFHALRADLEKLTSLSDRYVSHFETEGPHVLLYFD SVPTSRECVGFEAVQEVPVGLVQPASATLYDYYNPGKCPRQRRALERGLQDEDGYRMKFA CYYPRVEYGFQVKVLREDSRAAFRLFETKITQVLHFTKDVKAAANQMRNFLVRASCRLRL EPGKEYLIMGLDGATYDLEGHPQYLLDSNSWIEEMPSERLCRSTRQRAACAQLNDFLQEY GTQGCQLKVGCFPFNQRKVLLVAKDVVVLNSKRTIEEAMVKKWADFAGRPEPLTYKLVSR NYPDLSLGDYSLLWKAHKKLTRSALLLGIRDSMEPVVEQLTQEFCERMRAQPGTPVAIEE EFSLLTCSIICYLTFGDKIKDDNLMPAYYKCIQEVLKTWSHWSIQIVDVIPFLRFFPNPG LRRLKQAIEKRDHIVEMQLRQHKASRSARSFHPLQESLVAGQWRDMMDYMLQGVAQPSME EGSGQLLEGHVHMAAVDLLIGGTETTANTLSWAVVFLLHHPEIQQRLQEELDHELGPGAS SSRVPYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSISGYDIPEGTVIIPNLQG AHLDETVWERPHEFWPDRFLEPGKNSRALAFGCGARVCLGEPLARLELFVVLTRLLQAFT LLPSGDALPSLQPLPHCSVILKMQPFQVRLQPRGMGAHSPGQSQ* # Gene 122 (Reverse). 49 exons. 4449 aa. Score = 312.95 Terminal 3416631 3416869 1.10 - 2 0 0.00 1.43 13.11 0.00 AA 4370:4449 chr6_cox_hap1_122 Internal 3416947 3417108 7.79 - 2 1 4.56 0.24 24.75 0.00 AA 4316:4370 chr6_cox_hap1_122 Internal 3417201 3417297 1.21 - 0 1 1.76 3.31 7.93 0.00 AA 4284:4316 chr6_cox_hap1_122 Internal 3417390 3417541 5.51 - 2 0 1.09 5.36 16.59 0.00 AA 4233:4283 chr6_cox_hap1_122 Internal 3417634 3417766 -0.05 - 0 1 0.80 5.72 2.61 0.00 AA 4189:4233 chr6_cox_hap1_122 Internal 3417886 3418016 1.10 - 2 0 -0.02 6.39 5.69 0.00 AA 4145:4188 chr6_cox_hap1_122 Internal 3418110 3418253 1.34 - 2 1 2.58 2.21 8.68 0.00 AA 4097:4145 chr6_cox_hap1_122 Internal 3418372 3418491 1.10 - 2 1 1.93 3.45 7.18 0.00 AA 4057:4097 chr6_cox_hap1_122 Internal 3418684 3419064 4.55 - 2 1 2.26 3.21 15.67 0.00 AA 3930:4057 chr6_cox_hap1_122 Internal 3419316 3419651 6.36 - 2 1 4.37 2.78 17.67 0.00 AA 3818:3930 chr6_cox_hap1_122 Internal 3419941 3420261 7.39 - 2 1 1.69 2.19 25.16 0.00 AA 3711:3818 chr6_cox_hap1_122 Internal 3421110 3421391 7.57 - 2 1 3.99 3.78 19.76 0.00 AA 3617:3711 chr6_cox_hap1_122 Internal 3422669 3422947 6.96 - 2 1 4.51 3.16 18.40 0.00 AA 3524:3617 chr6_cox_hap1_122 Internal 3423298 3423585 7.37 - 2 1 4.10 3.31 19.80 0.00 AA 3428:3524 chr6_cox_hap1_122 Internal 3424205 3424570 10.61 - 2 1 3.65 5.20 25.74 0.00 AA 3306:3428 chr6_cox_hap1_122 Internal 3424933 3425256 9.44 - 2 1 3.65 1.56 28.28 0.00 AA 3198:3306 chr6_cox_hap1_122 Internal 3427605 3427928 10.72 - 2 1 5.16 4.71 24.48 0.00 AA 3090:3198 chr6_cox_hap1_122 Internal 3428323 3428646 10.78 - 2 1 4.94 1.55 29.72 0.00 AA 2982:3090 chr6_cox_hap1_122 Internal 3430786 3431109 11.44 - 2 1 4.94 3.93 27.80 0.00 AA 2874:2982 chr6_cox_hap1_122 Internal 3431521 3431838 9.74 - 2 1 3.65 1.38 29.30 0.00 AA 2768:2874 chr6_cox_hap1_122 Internal 3432993 3433325 9.51 - 2 1 4.94 3.65 23.39 0.00 AA 2657:2768 chr6_cox_hap1_122 Internal 3436332 3436655 10.75 - 2 1 3.50 4.10 27.98 0.00 AA 2549:2657 chr6_cox_hap1_122 Internal 3437092 3437418 10.83 - 2 1 4.94 3.02 27.64 0.00 AA 2440:2549 chr6_cox_hap1_122 Internal 3439756 3440052 8.75 - 2 1 3.28 4.50 22.70 0.00 AA 2341:2440 chr6_cox_hap1_122 Internal 3442613 3442936 10.60 - 2 1 3.65 4.86 26.22 0.00 AA 2233:2341 chr6_cox_hap1_122 Internal 3443342 3443659 8.71 - 2 1 4.94 3.12 22.18 0.00 AA 2127:2233 chr6_cox_hap1_122 Internal 3443774 3444088 2.91 - 2 1 3.89 1.56 11.61 0.00 AA 2022:2127 chr6_cox_hap1_122 Internal 3444505 3444813 8.83 - 2 1 3.28 2.73 25.54 0.00 AA 1919:2022 chr6_cox_hap1_122 Internal 3445079 3445366 6.98 - 2 1 2.37 1.41 24.27 0.00 AA 1823:1919 chr6_cox_hap1_122 Internal 3446942 3447235 5.09 - 2 1 2.26 1.31 19.89 0.00 AA 1725:1823 chr6_cox_hap1_122 Internal 3448599 3448904 10.53 - 2 1 3.86 1.56 30.68 0.00 AA 1623:1725 chr6_cox_hap1_122 Internal 3453984 3454316 12.29 - 2 1 4.94 4.37 29.26 0.00 AA 1512:1623 chr6_cox_hap1_122 Internal 3456318 3456623 6.32 - 2 1 2.85 2.80 19.82 0.00 AA 1410:1512 chr6_cox_hap1_122 Internal 3456986 3457276 3.60 - 2 1 3.50 2.67 12.26 0.00 AA 1313:1410 chr6_cox_hap1_122 Internal 3459363 3459659 11.73 - 2 1 2.16 1.97 35.64 0.00 AA 1214:1313 chr6_cox_hap1_122 Internal 3460700 3461068 1.97 - 2 1 0.86 4.06 10.06 0.00 AA 1091:1214 chr6_cox_hap1_122 Internal 3462201 3462491 7.31 - 2 1 0.38 0.47 29.50 0.00 AA 994:1091 chr6_cox_hap1_122 Internal 3463732 3463995 5.50 - 2 1 3.08 -0.05 21.69 0.00 AA 906:994 chr6_cox_hap1_122 Internal 3464170 3464326 -1.12 - 0 1 0.17 2.95 5.00 0.00 AA 854:906 chr6_cox_hap1_122 Internal 3470022 3470137 1.40 - 2 0 3.34 1.56 8.65 0.00 AA 815:853 chr6_cox_hap1_122 Internal 3470557 3472251 32.21 - 2 1 3.89 3.74 81.59 0.00 AA 250:815 chr6_cox_hap1_122 Internal 3491426 3491510 1.15 - 0 1 0.49 2.82 10.43 0.00 AA 222:250 chr6_cox_hap1_122 Internal 3491650 3491761 0.17 - 1 0 2.74 2.34 5.29 0.00 AA 184:221 chr6_cox_hap1_122 Internal 3493721 3493812 1.89 - 0 2 3.65 4.28 5.32 0.00 AA 154:184 chr6_cox_hap1_122 Internal 3493902 3494087 6.73 - 0 0 2.17 0.70 25.03 0.00 AA 92:153 chr6_cox_hap1_122 Internal 3496209 3496294 1.18 - 2 0 3.85 4.69 2.64 0.00 AA 63: 91 chr6_cox_hap1_122 Internal 3502047 3502086 1.89 - 0 1 3.89 5.29 3.46 0.00 AA 50: 63 chr6_cox_hap1_122 Internal 3502615 3502670 -0.56 - 2 0 0.46 1.93 7.51 0.00 AA 31: 49 chr6_cox_hap1_122 First 3503061 3503151 3.78 - 0 1 0.71 5.27 12.98 0.00 AA 1: 31 chr6_cox_hap1_122 >chr6_cox_hap1_122|geneid_v1.2_predicted_cDNA_122|13347_NN ATGGCGGAGCTGATGCTGCTCAGCGAGATTGCTGACCCGACGCGTTTCTTCACCGACAAC CTGCTTAGCCCGGAGGACTGGGGTCTGCAGAATGAAGTGGCCGAGGAGCAGACGCAGCTC TTCCGTTGCCCGGAGCAGGATGTCCCGCTCCGAGTCATCGCGTCTCTCCACAGAGCCATC CAGCGAGATGTCCAGACCAAGATAGAACCTGTCTCTCCATGTTCTTCCGTCAACTCTGAG GCCTCCCTGCTCTCAGCCGACTCCTCCAGCCAGGCAAAGCTGCTGAAGCGGCAGCAGCGA ATGATCAAGAACCGGGAGTCAGCCTGCCAGTCCCGGAGAAAGAAGAAAGAGTATCTGCAG GGACTGGAGGCTCGGCTGCAAGCAGTACTGGCTGACAACCAGCAGCTCCGCCGAGAGAAT GCTGCCCTCCGGCGGCGGCTGGAGGCCCTGCTGGCTGAAAACAGCGAGCTCAAGTTAGGG TCTGGAAACAGGAAGGTGGTCTGCATCATGGTCTTCCTTCTCTTCATTGCCTTCAACTTT GGACCTGTCAGGGATTCTGTGGGCCAGCTGCAACTATATCGCCACCCAGACCGTTCGCAG CCAGCATTCTTGGATGCAATTGACCGACGGGAAGACACATTTTATGTTGTCTCTTTCCGA AGGGACCACCTGCTGCTCCCAGCCATCAGCCACAACAAGACCTCCCGGCCCAAGATGTCC CTGGTGATGCCTGCCATGGCCCCCAATGCCTCGGGGTCCTGCCCAGATGACTGCAATGAT CAGGGTCGCTGTGTCCGTGGTCGTTGCGTGTGCTTTCCCGGCTACACTGGCCCCAGCTGT GGCTGGCCATCCTGTCCCGGGGACTGCCAAGGCCGTGGGCGCTGCGTGCAGGGCGTGTGT GTGTGCCGGGCAGGCTTCTCAGGCCCCGACTGCAGCCAGCGCTCCTGCCCTCGAGGTTGC AGCCAGAGGGGACGCTGTGAGGGTGGGCGCTGCGTGTGTGACCCAGGCTACACTGGTGAC GACTGTGGCATGAGGAGCTGCCCTCGCGGTTGCAGTCAGAGGGGGCGCTGTGAGAATGGG CGCTGCGTGTGTAACCCCGGCTACGCTGGCGAGGACTGTGGGGTGAGGAGCTGCCCTCGG GGCTGCAGCCAGCGGGGACGCTGCAAGGACGGGCGCTGCGTGTGTGACCCCGGCTACACT GGCGAGGACTGTGGTACGCGGAGCTGCCCCTGGGACTGTGGCGAGGGCGGGCGCTGCGTG GACGGCCGCTGCGTGTGCTGGCCCGGGTACACAGGCGAGGACTGCAGCACGCGGACATGT CCGAGGGACTGCCGGGGCCGCGGGCGCTGCGAGGACGGCGAATGCATTTGCGACACGGGC TACAGCGGGGACGACTGCGGCGTGCGCAGCTGCCCTGGCGACTGCAACCAAAGGGGCCGC TGCGAGGACGGCCGCTGCGTGTGCTGGCCGGGGTACACTGGAACCGATTGCGGCTCGCGC GCCTGCCCACGCGACTGTAGAGGTCGCGGGCGCTGCGAGAACGGCGTGTGTGTTTGCAAT GCGGGCTACAGCGGCGAGGACTGCGGTGTGCGCAGCTGTCCTGGGGACTGTCGTGGCCGG GGCCGCTGTGAGAGTGGCCGCTGCATGTGTTGGCCGGGGTACACAGGCCGGGACTGCGGC ACGCGCGCCTGTCCTGGCGACTGTCGCGGGCGCGGGCGCTGCGTGGATGGCCGCTGCGTG TGCAACCCGGGCTTCACCGGTGAGGACTGTGGGAGCCGTCGCTGTCCCGGGGACTGCCGT GGGCACGGCCTTTGCGAGGATGGCGTGTGCGTGTGTGACGCAGGCTACTCAGGGGAAGAC TGCAGCACGCGCAGCTGCCCCGGGGGCTGCCGAGGCCGCGGCCAGTGCCTAGATGGGCGG TGTGTGTGCGAGGACGGCTACTCTGGCGAGGATTGCGGTGTGAGGCAGTGCCCGAATGAC TGCAGCCAGCACGGCGTGTGCCAGGACGGTGTGTGCATCTGTTGGGAAGGCTACGTGAGT GAGGACTGCAGCATCCGCACCTGCCCCTCCAACTGCCACGGGAGGGGCCGCTGTGAGGAA GGGCGCTGCCTGTGCGACCCAGGCTACACCGGCCCTACCTGTGCCACCCGCATGTGCCCG GCTGACTGCCGGGGACGTGGGCGGTGTGTGCAAGGAGTGTGCCTGTGCCACGTGGGCTAT GGCGGTGAGGACTGCGGGCAGGAAGAGCCTCCAGCCAGCGCCTGCCCTGGAGGCTGCGGG CCCCGGGAACTGTGCCGGGCAGGCCAGTGTGTGTGTGTAGAGGGCTTCCGAGGCCCTGAC TGTGCCATCCAGACATGCCCAGGGGACTGCCGTGGCCGAGGAGAGTGTCACGATGGCAGC TGTGTCTGCAAAGATGGGTATGCTGGCGAAGACTGCGGAGAAGAGGTGCCAACCATTGAG GGCATGAGGATGCATCTCTTGGAGGAGACAACAGTTCGGACAGAGTGGACCCCGGCTCCT GGCCCCGTGGATGCCTATGAAATTCAGTTCATCCCCACGACAGAGGGGGCGAGCCCCCCA TTCACAGCACGGGTTCCAAGCTCTGCCTCAGCCTATGACCAGAGAGGACTGGCCCCTGGA CAGGAGTACCAGGTCACTGTCCGAGCCCTTCGAGGGACCAGCTGGGGCCTTCCTGCCTCC AAGACCATCACCACCATGATCGATGGGCCCCAGGACCTCCGAGTGGTGGCTGTGACACCG ACAACACTGGAGCTTGGCTGGCTGCGTCCCCAGGCTGAGGTGGACCGATTTGTGGTGTCC TACGTCAGTGCCGGCAACCAGAGGGTGAGGCTGGAAGTGCCCCCTGAAGCAGACGGGACG CTGCTGACTGACCTGATGCCAGGCGTAGAATATGTGGTGACTGTCACAGCGGAGCGGGGC CGGGCAGTCAGCTACCCAGCTTCTGTCAGGGCCAACACAGGCGTCGACCGGGTGGCTGCG TCCCGCCACCCCAAGCCAGAGGTGCTGGGCAGTTCCGCCGATGGCGCGCTTCTCGTGTCT CTCGACGGGCTCCGCGGCCAGTTCGAGCGCGTGGTGCTGCGCTGGCGGCCTCAGCCGCCT GCAGAGGGCCCCGGCGGTGAGCTGACTGTGCCGGGCACCACGCGCACCGTCAGCCTGCCC GACCTCAGGCCCGGCACCACCTACCACGTGGAGGTCCACGGGGTGCGGGCGGGGCAGACC TCCAAGTCCTACGCCTTCATCACCACCACAGGGTCCTCACCCTTGGGCCTCTTGGGGACT ACCGATGAGCCTCCTCCCTCAGGCCCCTCGACGACGCAAGGGGCCCAGGCTCCTCTCCTG CAGCAGCGCCCCCAGGAGCTGGGAGAGTTGAGGGTGCTGGGCAGAGATGAGACAGGGCGC CTCCGTGTGGTCTGGACCGCCCAGCCTGACACCTTTGCCTACTTCCAACTGCGCATGCGG GTGCCCGAGGGGCCGGGGGCACATGAGGAAGTGCTGCCAGGGGACGTCCGCCAGGCTCTG GTGCCTCCACCCCCTCCTGGAACCCCGTATGAGCTGTCACTTCATGGGGTCCCTCCTGGG GGCAAGCCCTCTGACCCCATCATCTACCAAGGCATTATGGACAAGGATGAGGAGAAGCCT GGGAAGTCCTCAGGCCCACCACGCCTGGGTGAGCTGACGGTGACAGACAGGACCTCCGAC TCCTTGCTCCTGCGCTGGACGGTCCCCGAGGGCGAGTTTGACTCCTTCGTGATCCAGTAC AAAGACAGGGACGGGCAGCCCCAGGTGGTGCCCGTGGAAGGACCCCAGCGCTCGGCCGTC ATCACCTCCCTGGATCCTGGCCGCAAGTACAAATTTGTCCTGTATGGGTTTGTTGGCAAG AAGAGGCATGGTCCGCTGGTGGCTGAAGCCAAGATCTTGCCTCAGAGTGACCCAAGTCCA GGGACTCCACCCCACCTGGGAAACCTGTGGGTGACAGACCCTACCCCAGATTCACTGCAC CTCTCCTGGACTGTCCCTGAGGGCCAGTTTGACACCTTCATGGTCCAGTACAGGGACAGG GATGGACGGCCCCAGGTGGTACCTGTGGAAGGGCCCGAGCGTTCATTTGTTGTCTCCTCA CTGGACCCTGACCACAAGTACAGATTCACTCTGTTTGGAATTGCGAACAAGAAGCGGTAT GGCCCCCTCACGGCCGATGGCACCACTGCTCCAGAGAGGAAAGAGGAGCCCCCCCGCCCT GAGTTCCTGGAGCAGCCCCTCCTGGGGGAACTGACAGTGACCGGCGTGACCCCAGACTCC TTGCGTCTCTCATGGACAGTGGCCCAGGGCCCCTTCGACTCATTCATGGTCCAGTACAAG GATGCACAGGGGCAGCCCCAGGCAGTGCCTGTTGCGGGGGATGAGAATGAGGTTACTGTC CCCGGCCTGGATCCCGACCGGAAGTATAAGATGAACCTCTACGGGCTTCGTGGCAGGCAG CGTGTGGGGCCCGAGTCTGTGGTGGCCAAGACTGCTCCTCAGGAGGATGTGGACGAGACC CCCAGCCCCACAGAACTGGGCACGGAGGCCCCGGAGTCCCCCGAGGAGCCGCTCCTGGGG GAGCTGACAGTGACAGGATCCTCCCCTGATTCGCTGAGCCTCTTCTGGACCGTCCCCCAG GGCAGCTTCGACTCTTTCACCGTGCAGTACAAGGACAGGGATGGGCGGCCCCGGGCGGTG CGTGTTGGGGGCAAGGAGAGTGAGGTCACCGTGGGAGGCCTAGAGCCCGGGCACAAGTAC AAGATGCACCTGTACGGCCTCCACGAGGGGCAGCGCGTGGGCCCGGTGTCCGCCGTGGGC GTGACAGCCCCACAACAAGAAGAGACCCCTCCAGCCACTGAGTCCCCGCTGGAGCCACGC CTAGGAGAGCTGACAGTGACAGATGTGACCCCCAACTCTGTGGGCCTCTCCTGGACAGTC CCCGAGGGCCAGTTTGACTCCTTCATAGTCCAGTACAAGGACAAGGACGGGCAGCCCCAG GTGGTGCCGGTGGCGGCAGACCAGCGAGAGGTCACAGTCTACAACCTGGAGCCTGAGAGA AAATATAAGATGAACATGTATGGACTACATGATGGGCAACGCATGGGCCCCCTGTCTGTG GTCATCGTGACGGCCCCAGCCACAGAGGCCTCCAAGCCTCCCCTGGAGCCACGCCTAGGG GAGCTGACAGTGACGGATATAACCCCTGACTCTGTGGGCCTCTCATGGACAGTCCCTGAG GGTGAATTCGACTCCTTTGTGGTTCAGTACAAGGACAGGGACGGGCAGCCCCAGGTGGTG CCCGTGGCTGCAGATCAGCGGGAGGTCACTATCCCTGACCTGGAACCCTCCCGCAAGTAC AAGTTCCTGCTCTTTGGGATCCAGGATGGGAAACGACGCAGCCCAGTCTCTGTGGAGGCA AAGACGGTTGCCCGAGGTGACGCCAGCCCAGGGGCCCCACCCCGCCTTGGGGAGCTGTGG GTGACAGACCCCACCCCAGACTCACTGCGCCTCTCCTGGACGGTTCCTGAGGGCCAGTTC GACTCTTTTGTGGTCCAGTTCAAGGACAAAGACGGGCCCCAGGTGGTGCCCGTGGAGGGC CATGAGCGCTCTGTCACTGTCACCCCTCTGGATGCCGGCCGCAAGTACAGATTCCTCCTC TATGGCCTCCTGGGCAAGAAGCGCCATGGCCCTCTCACTGCCGACGGCACCACGGAAGCC CGGAGTGCTATGGATGATACTGGAACAAAGCGTCCCCCAAAACCCCGTCTGGGGGAGGAG CTGCAGGTGACCACCGTGACCCAGAACTCCGTGGGCCTCTCCTGGACAGTCCCTGAGGGC CAGTTTGACTCCTTTGTGGTCCAGTACAAAGACAGGGACGGGCAGCCCCAGGTGGTGCCC GTGGAGGGCAGCCTCAGGGAGGTCAGCGTGCCGGGCCTGGACCCTGCCCACAGGTACAAG CTGCTGCTCTACGGGCTGCACCACGGCAAGCGTGTGGGCCCCATCTCGGCCGTCGCCATT ACTGCCGGCAGGGAAGAAACGGAAACTGAGACCACGGCCCCGACCCCTCCAGCGCCTGAG CCCCACCTCGGGGAGTTGACAGTGGAGGAGGCCACGTCACACACCCTGCATCTCTCCTGG ATGGTGACTGAGGGAGAATTTGACTCCTTCGAAATCCAGTACACAGATAGAGACGGGCAA CTCCAAATGGTCCGCATAGGAGGTGACCGGAATGACATCACCCTCTCTGGCCTGGAATCC GACCACAGATACCTGGTGACCCTGTATGGTTTCAGTGATGGGAAGCATGTAGGTCCTGTC CATGTCGAGGCCCTGACAGTCCCGGAGGAGGAGAAGCCTTCAGAACCTCCCACCGCAACC CCCGAGCCCCCCATCAAGCCTCGCCTGGGGGAGCTGACCGTGACAGATGCCACCCCTGAC TCCCTCAGCCTGTCCTGGACAGTTCCCGAGGGACAGTTTGACCACTTCCTGGTCCAGTAC AGGAATGGAGATGGGCAGCCCAAGGCAGTGAGGGTGCCAGGGCACGAGGAAGGGGTCACC ATCTCGGGCCTGGAGCCAGACCATAAATACAAGATGAACCTGTACGGCTTCCACGGTGGC CAGCGCATGGGCCCTGTGTCTGTCGTCGGGGTGACAGCTGCAGAGGAAGAGACCCCCAGC CCCACAGAACCCAGCATGGAGGCCCCGGAGCCCGCTGAGGAGCCACTCCTGGGGGAGCTA ACAGTGACAGGATCCTCCCCTGACTCGCTGAGCCTCTCCTGGACCGTCCCCCAGGGCCGC TTCGACTCCTTCACCGTGCAGTACAAGGACAGGGACGGGCGGCCCCAGGTGGTGCGTGTT GGGGGCGAGGAGAGTGAAGTCACCGTGGGGGGCCTGGAGCCTGGGCGCAAGTACAAGATG CACCTGTACGGCCTCCACGAGGGGCGGCGCGTGGGCCCAGTGTCTGCTGTGGGCGTCACG GCCCCCGAAGAGGAGTCCCCTGATGCTCCTCTTGCAAAGCTGCGCCTAGGGCAGATGACA GTGAGAGACATCACCTCCGACTCCCTCAGCCTCTCCTGGACAGTCCCCGAGGGCCAGTTT GACCATTTCTTGGTCCAGTTTAAGAATGGGGACGGGCAGCCCAAGGCGGTGCGGGTGCCG GGACACGAGGATGGGGTCACCATCTCGGGCCTGGAGCCAGACCACAAGTACAAGATGAAC CTGTACGGCTTCCACGGTGGCCAGCGCGTGGGCCCCGTGTCTGCTGTTGGTTTAACTGCC CCAGGAAAGGATGAAGAAATGGCCCCAGCCTCGACAGAACCTCCCACCCCTGAACCCCCC ATCAAGCCTCGCCTGGAGGAGCTGACCGTGACAGATGCGACCCCTGACTCCCTCAGCCTG TCCTGGACGGTTCCCGAGGGACAGTTTGACCACTTCCTGGTCCAGTACAAGAATGGGGAT GGGCAGCCCAAGGCAACACGGGTGCCAGGACATGAGGACAGGGTCACCATCTCCGGCCTG GAGCCAGACAACAAGTACAAGATGAACCTGTACGGCTTCCACGGTGGCCAGCGTGTGGGC CCCGTGTCTGCCATCGGGGTGACAGCTGCAGAGGAAGAGACCCCCAGCCCCACAGAACCC AGCATGGAGGCCCCGGAGCCCCCTGAGGAGCCGCTCCTGGGGGAGCTAACAGTGACAGGA TCCTCCCCTGACTCGCTGAGCCTCTCCTGGACCGTCCCCCAGGGCCGCTTCGACTCCTTC ACCGTGCAGTACAAGGACAGGGACGGGCGGCCCCAGGTGGTGCGTGTTGGGGGCGAGGAG AGCGAGGTCACCGTGGGGGGCCTGGAGCCTGGGCGCAAATACAAGATGCACCTGTACGGC CTCCACGAGGGGCGGCGTGTGGGCCCGGTGTCCACCGTGGGCGTGACTGCCCCACAAGAG GATGTGGACGAGACCCCCAGCCCTACAGAACCAGGCACAGAGGCCCCAGAGCCCCCCGAG GAGCCTCTCCTGGGGGAGCTGACAGTGACAGGATCCTCCCCTGACTCGCTGAGCCTTTCC TGGACCGTCCCCCAGGGCCGCTTTGACTCCTTCACCGTGCAGTACAAGGACAGGGACGGG CGGCCCCAGGCGGTGCGTGTTGGGGGCCAGGAGAGCAAGGTCACTGTGAGGGGCCTGGAG CCTGGGCGCAAGTACAAGATGCACCTGTACGGCCTCCACGAGGGGCGGCGCCTAGGCCCG GTGTCTGCCGTGGGCGTCACAGAGGATGAAGCCGAGACCACCCAAGCAGTGCCTACCATG ACCCCTGAGCCCCCCATCAAGCCTCGCCTGGGGGAGCTGACCATGACAGATGCCACCCCT GACTCCCTCAGCCTGTCCTGGACGGTTCCCGAGGGCCAGTTTGACCACTTCCTGGTCCAG TACAGGAATGGGGATGGGCAGCCCAAGGCGGTGCGGGTGCCGGGGCACGAGGACGGGGTC ACCATCTCAGGCCTGGAGCCAGACCATAAATACAAGATGAACCTGTACGGCTTCCACGGT GGCCAGCGCGTGGGCCCCATCTCTGTCATTGGGGTGACGGCTGCAGAGGAAGAGACCCCC AGCCCCACGGAACTCAGCACTGAGGCCCCGGAGCCCCCTGAGGAGCCGCTCCTGGGGGAG CTGACAGTGACAGGATCCTCCCCTGACTCGCTGAGCCTCTCCTGGACCATCCCCCAGGGC CACTTCGACTCCTTCACCGTGCAGTACAAGGACAGGGACGGGCGGCCCCAGGTGATGCGT GTCAGGGGCGAGGAGAGCGAGGTCACCGTGGGGGGCCTGGAGCCCGGGCGCAAATACAAG ATGCACCTGTACGGCCTCCACGAGGGGCGGCGTGTGGGCCCGGTGTCCACCGTGGGTGTG ACAGCTCCAGAGGATGAAGCAGAGACCACCCAAGCAGTGCCCACCACAACCCCTGAGCCC CCCAACAAGCCTCGCCTCGGGGAGCTGACCGTGACAGATGCCACCCCTGACTCCCTCAGC CTGTCCTGGATGGTCCCCGAGGGCCAGTTTGACCACTTCCTGGTCCAGTACAGGAATGGG GATGGGCAGCCCAAGGTGGTGCGGGTGCCGGGGCACGAGGACGGGGTCACCATCTCAGGC CTGGAGCCAGACCACAAGTACAAGATGAACCTGTACGGCTTCCACGGTGGCCAGCGCGTG GGCCCCATCTCTGTCATTGGGGTGACAGCTGCAGAGGAAGAAACTCCCGCCCCCACAGAA CCCAGCACGGAGGCCCCGGAGCCCCCTGAGGAGCCGCTCCTGGGGGAGCTGACAGTGACA GGATCCTCCCCTGACTCGCTGAGCCTCTCCTGGACCATCCCCCAGGGCCGCTTCGACTCC TTCACTGTGCAGTACAAGGACAGGGACGGGCGGCCCCAGGTGGTGCGTGTCAGGGGCGAG GAGAGCGAGGTCACCGTGGGGGGCCTGGAGCCCGGGTGCAAATACAAGATGCACCTGTAC GGCCTCCACGAGGGGCAGCGCGTGGGCCCAGTGTCCGCTGTGGGTGTGACAGCTCCAAAG GATGAAGCCGAGACCACCCAAGCAGTGCCTACCATGACCCCTGAGCCCCCCATCAAGCCT CGCCTGGGGGAGCTGACCGTGACAGATGCCACCCCCGACTCCCTCAGCCTGTCCTGGATG GTTCCCGAGGGCCAGTTTGACCACTTCCTGGTCCAGTACAGGAATGGGGATGGGCAGCCC AAGGCGGTGCGGGTGCCGGGGCACGAGGACGGGGTCACCATCTCAGGCCTGGAGCCAGAC CATAAATACAAGATGAACCTGTACGGCTTCCACGGTGGCCAGCGCGTAGGCCCTGTGTCT GCCATTGGGGTGACGGGACCCAAGGACATCCCCCTCACTCTCTCTCCCTCCTTCTCCACT GCAGAGGAAGAGACCCCCAGCCCCACAGAACCCAGCACTGAGGCCCCGGAGGCCCCTGAG GAGCCGCTCCTGGGGGAGTTGACAGTGACAGGATCCTCCCCTGACTCGCTGAGCCTCTCC TGGACCGTCCCCCAGGGCCGCTTCGACTCCTTCACCGTGCAGTACAAGGACAGGGACGGG CAGCCCCAGGTGGTGCGTGTCAGGGGCGAGGAGAGCGAGGTCACCGTGGGGGGCCTGGAG CCCGGGCGCAAATACAAGATGCATCTGTACGGCCTCCACGAGGGGCAGCGCGTGGGCCCA GTGTCCACCGTGGGCATCACGGCGCCCCTGCCCACACCACTGCCGGTGGAGCCCCGCCTG GGGGAGCTGGCGGTGGCGGCCGTGACCTCGGACTCAGTGGGCCTCTCATGGACGGTGGCC CAGGGCCCCTTTGACTCCTTCCTGGTACAGTACAGGGACGCGCAGGGGCAGCCCCAGGCA GTGCCTGTGAGCGGAGACCTCCGAGCGGTCGCCGTCTCGGGGCTGGACCCGGCCCGCAAG TACAAGTTCCTGCTCTTTGGACTCCAGAATGGGAAACGCCACGGCCCAGTCCCTGTGGAG GCCAGGACCGCCCCAGACACCAAACCGTCTCCCCGCCTGGGGGAGCTGACTGTGACAGAT GCGACCCCTGACTCCGTGGGCCTCTCGTGGACGGTCCCTGAGGGCGAATTCGACTCCTTC GTGGTCCAGTACAAGGATAAGGATGGTCGGCTCCAGGTGGTGCCGGTGGCAGCCAACCAG CGGGAGGTCACAGTCCAGGGCCTGGAGCCCAGTAGGAAATACAGGTTCCTGCTCTATGGT CTGTCAGGCAGGAAACGACTGGGCCCCATCTCTGCTGACAGCACCACAGCTCCCCTGGAG AAGGAGCTACCTCCCCACCTGGGGGAACTGACCGTGGCTGAGGAGACCTCCAGCTCTCTG CGCCTGTCCTGGACGGTAGCCCAGGGCCCCTTTGACTCCTTCGTGGTCCAGTACAGGGAC ACGGACGGGCAGCCCAGGGCAGTGCCTGTGGCCGCAGACCAGCGCACAGTCACCGTAGAG GACCTGGAGCCTGGCAAGAAATACAAGTTTCTGCTCTACGGGCTCCTTGGGGGAAAGCGC CTGGGCCCGGTCTCTGCCCTGGGAATGACAGCCCCAGAAGAGGACACACCAGCCCCAGAG TTAGCCCCAGAGGCCCCTGAGCCTCCTGAAGAGCCCCGCCTAGGAGTGCTGACCGTGACC GACACAACCCCAGACTCCATGCGCCTCTCGTGGAGCGTGGCCCAGGGCCCCTTTGATTCC TTCGTGGTCCAGTATGAGGACACGAACGGGCAGCCCCAGGCCTTGCTCGTGGACGGCGAC CAGAGCAAGATCCTCATCTCAGGCCTGGAGCCCAGCACCCCCTACAGGTTCCTCCTCTAT GGCCTCCATGAAGGGAAGCGCCTGGGGCCCCTCTCAGCTGAGGGCACCACAGGGCTGGCT CCTGCTGGTCAGACCTCAGAGGAGTCAAGGCCCCGCCTGTCCCAGCTGTCTGTGACTGAC GTGACCACCAGTTCACTGAGGCTCAACTGGGAGGCCCCACCGGGGGCCTTCGACTCCTTC CTGCTCCGCTTTGGGGTTCCATCACCAAGCACTCTGGAGCCGCATCCGCGTCCACTGCTG CAGCGCGAGCTGATGGTGCCGGGGACGCGGCACTCGGCCGTGCTCCGGGACCTGCGTTCC GGGACTCTGTACAGCCTGACACTGTATGGGCTGCGAGGACCCCACAAGGCCGACAGCATC CAGGGAACCGCCCGCACCCTCAGCCCAGTTCTGGAGAGCCCCCGTGACCTCCAATTCAGT GAAATCAGGGAGACCTCAGCCAAGGTCAACTGGATGCCCCCACCATCCCGGGCGGACAGC TTCAAAGTCTCCTACCAGCTGGCGGACGGAGGTGGTGCCTTTGCCATGTGCTCATCGCCT CGCATTTCCTCTCCCCCCTGCACTCTGCCCACCCTCCAGCTGCCCTGGGGTTCCCTGGGT AACCCTCGATCCCCAATGTTTTCAGGGGAGCCTCAGAGTGTGCAGGTGGATGGCCAGGCC CGGACCCAGAAACTCCAGGGGCTGATCCCAGGCGCTCGCTATGAGGTGACCGTGGTCTCG GTCCGAGGCTTTGAGGAGAGTGAGCCTCTCACAGGCTTCCTCACCACGGTTCCTGACGGT CCCACACAGTTGCGTGCACTGAACTTGACCGAGGGATTCGCCGTGCTGCACTGGAAGCCC CCCCAGAATCCTGTGGACACCTATGACGTCCAGGTCACAGCCCCTGGGGCCCCGCCTCTG CAGGCGGAGACCCCAGGCAGCGCGGTGGACTACCCCCTGCATGACCTTGTCCTCCACACC AACTACACCGCCACAGTGCGTGGCCTGCGGGGCCCCAACCTCACTTCCCCAGCCAGCATC ACCTTCACCACAGGGCTAGAGGCCCCTCGGGACTTGGAGGCCAAGGAAGTGACCCCCCGC ACCGCCCTGCTCACTTGGACTGAGCCCCCAGTCCGGCCCGCAGGCTACCTGCTCAGCTTC CACACCCCTGGTGGACAGAACCAGGAGATCCTGCTCCCAGGAGGGATCACATCTCACCAG CTCCTTGGCCTCTTTCCCTCCACCTCCTACAATGCACGGCTCCAGGCCATGTGGGGCCAG AGCCTCCTGCCGCCCGTGTCCACCTCTTTCACCACGGGTGGGCTGCGGATCCCCTTCCCC AGGGACTGCGGGGAGGAGATGCAGAACGGAGCCGGTGCCTCCAGGACCAGCACCATCTTC CTCAACGGCAACCGCGAGCGGCCCCTGAACGTGTTTTGCGACATGGAGACTGATGGGGGC GGCTGGCTGGTGTTCCAGCGCCGCATGGATGGACAGACAGACTTCTGGAGGGACTGGGAG GACTATGCCCATGGTTTTGGGAACATCTCTGGAGAGTTCTGGCTGGGCAATGAGGCCCTG CACAGCCTGACACAGGCAGGTGACTACTCCATGCGCGTGGACCTGCGGGCTGGGGACGAG GCTGTGTTCGCCCAGTACGACTCCTTCCACGTAGACTCGGCTGCGGAGTACTACCGCCTC CACTTGGAGGGCTACCACGGCACCGCAGGGGACTCCATGAGCTACCACAGCGGCAGTGTC TTCTCTGCCCGTGATCGGGACCCCAACAGCTTGCTCATCTCCTGCGCTGTCTCCTACCGA GGGGCCTGGTGGTACAGGAACTGCCACTACGCCAACCTCAACGGGCTCTACGGGAGCACA GTGGACCATCAGGTGAGGGGTGGGGAGGCGGCTCAGAGCTGGGGTGGCTGGGGCTCGGCC TGCCTAGGTTTCAGCCCCACAGTGTAA >chr6_cox_hap1_122|geneid_v1.2_predicted_protein_122|4449_AA MAELMLLSEIADPTRFFTDNLLSPEDWGLQNEVAEEQTQLFRCPEQDVPLRVIASLHRAI QRDVQTKIEPVSPCSSVNSEASLLSADSSSQAKLLKRQQRMIKNRESACQSRRKKKEYLQ GLEARLQAVLADNQQLRRENAALRRRLEALLAENSELKLGSGNRKVVCIMVFLLFIAFNF GPVRDSVGQLQLYRHPDRSQPAFLDAIDRREDTFYVVSFRRDHLLLPAISHNKTSRPKMS LVMPAMAPNASGSCPDDCNDQGRCVRGRCVCFPGYTGPSCGWPSCPGDCQGRGRCVQGVC VCRAGFSGPDCSQRSCPRGCSQRGRCEGGRCVCDPGYTGDDCGMRSCPRGCSQRGRCENG RCVCNPGYAGEDCGVRSCPRGCSQRGRCKDGRCVCDPGYTGEDCGTRSCPWDCGEGGRCV DGRCVCWPGYTGEDCSTRTCPRDCRGRGRCEDGECICDTGYSGDDCGVRSCPGDCNQRGR CEDGRCVCWPGYTGTDCGSRACPRDCRGRGRCENGVCVCNAGYSGEDCGVRSCPGDCRGR GRCESGRCMCWPGYTGRDCGTRACPGDCRGRGRCVDGRCVCNPGFTGEDCGSRRCPGDCR GHGLCEDGVCVCDAGYSGEDCSTRSCPGGCRGRGQCLDGRCVCEDGYSGEDCGVRQCPND CSQHGVCQDGVCICWEGYVSEDCSIRTCPSNCHGRGRCEEGRCLCDPGYTGPTCATRMCP ADCRGRGRCVQGVCLCHVGYGGEDCGQEEPPASACPGGCGPRELCRAGQCVCVEGFRGPD CAIQTCPGDCRGRGECHDGSCVCKDGYAGEDCGEEVPTIEGMRMHLLEETTVRTEWTPAP GPVDAYEIQFIPTTEGASPPFTARVPSSASAYDQRGLAPGQEYQVTVRALRGTSWGLPAS KTITTMIDGPQDLRVVAVTPTTLELGWLRPQAEVDRFVVSYVSAGNQRVRLEVPPEADGT LLTDLMPGVEYVVTVTAERGRAVSYPASVRANTGVDRVAASRHPKPEVLGSSADGALLVS LDGLRGQFERVVLRWRPQPPAEGPGGELTVPGTTRTVSLPDLRPGTTYHVEVHGVRAGQT SKSYAFITTTGSSPLGLLGTTDEPPPSGPSTTQGAQAPLLQQRPQELGELRVLGRDETGR LRVVWTAQPDTFAYFQLRMRVPEGPGAHEEVLPGDVRQALVPPPPPGTPYELSLHGVPPG GKPSDPIIYQGIMDKDEEKPGKSSGPPRLGELTVTDRTSDSLLLRWTVPEGEFDSFVIQY KDRDGQPQVVPVEGPQRSAVITSLDPGRKYKFVLYGFVGKKRHGPLVAEAKILPQSDPSP GTPPHLGNLWVTDPTPDSLHLSWTVPEGQFDTFMVQYRDRDGRPQVVPVEGPERSFVVSS LDPDHKYRFTLFGIANKKRYGPLTADGTTAPERKEEPPRPEFLEQPLLGELTVTGVTPDS LRLSWTVAQGPFDSFMVQYKDAQGQPQAVPVAGDENEVTVPGLDPDRKYKMNLYGLRGRQ RVGPESVVAKTAPQEDVDETPSPTELGTEAPESPEEPLLGELTVTGSSPDSLSLFWTVPQ GSFDSFTVQYKDRDGRPRAVRVGGKESEVTVGGLEPGHKYKMHLYGLHEGQRVGPVSAVG VTAPQQEETPPATESPLEPRLGELTVTDVTPNSVGLSWTVPEGQFDSFIVQYKDKDGQPQ VVPVAADQREVTVYNLEPERKYKMNMYGLHDGQRMGPLSVVIVTAPATEASKPPLEPRLG ELTVTDITPDSVGLSWTVPEGEFDSFVVQYKDRDGQPQVVPVAADQREVTIPDLEPSRKY KFLLFGIQDGKRRSPVSVEAKTVARGDASPGAPPRLGELWVTDPTPDSLRLSWTVPEGQF DSFVVQFKDKDGPQVVPVEGHERSVTVTPLDAGRKYRFLLYGLLGKKRHGPLTADGTTEA RSAMDDTGTKRPPKPRLGEELQVTTVTQNSVGLSWTVPEGQFDSFVVQYKDRDGQPQVVP VEGSLREVSVPGLDPAHRYKLLLYGLHHGKRVGPISAVAITAGREETETETTAPTPPAPE PHLGELTVEEATSHTLHLSWMVTEGEFDSFEIQYTDRDGQLQMVRIGGDRNDITLSGLES DHRYLVTLYGFSDGKHVGPVHVEALTVPEEEKPSEPPTATPEPPIKPRLGELTVTDATPD SLSLSWTVPEGQFDHFLVQYRNGDGQPKAVRVPGHEEGVTISGLEPDHKYKMNLYGFHGG QRMGPVSVVGVTAAEEETPSPTEPSMEAPEPAEEPLLGELTVTGSSPDSLSLSWTVPQGR FDSFTVQYKDRDGRPQVVRVGGEESEVTVGGLEPGRKYKMHLYGLHEGRRVGPVSAVGVT APEEESPDAPLAKLRLGQMTVRDITSDSLSLSWTVPEGQFDHFLVQFKNGDGQPKAVRVP GHEDGVTISGLEPDHKYKMNLYGFHGGQRVGPVSAVGLTAPGKDEEMAPASTEPPTPEPP IKPRLEELTVTDATPDSLSLSWTVPEGQFDHFLVQYKNGDGQPKATRVPGHEDRVTISGL EPDNKYKMNLYGFHGGQRVGPVSAIGVTAAEEETPSPTEPSMEAPEPPEEPLLGELTVTG SSPDSLSLSWTVPQGRFDSFTVQYKDRDGRPQVVRVGGEESEVTVGGLEPGRKYKMHLYG LHEGRRVGPVSTVGVTAPQEDVDETPSPTEPGTEAPEPPEEPLLGELTVTGSSPDSLSLS WTVPQGRFDSFTVQYKDRDGRPQAVRVGGQESKVTVRGLEPGRKYKMHLYGLHEGRRLGP VSAVGVTEDEAETTQAVPTMTPEPPIKPRLGELTMTDATPDSLSLSWTVPEGQFDHFLVQ YRNGDGQPKAVRVPGHEDGVTISGLEPDHKYKMNLYGFHGGQRVGPISVIGVTAAEEETP SPTELSTEAPEPPEEPLLGELTVTGSSPDSLSLSWTIPQGHFDSFTVQYKDRDGRPQVMR VRGEESEVTVGGLEPGRKYKMHLYGLHEGRRVGPVSTVGVTAPEDEAETTQAVPTTTPEP PNKPRLGELTVTDATPDSLSLSWMVPEGQFDHFLVQYRNGDGQPKVVRVPGHEDGVTISG LEPDHKYKMNLYGFHGGQRVGPISVIGVTAAEEETPAPTEPSTEAPEPPEEPLLGELTVT GSSPDSLSLSWTIPQGRFDSFTVQYKDRDGRPQVVRVRGEESEVTVGGLEPGCKYKMHLY GLHEGQRVGPVSAVGVTAPKDEAETTQAVPTMTPEPPIKPRLGELTVTDATPDSLSLSWM VPEGQFDHFLVQYRNGDGQPKAVRVPGHEDGVTISGLEPDHKYKMNLYGFHGGQRVGPVS AIGVTGPKDIPLTLSPSFSTAEEETPSPTEPSTEAPEAPEEPLLGELTVTGSSPDSLSLS WTVPQGRFDSFTVQYKDRDGQPQVVRVRGEESEVTVGGLEPGRKYKMHLYGLHEGQRVGP VSTVGITAPLPTPLPVEPRLGELAVAAVTSDSVGLSWTVAQGPFDSFLVQYRDAQGQPQA VPVSGDLRAVAVSGLDPARKYKFLLFGLQNGKRHGPVPVEARTAPDTKPSPRLGELTVTD ATPDSVGLSWTVPEGEFDSFVVQYKDKDGRLQVVPVAANQREVTVQGLEPSRKYRFLLYG LSGRKRLGPISADSTTAPLEKELPPHLGELTVAEETSSSLRLSWTVAQGPFDSFVVQYRD TDGQPRAVPVAADQRTVTVEDLEPGKKYKFLLYGLLGGKRLGPVSALGMTAPEEDTPAPE LAPEAPEPPEEPRLGVLTVTDTTPDSMRLSWSVAQGPFDSFVVQYEDTNGQPQALLVDGD QSKILISGLEPSTPYRFLLYGLHEGKRLGPLSAEGTTGLAPAGQTSEESRPRLSQLSVTD VTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRHSAVLRDLRS GTLYSLTLYGLRGPHKADSIQGTARTLSPVLESPRDLQFSEIRETSAKVNWMPPPSRADS FKVSYQLADGGGAFAMCSSPRISSPPCTLPTLQLPWGSLGNPRSPMFSGEPQSVQVDGQA RTQKLQGLIPGARYEVTVVSVRGFEESEPLTGFLTTVPDGPTQLRALNLTEGFAVLHWKP PQNPVDTYDVQVTAPGAPPLQAETPGSAVDYPLHDLVLHTNYTATVRGLRGPNLTSPASI TFTTGLEAPRDLEAKEVTPRTALLTWTEPPVRPAGYLLSFHTPGGQNQEILLPGGITSHQ LLGLFPSTSYNARLQAMWGQSLLPPVSTSFTTGGLRIPFPRDCGEEMQNGAGASRTSTIF LNGNRERPLNVFCDMETDGGGWLVFQRRMDGQTDFWRDWEDYAHGFGNISGEFWLGNEAL HSLTQAGDYSMRVDLRAGDEAVFAQYDSFHVDSAAEYYRLHLEGYHGTAGDSMSYHSGSV FSARDRDPNSLLISCAVSYRGAWWYRNCHYANLNGLYGSTVDHQVRGGEAAQSWGGWGSA CLGFSPTV* # Gene 123 (Reverse). 3 exons. 364 aa. Score = 9.31 Terminal 3503675 3504141 2.66 - 2 0 0.00 -0.49 19.88 0.00 AA 209:364 chr6_cox_hap1_123 Internal 3504217 3504798 8.32 - 2 1 3.69 6.03 18.72 0.00 AA 15:209 chr6_cox_hap1_123 First 3506793 3506835 -1.67 - 0 1 2.66 0.24 3.99 0.00 AA 1: 15 chr6_cox_hap1_123 >chr6_cox_hap1_123|geneid_v1.2_predicted_cDNA_123|1092_NN ATGAAGGAGGACTTGAAAGGCAATGATGGATGTGAAAGGAAAGGTGCTGACCTGAACCTG GTTCATCCCTTTCTGACCAAAACTGTTCACTCACCGTGGAAGGGACTAAGCATCCATATG GAGACGCCACCAGTCAATACAATTGGAGAAAAGGACACCTCTCAGCCGCAACAAGAGTGG GAAAAGAACCTTCGGGAGAACCTTGATTCAGTTATTCAGATTAGGCAGCAGCCCCGAGAC CCTCCTACCGAAACGCTTGAGCTGGAAGTAAGCCCAGATCCAGCCAGCCAAATTCTAGAG CATACTCAAGGAGCTGAAAAACTGGTTGCTGAACTTGAAGGAGACTCTCATAAGTCTCAT GGATCAACCAGTCAGATGCCAGAGGCCCTTCAAGCTTCTGATCTCTGGTACTGCCCCGAT GGGAGCTTTGTCAAGAAGATCGTAATCCGTGGCCATGGCTTGGACAAACCCAAACTAGGC TCCTGCTGCCGGGTACTGGCTTTGGGGTTTCCTTTCGGATCAGGGCCGCCAGAGGGCTGG ACAGAGCTAACTATGGGCGTAGGGCCATGGAGGGAGGAAACTTGGGGGGAGCTCATAGAG AAATGCTTGGAGTCCATGTGTCAAGGCCGAGACTCCTGGGAGCTGGAGACTAGCGAGAAG GAAGCCCTGGCCAGGGAAGAACGTGCAAGGGGCACAGAACTATTTCGAGCTGGGAACCCT GAAGGAGCTGCCCGATGCTATGGACGGGCTCTTCGGCTGCTCCTGACTTTACCCCCACCT GGCCCTCCAGAACGAACTGTCCTTCATGCCAATCTGGCTGCCTGTCAGTTGTTGCTAGGG CAGCCTCAGTTGGCAGCCCAGAGCTGTGACCGGGTGTTGGAGCGGGAGCCTGGCCATTTA AAGGCCTTATACCGAAGGGGGGTTGCCCAGGCTGCCCTTGGGAACCTGGAAAAAGCAACT GCTGACCTCAAGAAGGTGCTGGCGATAGATCCCAAAAACCGGGCAGCCCAGGAGGAACTG GGGAAGGTGGTCATTCAGGGGAAGAACCAGGATGCAGGGCTGGCTCAGGGTCTGCGCAAG ATGTTTGGCTGA >chr6_cox_hap1_123|geneid_v1.2_predicted_protein_123|364_AA MKEDLKGNDGCERKGADLNLVHPFLTKTVHSPWKGLSIHMETPPVNTIGEKDTSQPQQEW EKNLRENLDSVIQIRQQPRDPPTETLELEVSPDPASQILEHTQGAEKLVAELEGDSHKSH GSTSQMPEALQASDLWYCPDGSFVKKIVIRGHGLDKPKLGSCCRVLALGFPFGSGPPEGW TELTMGVGPWREETWGELIEKCLESMCQGRDSWELETSEKEALAREERARGTELFRAGNP EGAARCYGRALRLLLTLPPPGPPERTVLHANLAACQLLLGQPQLAAQSCDRVLEREPGHL KALYRRGVAQAALGNLEKATADLKKVLAIDPKNRAAQEELGKVVIQGKNQDAGLAQGLRK MFG* # Gene 124 (Reverse). 4 exons. 168 aa. Score = 11.28 Terminal 3524172 3524348 10.79 - 0 0 0.00 5.61 31.05 0.00 AA 110:168 chr6_cox_hap1_124 Internal 3524487 3524609 3.45 - 0 0 2.80 2.75 12.80 0.00 AA 69:109 chr6_cox_hap1_124 Internal 3525318 3525463 -1.29 - 2 0 4.61 -5.67 10.86 0.00 AA 20: 68 chr6_cox_hap1_124 First 3527907 3527964 -1.67 - 0 1 2.36 3.34 -0.23 0.00 AA 1: 20 chr6_cox_hap1_124 >chr6_cox_hap1_124|geneid_v1.2_predicted_cDNA_124|504_NN ATGGACGAAAAGGGACGCAGCCGGGAGAGCGACTGCCCCAGGTGGGGGCTGGGGGGACCC CAGACTGCCCAGGCCCCTGGCTTCGTGGTGCCCACGCACGCGGGGACTGTGGGCACGCTG CCGCTGGGGGGCTACGTAGCGCCCGGATACCCCCTGCAGCTGCAGCCTTGCACTGCTTAC GTGCCGGTCTACCCGGTGGGCACGGGCCCAGGGCTGGCCCTACTGGAGCCGAGGCGCCCG CCACACGACTACATGCCCATCGCGGTGCTGACCACCATCTGTTGCTTCTGGCCTACTGGC ATCATTGCCATCTTCAAGGCCGTGCAGGTGCGCACGGCCTTGGCCCGCGGAGACATGGTG TCGGCCGAGATCGCTTCACGCGAGGCCCGGAACTTCTCCTTCATCTCCCTGGCCGTGGGC ATCGCGGCCATGGTGCTCTGTACCATCCTCACCGTAGTCATCATCATCGCCGCGCAGCAC CACGAGAACTACTGGGATCCCTAA >chr6_cox_hap1_124|geneid_v1.2_predicted_protein_124|168_AA MDEKGRSRESDCPRWGLGGPQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAY VPVYPVGTGPGLALLEPRRPPHDYMPIAVLTTICCFWPTGIIAIFKAVQVRTALARGDMV SAEIASREARNFSFISLAVGIAAMVLCTILTVVIIIAAQHHENYWDP* # Gene 125 (Forward). 9 exons. 378 aa. Score = 15.18 First 3529547 3529729 4.55 + 0 0 1.09 0.04 22.20 0.00 AA 1: 61 chr6_cox_hap1_125 Internal 3530724 3530934 3.39 + 0 1 6.59 3.49 5.86 0.00 AA 62:132 chr6_cox_hap1_125 Internal 3532593 3532676 1.70 + 2 1 2.92 3.89 6.53 0.00 AA 132:160 chr6_cox_hap1_125 Internal 3541414 3541585 0.18 + 2 2 -0.15 3.66 7.68 0.00 AA 160:217 chr6_cox_hap1_125 Internal 3541666 3541775 1.12 + 1 1 0.11 4.03 9.10 0.00 AA 217:254 chr6_cox_hap1_125 Internal 3541875 3541970 0.17 + 2 1 3.46 3.62 2.31 0.00 AA 254:286 chr6_cox_hap1_125 Internal 3542052 3542222 1.77 + 2 1 2.87 4.10 6.46 0.00 AA 286:343 chr6_cox_hap1_125 Internal 3542315 3542394 4.88 + 2 0 4.36 3.58 12.79 0.00 AA 343:369 chr6_cox_hap1_125 Terminal 3543200 3543226 -2.58 + 0 0 5.21 0.00 -1.77 0.00 AA 370:378 chr6_cox_hap1_125 >chr6_cox_hap1_125|geneid_v1.2_predicted_cDNA_125|1134_NN ATGCTGGGGCTCTGGGGGCAGCGGCTCCCCGCGGCGTGGGTCCTGCTTCTGTTGCCTTTC CTGCCGCTGCTGCTGCTTGCAGCCCCCGCGCCCCACCGCGAGTCCTACAAGCCGGTCATC GTGGTGCATGGGCTCTTCGACAGCTCGTACAGCTTCCGCCACCTGCTGGAATACATCAAT GAGATGGGACAGTATGGAGGTGAGTGGGCACTAGACTCCATAGAATGCCCTGAGTTTTGG GGGAACAGAGGTTTATGGTCACTTAGCATTGCCATTCGCTTGCCAGACACGGACTACTTG AAGTGGCTGTTCCCCACCTCCATGCGGTCTAACCTCTATCGGATCTGCTATAGCCCCTGG GGCCAGGAATTCTCCATCTGCAACTACTGGCATGATCCCCACCACGATGACTTGTACCTC AATGCCAGCAGCTTCCTGGCCCTGATCAATGGGGAAAGAGACCATCCCAATGCCACAGGG CCTGGCCTACTCAATCTCTCCCACCTCATCCTCTGGCATGGACGCAGTCAGGGAGTCTGC TCCAAGCAGACACTGGTGGTCCCGCTCCACTACAACGAGTCCTACAGCCAACCAGTGTAC AAGCCCTACCTGACCTTGTGCGCTGGGAGGCGCATCTGCAGCACTTACAGGACCATGTAC CGCGTTATGTGGCGGGAGGTGAAGCGGGAGGTTCAGCAGACCCATGCAGTGTGCTGCCAG GGCTGGAAGAAGCGGCACCCGGGGGCGCTCACCTGTGAAGCCATCTGCGCCAAGCCTTGC CTGAACGGAGGCGTCTGCGTTAGGCCTGACCAGTGCGAGTGCGCCCCCGGCTGGGGAGGG AAGCACTGTCATGTGGACGTGGATGAATGTAGGACCAGCATCACCCTCTGCTCGCACCAT TGTTTTAATACGGCAGGCAGCTTCACCTGCGGCTGCCCCCATGACCTAGTGCTAGGCGTG GACGGGCGCACCTGCATGGAGGGGTCCCCAGAGCCCCCAACCAGTGCCAGCATACTCAGC GTGGCCGTTCGGGAGGCGGAAAAAGATGAGCGCGCTCTGAAGCAGGAGATTCACGAGCTG CGAGGGCGCCTGGAGCGGCTGGAGCAGTTTTTTTGCTGTTATCCAGATAATTAA >chr6_cox_hap1_125|geneid_v1.2_predicted_protein_125|378_AA MLGLWGQRLPAAWVLLLLPFLPLLLLAAPAPHRESYKPVIVVHGLFDSSYSFRHLLEYIN EMGQYGGEWALDSIECPEFWGNRGLWSLSIAIRLPDTDYLKWLFPTSMRSNLYRICYSPW GQEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATGPGLLNLSHLILWHGRSQGVC SKQTLVVPLHYNESYSQPVYKPYLTLCAGRRICSTYRTMYRVMWREVKREVQQTHAVCCQ GWKKRHPGALTCEAICAKPCLNGGVCVRPDQCECAPGWGGKHCHVDVDECRTSITLCSHH CFNTAGSFTCGCPHDLVLGVDGRTCMEGSPEPPTSASILSVAVREAEKDERALKQEIHEL RGRLERLEQFFCCYPDN* # Gene 126 (Reverse). 6 exons. 247 aa. Score = 11.82 Terminal 3544241 3544413 -0.85 - 2 0 0.00 3.23 5.53 0.00 AA 190:247 chr6_cox_hap1_126 Internal 3544931 3545003 2.50 - 0 1 2.37 4.13 9.00 0.00 AA 166:190 chr6_cox_hap1_126 Internal 3545130 3545225 0.98 - 0 0 1.88 7.24 1.29 0.00 AA 134:165 chr6_cox_hap1_126 Internal 3545390 3545565 3.92 - 2 0 2.49 -0.15 18.78 0.00 AA 75:133 chr6_cox_hap1_126 Internal 3545902 3546035 1.36 - 1 1 2.60 1.89 9.17 0.00 AA 30: 75 chr6_cox_hap1_126 First 3546262 3546350 3.92 - 0 2 1.47 3.22 15.26 0.00 AA 1: 30 chr6_cox_hap1_126 >chr6_cox_hap1_126|geneid_v1.2_predicted_cDNA_126|741_NN ATGGCCTTCTACAATGGCTGGATCCTCTTCCTGGCTGTGCTCGCCATCCCTGTGTGTGCC GTGCGAGGACGCAACGTCGAGAACATGAAGATCTTGCGTCTAATGCTGCTCCACATCAAA TACCTGTACGGGATCCGAGTGGAGGTGCGAGGGGCTCACCACTTCCCTCCCTCGCAGCCC TATGTTGTTGTCTCCAACCACCAGAGCTCTCTCGATCTGCTTGGGATGATGGAGGTACTG CCAGGCCGCTGTGTGCCCATTGCCAAGCGCGAGCTACTGTGGGCTGGCTCTGCCGGGCTG GCCTGCTGGCTGGCAGGAGTCATCTTCATCGACCGGAAGCGCACGGGGGATGCCATCAGT GTCATGTCTGAGGTCGCCCAGACCCTGCTCACCCAGGACGTGAGGGTCTGGGTGTTTCCT GAGGGAACGAGAAACCACAATGGCTCCATGCTGCCCTTCAAACGTGGCGCCTTCCATCTT GCAGTGCAGGCCCAGGTTCCCATTGTCCCCATAGTCATGTCCTCCTACCAAGACTTCTAC TGCAAGAAGGAGCGTCGCTTCACCTCGGGACAATGTCAGGTGCGGGTGCTGCCCCCAGTG CCCACGGAAGGGCTGACACCAGATGACGTCCCAGCTCTGGCTGACAGAGTCCGGCACTCC ATGCTCACTGTTTTCCGGGAAATCTCCACTGATGGCCGGGGTGGTGGTGACTATCTGAAG AAGCCTGGGGGCGGTGGGTGA >chr6_cox_hap1_126|geneid_v1.2_predicted_protein_126|247_AA MAFYNGWILFLAVLAIPVCAVRGRNVENMKILRLMLLHIKYLYGIRVEVRGAHHFPPSQP YVVVSNHQSSLDLLGMMEVLPGRCVPIAKRELLWAGSAGLACWLAGVIFIDRKRTGDAIS VMSEVAQTLLTQDVRVWVFPEGTRNHNGSMLPFKRGAFHLAVQAQVPIVPIVMSSYQDFY CKKERRFTSGQCQVRVLPPVPTEGLTPDDVPALADRVRHSMLTVFREISTDGRGGGDYLK KPGGGG* # Gene 127 (Forward). 3 exons. 110 aa. Score = 1.24 First 3553477 3553590 0.93 + 0 0 3.80 1.10 7.48 0.00 AA 1: 38 chr6_cox_hap1_127 Internal 3554974 3555091 2.59 + 0 1 4.58 4.38 5.54 0.00 AA 39: 78 chr6_cox_hap1_127 Terminal 3555194 3555291 -2.28 + 2 0 5.95 0.00 -2.13 0.00 AA 78:110 chr6_cox_hap1_127 >chr6_cox_hap1_127|geneid_v1.2_predicted_cDNA_127|330_NN ATGGCAGCAGCGGAGGAGGAGGACGGGGGCCCCGAAGGGCCAAATCGCGAGCGGGGCGGG GCGGGCGCGACCTTCGAATGTAATATATGTTTGGAGACTGCTCGGGAAGCTGTGGGATTC CAGCCATTTGGTGATACCGGGGGCTTCCACTTCTCATTTGGTGTTGGTGCTTTTCCCTTT GGCTTTTTCACCACCGTCTTCAATGCCCATGAGCCTTTCCGCCGGGGTACAGGTGTGGAT CTGGGACAGGGTCACCCGGCCTCCAGCTGGCAGGATTCCCTCTTCCTGTTTCTCGCCATC TTCTTCTTTTTTTGGCTGCTCAGTATTTGA >chr6_cox_hap1_127|geneid_v1.2_predicted_protein_127|110_AA MAAAEEEDGGPEGPNRERGGAGATFECNICLETAREAVGFQPFGDTGGFHFSFGVGAFPF GFFTTVFNAHEPFRRGTGVDLGQGHPASSWQDSLFLFLAIFFFFWLLSI* # Gene 128 (Reverse). 27 exons. 1379 aa. Score = 44.10 Terminal 3556108 3556204 1.05 - 1 0 0.00 4.84 7.87 0.00 AA 1347:1379 chr6_cox_hap1_128 Internal 3556316 3556442 1.47 - 2 2 5.16 4.50 1.68 0.00 AA 1305:1347 chr6_cox_hap1_128 Internal 3557212 3557353 1.55 - 0 1 3.90 4.96 3.09 0.00 AA 1258:1305 chr6_cox_hap1_128 Internal 3558289 3558353 -1.06 - 2 0 0.64 3.85 3.12 0.00 AA 1236:1257 chr6_cox_hap1_128 Internal 3558520 3558715 1.23 - 0 1 2.01 3.69 7.03 0.00 AA 1171:1236 chr6_cox_hap1_128 Internal 3558846 3558952 1.29 - 2 0 3.55 2.03 7.36 0.00 AA 1135:1170 chr6_cox_hap1_128 Internal 3562204 3562357 6.41 - 0 1 -0.74 6.39 20.06 0.00 AA 1084:1135 chr6_cox_hap1_128 Internal 3562609 3562744 4.58 - 1 0 1.19 4.43 15.53 0.00 AA 1038:1083 chr6_cox_hap1_128 Internal 3562928 3563118 6.27 - 0 2 1.39 0.46 25.40 0.00 AA 975:1038 chr6_cox_hap1_128 Internal 3563219 3563466 7.63 - 2 0 4.37 0.33 24.53 0.00 AA 892:974 chr6_cox_hap1_128 Internal 3563685 3563758 -0.77 - 1 1 2.37 1.69 4.48 0.00 AA 867:892 chr6_cox_hap1_128 Internal 3566443 3566465 -1.54 - 0 2 1.10 2.87 2.70 0.00 AA 860:867 chr6_cox_hap1_128 Internal 3566671 3566832 1.50 - 0 0 4.36 4.28 3.28 0.00 AA 806:859 chr6_cox_hap1_128 Internal 3570870 3571112 2.45 - 0 0 2.81 1.77 11.76 0.00 AA 725:805 chr6_cox_hap1_128 Internal 3571286 3571383 -0.29 - 2 0 -0.81 3.71 7.43 0.00 AA 692:724 chr6_cox_hap1_128 Internal 3571887 3572034 0.43 - 0 1 2.32 3.14 5.38 0.00 AA 643:692 chr6_cox_hap1_128 Internal 3573621 3573693 -0.25 - 1 0 1.61 4.46 2.79 0.00 AA 618:642 chr6_cox_hap1_128 Internal 3576090 3576473 4.47 - 1 2 3.72 3.96 12.18 0.00 AA 490:618 chr6_cox_hap1_128 Internal 3578198 3578232 -1.37 - 0 2 0.71 4.42 1.38 0.00 AA 479:490 chr6_cox_hap1_128 Internal 3578656 3578855 -1.35 - 2 0 2.96 2.49 0.96 0.00 AA 412:478 chr6_cox_hap1_128 Internal 3579110 3579362 3.55 - 0 1 3.99 4.41 8.78 0.00 AA 328:412 chr6_cox_hap1_128 Internal 3585718 3585902 1.02 - 2 0 3.67 5.82 0.82 0.00 AA 266:327 chr6_cox_hap1_128 Internal 3588646 3588798 0.23 - 2 1 3.28 4.18 1.88 0.00 AA 215:266 chr6_cox_hap1_128 Internal 3592954 3593067 3.10 - 2 1 3.50 2.63 11.06 0.00 AA 177:215 chr6_cox_hap1_128 Internal 3595086 3595241 1.59 - 2 1 3.10 4.93 4.41 0.00 AA 125:177 chr6_cox_hap1_128 Internal 3595362 3595598 0.54 - 2 1 2.75 3.11 5.07 0.00 AA 46:125 chr6_cox_hap1_128 First 3595713 3595848 0.36 - 0 1 4.39 0.58 5.96 0.00 AA 1: 46 chr6_cox_hap1_128 >chr6_cox_hap1_128|geneid_v1.2_predicted_cDNA_128|4137_NN ATGACCCTGTCAGGTTTCATAGGCCCAGACTGTGAGGTGAATCCAGACAACTGTGTCAGC CACCAGTGTCAGAATGGGGGCACTTGCCAGGATGGGCTGGACACCTACACCTGCCTCTGC CCAGAAACCTGGACAGGCTGGGACTGCTCCGAAGATGTGGATGAGTGTGAGGCCCAGGGT CCCCCTCACTGCAGAAACGGGGGCACCTGCCAGAACTCTGCTGGTAGCTTTCACTGCGTG TGTGTGAGTGGCTGGGGCGGCACAAGCTGTGAGGAGAACCTGGATGACTGTATTGCTGCC ACCTGTGCCCCGGGATCCACCTGCATTGACCGGGTGGGCTCTTTCTCCTGCCTCTGCCCA CCTGGACGCACAGGACTCCTGTGCCACTTGGAAGACATGTGTCTGAGCCAGCCGTGCCAT GGGGATGCCCAATGCAGCACCAACCCCCTCACAGGCTCCACACTCTGCCTGTGTCAGCCT GGCTATTCGGGGCCCACCTGCCACCAGGACCTGGACGAGTGTCTGATGGGCTTAGAAGGG CAGCTCTGTGAGGTGGAGACCAACGAGTGTGCCTCAGCTCCCTGCCTGAACCACGCGGAT TGCCATGACCTGCTCAACGGCTTCCAGTGCATCTGCCTGCCTGGACCCACCTGTAGTGAG GAGATGACAGCTTGTCACTCAGGGCCATGTCTCAATGGCGGCTCCTGCAACCCTAGCCCT GGAGGCTACTACTGCACCTGCCCTCCAAGCCACACAGGGCCCCAGTGCCAAACCAGCACT GACTACTGTGTGTCTGGCATAGACGTCTCTTCCCTTTGCCACAATGGAGGCCTCTGTGTC GACAGCGGCCCCTCCTATTTCTGCCACTGCCCCCCTGGATTCCAAGGCAGCCTGTGCCAG GATCACGTGAACCCATGTGAGTCCAGGCCTTGCCAGAACGGGGCCACCTGCATGGCCCAG CCCAGTGGGTATCTCTGCCAGTGTGCCCCAGGCTACGATGGACAGAACTGCTCAAAGGAA CTCGATGCTTGTCAGTCCCAACCCTGTCACAACCATGGAACCTGTACTCCCAAACCTGGA GGCTTCCACTGTGCCTGCCCTCCAGGCTTTGTGGGGCTACGCTGTGAGGGAGACGTGGAC GAGTGTCTGGACCAGCCCTGCCACCCCACAGGCACTGCAGCCTGCCACTCTCTGGCCAAT GCCTTCTACTGCCAGTGTCTGCCTGGACACACAGGCCAGTGGTGTGAGGTGGAGATAGAC CCCTGCCACAGCCAACCCTGCTTTCATGGAGGGACCTGTGAGGCCACAGCAGGATCACCC CTGGGTTTCATCTGCCACTGCCCCAAGGCAAGTGACCACAAATCTGCCTTCTCTGTTGCC CCCTATGCTGACAAGGCAAGAATACCTCAGTTGGAATCCCAGAAGGGACTGTGGAGGAAG AGGAAGACATATGATCCTATTTCTAAGGATCCAGCCTATGACCAGTACTGCCATGATCAC TTCCACAACGGGCACTGTGAGAAAGGCTGCAACACTGCAGAGTGTGGCTGGGATGGAGGT GACTGCAGGCCTGAAGATGGGGACCCAGAGTGGGGGCCCTCCCTGGCCCTGCTGGTGGTA CTGAGCCCCCCAGCCCTAGACCAGCAGCTGTTTGCCCTGGCCCGGGTGCTGTCCCTGACT CTGAGGGTAGGACTCTGGGTAAGGAAGGATCGTGATGGCAGGGACATGGTGTACCCCTAT CCTGGGGCCCGGGCTGAAGAAAAGCTAGGAGGAACTCGGGACCCCACCTATCAGGAGAGA GCAGCCCCTCAAACGCAGCCCCTGGGCAAGGAGACCGACTCCCTCAGTGCTGGGGCACTG AAGCCAAAGGCAGAAGTTGATGAGGATGGAGTTGTGATGTGCTCAGGCCCTGAGGAGGGA GAGGAGCTTCTGCTCCGTAGCAGACAAACTGCAGTGGACGCTCGCACAGAGGACGGGACC ACACCCTTGATGCTGGCTGCCAGGCTGGCGGTGGAAGACCTGGTTGAAGAACTGATTGCA GCCCAAGCAGACGTGGGGGCCAGAGATAAATGGGGGAAAACTGCGCTGCACTGGGCTGCT GCCGTGAACAACGCCCGAGCCGCCCGCTCGCTTCTCCAGGCCGGAGCCGATAAAGATGCC CAGGACAACAGGGAGCAGACGCCGCTATTCCTGGCGGCGCGGGAAGGAGCGGTGGAAGTA GCCCAGCTACTGCTGGGGCTGGGGGCAGCCCGAGAGCTGCGGGACCAGGCTGGGCTAGCG CCGGCGGACGTCGCTCACCAACGTAACCACTGGGATCTGCTGACGCTGCTGGAAGGGGCT GGGCCACCAGAGGCCCGTCACAAAGCCACGCCGGGCCGCGAGGCTGGGCCCTTCCCGCGC GCACGGACGGTGTCAACTGAACTCCTTCTGGACCTGGTGGCTGAAGCCCAGTCCCGCCGC CTGGAGGAGCAGAGGGCCACCTTCTACACCCCCCAAAACCCCTCAAGCCTAGCCCCTGCC CCACTCCGTCCTCTCGAGGACAGAGAACAGCTTTACAGCACTATCCTCAGTCACCAGTGC CAGCGGATGGAAGCCCAGCGGAAACACGCCCTAAACTGCCACCGAATGAAGCCTGCTCTC TTTAGCGTCCTGTGTGAAATCAAGGAGAAAACTGGCCTCAGCATTCGGAGCTCCCAGGAG GAGGAGCCGGTGGACCCACAGCTGATGCGCTTGGACAACATGCTTCTGGCAGAGGGTGTG GCTGGGCCCGAGAAAGGGGGCGGCTCAGCAGCAGCAGCTGCAGCCGCTGCAGCCTCTGGT GGTGGTGTGTCCCCTGACAACTCCATCGAACACTCGGACTATCGCAGCAAACTTGCCCAG ATCCGTCACATATACCACTCGGAGCTGGAGAAGTATGAGCAGGCATGTAATGAGTTCACG ACCCATGTCATGAACCTGCTGAGGGAGCAGAGCCGCACCAGGCCCGTGGCCCCCAAAGAG ATGGAACGCATGGTGAGCATCATCCATCGAAAGTTCAGCGCCATCCAGATGCAGCTGAAG CAGAGCACCTGCGAGGCTGTGATGATCCTGCGCTCCCGTTTCCTGGATGCCAGACGAAAG CGCCGTAACTTCAGCAAACAGGCCACTGAGGTCCTAAATGAGTATTTCTACTCCCACCTG AGTAACCCATATCCTAGTGAGGAGGCCAAGGAGGAGCTTGCCAAGAAGTGTGGCATCACC GTGTCTCAGGTCTCCAACTGGTTTGGCAACAAGAGGATTCGCTATAAGAAAAACATCGGA AAGTTCCAAGAGGAGGCAAACATCTATGCTGTCAAGACCGCCGTGTCAGTCACCCAGGGG GGCCACAGCCGCACCAGCTCCCCGACACCCCCTTCCTCTGCAGGGGCAGTAGTAGGTGCT CAAAACATCACAGCCCGGATTGGCGAGCCACTGGTGCTGAAGTGTAAGGGGGCCCCCAAG AAACCACCCCAGCGGCTGGAATGGAAACTGAACACAGGCCGGACAGAAGCTTGGAAGGTC CTGTCTCCCCAGGGAGGAGGCCCCTGGGACAGTGTGGCTCGTGTCCTTCCCAACGGCTCC CTCTTCCTTCCGGCTGTCGGGATCCAGGATGAGGGGATTTTCCGGTGCCAGGCAATGAAC AGGAATGGAAAGGAGACCAAGTCCAACTACCGAGTCCGTGTCTACCAGATTCCTGGGAAG CCAGAAATTGTAGATTCTGCCTCTGAACTCACGGCTGGTGTTCCCAATAAGGGTGTGCCC TTGCCCCTTCCCCCCAGCCCTGTGCTGATCCTCCCTGAGATAGGGCCTCAGGACCAGGGA ACCTACAGCTGTGTGGCCACCCATTCCAGCCACGGGCCCCAGGAAAGCCGTGCTGTCAGC ATCAGCATCATCGGCTCTGTGGGAGGATCAGGGCTGGGAACTCTAGCCCTGGCCCTGGGG ATCCTGGGAGGCCTGGGGACAGCCGCCCTGCTCATTGGGGTCATCTTGTGGCAAAGGCGG CAACGCCGAGGAGAGGAGAGGAAGGCCCCAGAAAACCAGGAGGAAGAGGAGGAGCGTGCA GAACTGAATCAGTCGGAGGAACCTGAGGCAGGCGAGAGTAGTACTGGAGGGCCTTGA >chr6_cox_hap1_128|geneid_v1.2_predicted_protein_128|1379_AA MTLSGFIGPDCEVNPDNCVSHQCQNGGTCQDGLDTYTCLCPETWTGWDCSEDVDECEAQG PPHCRNGGTCQNSAGSFHCVCVSGWGGTSCEENLDDCIAATCAPGSTCIDRVGSFSCLCP PGRTGLLCHLEDMCLSQPCHGDAQCSTNPLTGSTLCLCQPGYSGPTCHQDLDECLMGLEG QLCEVETNECASAPCLNHADCHDLLNGFQCICLPGPTCSEEMTACHSGPCLNGGSCNPSP GGYYCTCPPSHTGPQCQTSTDYCVSGIDVSSLCHNGGLCVDSGPSYFCHCPPGFQGSLCQ DHVNPCESRPCQNGATCMAQPSGYLCQCAPGYDGQNCSKELDACQSQPCHNHGTCTPKPG GFHCACPPGFVGLRCEGDVDECLDQPCHPTGTAACHSLANAFYCQCLPGHTGQWCEVEID PCHSQPCFHGGTCEATAGSPLGFICHCPKASDHKSAFSVAPYADKARIPQLESQKGLWRK RKTYDPISKDPAYDQYCHDHFHNGHCEKGCNTAECGWDGGDCRPEDGDPEWGPSLALLVV LSPPALDQQLFALARVLSLTLRVGLWVRKDRDGRDMVYPYPGARAEEKLGGTRDPTYQER AAPQTQPLGKETDSLSAGALKPKAEVDEDGVVMCSGPEEGEELLLRSRQTAVDARTEDGT TPLMLAARLAVEDLVEELIAAQADVGARDKWGKTALHWAAAVNNARAARSLLQAGADKDA QDNREQTPLFLAAREGAVEVAQLLLGLGAARELRDQAGLAPADVAHQRNHWDLLTLLEGA GPPEARHKATPGREAGPFPRARTVSTELLLDLVAEAQSRRLEEQRATFYTPQNPSSLAPA PLRPLEDREQLYSTILSHQCQRMEAQRKHALNCHRMKPALFSVLCEIKEKTGLSIRSSQE EEPVDPQLMRLDNMLLAEGVAGPEKGGGSAAAAAAAAASGGGVSPDNSIEHSDYRSKLAQ IRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAPKEMERMVSIIHRKFSAIQMQLK QSTCEAVMILRSRFLDARRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGIT VSQVSNWFGNKRIRYKKNIGKFQEEANIYAVKTAVSVTQGGHSRTSSPTPPSSAGAVVGA QNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGS LFLPAVGIQDEGIFRCQAMNRNGKETKSNYRVRVYQIPGKPEIVDSASELTAGVPNKGVP LPLPPSPVLILPEIGPQDQGTYSCVATHSSHGPQESRAVSISIIGSVGGSGLGTLALALG ILGGLGTAALLIGVILWQRRQRRGEERKAPENQEEEEERAELNQSEEPEAGESSTGGP* # Gene 129 (Reverse). 16 exons. 792 aa. Score = 40.65 Terminal 3649267 3649344 -2.76 - 0 0 0.00 3.53 1.66 0.00 AA 767:792 chr6_cox_hap1_129 Internal 3668349 3669097 16.37 - 2 0 5.16 1.65 44.58 0.00 AA 517:766 chr6_cox_hap1_129 Internal 3698676 3698699 0.41 - 2 1 4.83 3.72 2.07 0.00 AA 509:517 chr6_cox_hap1_129 Internal 3705679 3705699 0.58 - 2 1 4.42 4.86 1.40 0.00 AA 502:509 chr6_cox_hap1_129 Internal 3710522 3710542 1.77 - 2 1 4.17 7.00 1.55 0.00 AA 495:502 chr6_cox_hap1_129 Internal 3710997 3711017 0.55 - 2 1 2.70 5.87 2.41 0.00 AA 488:495 chr6_cox_hap1_129 Internal 3724475 3724495 0.56 - 2 1 4.04 4.36 2.67 0.00 AA 481:488 chr6_cox_hap1_129 Internal 3729855 3729875 0.56 - 2 1 5.30 3.93 1.42 0.00 AA 474:481 chr6_cox_hap1_129 Internal 3740909 3740929 1.30 - 2 1 6.09 3.85 2.21 0.00 AA 467:474 chr6_cox_hap1_129 Internal 3742690 3742722 1.58 - 2 1 3.23 6.71 2.93 0.00 AA 456:467 chr6_cox_hap1_129 Internal 3769449 3769730 2.33 - 2 1 1.58 4.99 9.85 0.00 AA 362:456 chr6_cox_hap1_129 Internal 3770744 3771091 5.70 - 2 1 1.83 3.26 20.48 0.00 AA 246:362 chr6_cox_hap1_129 Internal 3776475 3776495 1.78 - 2 1 4.98 5.39 2.76 0.00 AA 239:246 chr6_cox_hap1_129 Internal 3777625 3777906 4.26 - 2 1 2.65 3.00 16.06 0.00 AA 145:239 chr6_cox_hap1_129 Internal 3779629 3779976 5.79 - 2 1 2.30 3.78 19.23 0.00 AA 29:145 chr6_cox_hap1_129 First 3781076 3781160 -0.13 - 0 1 1.22 4.29 5.29 0.00 AA 1: 29 chr6_cox_hap1_129 >chr6_cox_hap1_129|geneid_v1.2_predicted_cDNA_129|2376_NN ATGGCGAAGTGGGAAAAAACACGACACAGAGCATCAGAGGGCGCAGGCTCTGCCTCGGCA CCGCAGAGCTGGTGTGTCTGCCTCGAAGACTTTAGAGTCATTGGCCCTGCTCATCCTATC CTGGCCGGGGTTGGGGAAGATGCCCTGTTAACCTGCCAGCTACTCCCCAAGAGGACCACA ATGCACGTGGAGGTGAGGTGGTACCGCTCAGAGCCCAGCACACCTGTGTTTGTGCACAGG GATGGAGTGGAGGTGACTGAGATGCAGATGGAGGAGTACAGAGGCTGGGTAGAGTGGATA GAGAATGGCATTGCAAAGGGAAATGTGGCACTGAAGATACACAACATCCAGCCCTCCGAC AATGGACAATACTGGTGCCATTTCCAGGATGGGAACTACTGTGGAGAAACAAGCTTGCTG CTCAAAGTAGCAGGTCTGGGGTCTGCCCCTAGCATCCACATGGAGGGACCTGGGGAGAGT GGAGTCCAGCTTGTGTGCACTGCAAGGGGCTGGTTCCCAGAGCCCCAGGTGTATTGGGAA GACATCCGGGGAGAGAAGCTGCTGGCCGTGTCTGAGCATCGCATCCAAGATAAAGATGGC CTGTTCTATGCGGAAGCCACCCTGGTGGTCAGGAACGCCTCTGCAGAGTCTGTGTCCTGC TTGGTCCACAACCCCGTCCTCACTGAGGAGAAGGGGTCGGTCATCAGCCTCCCAGAGAAA CTCCAGACTGAGCTGGCTTCTTTAAAAGTGAATGGACCTTCCCAGCCCATCCTCGTCAGA GTGGGAGAAGATATACAGCTAACCTGTTACCTGTCCCCCAAGGCGAATGCACAGAGCATG GAGGTGAGGTGGGACCGATCCCACCGTTACCCTGCTGTGCATGTGTATATGGATGGGGAC CATGTGGCTGGAGAGCAGATGGCAGAGTACAGAGGGAGGACTGTACTGGTGAGTGACGCC ATTGACGAGGGCAGACTGACCCTGCAGATACTCAGTGCCAGACCTTCGGACGACGGGCAG TACCGCTGCCTTTTTGAAAAAGATGATGTCTACCAGGAGGCCAGTTTGGATCTGAAGGTG GTAAGTCTGGGTTCTTCCCCACTGATCACTGTGGAGGGGCAAGAAGATGGAGAAATGCAG CCGATGTGCTCTTCAGATGGGTGGTTCCCACAGCCCCACGTGCCATGGAGGGACATGGAA GGAAAGACGATACCATCATCTTCCCAGGCCCTGACTCAAGGCAGCCACGGGCTGTTCCAC GTGCAGACATTGCTAAGGGTCACAAACATCTCCGCTGTGGACGTCACTTGTTCCATCAGC ATCCCCTTTTTGGGCGAGGAGAAAATCGCAACTTTTTCTCTCTCAGGTGCTAGACTTCTG GACTATGAGGATGGTAGAGACACTTCATATGATAACCGAGCACCATCAACCAACTCTCTA GCACTGTCTCGATCAAGTATTGCCGGAGCTACAGGACCTTTCAAGCTCTCTCAAAAAACC ATTGTACAATATCCTGGATCCAATGCTGGTCCACCTTCAGCACCCCGCGTTATATTAACA GGTTACATGGATGAAGAACTTGCAAAAAAATCTTGTTCCAAAATCCAGATTCTAAAATGT GGAGGCACTGCAAGGTCTCAGAATAGCCGAGAAGAAAACAAGGAAGCACTAAAGAATGAC ATCATATTTACGAATTCTGTAGAATCCTTGAAATCAGCACACATAAAGGAGCCAGAAAGA GAAGGAAAAGGCACTGATTTAGAGAAAGACAAAATAGGAATGGAGGTCAAGGTAGACAGT GACGCTGGAATACCAAAAAGACAGGAAACCCAACTAAAAATCAGTGAGATGAGTGTACCA CAAGGACAGGGAGCCCAAATAAAGAAAAGTGTGTCAGATGTACCAAGAGGACAGGAGTCC CAAGTAAAGAAGAGTGAGTCAGGTGTCCCAAAAGGACAAGAAGCCCAAGTAACGAAGAGT GGGTTGGTTGTACTGAAAGGACAGGAAGCCCAGGTAGAGAAGAGTGAGATGGGTGTGCCA AGAAGACAGGAATCCCAAGTAAAGAAGAGTCAGTCTGGTGTCTCAAAGGGACAGGAAGCC CAGGTAAAGCAGAGGGAGTCAGTTGTACTGAAAGGACAGGAAGCCCAGGTAGAGAAGAGT GAGTTGAAGGTACCAAAAGGACAAGAAGGCCAAGTAGAGAAGACTGAGGCAGATGTGCCA AAGGAACAAGAGGTCCAAGAAAAGAAGAGTGAGGCAGGTGTACTGAAAGGACCAGAATCC CAAGTAAAGAACACTGAGAGAAGAATTGGGCTTACAACTATGAAACAAGACTACATCTTT AGGAGCTATTTCTTAATAGAATACAAAGCAGTTTAG >chr6_cox_hap1_129|geneid_v1.2_predicted_protein_129|792_AA MAKWEKTRHRASEGAGSASAPQSWCVCLEDFRVIGPAHPILAGVGEDALLTCQLLPKRTT MHVEVRWYRSEPSTPVFVHRDGVEVTEMQMEEYRGWVEWIENGIAKGNVALKIHNIQPSD NGQYWCHFQDGNYCGETSLLLKVAGLGSAPSIHMEGPGESGVQLVCTARGWFPEPQVYWE DIRGEKLLAVSEHRIQDKDGLFYAEATLVVRNASAESVSCLVHNPVLTEEKGSVISLPEK LQTELASLKVNGPSQPILVRVGEDIQLTCYLSPKANAQSMEVRWDRSHRYPAVHVYMDGD HVAGEQMAEYRGRTVLVSDAIDEGRLTLQILSARPSDDGQYRCLFEKDDVYQEASLDLKV VSLGSSPLITVEGQEDGEMQPMCSSDGWFPQPHVPWRDMEGKTIPSSSQALTQGSHGLFH VQTLLRVTNISAVDVTCSISIPFLGEEKIATFSLSGARLLDYEDGRDTSYDNRAPSTNSL ALSRSSIAGATGPFKLSQKTIVQYPGSNAGPPSAPRVILTGYMDEELAKKSCSKIQILKC GGTARSQNSREENKEALKNDIIFTNSVESLKSAHIKEPEREGKGTDLEKDKIGMEVKVDS DAGIPKRQETQLKISEMSVPQGQGAQIKKSVSDVPRGQESQVKKSESGVPKGQEAQVTKS GLVVLKGQEAQVEKSEMGVPRRQESQVKKSQSGVSKGQEAQVKQRESVVLKGQEAQVEKS ELKVPKGQEGQVEKTEADVPKEQEVQEKKSEAGVLKGPESQVKNTERRIGLTTMKQDYIF RSYFLIEYKAV* # Gene 130 (Forward). 4 exons. 255 aa. Score = 12.23 First 3814690 3814771 -0.70 + 0 1 0.57 4.12 5.09 0.00 AA 1: 28 chr6_cox_hap1_130 Internal 3817184 3817429 7.55 + 2 1 3.84 0.20 26.69 0.00 AA 28:110 chr6_cox_hap1_130 Internal 3817921 3818202 3.99 + 2 1 3.17 0.82 16.49 0.00 AA 110:204 chr6_cox_hap1_130 Terminal 3818492 3818646 1.39 + 2 0 4.82 0.00 10.12 0.00 AA 204:255 chr6_cox_hap1_130 >chr6_cox_hap1_130|geneid_v1.2_predicted_cDNA_130|765_NN ATGGCCATAAGTGGAGTCCCTGTGCTAGGATTTTTCATCATAGCTGTGCTGATGAGCGCT CAGGAATCATGGGCTATCAAAGAAGAACATGTGATCATCCAGGCCGAGTTCTATCTGAAT CCTGACCAATCAGGCGAGTTTATGTTTGACTTTGATGGTGATGAGATTTTCCATGTGGAT ATGGCAAAGAAGGAGACGGTCTGGCGGCTTGAAGAATTTGGACGATTTGCCAGCTTTGAG GCTCAAGGTGCATTGGCCAACATAGCTGTGGACAAAGCCAACCTGGAAATCATGACAAAG CGCTCCAACTATACTCCGATCACCAATGTACCTCCAGAGGTAACTGTGCTCACGAACAGC CCTGTGGAACTGAGAGAGCCCAACGTCCTCATCTGTTTCATAGACAAGTTCACCCCACCA GTGGTCAATGTCACGTGGCTTCGAAATGGAAAACCTGTCACCACAGGAGTGTCAGAGACA GTCTTCCTGCCCAGGGAAGACCACCTTTTCCGCAAGTTCCACTATCTCCCCTTCCTGCCC TCAACTGAGGACGTTTACGACTGCAGGGTGGAGCACTGGGGCTTGGATGAGCCTCTTCTC AAGCACTGGGAGTTTGATGCTCCAAGCCCTCTCCCAGAGACTACAGAGAACGTGGTGTGT GCCCTGGGCCTGACTGTGGGTCTGGTGGGCATCATTATTGGGACCATCTTCATCATCAAG GGATTGCGCAAAAGCAATGCAGCAGAACGCAGGGGGCCTCTGTAA >chr6_cox_hap1_130|geneid_v1.2_predicted_protein_130|255_AA MAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVD MAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNS PVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLP STEDVYDCRVEHWGLDEPLLKHWEFDAPSPLPETTENVVCALGLTVGLVGIIIGTIFIIK GLRKSNAAERRGPL* # Gene 131 (Reverse). 8 exons. 536 aa. Score = 14.07 Terminal 3819565 3819611 -3.56 - 2 0 0.00 2.87 0.65 0.00 AA 521:536 chr6_cox_hap1_131 Internal 3834513 3834820 5.27 - 1 1 4.07 2.25 16.19 0.00 AA 418:521 chr6_cox_hap1_131 Internal 3847923 3848234 0.33 - 1 2 -0.46 3.96 9.46 0.00 AA 314:418 chr6_cox_hap1_131 Internal 3859689 3859981 -0.37 - 0 2 2.22 5.19 1.82 0.00 AA 217:314 chr6_cox_hap1_131 Internal 3871764 3871787 1.27 - 0 0 2.14 6.53 2.68 0.00 AA 209:216 chr6_cox_hap1_131 Internal 3873084 3873337 1.57 - 2 0 -0.26 4.84 9.56 0.00 AA 124:208 chr6_cox_hap1_131 Internal 3875612 3875881 10.39 - 2 1 4.07 3.34 27.36 0.00 AA 34:124 chr6_cox_hap1_131 First 3883563 3883662 -0.82 - 0 1 2.36 0.29 7.84 0.00 AA 1: 34 chr6_cox_hap1_131 >chr6_cox_hap1_131|geneid_v1.2_predicted_cDNA_131|1608_NN ATGGTGTGTCTGAAGCTCCCTGGAGGCTCCAGCTTGGCAGCGTTGACAGTGACACTGATG GTGCTGAGCTCCCGACTGGCTTTCGCTGGGGACACCCGACCACGTTTCTTGGAGCTGCGT AAGTCTGAGTGTCATTTCTTCAATGGGACGGAGCGGGTGCGGTACCTGGACAGATACTTC CATAACCAGGAGGAGTTCCTGCGCTTCGACAGCGACGTGGGGGAGTACCGGGCGGTGACG GAGCTGGGGCGGCCTGTCGCCGAGTCCTGGAACAGCCAGAAGGACCTCCTGGAGCAGAAG CGGGGCCGGGTGGACAATTACTGCAGACACAACTACGGGGTTGGTGAGAGCTTCACAGTG CAGCGGCGAGTCCATCCTCAGGTGACTGTGTATCCTGCAAAGACCCAGCCCCTGCAGCAC CACAACCTCCTGGTCTGCTCTGTGAGTGGTTTCTATCCAGGCAGCATTGAAGTCAGGTGG TTCCGGAACGGCCAGGAAGAGAAGGCTGGGGTGGTGTCCACGGGCCTGATCCAGAATGGA GACTGGACCTTCCAGACCCTGGTGATGCTAGAAACAGTTCCTCGGAGTGGAGAGGTTTAC ACTTGCCAAGTGGAGCACCCAAGCGACACTCTGGACTTCAGCCAACAGGACCTGTGGTGT TGGCCCCTCTTCCTCATAAGTGAAGATGTACCCAGTGGCCTCCCCATTATCTACTTTCGT TTCTTTCTGAAGTCCAGTCTTTATAAAGCCTGTATCCCTGTAGCTTATGTAGGTTCTCTG ACAAAAGTTATACTTAGTGCTCTTTCTTTCTTATGGGGAAAAATCCGTGGAGCTGAAGCC AAGATCTTTAGTACTTGGTATCACCCTACAGACAAAGAACATCTATGGGGTGTTCTTTGG TGCCTAAAGAACTTAAGGCATCCTCTGAAAACCTGGCCCAGCATGGTGTGTCTGAAGCTC CCTGGAGGCTCCTGCATGGCAGCGCTGACAGTGACACTGATGGTGCTGAGCTTCCCACTG GCTTTGGCTGGGGACACCCGACATAAGCGCACATTGTGGGTGCTGAGCTACTATGGGGTG GGGAAAATAGGGAGTTTTGTTAACATTGTGCCCAGGCCATGTCCCTTAAGACTTTGTGAC GTTTTGGTCAGAGATTGTGCATCTGTATTATTGGATCCCAAATTATCTCCTCCACGAAAG GAGCTTGACTACTTGCTCATGACACAGTCCATGAGACTGTGTAAGGGGCCTTCGATGCCG CCCAAGAAACCGGTTCTTCATGTCCCTGCGGCACATTTCTTGGAGCAGATTAAACACGAG TGCTATTTCTGCAATGGGACAGAGCGGATGCGGTTTGTGCAGAGACTCATCCACACCGGA AGGAGTATGCGCGCTTCCATAGGGACGTCGGAAAGTTCCGGGCGGTGGCGGAGCTGGAGC GGAGAAGAGTCCAGGAATGCAAACAGCCAGAAGAACCTCTTGGGCTGCTTGCGGGGTCTG TTGGACACCTACTGCAGACACAACTACGGGGTTTTTGAGAGCTTCTCCATGCACAGGCGA GAGGCATTGCATGGTGATAATAAAATGATAGGAAATAGAGGAAAATAG >chr6_cox_hap1_131|geneid_v1.2_predicted_protein_131|536_AA MVCLKLPGGSSLAALTVTLMVLSSRLAFAGDTRPRFLELRKSECHFFNGTERVRYLDRYF HNQEEFLRFDSDVGEYRAVTELGRPVAESWNSQKDLLEQKRGRVDNYCRHNYGVGESFTV QRRVHPQVTVYPAKTQPLQHHNLLVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNG DWTFQTLVMLETVPRSGEVYTCQVEHPSDTLDFSQQDLWCWPLFLISEDVPSGLPIIYFR FFLKSSLYKACIPVAYVGSLTKVILSALSFLWGKIRGAEAKIFSTWYHPTDKEHLWGVLW CLKNLRHPLKTWPSMVCLKLPGGSCMAALTVTLMVLSFPLALAGDTRHKRTLWVLSYYGV GKIGSFVNIVPRPCPLRLCDVLVRDCASVLLDPKLSPPRKELDYLLMTQSMRLCKGPSMP PKKPVLHVPAAHFLEQIKHECYFCNGTERMRFVQRLIHTGRSMRASIGTSESSGRWRSWS GEESRNANSQKNLLGCLRGLLDTYCRHNYGVFESFSMHRREALHGDNKMIGNRGK* # Gene 132 (Reverse). 2 exons. 94 aa. Score = 3.24 Terminal 3909238 3909437 2.37 - 2 0 0.00 6.71 9.75 0.00 AA 28: 94 chr6_cox_hap1_132 First 3910158 3910239 0.86 - 0 1 3.69 2.37 5.57 0.00 AA 1: 28 chr6_cox_hap1_132 >chr6_cox_hap1_132|geneid_v1.2_predicted_cDNA_132|282_NN ATGCTGAGTGGAGTCGGGGGCTTCGTGCTGGGCCTGCTCTTCCTTGGGACGGGGCTGTTC ATCTACTTCAAGAATCAGAAAGTGCTCTCATCTGAGTCGTTGAAAGCGGGGAAAAGAAGT TTTAGTAAAGCCAGGTCTGAAAACAATTTCCTCTGTCTCCGCAGGACTCGAGCTGAAGTG CAGATGACCACATTCAAGGAAGAACCTTCTGCCCCAGCTTTGCAGGATGAAAAGCTTTCC CACTTGGCTGTTATTCTTCCACAAGAGCTTTGTCAGGACTAG >chr6_cox_hap1_132|geneid_v1.2_predicted_protein_132|94_AA MLSGVGGFVLGLLFLGTGLFIYFKNQKVLSSESLKAGKRSFSKARSENNFLCLRRTRAEV QMTTFKEEPSAPALQDEKLSHLAVILPQELCQD* # Gene 133 (Reverse). 5 exons. 343 aa. Score = 14.48 Terminal 3911095 3911360 1.95 - 2 0 0.00 4.27 10.97 0.00 AA 255:343 chr6_cox_hap1_133 Internal 3936282 3936392 0.23 - 2 1 3.69 2.78 3.37 0.00 AA 218:255 chr6_cox_hap1_133 Internal 3937091 3937372 1.95 - 2 1 0.30 4.43 10.29 0.00 AA 124:218 chr6_cox_hap1_133 Internal 3939603 3939872 12.28 - 2 1 4.72 3.56 30.78 0.00 AA 34:124 chr6_cox_hap1_133 First 3947867 3947966 -1.94 - 0 1 3.64 0.29 3.14 0.00 AA 1: 34 chr6_cox_hap1_133 >chr6_cox_hap1_133|geneid_v1.2_predicted_cDNA_133|1029_NN ATGGTGTGTCTGAGGCTCCCTGGAGGCTCCTGCATGGCAGTTCTGACAGTGACACTGATG GTGCTGAGCTCCCCACTGGCTTTGGCTGGGGACACCAGACCACGTTTCTTGGAGTACTCT ACGTCTGAGTGTCATTTCTTCAATGGGACGGAGCGGGTGCGGTACCTGGACAGATACTTC CATAACCAGGAGGAGAACGTGCGCTTCGACAGCGACGTGGGGGAGTTCCGGGCGGTGACG GAGCTGGGGCGGCCTGATGCCGAGTACTGGAACAGCCAGAAGGACCTCCTGGAGCAGAAG CGGGGCCGGGTGGACAACTACTGCAGACACAACTACGGGGTTGTGGAGAGCTTCACAGTG CAGCGGCGAGTCCATCCTAAGGTGACTGTGTATCCTTCAAAGACCCAGCCCCTGCAGCAC CATAACCTCCTGGTCTGTTCTGTGAGTGGTTTCTATCCAGGCAGCATTGAAGTCAGGTGG TTCCGGAATGGCCAGGAAGAGAAGACTGGGGTGGTGTCCACAGGCCTGATCCACAATGGA GACTGGACCTTCCAGACCCTGGTGATGCTGGAAACAGTTCCTCGGAGTGGAGAGGTTTAC ACCTGCCAAGTGGAGCACCCAAGCGTGACAAGCCCTCTCACAGTGGAATGGAGAGCACGG TCTGAATCTGCACAGAGCAAGATGCTGAGTGGAGTCGGGGGCTTTGTGCTGGGCCTGCTC TTCCTTGGGGCCGGGCTGTTCATCTACTTCAGGAATCAGAAAGTCCAACCTAAGGGGACT ATGTATCCTGCAAAGACCCAGCCCCTGCCTCACAGCAACCTCCTGGTCTGCTGTGTGAGT GGTTTCTATCCAGGCAGCATTGAAGTCAGGTGGTTCCGGAATGGTCAGGAAGAGAAGGCT GCGGTGGTCTCCATAGGCCTGATCCAGAATGGAGACTGGACTTTCCAGACCCTGGTGATG CTGGAAACAGTTCCTCGGAGTGGAGGAGCATCCAAGCATGACGAGCCCTCTCACAGTGCA ATGGAGTGA >chr6_cox_hap1_133|geneid_v1.2_predicted_protein_133|343_AA MVCLRLPGGSCMAVLTVTLMVLSSPLALAGDTRPRFLEYSTSECHFFNGTERVRYLDRYF HNQEENVRFDSDVGEFRAVTELGRPDAEYWNSQKDLLEQKRGRVDNYCRHNYGVVESFTV QRRVHPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFRNGQEEKTGVVSTGLIHNG DWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRARSESAQSKMLSGVGGFVLGLL FLGAGLFIYFRNQKVQPKGTMYPAKTQPLPHSNLLVCCVSGFYPGSIEVRWFRNGQEEKA AVVSIGLIQNGDWTFQTLVMLETVPRSGGASKHDEPSHSAME* # Gene 134 (Forward). 4 exons. 307 aa. Score = 6.48 First 3992131 3992212 -0.67 + 0 1 -0.09 4.05 6.24 0.00 AA 1: 28 chr6_cox_hap1_134 Internal 3996032 3996277 2.83 + 2 1 1.86 2.58 14.29 0.00 AA 28:110 chr6_cox_hap1_134 Internal 3996690 3996971 3.05 + 2 1 2.11 2.45 13.30 0.00 AA 110:204 chr6_cox_hap1_134 Terminal 4007453 4007763 1.27 + 2 0 5.59 0.00 8.67 0.00 AA 204:307 chr6_cox_hap1_134 >chr6_cox_hap1_134|geneid_v1.2_predicted_cDNA_134|921_NN ATGATCCTAAACAAAGCTCTGATGCTGGGGGCCCTTGCCCTGACCACCGTGATGAGCCCC TGTGGAGGTGAAGACATTGTGGCTGACCACGTCGCCTCTTATGGTGTAAACTTGTACCAG TCTTACGGTCCCTCTGGCCAGTACACCCATGAATTTGATGGAGATGAGCAGTTCTACGTG GACCTGGGGAGGAAGGAGACTGTCTGGTGTTTGCCTGTTCTCAGACAATTTAGATTTGAC CCGCAATTTGCACTGACAAACATCGCTGTCCTAAAACATAACTTGAACAGTCTGATTAAA CGCTCCAACTCTACCGCTGCTACCAATGAGGTTCCTGAGGTCACAGTGTTTTCCAAGTCT CCCGTGACACTGGGTCAGCCCAACATCCTCATCTGTCTTGTGGACAACATCTTTCCTCCT GTGGTCAACATCACATGGCTGAGCAATGGGCACTCAGTCACAGAAGGTGTTTCTGAGACC AGCTTCCTCTCCAAGAGTGATCATTCCTTCTTCAAGATCAGTTACCTCACCCTCCTCCCT TCTGCTGAGGAGAGTTATGACTGCAAGGTGGAGCACTGGGGCCTGGACAAGCCTCTTCTG AAACACTGGGGGCCAAAAGCCAGGAGCTACACACAGAGACTGAGGACACGCTGGACAACC CAGCACATGCCTTCCCCATTTCCCCAAAAGTGTTACTCCCTTTTGATCCCTATGGTGAAT GACAGTGCCCACCCTGAGGAAGAGGACAAAATCGGCACAAAACTTTTGACTCCATTCAGA ATTTTGCTTGGGGAAAATTCAGACTATAACCCTGGGGAGCAGAATCTCAAGTGTTGGTGC CTCTTTGTGCGCCAGTGTCCCTGTCTGAGGACCTGCATGACAGCCTGGAGTACAGGAGAT GAAGGTCCCAAGGAGACCTAG >chr6_cox_hap1_134|geneid_v1.2_predicted_protein_134|307_AA MILNKALMLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYV DLGRKETVWCLPVLRQFRFDPQFALTNIAVLKHNLNSLIKRSNSTAATNEVPEVTVFSKS PVTLGQPNILICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTLLP SAEESYDCKVEHWGLDKPLLKHWGPKARSYTQRLRTRWTTQHMPSPFPQKCYSLLIPMVN DSAHPEEEDKIGTKLLTPFRILLGENSDYNPGEQNLKCWCLFVRQCPCLRTCMTAWSTGD EGPKET* # Gene 135 (Reverse). 5 exons. 302 aa. Score = 17.96 Terminal 4011280 4011653 3.54 - 2 0 0.00 2.48 19.00 0.00 AA 178:302 chr6_cox_hap1_135 Internal 4014543 4014812 12.77 - 2 1 4.72 1.61 34.94 0.00 AA 88:178 chr6_cox_hap1_135 Internal 4016251 4016419 4.46 - 0 1 4.82 3.58 12.44 0.00 AA 32: 88 chr6_cox_hap1_135 Internal 4018466 4018485 -1.40 - 2 0 3.65 2.60 0.99 0.00 AA 25: 31 chr6_cox_hap1_135 First 4050170 4050242 -1.41 - 0 1 4.38 1.23 1.95 0.00 AA 1: 25 chr6_cox_hap1_135 >chr6_cox_hap1_135|geneid_v1.2_predicted_cDNA_135|906_NN ATGGCTGGAGCAGGAGTTAAAGTCTGCTTTTGTTTGAGAACTGAGGAGCTCAGTCTTTTA CATGCTCTCACAGAGGCTGGGCAGGCGATTCAGGTACATCAGATCCATCAGGTCCGAGCT GTGTTGACTACCACTTTTCCCTTCGTCTCAATTATGTCTTGGAAAAAGGCTTTGCGGATC CCCGGAGGCCTTCGGGCAGCAACTGTGACCTTGATGCTGTCGATGCTGAGCACCCCAGTG GCTGAGGGCAGAGACTCTCCCGAGGATTTCGTGTACCAGTTTAAGGGCATGTGCTACTTC ACCAACGGGACAGAGCGCGTGCGTCTTGTGAGCAGAAGCATCTATAACCGAGAAGAGATC GTGCGCTTCGACAGCGACGTGGGGGAGTTCCGGGCGGTGACGCTGCTGGGGCTGCCTGCC GCCGAGTACTGGAACAGCCAGAAGGACATCCTGGAGAGGAAACGGGCGGCGGTGGACAGG GTGTGCAGACACAACTACCAGTTGGAGCTCCGCACGACCTTGCAGCGGCGAGTGGAGCCC ACAGTGACCATCTCCCCATCCAGGACAGAGGCCCTCAACCACCACAACCTGCTGGTCTGC TCGGTGACAGATTTCTATCCAGCCCAGATCAAAGTCCGGTGGTTTCGGAATGACCAGGAG GAGACAGCTGGCGTTGTGTCCACCCCCCTTATTAGGAATGGTGACTGGACCTTCCAGATC CTGGTGATGCTGGAAATGACTCCCCAGCGTGGAGACGTCTACACCTGCCACGTGGAGCAC CCCAGCCTCCAGAGCCCCATCACCGTGGAGTGGCGTAAGGGGATATTGAGTTTCTGTTAC TGTGGGCCCCACAAGACAAAGGACAGAGCTCCTTCTGACCCATCCCTTCCCATCTCTTAT CCCTGA >chr6_cox_hap1_135|geneid_v1.2_predicted_protein_135|302_AA MAGAGVKVCFCLRTEELSLLHALTEAGQAIQVHQIHQVRAVLTTTFPFVSIMSWKKALRI PGGLRAATVTLMLSMLSTPVAEGRDSPEDFVYQFKGMCYFTNGTERVRLVSRSIYNREEI VRFDSDVGEFRAVTLLGLPAAEYWNSQKDILERKRAAVDRVCRHNYQLELRTTLQRRVEP TVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRWFRNDQEETAGVVSTPLIRNGDWTFQI LVMLEMTPQRGDVYTCHVEHPSLQSPITVEWRKGILSFCYCGPHKTKDRAPSDPSLPISY P* # Gene 136 (Forward). 1 exons. 97 aa. Score = 1.20 Single 4077108 4077398 1.20 + 0 0 1.37 0.00 14.81 0.00 AA 1: 97 chr6_cox_hap1_136 >chr6_cox_hap1_136|geneid_v1.2_predicted_cDNA_136|291_NN ATGGGTGACACAGCTGGCAGAAATGGCCTGCTCACAGGCCTGACAGAAGAGGAGCTGGGA ATTACAGACAAGAGTAAAGCCAAGACAAGACAAGAAAGAGGTGACAGATCCCAGAAAGAA AAATGTTTGCAGTCAATGCGTGAGCCCTCTAAGAGACAGAAGAAACAATCACATGTCACA CCAACCCCTGAAGAAACACAGTCCCTCCCTCCCTTGGGGCCTCTCTGCAGTTGTCAGGAC ACTAAGGTTGAGCTTATGTCAACACCTGCTCCTCGTTACCTTTCCTGGTAA >chr6_cox_hap1_136|geneid_v1.2_predicted_protein_136|97_AA MGDTAGRNGLLTGLTEEELGITDKSKAKTRQERGDRSQKEKCLQSMREPSKRQKKQSHVT PTPEETQSLPPLGPLCSCQDTKVELMSTPAPRYLSW* # Gene 137 (Forward). 3 exons. 216 aa. Score = 6.53 First 4091449 4091530 0.06 + 0 1 0.98 4.05 6.48 0.00 AA 1: 28 chr6_cox_hap1_137 Internal 4095165 4095413 3.26 + 2 1 1.29 2.58 16.22 0.00 AA 28:111 chr6_cox_hap1_137 Terminal 4095797 4096113 3.20 + 2 0 2.11 0.00 17.34 0.00 AA 111:216 chr6_cox_hap1_137 >chr6_cox_hap1_137|geneid_v1.2_predicted_cDNA_137|648_NN ATGATCCTAAACAAAGCTCTGCTGCTGGGGGCCCTCGCCCTGACTGCCGTGATGAGCCCC TGTGGAGGTGAAGACATTGTGGCTGACCATGTTGCCTCCTATGGTGTGAACTTCTACCAG TCTCACGGTCCCTCTGGCCAGTACACCCATGAATTTGATGGAGACGAGGAGTTCTATGTG GACCTGGAGACGAAAGAGACTGTCTGGCAGTTGCCTATGTTTAGCAAATTTATAAGTTTT GACCCGCAGAGTGCACTGAGAAATATGGCTGTGGGAAAACACACCTTGGAATTCATGATG AGACAGTCCAACTCTACCGCTGCCACCAATGAGGTTCCTGAGGTCACAGTGTTTTCCAAG TTTCCTGTGACGCTGGGTCAGCCCAACACCCTCATCTGTCTTGTGGACAACATCTTTCCT CCTGTGGTCAACATCACCTGGCTGAGCAATGGGCACTCAGTCACAGAAGGTGTTTCTGAG ACCAGCTTCCTCTCCAAGAGTGATCATTCCTTCTTCAAGATCAGTTACCTCACCTTCCTC CCTTCTGCTGATGAGATTTATGACTGCAAGGTGGAGCACTGGGGCCTGGACGAGCCTCTT CTGAAACACTGGGGTAAGGATGAGTTCCACTACTTCATGGGTTTCTAA >chr6_cox_hap1_137|geneid_v1.2_predicted_protein_137|216_AA MILNKALLLGALALTAVMSPCGGEDIVADHVASYGVNFYQSHGPSGQYTHEFDGDEEFYV DLETKETVWQLPMFSKFISFDPQSALRNMAVGKHTLEFMMRQSNSTAATNEVPEVTVFSK FPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFL PSADEIYDCKVEHWGLDEPLLKHWGKDEFHYFMGF* # Gene 138 (Reverse). 4 exons. 222 aa. Score = 18.99 Terminal 4106166 4106185 -1.47 - 2 0 0.00 5.49 0.58 0.00 AA 216:222 chr6_cox_hap1_138 Internal 4108857 4109138 3.80 - 2 1 1.12 2.48 17.96 0.00 AA 122:216 chr6_cox_hap1_138 Internal 4111667 4111933 15.84 - 2 1 4.53 3.54 39.99 0.00 AA 33:122 chr6_cox_hap1_138 First 4113381 4113477 0.83 - 0 1 2.16 2.92 8.33 0.00 AA 1: 33 chr6_cox_hap1_138 >chr6_cox_hap1_138|geneid_v1.2_predicted_cDNA_138|666_NN ATGGCTCTGCAGATCCCTGGAGGCTTTTGGGCAGCAGCTGTGACCGTGATGCTGGTGATG CTGAGCACCCCAGTGGCTGAGGCCAGAGACTTTCCCAAGGATTTCTTGGTCCAGTTTAAG GGCATGTGCTACTTCACCAACGGGACAGAGCGCGTGCGCGGTGTGGCCAGATACATCTAT AACCGCGAGGAGTACGGGCGCTTCGACAGCGACGTTGGGGAGTTCCAGGCGGTGACCGAG CTGGGGCGGAGCATCGAGGACTGGAACAACTATAAGGACTTCTTGGAGCAGGAGCGGGCC GCGGTGGACAAGGTGTGCAGACACAACTACGAGGCGGAGCTGCGCACGACCTTGCAGCGG CAAGTGGAGCCCACAGTGACCATCTCCCCATCCAGGACAGAGGCCCTCAACCACCACAAC CTGCTGGTCTGCTCAGTGACAGATTTCTATCCAGCCCAGATCAAAGTCCGGTGGTTTCGG AATGACCAGGAGGAGACAGCCGGTGTTGTGTCCACCTCCCTCATTAGGAATGGTGACTGG ACCTTCCAGATTCTGGTGATGCTGGAAATAACTCCCCAGCGTGGAGACATCTACACCTGC CAAGTGGAGCACCCCAGCCTCCAGAGCCCCATCACCGTGGAGTGGCACCTGTCAAGAGAA GCATGA >chr6_cox_hap1_138|geneid_v1.2_predicted_protein_138|222_AA MALQIPGGFWAAAVTVMLVMLSTPVAEARDFPKDFLVQFKGMCYFTNGTERVRGVARYIY NREEYGRFDSDVGEFQAVTELGRSIEDWNNYKDFLEQERAAVDKVCRHNYEAELRTTLQR QVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRWFRNDQEETAGVVSTSLIRNGDW TFQILVMLEITPQRGDIYTCQVEHPSLQSPITVEWHLSREA* # Gene 139 (Reverse). 14 exons. 901 aa. Score = 38.23 Terminal 4144809 4144939 0.76 - 2 0 0.00 4.20 9.47 0.00 AA 858:901 chr6_cox_hap1_139 Internal 4162954 4163235 2.71 - 2 1 0.34 4.79 11.59 0.00 AA 764:858 chr6_cox_hap1_139 Internal 4163678 4163947 4.90 - 2 1 3.64 2.22 17.32 0.00 AA 674:764 chr6_cox_hap1_139 Internal 4165495 4165586 1.45 - 1 1 4.61 5.37 2.52 0.00 AA 643:674 chr6_cox_hap1_139 Internal 4170772 4170952 3.27 - 2 2 3.21 6.14 8.02 0.00 AA 583:643 chr6_cox_hap1_139 Internal 4178029 4178169 0.63 - 2 1 -0.30 1.80 11.83 0.00 AA 536:583 chr6_cox_hap1_139 Internal 4178563 4178722 2.24 - 0 1 0.82 3.45 11.69 0.00 AA 483:536 chr6_cox_hap1_139 Internal 4178900 4179073 3.59 - 0 0 2.75 4.88 10.02 0.00 AA 425:482 chr6_cox_hap1_139 Internal 4180966 4181094 3.89 - 0 0 4.50 7.26 4.59 0.00 AA 382:424 chr6_cox_hap1_139 Internal 4181260 4181457 5.05 - 0 0 2.62 3.96 15.25 0.00 AA 316:381 chr6_cox_hap1_139 Internal 4183787 4183992 5.52 - 2 0 4.50 4.33 13.06 0.00 AA 247:315 chr6_cox_hap1_139 Internal 4184275 4184405 2.47 - 1 1 1.39 4.81 9.39 0.00 AA 203:247 chr6_cox_hap1_139 Internal 4186169 4186283 2.63 - 2 2 4.08 5.86 4.17 0.00 AA 165:203 chr6_cox_hap1_139 First 4186373 4186865 -0.88 - 0 1 3.62 4.19 -1.40 0.00 AA 1:165 chr6_cox_hap1_139 >chr6_cox_hap1_139|geneid_v1.2_predicted_cDNA_139|2703_NN ATGCGGCTCCCTGACCTGAGACCCTGGACCTCCCTGCTGCTGGTGGACGCGGCTTTACTG TGGCTGCTTCAGGGCCCTCTGGGGACTTTGCTTCCTCAAGGGCTGCCAGGACTATGGCTG GAGGGGACCCTGCGGCTGGGAGGGCTGTGGGGGCTGCTAAAGCTAAGAGGGCTGCTGGGA TTTGTGGGGACACTGCTGCTCCCGCTCTGTCTGGCCACCCCCCTGACTGTCTCCCTGAGA GCCCTGGTCGCGGGGGCCTCACGTGCTCCCCCAGCCAGAGTCGCTTCAGCCCCTTGGAGC TGGCTGCTGGTGGGGTACGGGGCTGCGGGGCTCAGCTGGTCACTGTGGGCTGTTCTGAGC CCTCCTGGAGCCCAGGAGAAGGAGCAGGACCAGGTGAACAACAAAGTCTTGATGTGGAGG CTGCTGAAGCTCTCCAGGCCGGACCTGCCTCTCCTCGTTGCCGCCTTCTTCTTCCTTGTC CTTGCTGTTTTGGGTGAGACATTAATCCCTCACTATTCTGGTCGTGTGATTGACATCCTG GGAGGTGATTTTGACCCCCATGCCTTTGCCAGTGCCATCTTCTTCATGTGCCTCTTCTCC TTTGGCAGCTCACTGTCTGCAGGCTGCCGAGGAGGCTGCTTCACCTACACCATGTCTCGA ATCAACTTGCGGATCCGGGAGCAGCTTTTCTCCTCCCTGCTGCGCCAGGACCTCGGTTTC TTCCAGGAGACTAAGACAGGGGAGCTGAACTCACGGCTGAGCTCGGATACCACCCTGATG AGTAACTGGCTTCCTTTAAATGCCAATGTGCTCTTGCGAAGCCTGGTGAAAGTGGTGGGG CTGTATGGCTTCATGCTCAGCATATCGCCTCGACTCACCCTCCTTTCTCTGCTGCACATG CCCTTCACAATAGCAGCGGAGAAGGTGTACAACACCCGCCATCAGGAAGTGCTTCGGGAG ATCCAGGATGCAGTGGCCAGGGCGGGGCAGGTGGTGCGGGAAGCCGTTGGAGGGCTGCAG ACCGTTCGCAGTTTTGGGGCCGAGGAGCATGAAGTCTGTCGCTATAAAGAGGCCCTTGAA CAATGTCGGCAGCTGTATTGGCGGAGAGACCTGGAACGCGCCTTGTACCTGCTCGTAAGG AGGGTGCTGCACTTGGGGGTGCAGATGCTGATGCTGAGCTGTGGGCTGCAGCAGATGCAG GATGGGGAGCTCACCCAGGGCAGCCTGCTTTCCTTTATGATCTACCAGGAGAGCGTGGGG AGCTATGTGCAGGGGCTGACGTTTACCCTACGTCCTGGTGAGGTGACGGCGCTGGTGGGA CCCAATGGGTCTGGGAAGAGCACAGTGGCTGCCCTGCTGCAGAATCTGTACCAGCCCACA GGGGGACAGGTGCTGCTGGATGAAAAGCCCATCTCACAGTATGAACACTGCTACCTGCAC AGCCAGGTGGTTTCAGTTGGGCAGGAGCCTGTGCTGTTCTCCGGTTCTGTGAGGAACAAC ATTGCTTATGGGCTGCAGAGCTGCGAAGATGATAAGGTGATGGCGGCTGCCCAGGCTGCC CACGCAGATGACTTCATCCAGGAAATGGAGCATGGAATATACACAGATGTAGGGGAGAAG GGAAGCCAGCTGGCTGCGGGACAGAAACAACGTCTGGCCATTGCCCGGGCCCTTGTACGA GACCCGCGGGTCCTCATCCTGGATGAGGCTACTAGTGCCCTAGATGTGCAGTGCGAGCAG GCCGTGAAAAACCCTTTGGAAGTTCATGATATTTTGAATTTCAATGGATATTTCCTGGGA ATAATGAGTTCAAATGAACGAATATGTGGAACAAAGCATCACCAACATTTATTTTTTCAG GATGAGGTGATGGACAAAACCATCACAGGGAAATTGAGGCAAATAGTACATGTAAAACAA TACTTCGGAATGGGTTCTGGGTGGGTCCCCTGGGTGGTGGCTCTGCTAGTGAATCTGACC CGACTGGATTCCTCCATGACTCAAGGCACAGACTCTCCAGAAGACTTTGTGATTCAGGCA AAGGCTGACTGTTACTTCACCAACGGGACAGAAAAGGTGCAGTTTGTGGTCAGATTCATC TTTAACTTGGAGGAGTATGTACGTTTCGACAGTGATGTGGGGATGTTTGTGGCATTGACC AAGCTGGGGCAGCCAGATGCTGAGCAGTGGAACAGCCGGCTGGATCTCTTGGAGAGGAGC AGACAGGCCGTGGATGGGGTCTGTAGACACAACTACAGGCTGGGCGCACCCTTCACTGTG GGGAGAAAAGTGCAACCAGAGGTGACAGTGTACCCAGAGAGGACCCCACTCCTGCACCAG CATAATCTGCTGCACTGCTCTGTGACAGGCTTCTATCCAGGGGATATCAAGATCAAGTGG TTCCTGAATGGGCAGGAGGAGAGAGCTGGGGTCATGTCCACTGGCCCTATCAGGAATGGA GACTGGACCTTTCAGACTGTGGTGATGCTAGAAATGACTCCTGAACTTGGACATGTCTAC ACCTGCCTTGTCGATCACTCCAGCCTGCTGAGCCCTGTTTCTGTGGAGTGGAGTAATCCT CTTACTCTGGGCTATGAACTTGCTACTGCCAAGATGGATGCCATGAAAAAAAGAGATCTC ATCAAAATGGTCAGAGAGATGGAGGGCCTCTGTGTAGATGGCAGGGTGGTGGTGGCCGTG TAA >chr6_cox_hap1_139|geneid_v1.2_predicted_protein_139|901_AA MRLPDLRPWTSLLLVDAALLWLLQGPLGTLLPQGLPGLWLEGTLRLGGLWGLLKLRGLLG FVGTLLLPLCLATPLTVSLRALVAGASRAPPARVASAPWSWLLVGYGAAGLSWSLWAVLS PPGAQEKEQDQVNNKVLMWRLLKLSRPDLPLLVAAFFFLVLAVLGETLIPHYSGRVIDIL GGDFDPHAFASAIFFMCLFSFGSSLSAGCRGGCFTYTMSRINLRIREQLFSSLLRQDLGF FQETKTGELNSRLSSDTTLMSNWLPLNANVLLRSLVKVVGLYGFMLSISPRLTLLSLLHM PFTIAAEKVYNTRHQEVLREIQDAVARAGQVVREAVGGLQTVRSFGAEEHEVCRYKEALE QCRQLYWRRDLERALYLLVRRVLHLGVQMLMLSCGLQQMQDGELTQGSLLSFMIYQESVG SYVQGLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQVLLDEKPISQYEHCYLH SQVVSVGQEPVLFSGSVRNNIAYGLQSCEDDKVMAAAQAAHADDFIQEMEHGIYTDVGEK GSQLAAGQKQRLAIARALVRDPRVLILDEATSALDVQCEQAVKNPLEVHDILNFNGYFLG IMSSNERICGTKHHQHLFFQDEVMDKTITGKLRQIVHVKQYFGMGSGWVPWVVALLVNLT RLDSSMTQGTDSPEDFVIQAKADCYFTNGTEKVQFVVRFIFNLEEYVRFDSDVGMFVALT KLGQPDAEQWNSRLDLLERSRQAVDGVCRHNYRLGAPFTVGRKVQPEVTVYPERTPLLHQ HNLLHCSVTGFYPGDIKIKWFLNGQEERAGVMSTGPIRNGDWTFQTVVMLEMTPELGHVY TCLVDHSSLLSPVSVEWSNPLTLGYELATAKMDAMKKRDLIKMVREMEGLCVDGRVVVAV * # Gene 140 (Reverse). 6 exons. 233 aa. Score = 12.63 Terminal 4189591 4189679 1.34 - 2 0 0.00 5.08 9.60 0.00 AA 204:233 chr6_cox_hap1_140 Internal 4190163 4190367 4.46 - 0 1 0.30 2.71 19.13 0.00 AA 136:204 chr6_cox_hap1_140 Internal 4190766 4190895 2.33 - 1 0 2.79 3.22 9.32 0.00 AA 92:135 chr6_cox_hap1_140 Internal 4191304 4191415 4.13 - 2 2 5.21 3.95 9.08 0.00 AA 55: 92 chr6_cox_hap1_140 Internal 4191574 4191721 1.61 - 0 1 1.26 3.92 8.76 0.00 AA 6: 55 chr6_cox_hap1_140 First 4192614 4192628 -1.24 - 0 0 0.60 3.89 2.65 0.00 AA 1: 5 chr6_cox_hap1_140 >chr6_cox_hap1_140|geneid_v1.2_predicted_cDNA_140|699_NN ATGGCGCTACTAGATCCCACAGAATTCTTCCAGTCCCTGGGTGGGGACGGAGAAAGGAAC GTTCAGATTGAGATGGCCCATGGCACCACCACGCTCGCCTTCAAGTTCCAGCATGGAGTG ATTGCAGCAGTGGATTCTCGGGCCTCAGCTGGGTCCTACATTAGTGCCTTACGGGTGAAC AAGGTGATTGAGATTAACCCTTACCTGCTTGGCACCATGTCTGGCTGTGCAGCAGACTGT CAGTACTGGGAGCGCCTGCTGGCCAAGGAATGCAGGCTGTACTATCTGCGAAATGGAGAA CGTATTTCAGTGTCGGCAGCCTCCAAGCTGCTGTCCAACATGATGTGCCAGTACCGGGGC ATGGGCCTCTCTATGGGCAGTATGATCTGTGGCTGGGATAAGAAGGGTCCTGGACTCTAC TACGTGGATGAACATGGGACTCGGCTCTCAGGAAATATGTTCTCCACGGGTAGTGGGAAC ACTTATGCCTACGGGGTCATGGACAGTGGCTATCGGCCTAATCTTAGCCCTGAAGAGGCC TATGACCTTGGCCGCAGGGCTATTGCTTATGCCACTCACAGAGACAGCTATTCTGGAGGC GTTGTCAATATGTACCACATGAAGGAAGATGGTTGGGTGAAAGTAGAAAGTACAGATGTC AGTGACCTGCTGCACCAGTACCGGGAAGCCAATCAATAA >chr6_cox_hap1_140|geneid_v1.2_predicted_protein_140|233_AA MALLDPTEFFQSLGGDGERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRVN KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG MGLSMGSMICGWDKKGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEA YDLGRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREANQ* # Gene 141 (Reverse). 8 exons. 465 aa. Score = 18.55 Terminal 4194211 4194417 2.11 - 0 0 0.00 4.09 11.63 0.00 AA 397:465 chr6_cox_hap1_141 Internal 4195700 4195836 2.97 - 2 0 3.99 3.37 8.88 0.00 AA 351:396 chr6_cox_hap1_141 Internal 4196145 4196307 1.24 - 0 1 1.20 3.70 8.23 0.00 AA 297:351 chr6_cox_hap1_141 Internal 4196551 4196724 2.32 - 0 0 2.74 3.22 9.36 0.00 AA 239:296 chr6_cox_hap1_141 Internal 4197284 4197472 1.23 - 0 0 1.76 5.22 5.11 0.00 AA 176:238 chr6_cox_hap1_141 Internal 4197622 4197750 3.31 - 0 0 3.66 5.38 7.21 0.00 AA 133:175 chr6_cox_hap1_141 Internal 4198952 4199149 4.97 - 0 0 -0.09 3.39 19.98 0.00 AA 67:132 chr6_cox_hap1_141 First 4199576 4199773 0.41 - 0 0 3.47 3.47 3.12 0.00 AA 1: 66 chr6_cox_hap1_141 >chr6_cox_hap1_141|geneid_v1.2_predicted_cDNA_141|1395_NN ATGTCTCGGGTAACAGAGGACACGTCCACCCTGAGTGATTCTCTGAGTGAGAATCTGAGC TTATTTCTGTGGTACCTGGTGCGAGGCCTATGTCTCTTGGGGATCATGCTCTGGGGATCA GTGTCCCTCACCATGGTCACCCTGATCACCCTGCCTCTGCTTTTCCTTCTGCCCAAGAAG GTGGGAAAATGGTACCAGTTGCTGGAAGTGCAGGTGCGGGAATCTCTGGCAAAGTCCAGC CAGGTGGCCATTGAGGCTCTGTCGGCCATGCCTACAGTTCGAAGCTTTGCCAACGAGGAG GGCGAAGCCCAGAAGTTTAGGGAAAAGCTGCAAGAAATAAAGACACTCAACCAGAAGGAG GCTGTGGCCTATGCAGTCAACTCCTGGACCACTAGTATTTCAGGTATGCTGCTGAAAGTG GGAATCCTCTACATTGGTGGGCAGCTGGTGACCAGTGGGGCTGTAAGCAGTGGGAACCTT GTCACATTTGTTCTCTACCAGATGCAGTTCACCCAGGCTGTGGAGGTACTGCTCTCCATC TACCCCAGAGTACAGAAGGCTGTGGGCTCCTCAGAGAAAATATTTGAGTACCTGGACCGC ACCCCTCGCTGCCCACCCAGTGGTCTGTTGACTCCCTTACACTTGGAGGGCCTTGTCCAG TTCCAAGATGTCTCCTTTGCCTACCCAAACCGCCCAGATGTCTTAGTGCTACAGGGGCTG ACATTCACCCTACGCCCTGGCGAGGTGACGGCGCTGGTGGGACCCAATGGGTCTGGGAAG AGCACAGTGGCTGCCCTGCTGCAGAATCTGTACCAGCCCACCGGGGGACAGCTGCTGTTG GATGGGAAGCCCCTTCCCCAATATGAGCACCGCTACCTGCACAGGCAGGTGGCTGCAGTG GGACAAGAGCCACAGGTATTTGGAAGAAGTCTTCAAGAAAATATTGCCTATGGCCTGACC CAGAAGCCAACTATGGAGGAAATCACAGCTGCTGCAGTAAAGTCTGGGGCCCATAGTTTC ATCTCTGGACTCCCTCAGGGCTATGACACAGAGGTAGACGAGGCTGGGAGCCAGCTGTCA GGGGGTCAGCGACAGGCAGTGGCGTTGGCCCGAGCATTGATCCGGAAACCGTGTGTACTT ATCCTGGATGATGCCACCAGTGCCCTGGATGCAAACAGCCAGTTACAGGTGGAGCAGCTC CTGTACGAAAGCCCTGAGCGGTACTCCCGCTCAGTGCTTCTCATCACCCAGCACCTCAGC CTGGTGGAGCAGGCTGACCACATCCTCTTTCTGGAAGGAGGCGCTATCCGGGAGGGGGGA ACCCACCAGCAGCTCATGGAGAAAAAGGGGTGCTACTGGGCCATGGTGCAGGCTCCTGCA GATGCTCCAGAATGA >chr6_cox_hap1_141|geneid_v1.2_predicted_protein_141|465_AA MSRVTEDTSTLSDSLSENLSLFLWYLVRGLCLLGIMLWGSVSLTMVTLITLPLLFLLPKK VGKWYQLLEVQVRESLAKSSQVAIEALSAMPTVRSFANEEGEAQKFREKLQEIKTLNQKE AVAYAVNSWTTSISGMLLKVGILYIGGQLVTSGAVSSGNLVTFVLYQMQFTQAVEVLLSI YPRVQKAVGSSEKIFEYLDRTPRCPPSGLLTPLHLEGLVQFQDVSFAYPNRPDVLVLQGL TFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGKPLPQYEHRYLHRQVAAV GQEPQVFGRSLQENIAYGLTQKPTMEEITAAAVKSGAHSFISGLPQGYDTEVDEAGSQLS GGQRQAVALARALIRKPCVLILDDATSALDANSQLQVEQLLYESPERYSRSVLLITQHLS LVEQADHILFLEGGAIREGGTHQQLMEKKGCYWAMVQAPADAPE* # Gene 142 (Forward). 5 exons. 197 aa. Score = 9.16 First 4204779 4204837 0.31 + 0 2 2.11 3.51 6.23 0.00 AA 1: 20 chr6_cox_hap1_142 Internal 4205895 4206026 4.27 + 1 2 2.75 2.09 17.29 0.00 AA 20: 64 chr6_cox_hap1_142 Internal 4206637 4206766 2.96 + 1 0 4.36 4.39 6.78 0.00 AA 64:107 chr6_cox_hap1_142 Internal 4206996 4207137 1.80 + 0 1 0.84 2.02 12.73 0.00 AA 108:155 chr6_cox_hap1_142 Terminal 4208037 4208164 -0.18 + 2 0 1.18 0.00 11.65 0.00 AA 155:197 chr6_cox_hap1_142 >chr6_cox_hap1_142|geneid_v1.2_predicted_cDNA_142|591_NN ATGGCAGTGGAGTTTGACGGGGGCGTTGTGATGGGTTCTGATTCCCGAGTGTCTGCAGGC GAGGCGGTGGTGAACCGAGTGTTTGACAAGCTGTCCCCGCTGCACGAGCGCATCTACTGT GCACTCTCTGGTTCAGCTGCTGATGCCCAAGCCGTGGCCGACATGGCCGCCTACCAGCTG GAGCTCCATGGGATAGAACTGGAGGAACCTCCACTTGTTTTGGCTGCTGCAAATGTGGTG AGAAATATCAGCTATAAATATCGAGAGGACTTGTCTGCACATCTCATGGTAGCTGGCTGG GACCAACGTGAAGGAGGTCAGGTATATGGAACCCTGGGAGGAATGCTGACTCGACAGCCT TTTGCCATTGGTGGCTCCGGCAGCACCTTTATCTATGGTTATGTGGATGCAGCATATAAG CCAGGCATGTCTCCCGAGGAGTGCAGGCGCTTCACCACAGACGCTATTGCTCTGGCCATG AGCCGGGATGGCTCAAGCGGGGGTGTCATCTACCTGGTCACTATTACAGCTGCCGGTGTG GACCATCGAGTCATCTTGGGCAATGAACTGCCAAAATTCTATGATGAGTGA >chr6_cox_hap1_142|geneid_v1.2_predicted_protein_142|197_AA MAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQAVADMAAYQL ELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQREGGQVYGTLGGMLTRQP FAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVIYLVTITAAGV DHRVILGNELPKFYDE* # Gene 143 (Reverse). 1 exons. 206 aa. Score = 22.82 Single 4227848 4228465 22.82 - 0 0 0.00 5.15 63.21 0.00 AA 1:206 chr6_cox_hap1_143 >chr6_cox_hap1_143|geneid_v1.2_predicted_cDNA_143|618_NN ATGGCGGCCTCCACGGCCTCGCAACGGCCCCTCAAGGGGATCCTGAAGGACAACACCTCT ACGACTTCCTCTATGGTGGCGTCGGCCGAACATCCCCGTGGGAGTGTCCACGAGCAGCTG AGCAAAAAATCCCAGAAGTGGGATGAAATGAACATCCTGGCGACATATCGTCCAGCAGAC AAAGACTATGGTTTAATGAAAATAGATGAACCAAGCACTCCTTACCATAGTACGATGGGT GATGATGAAGATGCATGTAGTGATACAGAAACCACTGAAGCTATGGCAACAGATAGCTTG GCTAAGAACTTAGCTGCTGCTGAAGGCTTGGAGCCAAAGTATCAGGTTCAGGAACAAGAA AGCAGTGGAGAGGAGGATAGTGACCTCTCACCTGAAGAACGAGAAAAAAAGCGACAATTT GAAATGAGAAGGACGCTTCACTACAATGAAGGACTCAATATCAAACTAGCTAGACAATTA ATTTCAAAAGACCTACACGATGATGACAAAGTTGAAGAAATGTTAGAGACTGCACATGGA GAAAGCATGAATACGGAAGAATCAAATCAAGGATCTACTGCAAGTGACCAACAGCAAAAT AAATCACGAAGTTCATAG >chr6_cox_hap1_143|geneid_v1.2_predicted_protein_143|206_AA MAASTASQRPLKGILKDNTSTTSSMVASAEHPRGSVHEQLSKKSQKWDEMNILATYRPAD KDYGLMKIDEPSTPYHSTMGDDEDACSDTETTEAMATDSLAKNLAAAEGLEPKYQVQEQE SSGEEDSDLSPEEREKKRQFEMRRTLHYNEGLNIKLARQLISKDLHDDDKVEEMLETAHG ESMNTEESNQGSTASDQQQNKSRSS* # Gene 144 (Reverse). 9 exons. 501 aa. Score = 17.40 Terminal 4262347 4262472 -0.58 - 0 0 0.00 3.87 6.64 0.00 AA 460:501 chr6_cox_hap1_144 Internal 4281500 4281519 -0.35 - 2 0 4.37 4.41 -0.16 0.00 AA 453:459 chr6_cox_hap1_144 Internal 4285800 4286084 3.28 - 2 1 2.10 5.64 9.06 0.00 AA 358:453 chr6_cox_hap1_144 Internal 4287312 4287593 4.69 - 2 1 1.42 5.22 15.64 0.00 AA 264:358 chr6_cox_hap1_144 Internal 4297904 4298032 0.37 - 2 1 2.04 -0.72 11.42 0.00 AA 221:264 chr6_cox_hap1_144 Internal 4298244 4298522 2.48 - 2 1 2.07 2.60 11.70 0.00 AA 128:221 chr6_cox_hap1_144 Internal 4299152 4299436 6.25 - 2 1 1.58 5.33 17.78 0.00 AA 33:128 chr6_cox_hap1_144 Internal 4319176 4319237 0.38 - 1 1 3.94 4.49 0.80 0.00 AA 12: 33 chr6_cox_hap1_144 First 4320896 4320930 0.88 - 0 2 3.24 2.66 5.86 0.00 AA 1: 12 chr6_cox_hap1_144 >chr6_cox_hap1_144|geneid_v1.2_predicted_cDNA_144|1503_NN ATGGCGGCCCCGGACGACTCGAAGGCTCTGTATCGGGAGAAAACAAACTTGTGTACGTAT CTGGGAAAAATAATCAACGTAGGTGAACAAATATACGCTCCTACTCCAATGTGGCCAGAT GACCTGCAAAACCACACATTCCTGCACACAGTGTACTGCCAGGATGGGAGTCCCAGTGTG GGACTCTCTGAGGCCTACGACGAGGACCAGCTTTTCTTCTTCGACTTTTCCCAGAACACT CGGGTGCCTCGCCTGCCCGAATTTGCTGACTGGGCTCAGGAACAGGGAGATGCTCCTGCC ATTTTATTTGACAAAGAGTTCTGCGAGTGGATGATCCAGCAAATAGGGCCAAAACTTGAT GGGAAAATCCCGGTGTCCAGAGGGTTTCCTATCGCTGAAGTGTTCACGCTGAAGCCCCTG GAGTTTGGCAAGCCCAACACTTTGGTCTGTTTTGTCAGTAATCTCTTCCCACCCATGCTG ACAGTGAACTGGCAGCATCATTCCGTCCCTGTGGAAGGATTTGGGCCTACTTTTGTCTCA GCTGTCGATGGACTCAGCTTCCAGGCCTTTTCTTACTTAAACTTCACACCAGAACCTTCT GACATTTTCTCCTGCATTGTGACTCACGAAATTGACCGCTACACAGCAATTGCCTATTGG GTACCCCGGAACGCACTGCCCTCAGATCTGCTGGAGAATGTGCTGTGTGGCGTGGCCTTT GGCCTGGGTGTGCTGGGCATCATCGTGGGCATTGTTCTCATCATCTACTTCCGGAAGCCT TGCTCAGGTGGTGGCTTCGTGGCCCATGTGGAAAGCACCTGTCTGTTGGATGATGCTGGG ACTCCAAAGGATTTCACATACTGCATCTCCTTCAACAAGGATCTGCTGACCTGCTGGGAT CCAGAGGAGAATAAGATGGCCCCTTGCGAATTTGGGGTGCTGAATAGCTTGGCGAATGTC CTCTCACAGCACCTCAACCAAAAAGACACCCTGATGCAGCGCTTGCGCAATGGGCTTCAG AATTGTGCCACACACACCCAGCCCTTCTGGGGATCACTGACCAACAGGACACGGCCACCA TCTGTGCAAGTAGCCAAAACCACTCCTTTTAACACGAGGGAGCCTGTGATGCTGGCCTGC TATGTGTGGGGCTTCTATCCAGCAGAAGTGACTATCACGTGGAGGAAGAACGGGAAGCTT GTCATGCCTCACAGCAGTGCGCACAAGACTGCCCAGCCCAATGGAGACTGGACATACCAG ACCCTCTCCCATTTAGCCTTAACCCCCTCTTACGGGGACACTTACACCTGTGTGGTAGAG CACACTGGGGCTCCTGAGCCCATCCTTCGGGACTGGAGAAAGGCTGTCCCCTTCCAGGAA CTGGAAGCTTTATTTCTGGTCCTCAAAGGGCAAAGTGACAAGCGACATTCAATAGCTCAT GGCCTGAGGCTTCCTGATGCCCAGGGTCTTTCACTCGTAGCCAGGACTGATGTGTTGTCA TAG >chr6_cox_hap1_144|geneid_v1.2_predicted_protein_144|501_AA MAAPDDSKALYREKTNLCTYLGKIINVGEQIYAPTPMWPDDLQNHTFLHTVYCQDGSPSV GLSEAYDEDQLFFFDFSQNTRVPRLPEFADWAQEQGDAPAILFDKEFCEWMIQQIGPKLD GKIPVSRGFPIAEVFTLKPLEFGKPNTLVCFVSNLFPPMLTVNWQHHSVPVEGFGPTFVS AVDGLSFQAFSYLNFTPEPSDIFSCIVTHEIDRYTAIAYWVPRNALPSDLLENVLCGVAF GLGVLGIIVGIVLIIYFRKPCSGGGFVAHVESTCLLDDAGTPKDFTYCISFNKDLLTCWD PEENKMAPCEFGVLNSLANVLSQHLNQKDTLMQRLRNGLQNCATHTQPFWGSLTNRTRPP SVQVAKTTPFNTREPVMLACYVWGFYPAEVTITWRKNGKLVMPHSSAHKTAQPNGDWTYQ TLSHLALTPSYGDTYTCVVEHTGAPEPILRDWRKAVPFQELEALFLVLKGQSDKRHSIAH GLRLPDAQGLSLVARTDVLS* # Gene 145 (Forward). 10 exons. 672 aa. Score = 43.98 First 4323216 4323407 4.01 + 0 0 2.81 4.32 11.85 0.00 AA 1: 64 chr6_cox_hap1_145 Internal 4324028 4324165 3.82 + 0 0 3.46 4.42 10.23 0.00 AA 65:110 chr6_cox_hap1_145 Internal 4324675 4324813 3.33 + 0 1 3.55 3.03 10.95 0.00 AA 111:157 chr6_cox_hap1_145 Internal 4324894 4325108 3.19 + 2 0 6.18 2.68 8.56 0.00 AA 157:228 chr6_cox_hap1_145 Internal 4325206 4325580 7.33 + 0 0 5.87 2.10 18.86 0.00 AA 229:353 chr6_cox_hap1_145 Internal 4326086 4326214 6.90 + 0 0 4.06 4.94 16.24 0.00 AA 354:396 chr6_cox_hap1_145 Internal 4326770 4327032 5.54 + 0 2 5.71 1.97 14.82 0.00 AA 397:484 chr6_cox_hap1_145 Internal 4328476 4328780 7.44 + 1 1 3.78 2.24 22.07 0.00 AA 484:586 chr6_cox_hap1_145 Internal 4328990 4329112 3.98 + 2 1 1.35 5.20 12.65 0.00 AA 586:627 chr6_cox_hap1_145 Terminal 4329230 4329366 -1.56 + 2 0 3.32 0.00 3.63 0.00 AA 627:672 chr6_cox_hap1_145 >chr6_cox_hap1_145|geneid_v1.2_predicted_cDNA_145|2016_NN ATGGCTTCGGTGCCTGCTTTGCAACTTACCCCTGCCAACCCACCACCCCCGGAGGTGTCC AATCCCAAAAAGCCAGGACGAGTTACCAACCAGCTGCAATACCTACACAAGGTAGTGATG AAGGCTCTGTGGAAACATCAGTTCGCATGGCCATTCCGGCAGCCTGTGGATGCTGTCAAA CTGGGTCTACCGGATTATCACAAAATTATAAAACAGCCTATGGACATGGGTACTATTAAG AGGAGACTTGAAAACAATTATTATTGGGCTGCTTCAGAGTGTATGCAAGATTTTAATACC ATGTTCACCAACTGTTACATTTACAACAAGCCCACTGATGATATTGTCCTAATGGCACAA ACGCTGGAAAAGATATTCCTACAGAAGGTTGCATCAATGCCACAAGAAGAACAAGAGCTG GTAGTGACCATCCCTAAGAACAGCCACAAGAAGGGGGCCAAGTTGGCAGCGCTCCAGGGC AGTGTTACCAGTGCCCATCAGGTGCCTGCCGTCTCTTCTGTGTCACACACAGCCCTCTAT ACTCCTCCACCTGAGATACCTACCACTGTCCTCAACATTCCCCACCCATCAGTCATTTCC TCTCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCCGCTCCTTGCTGTTACTGCAGCT CCTCCAGCCCAGCCCCTTGCCAAGAAAAAAGGCGTAAAGCGGAAAGCAGATACTACCACC CCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCCTGGGAGTCTTGAG CCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCCCATCAAGCCCCCA CGCAAAGACTTGCCTGACTCTCAGCAACAACACCAGAGCTCTAAGAAAGGAAAGCTTTCA GAACAGTTAAAACATTGCAATGGCATTTTGAAGGAGTTACTCTCTAAGAAGCATGCTGCC TATGCTTGGCCTTTCTATAAACCAGTGGATGCTTCTGCACTTGGCCTGCATGACTACCAT GACATCATTAAGCACCCCATGGACCTCAGCACTGTCAAGCGGAAGATGGAGAACCGTGAT TACCGGGATGCACAGGAGTTTGCTGCTGATGTACGGCTTATGTTCTCCAACTGCTATAAG TACAATCCCCCAGATCACGATGTTGTGGCAATGGCACGAAAGCTACAGCTTCGGGCAGTA CATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAGGAAAAGAGAG AAAAAAGAGAAAAAGAAGAAACGGAAGGCAGAGAAGCATCGAGGCCGAGCTGGGGCCGAT GAAGATGACAAGGGGCCTAGGGCACCCCGCCCACCTCAACCTAAGAAGTCCAAGAAAGCA AGTGGCAGTGGGGGTGGCAGTGCTGCTTTAGGCCCTTCTGGCTTTGGACCTTCTGGAGGA AGTGGCACCAAGCTCCCCAAAAAGGCCACAAAGACAGCCCCACCTGCCCTGCCTACAGGT TATGATTCAGAGGAGGAGGAAGAGAGCAGGCCCATGAGTTACGATGAGAAGCGGCAGCTG AGCCTGGACATCAACAAATTACCTGGGGAGAAGCTGGGCCGAGTTGTGCATATAATCCAA GCCAGGGAGCCCTCTTTACGTGATTCAAACCCAGAAGAGATTGAGATTGATTTTGAAACA CTCAAGCCATCCACACTTAGAGAGCTTGAGCGCTATGTCCTTTCCTGCCTACGTAAGAAA CCCCGGAAGCCCTACACCATTAAGAAGCCTGTGGGAAAGACAAAGGAGGAACTGGCTTTG GAGAAAAAGCGGGAATTAGAAAAGCGGTTACAAGATGTCAGCGGACAGCTCAATTCTACT AAAAAGCCCCCCAAGAAAGCGAATGAGAAAACAGAGTCATCCTCTGCACAGCAAGTAGCA GTGTCACGCCTTAGCGCTTCCAGCTCTAGCTCAGATTCCAGCTCCTCCTCTTCCTCGTCG TCGTCTTCAGACACCAGTGATTCAGACTCAGGCTAA >chr6_cox_hap1_145|geneid_v1.2_predicted_protein_145|672_AA MASVPALQLTPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVK LGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQ TLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSVTSAHQVPAVSSVSHTALY TPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVTAAPPAQPLAKKKGVKRKADTTT PTPTAILAPGSPASPPGSLEPKAARLPPMRRESGRPIKPPRKDLPDSQQQHQSSKKGKLS EQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQLRAVHEQLAALSQGPISKPKRKRE KKEKKKKRKAEKHRGRAGADEDDKGPRAPRPPQPKKSKKASGSGGGSAALGPSGFGPSGG SGTKLPKKATKTAPPALPTGYDSEEEEESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQ AREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPYTIKKPVGKTKEELAL EKKRELEKRLQDVSGQLNSTKKPPKKANEKTESSSAQQVAVSRLSASSSSSDSSSSSSSS SSSDTSDSDSG* # Gene 146 (Reverse). 5 exons. 301 aa. Score = 26.08 Terminal 4335752 4335907 1.89 - 0 0 0.00 8.32 6.12 0.00 AA 250:301 chr6_cox_hap1_146 Internal 4348632 4348719 -1.44 - 1 0 1.78 4.03 1.56 0.00 AA 220:249 chr6_cox_hap1_146 Internal 4355681 4355816 4.17 - 2 2 0.21 5.60 14.20 0.00 AA 175:220 chr6_cox_hap1_146 Internal 4355912 4356193 9.38 - 2 1 1.80 0.41 32.63 0.00 AA 81:175 chr6_cox_hap1_146 First 4356614 4356854 12.08 - 0 1 2.11 0.82 38.31 0.00 AA 1: 81 chr6_cox_hap1_146 >chr6_cox_hap1_146|geneid_v1.2_predicted_cDNA_146|903_NN ATGGGCTCCTACGGACCCGCCTTCTACCAGTCTTACGGCGCCTCGGGCCAGTTCACCCAT GAATTTGATGAGGAACAGCTGTTCTCTGTGGACCTGAAGAAAAGCGAGGCCGTGTGGCGT CTGCCTGAGTTTGGCGACTTTGCCCGCTTTGACCCGCAGGGCGGGCTGGCCGGCATCGCC GCAATCAAAGCCCATCTGGACATCCTGGTGGAGCGCTCCAACCGCAGCAGAGCCATCAAC GTGCCTCCACGGGTGACCGTGCTCCCCAAGTCTCGGGTGGAGCTGGGCCAGCCCAACATC CTCATCTGCATCGTGGACAACATCTTCCCCCCTGTGATCAATATCACCTGGCTGCGCAAC GGCCAAACTGTCACTGAGGGAGTGGCCCAGACCAGCTTCTATTCCCAGCCTGACCATTTG TTCCGCAAGTTCCACTACCTGCCCTTCGTGCCCTCAGCCGAGGACGTCTATGACTGCCAG GTGGAGCACTGGGGCCTGGATGCGCCACTCCTCAGGCATTGGGAGCTCCAGGTGCCTATT CCACCACCAGATGCCATGGAGACCCTGGTCTGTGCCCTGGGCCTGGCCATCGGCCTGGTG GGCTTCCTCGTGGGCACCGTCCTCATCATCATGGGCACATATGTGTCCAGTGTCCCCAGA GTCCCAACACCGCTCTTGAGACCTGGTCAGGTTCCCAGTTGCCCTTTATTCCTTTCCTCG GGCCTTCAGTATATGGATCTGCTTCAGGAACTCTGGGTGAGAAACAAAACCATGCAGGAA GACAAGGTAATAACTGTCTTTCTTGGAAGAACTGTCATTGTCTCTACAACCTGCCTTCAT AGAGAAGCCAGTTCCAACACATCTTCTGCAGGGGCAGAAGAGGGGAAAGTATTCATCAAT TAA >chr6_cox_hap1_146|geneid_v1.2_predicted_protein_146|301_AA MGSYGPAFYQSYGASGQFTHEFDEEQLFSVDLKKSEAVWRLPEFGDFARFDPQGGLAGIA AIKAHLDILVERSNRSRAINVPPRVTVLPKSRVELGQPNILICIVDNIFPPVINITWLRN GQTVTEGVAQTSFYSQPDHLFRKFHYLPFVPSAEDVYDCQVEHWGLDAPLLRHWELQVPI PPPDAMETLVCALGLAIGLVGFLVGTVLIIMGTYVSSVPRVPTPLLRPGQVPSCPLFLSS GLQYMDLLQELWVRNKTMQEDKVITVFLGRTVIVSTTCLHREASSNTSSAGAEEGKVFIN * # Gene 147 (Forward). 2 exons. 154 aa. Score = 0.68 First 4405349 4405559 1.58 + 0 1 1.76 4.37 8.63 0.00 AA 1: 71 chr6_cox_hap1_147 Terminal 4413003 4413253 -0.90 + 2 0 0.43 0.00 10.99 0.00 AA 71:154 chr6_cox_hap1_147 >chr6_cox_hap1_147|geneid_v1.2_predicted_cDNA_147|462_NN ATGGAAGCCAAATTTCACAGTGGATCTAACAAAGTAGCTAATGGGTACTATGCTTCTGAG AACCTGAACAGGCATCTGAGAGCTGTAACTAGAAGAAAAGTAAAGACTCCGGACTCCAGC ACCAAGCAGGTTTTCCTTAGCAATTTACAACCTGAAGCTCCAAGGAAAAACTATTTTAGC ATACACCAAAACTATTCCCATGTGCCAACAGACAGACCAAATCTCTTCCCTCAGAGACTT CAAACACTGCAGTCTTCAAACTACATCCAAGAAAATCTTCATCCAAGTAAAATTTCCCCC AAATATCCTTTCTCTACCCCACCCTATCCTGTAGTTAGGGAAAAACCCAGGACTGAATCA ATATCCTCAGACCTTTCCGTTCAAGTGGGATCAGAACCTTTAGTAACCACATCGGCAACA GAGGTTGAAACCACACCTTCAAGAAATAGTATTCACATGTGA >chr6_cox_hap1_147|geneid_v1.2_predicted_protein_147|154_AA MEAKFHSGSNKVANGYYASENLNRHLRAVTRRKVKTPDSSTKQVFLSNLQPEAPRKNYFS IHQNYSHVPTDRPNLFPQRLQTLQSSNYIQENLHPSKISPKYPFSTPPYPVVREKPRTES ISSDLSVQVGSEPLVTTSATEVETTPSRNSIHM* # Gene 148 (Reverse). 4 exons. 261 aa. Score = 16.32 Terminal 4416934 4417088 2.33 - 2 0 0.00 4.78 11.16 0.00 AA 210:261 chr6_cox_hap1_148 Internal 4417303 4417584 5.68 - 2 1 1.02 5.03 17.64 0.00 AA 116:210 chr6_cox_hap1_148 Internal 4417925 4418170 8.44 - 2 1 3.32 4.15 22.39 0.00 AA 34:116 chr6_cox_hap1_148 First 4421755 4421854 -0.14 - 0 1 3.29 1.05 7.02 0.00 AA 1: 34 chr6_cox_hap1_148 >chr6_cox_hap1_148|geneid_v1.2_predicted_cDNA_148|783_NN ATGCGCCCTGAAGACAGAATGTTCCATATCAGAGCTGTGATCTTGAGAGCCCTCTCCTTG GCTTTCCTGCTGAGTCTCCGAGGAGCTGGGGCCATCAAGGCGGACCATGTGTCAACTTAT GCCGCGTTTGTACAGACGCATAGACCAACAGGGGAGTTTATGTTTGAATTTGATGAAGAT GAGATGTTCTATGTGGATCTGGACAAGAAGGAGACCGTCTGGCATCTGGAGGAGTTTGGC CAAGCCTTTTCCTTTGAGGCTCAGGGCGGGCTGGCTAACATTGCTATATTGAACAACAAC TTGAATACCTTGATCCAGCGTTCCAACCACACTCAGGCCACCAACGATCCCCCTGAGGTG ACCGTGTTTCCCAAGGAGCCTGTGGAGCTGGGCCAGCCCAACACCCTCATCTGCCACATT GACAAGTTCTTCCCACCAGTGCTCAACGTCACGTGGCTGTGCAACGGGGAGCTGGTCACT GAGGGTGTCGCTGAGAGCCTCTTCCTGCCCAGAACAGATTACAGCTTCCACAAGTTCCAT TACCTGACCTTTGTGCCCTCAGCAGAGGACTTCTATGACTGCAGGGTGGAGCACTGGGGC TTGGACCAGCCGCTCCTCAAGCACTGGGAGGCCCAAGAGCCAATCCAGATGCCTGAGACA ACGGAGACTGTGCTCTGTGCCCTGGGCCTGGTGCTGGGCCTAGTCGGCATCATCGTGGGC ACCGTCCTCATCATAAAGTCTCTGCGTTCTGGCCATGACCCCCGGGCCCAGGGGACCCTG TGA >chr6_cox_hap1_148|geneid_v1.2_predicted_protein_148|261_AA MRPEDRMFHIRAVILRALSLAFLLSLRGAGAIKADHVSTYAAFVQTHRPTGEFMFEFDED EMFYVDLDKKETVWHLEEFGQAFSFEAQGGLANIAILNNNLNTLIQRSNHTQATNDPPEV TVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGELVTEGVAESLFLPRTDYSFHKFH YLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG TVLIIKSLRSGHDPRAQGTL* # Gene 149 (Forward). 11 exons. 634 aa. Score = 39.39 First 4427896 4428139 0.15 + 0 1 0.51 -1.68 14.64 0.00 AA 1: 82 chr6_cox_hap1_149 Internal 4428955 4429218 15.89 + 2 1 4.59 5.16 37.60 0.00 AA 82:170 chr6_cox_hap1_149 Internal 4433169 4433450 4.22 + 2 1 3.04 0.95 17.06 0.00 AA 170:264 chr6_cox_hap1_149 Internal 4433998 4434125 2.05 + 2 0 2.43 4.53 7.19 0.00 AA 264:306 chr6_cox_hap1_149 Internal 4434438 4434461 0.67 + 0 0 4.88 2.04 3.80 0.00 AA 307:314 chr6_cox_hap1_149 Internal 4440449 4440599 -0.37 + 0 1 0.71 1.72 7.93 0.00 AA 315:365 chr6_cox_hap1_149 Internal 4460688 4460819 0.24 + 2 1 2.52 4.38 2.76 0.00 AA 365:409 chr6_cox_hap1_149 Internal 4465170 4465433 15.03 + 2 1 3.97 3.88 38.31 0.00 AA 409:497 chr6_cox_hap1_149 Internal 4475787 4475990 1.61 + 2 1 1.09 0.11 14.73 0.00 AA 497:565 chr6_cox_hap1_149 Internal 4476526 4476653 0.21 + 2 0 1.24 2.50 7.43 0.00 AA 565:607 chr6_cox_hap1_149 Terminal 4489171 4489251 -0.33 + 0 0 6.21 0.00 3.73 0.00 AA 608:634 chr6_cox_hap1_149 >chr6_cox_hap1_149|geneid_v1.2_predicted_cDNA_149|1902_NN ATGCCCAACATTGCTTATGGGAGCAACAACAACAACAAAAAACACATGCTGCCCAGTGGC TTCCAGAAGTTTCTGGCCCACAGCCTCAAGGAGCTGAAAGTGCTGCTGATGTGCAACAAA TCTTACTGTGCTGAGATCGCTCACAAAATTTCCTCCAGAACTGCAAAGTCATCATGGAAA GAGTCACCCAGCCGGCCATCAGAGTCACCAACCCCAGTACCACGGTGCACAGCTAAGAAA ATGAAGAATTACGTGTACCAGTTACGGCAGGAATGCTACGCGTTTAATGGGACACAGCGC TTCCTGGAGAGATACATCTACAACCGGGAGGAGTTCGTGCGCTTCGACAGCGACGTGGGG GAGTTCCGGGCGGTGACGGAGCTGGGGCGGCCTGATGAGGACTACTGGAACAGCCAGAAG GACCTCCTGGAGGAGAAGCGGGCAGTGCCGGACAGGGTATGCAGACACAACTACGAGCTG GACGAGGCCGTGACCCTGCAGCGCCGAGTCCAGCCTAAGGTGAACGTTTCCCCCTCCAAG AAGGGGCCCCTGCAGCACCACAACCTGCTTGTCTGCCACGTGACAGATTTCTACCCAGGC AGCATTCAAGTCCGATGGTTCCTGAATGGACAGGAGGAAACAGCTGGGGTCGTGTCCACC AACCTGATCCGTAATGGAGACTGGACCTTCCAGATCCTGGTGATGCTGGAAATGACCCCC CAGCAGGGAGACGTCTACATCTGCCAAGTGGAGCACACCAGCCTGGACAGTCCTGTCACC GTGGAGTGGAAGGCACAGTCTGATTCTGCCCGGAGTAAGACATTGACGGGAGCTGGGGGC TTCGTGCTGGGGCTCATCATCTGTGGAGTGGGCATCTTCATGCACAGGAGGAGCAAGAAA GGTGAGAAAGCCTGCAAGTTCAACGAGGATCTGCATAAACAGGAAGATGGTCTCTGCAAT ACCCTCAATGACTGGCTCCCCATTGCACAGCCACGTGATGTTCAGCACTGGTGGGAAGAA CTTGTCAACATGGCAGACGAGGGTGTTGGGCTGGCCCAGATCCACAGGCTCCTTGGGAAA GACGCTTACCTCGCTCTCTTCATTCTGCCAACCTTTTCCAACTCCATGATGATCCTGCAG GTTTCAGGGGGCCCCTGGACAGTGGCTCTGACAGCATTACTGATGGTGCTGCTCATATCT GTGGTCCAGAGCAGGGCCACTCCAGAGAATTCCGTCTACCAGGAACGGCAGGAATGCTAT GCGTTCAATGGGACTCAGCGCGTTGTGGACGGGCTCATCTACAACCGGGAGGAATACGTG CATTTTGACAGCGCAGTGGGGGAGTTCCTAGCAGTGATGGAGCTGGGGCGGCCCATAGGC GAGTACTTCAATAGCCAGAAGGACTTTATGGAACGGAAGCGAGCCGAGGTGGACAAGGTG TGCAGACACAAGTACGAGCTGATGGAGCCACTCATCCGGCAGCGCCGAGATTTCTACCCA GGCAGCATTCAAGTCCGATGCTTCCTGAATGGACAGGAGGAAACAGCTGGGGTCATGTCC ACCAAGCTGATCCGTAATGAAGACTGGACCTTCCAGATCCTGGAGATGCTGGAAATGATC CCCCAGCAGGGAAACATCTACACCTGCCAAGTGAAGCACCCCAGCCTGGACAGTCCTGTC ACCGTGGAGTGGAAGGCACAGTCTGATTTTGTGCAGAGCAAGATGCTGACAGGAGCCAGG GGCTTCATGCTGGGGCTCATCATCTGTGGAGTGGACATCTTCACGCACAGAAGGAGCAAG AAAGGTGAGAAATCCTGTGAGGTTATTTTGATCACCACTGAGTACCATAAGATATACACT GGAGCCACTCAGGAGCATAAAGAGGGCATTTTTGAAAAATGA >chr6_cox_hap1_149|geneid_v1.2_predicted_protein_149|634_AA MPNIAYGSNNNNKKHMLPSGFQKFLAHSLKELKVLLMCNKSYCAEIAHKISSRTAKSSWK ESPSRPSESPTPVPRCTAKKMKNYVYQLRQECYAFNGTQRFLERYIYNREEFVRFDSDVG EFRAVTELGRPDEDYWNSQKDLLEEKRAVPDRVCRHNYELDEAVTLQRRVQPKVNVSPSK KGPLQHHNLLVCHVTDFYPGSIQVRWFLNGQEETAGVVSTNLIRNGDWTFQILVMLEMTP QQGDVYICQVEHTSLDSPVTVEWKAQSDSARSKTLTGAGGFVLGLIICGVGIFMHRRSKK GEKACKFNEDLHKQEDGLCNTLNDWLPIAQPRDVQHWWEELVNMADEGVGLAQIHRLLGK DAYLALFILPTFSNSMMILQVSGGPWTVALTALLMVLLISVVQSRATPENSVYQERQECY AFNGTQRVVDGLIYNREEYVHFDSAVGEFLAVMELGRPIGEYFNSQKDFMERKRAEVDKV CRHKYELMEPLIRQRRDFYPGSIQVRCFLNGQEETAGVMSTKLIRNEDWTFQILEMLEMI PQQGNIYTCQVKHPSLDSPVTVEWKAQSDFVQSKMLTGARGFMLGLIICGVDIFTHRRSK KGEKSCEVILITTEYHKIYTGATQEHKEGIFEK* # Gene 150 (Reverse). 28 exons. 903 aa. Score = 37.26 Terminal 4511619 4511759 -1.45 - 0 0 0.00 3.32 3.91 0.00 AA 857:903 chr6_cox_hap1_150 Internal 4512208 4512414 3.63 - 0 0 1.70 3.20 14.21 0.00 AA 788:856 chr6_cox_hap1_150 Internal 4512793 4512905 2.51 - 2 0 3.67 3.78 7.61 0.00 AA 750:787 chr6_cox_hap1_150 Internal 4513490 4513757 5.47 - 0 1 1.19 2.86 20.09 0.00 AA 661:750 chr6_cox_hap1_150 Internal 4515011 4515064 1.20 - 0 0 4.98 4.49 1.28 0.00 AA 643:660 chr6_cox_hap1_150 Internal 4517773 4517826 2.18 - 0 0 4.98 5.80 1.76 0.00 AA 625:642 chr6_cox_hap1_150 Internal 4518021 4518042 -0.77 - 1 0 -0.70 6.57 1.77 0.00 AA 617:624 chr6_cox_hap1_150 Internal 4518268 4518321 1.09 - 1 2 1.53 4.41 6.32 0.00 AA 599:617 chr6_cox_hap1_150 Internal 4518752 4518859 0.39 - 1 2 1.03 3.78 6.27 0.00 AA 563:599 chr6_cox_hap1_150 Internal 4519055 4519108 2.01 - 1 2 4.68 4.83 3.29 0.00 AA 545:563 chr6_cox_hap1_150 Internal 4519408 4519515 0.95 - 1 2 3.70 6.30 -0.13 0.00 AA 509:545 chr6_cox_hap1_150 Internal 4521443 4521496 0.49 - 1 2 3.44 4.66 1.56 0.00 AA 491:509 chr6_cox_hap1_150 Internal 4521592 4521686 -0.68 - 0 2 2.69 6.22 -2.57 0.00 AA 460:491 chr6_cox_hap1_150 Internal 4521952 4521996 0.26 - 0 0 4.61 4.14 0.01 0.00 AA 445:459 chr6_cox_hap1_150 Internal 4522467 4522520 0.10 - 0 0 2.03 5.99 0.70 0.00 AA 427:444 chr6_cox_hap1_150 Internal 4523956 4524009 0.29 - 0 0 3.51 4.17 1.71 0.00 AA 409:426 chr6_cox_hap1_150 Internal 4524199 4524243 1.44 - 0 0 3.89 5.39 2.17 0.00 AA 394:408 chr6_cox_hap1_150 Internal 4524932 4524985 0.39 - 0 0 4.10 5.48 -0.90 0.00 AA 376:393 chr6_cox_hap1_150 Internal 4525121 4525165 1.60 - 0 0 5.70 4.51 1.18 0.00 AA 361:375 chr6_cox_hap1_150 Internal 4526248 4526292 2.20 - 0 0 5.20 5.36 2.16 0.00 AA 346:360 chr6_cox_hap1_150 Internal 4527659 4527745 1.46 - 0 0 3.29 3.39 6.11 0.00 AA 317:345 chr6_cox_hap1_150 Internal 4528904 4528945 0.08 - 0 0 4.95 3.56 -0.06 0.00 AA 303:316 chr6_cox_hap1_150 Internal 4532085 4532264 0.48 - 0 0 3.12 -0.18 9.28 0.00 AA 243:302 chr6_cox_hap1_150 Internal 4533641 4533718 1.28 - 0 0 2.13 1.26 10.61 0.00 AA 217:242 chr6_cox_hap1_150 Internal 4534567 4534758 3.04 - 0 0 3.66 5.62 6.18 0.00 AA 153:216 chr6_cox_hap1_150 Internal 4536302 4536464 5.00 - 1 0 2.57 4.23 14.81 0.00 AA 98:152 chr6_cox_hap1_150 Internal 4536918 4537128 2.29 - 2 2 2.68 2.56 10.36 0.00 AA 28: 98 chr6_cox_hap1_150 First 4540099 4540180 0.36 - 0 1 4.38 5.18 -0.94 0.00 AA 1: 28 chr6_cox_hap1_150 >chr6_cox_hap1_150|geneid_v1.2_predicted_cDNA_150|2709_NN ATGGAGCGGTGCAGCCGCTGCCATCGCCTCCTCCTCCTCCTACCTCTGGTGCTGGGGCTG AGCGCGGCCCCAGGCTGGGCAGGAGGATTTCCCAAAGATTTCTCTCTGCTGACTGTTGTC CGGACCCGCCCTGGTCTCCAAGCTCCCCTCCTGACTCTCTACAGTGCCCAGGGTGTCCGA CAGCTGGGCCTGGAGCTGGGCCGACCTGTCCGCTTCCTGTATGAAGACCAGACTGGGCGG CCTCAACCTCCCTCTCAGCCAGTCTTCCGAGGCCTCAGCCTAGCAGATGGCAAGTGGCAC CGTGTGGCTGTGGCTGTGAAGGGCCAGTCTGTCACCCTCATTGTTGACTGCAAGAAGCGA GTCACCCGGCCTCTCCCCCGAAGTGCTCGTCCAGTATTGGACACCCATGGAGTGATCATC TTTGGTGCCCGTATTCTGGATGAAGAAGTCTTTGAGGGTGATGTCCAGGAGCTGGCCATT GTCCCAGGGGTCCAGGCAGCCTATGAATCATGTGAACAGAAGGAGCTGGAATGCGAGGGG GGCCAGAGGGAAAGACCCCAAAACCAACAGCCTCACAGAGCCCAGAGATCTCCACAGCAG CAACCATCAAGACTTCACAGGCCACAAAATCAGGAACCCCAGAGCCAGCCCACTGAGTCT CTCTACTATGACTACGAGCCCCCCTATTATGATGTGATGACTACGGGGACAACCCCTGAT TATCAGGAGCAGACAGATCTCCAGGTCCCCCCCACAGCCGACAGGTTCCAGGCAGAGGAA TATGGGGAGGGTGGCACAGACCCCCCTGAAGGGCCCTACGATTACACCTATGGCTATGGG GATGATTATCGTGAGGAGACAGAGCTTGGCCCTGCCCTCTCTGCGGAGACAGCCCACTCA GGAGCCGGTATGCTCGTGGAGGGGCCCCCTGGCCCAGAAGGCCCTGCGTTCCGGTTTGGC AGTGGTGGGGGTGACAAGGGCCCTGTGGTGGCGGCCCAGGAGGCTCAGGCCCAGGCGATC CTGCAGCAGGCGAGGGGAGATGACGGGGAGATTGGGCCTCGAGGGCTGCCTGGAGAGTCG GGTCTTCCCGGGCCCCAGGGTGCCATCGGCCCTCATGGAGAGAAGGGTCCTCAAGGGAAG CCAGGGCTCCCCGGCATGCCTGGCTCAGACGGACCCCCGGGTGTGGACGGAATTCGGGGT CTGAAGGGTCATAAGGGTGAGAAGGGTGAGGATGGCTTTCCTGGGTTCAAAGGTGACATA GGCGTGAAAGGTGACAGGGGCAAGCTGGGTGTTCCTGGTCTGCCTGGCTATCCTGGACGT CAGGGACCCAAGGGCCTGTCGGGGAAGTCAGGGCCTCGGGGAGAACGGGGCCCCACGGGA ACATCTGGTGGTGATGGCCCCCATGGGCCCCCTGGAGAGAGGGTGAGTGTGGATCGAAAG TCCCCTTCCCCTGAGGTCCCCAGGGAGCCTGGGGCCTCCCTGGACCTCAGGGTCCCAACG GGTTTCCTGGACCGAAAGGACCCCTGGGTGAGAAGGGCCCCATTGGCCCAACTGGCCGAG ATGGAGTGCAGGGTCCTGTGGGGCTTCCTGGTCCTGCTGGGCCTCCAGGTGTGGCTGGAG AGGATGGAGACAAGGGCCCTCCTGGACCCCCTGGACCCATTGGTCCTGTGGGGCAGCCTG GAGCAGCGGGAGCAGATGGGGAGCCCGGAGCTCGGGGACCCCAGGGACACTTTGGAGCCA AAGGTGATGAAGGAACAAGAGGATTCAATGGGCCCCCAGGACCCATTGGCCTACAGGGAC CACCTGGCCCCCCAGGACCTCGAGGTCCAGCTGGACCCAATGGCGCTGATGGCCCACAAG GTCCCCCAGGAGGGGGAACCAGGAGAGTCAGGATCTCCAGGGATCCAGGGCGAGCCAGGT GTCAAGGGACCCCCAGGGCTGCCTGGTCTCCGGGGCGATGCTGGAGCCAAGGGAGAGAAG GGTCCCCCAGGCGAGGTGATCCAGCCACTGCCCATTCAGATGCCCAAGAAGACTCGGCGC TCGGTGGATGGAAGCCGTCTGATGCAGGAAGATGAGGCCATACCGACCGGGGGAGCCCCC GGCAGTCCTGGGGGGCTGGAGGAGATCTTTGGCTCACTCGACTCCCTGCGGGAGGAGATC GAGCAGATGAGGCGGCCAACAGGGACCCAGGACAGCCCTGCTCGCACCTGCCAGGACCTG AAGCTGTGCCACCCAGAGCTTCCCGATGGAGAGTACTGGGTCGACCCCAACCAGGGCTGT GCTCGGGATGCCTTCCGAGTTTTCTGCAACTTCACAGCAGGGGGTGAGACCTGTGTGACG CCTAGGGATGACGTCACGCAGTTCTCTTACGTGGACTCAGAGGGCTCCCCAGTGGGTGTG GTCCAGCTCACCTTCCTGCGGCTGCTCAGCGTCTCAGCCCACCAGGACGTCTCCTACCCC TGCTCTGGAGCAGCCCGTGACGGTCCCCTGAGACTCCGTGGGGCCAATGAGGATGAGCTG AGCCCGGAGACTAGCCCCTATGTCAAAGAATTCAGAGATGGCTGCCAGACACAGCAAGGC CGGACGGTGCTGGAGGTGCGAACGCCTGTGCTGGAGCAGCTGCCAGTGCTGGATGCCTCC TTCTCAGACCTGGGAGCCCCACCGAGGCGGGGAGGGGTGCTGCTGGGGCCTGTCTGCTTC ATGGGATAG >chr6_cox_hap1_150|geneid_v1.2_predicted_protein_150|903_AA MERCSRCHRLLLLLPLVLGLSAAPGWAGGFPKDFSLLTVVRTRPGLQAPLLTLYSAQGVR QLGLELGRPVRFLYEDQTGRPQPPSQPVFRGLSLADGKWHRVAVAVKGQSVTLIVDCKKR VTRPLPRSARPVLDTHGVIIFGARILDEEVFEGDVQELAIVPGVQAAYESCEQKELECEG GQRERPQNQQPHRAQRSPQQQPSRLHRPQNQEPQSQPTESLYYDYEPPYYDVMTTGTTPD YQEQTDLQVPPTADRFQAEEYGEGGTDPPEGPYDYTYGYGDDYREETELGPALSAETAHS GAGMLVEGPPGPEGPAFRFGSGGGDKGPVVAAQEAQAQAILQQARGDDGEIGPRGLPGES GLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGVDGIRGLKGHKGEKGEDGFPGFKGDI GVKGDRGKLGVPGLPGYPGRQGPKGLSGKSGPRGERGPTGTSGGDGPHGPPGERVSVDRK SPSPEVPREPGASLDLRVPTGFLDRKDPWVRRAPLAQLAEMECRVLWGFLVLLGLQVWLE RMETRALLDPLDPLVLWGSLEQREQMGSPELGDPRDTLEPKVMKEQEDSMGPQDPLAYRD HLAPQDLEVQLDPMALMAHKVPQEGEPGESGSPGIQGEPGVKGPPGLPGLRGDAGAKGEK GPPGEVIQPLPIQMPKKTRRSVDGSRLMQEDEAIPTGGAPGSPGGLEEIFGSLDSLREEI EQMRRPTGTQDSPARTCQDLKLCHPELPDGEYWVDPNQGCARDAFRVFCNFTAGGETCVT PRDDVTQFSYVDSEGSPVGVVQLTFLRLLSVSAHQDVSYPCSGAARDGPLRLRGANEDEL SPETSPYVKEFRDGCQTQQGRTVLEVRTPVLEQLPVLDASFSDLGAPPRRGGVLLGPVCF MG* # Gene 151 (Reverse). 6 exons. 252 aa. Score = 15.09 Terminal 4542622 4542769 1.71 - 1 0 0.00 3.82 11.04 0.00 AA 203:252 chr6_cox_hap1_151 Internal 4542885 4542990 2.68 - 2 2 3.22 3.62 8.93 0.00 AA 168:203 chr6_cox_hap1_151 Internal 4543847 4543976 0.18 - 0 1 2.65 4.14 2.78 0.00 AA 125:168 chr6_cox_hap1_151 Internal 4544374 4544546 1.94 - 2 0 1.96 5.85 5.62 0.00 AA 67:124 chr6_cox_hap1_151 Internal 4545702 4545881 8.16 - 2 1 2.72 5.20 21.01 0.00 AA 7: 67 chr6_cox_hap1_151 First 4548180 4548198 0.43 - 0 1 3.02 4.75 1.91 0.00 AA 1: 7 chr6_cox_hap1_151 >chr6_cox_hap1_151|geneid_v1.2_predicted_cDNA_151|756_NN ATGGGCGACAGCGGGCGGGGCAAACACTACGGGGTTTACAGCTGTGAGGGTTGCAAGGGC TTCTTCAAACGCACCATCCGCAAAGACCTTACATACTCTTGCCGGGACAACAAAGACTGC ACAGTGGACAAGCGCCAGCGGAACCGCTGTCAGTACTGCCGCTATCAGAAGTGCCTGGCC ACTGGCATGAAGAGGGAGGCGGTACAGGAGGAGCGTCAGCGGGGAAAGGACAAGGATGGG GATGGGGAGGGGGCTGGGGGAGCCCCCGAGGAGATGCCTGTGGACAGGATCCTGGAGGCA GAGCTTGCTGTGGAACAGAAGAGTGACCAGGGCGTTGAGGGTCCTGGGGGAACCGGGGGT AGCGGCAGCAGCCCAAATGACCCTGTGACTAACATCTGTCAGGCAGCTGACAAACAGCTA TTCACGCTTGTTGAGTGGGCGAAGAGGATCCCACACTTTTCCTCCTTGCCTCTGGATGAT CAGGTCATATTGCTGCGGGCAGATGCCAAGGGCCTCTCCAACCCTAGTGAGGTGGAGGTC CTGCGGGAGAAAGTGTATGCATCACTGGAGACCTACTGCAAACAGAAGTACCCTGAGCAG CAGGGACGGTTTGCCAAGCTGCTGCTACGTCTTCCTGCCCTCCGGTCCATTGGCCTTAAG TGTCTAGAGCATCTGTTTTTCTTCAAGCTCATTGGTGACACCCCCATCGACACCTTCCTC ATGGAGATGCTTGAGGCTCCCCATCAACTGGCCTGA >chr6_cox_hap1_151|geneid_v1.2_predicted_protein_151|252_AA MGDSGRGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLA TGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPVDRILEAELAVEQKSDQGVEGPGGTGG SGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQVILLRADAKGLSNPSEVEV LREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFL MEMLEAPHQLA* # Gene 152 (Forward). 1 exons. 108 aa. Score = 4.10 Single 4549275 4549598 4.10 + 0 0 2.27 0.00 19.34 0.00 AA 1:108 chr6_cox_hap1_152 >chr6_cox_hap1_152|geneid_v1.2_predicted_cDNA_152|324_NN ATGACGACCTGCACGACGATCTGCAAGAGGACTTCCATGGCCACAGCCACAGGCACTCAC ATGAAGATTTCCACCATGGCCACAGCCATGCCCATGGCCATGGCCACACTCACGAGAGCA TCTGGCATGGACATACCCACGATCACGACCATGGACATTCACATGAGGATTTACACCATG GCCATAGCCATGGCTACTCCCATGAGAGCCTCTACCACAGAGGACATGGACATGACCATG AGCATAGCCATGGAGGCTATGGGGAGTCTGGGGCTCCAGGCATCAAGCAGGACCTGGATG CTGTCACTCTCTGGGCTTATGTGA >chr6_cox_hap1_152|geneid_v1.2_predicted_protein_152|108_AA MTTCTTICKRTSMATATGTHMKISTMATAMPMAMATLTRASGMDIPTITTMDIHMRIYTM AIAMATPMRASTTEDMDMTMSIAMEAMGSLGLQASSRTWMLSLSGLM* # Gene 153 (Forward). 12 exons. 660 aa. Score = 19.34 First 4550309 4550365 0.86 + 0 0 1.32 3.62 7.24 0.00 AA 1: 19 chr6_cox_hap1_153 Internal 4550437 4550638 1.27 + 0 1 2.14 4.02 6.43 0.00 AA 20: 87 chr6_cox_hap1_153 Internal 4550848 4551048 0.95 + 2 1 1.93 0.39 11.39 0.00 AA 87:154 chr6_cox_hap1_153 Internal 4552840 4553057 3.89 + 2 0 3.83 2.31 13.01 0.00 AA 154:226 chr6_cox_hap1_153 Internal 4553159 4553275 1.27 + 0 0 4.07 -0.36 10.10 0.00 AA 227:265 chr6_cox_hap1_153 Internal 4553385 4553497 0.47 + 0 2 4.53 1.50 4.63 0.00 AA 266:303 chr6_cox_hap1_153 Internal 4556699 4556834 1.09 + 1 0 3.86 1.27 7.53 0.00 AA 303:348 chr6_cox_hap1_153 Internal 4557560 4557720 0.32 + 0 2 2.46 0.86 8.32 0.00 AA 349:402 chr6_cox_hap1_153 Internal 4557849 4558064 5.56 + 1 2 2.87 0.31 21.64 0.00 AA 402:474 chr6_cox_hap1_153 Internal 4559663 4559936 5.09 + 1 0 5.03 3.34 12.66 0.00 AA 474:565 chr6_cox_hap1_153 Internal 4586161 4586302 0.39 + 0 1 3.40 -1.21 11.57 0.00 AA 566:613 chr6_cox_hap1_153 Terminal 4595750 4595892 -1.82 + 2 0 2.55 0.00 4.14 0.00 AA 613:660 chr6_cox_hap1_153 >chr6_cox_hap1_153|geneid_v1.2_predicted_cDNA_153|1980_NN ATGGACATGGACACGCTCACAGTCATACACGTGGAAGTCATGGACATGGAAGACAAGGAG GGAGAGGACATGTTGGAAGATCTGTTCTCCACTCTGACCAACTCTTTTCTTCCCTCAGAG CGTTCTACCAAGGAGAAGCAGAGCTCAGAGGAAGAAGAAAAGGAAACAAGAGGGGTTCAG AAGAGGCGAGGAGGGAGCACAGTACCCAAAGATGGGCCAGTGAGACCTCAGAACGCTGAA GAAGAAAAAAGAGGCTTAGACCTGCGTGTGTCGGGGTACCTGAATCTGGCTGCTGACTTG GCACACAACTTCACTGATGGTCTGGCCATTGGGGCTTCCTTTCGAGGGGGCCGGGGACTA GGGATCCTGACCACAATGACTGTCCTGCTACATGAAGTGCCCCACGAGGTCGGAGACTTT GCCATCTTGGTCCAGTCTGGCTGCAGCAAAAAGCAGGTTGGTGCGGGGAGCGGCATCGGC CGAGCGGTCAGTGTACGCCTGGCCGGAGAGGGGGCCACCGTAGCTGCCTGCGACCTGGAC CGGGCAGCGGCACAGGAGACGGTGCGGCTGCTGGGCGGGCCAGGGAGCAAGGAGGGGCCG CCCCGAGGGAACCATGCTGCCTTCCAGGCTGACGTGTCTGAGGCCAGGGCCGCCAGGTGC CTGCTGGAACAAGTGCAGGCCTGCTTTTCTCGCCCACCATCTGTCGTTGTGTCCTGTGCG GGCATCACCCAGGATGAGTTTCTGCTGCACATGTCTGAGGATGACTGGGACAAAGTCATA GCTGTCAACCTCAAGGGCACCTTCCTAGTCACTCAGGCTGCAGCACAAGCCCTGGTGTCC AATGGTTGTCGTGGTTCCATCATCAACATCAGTAGCATCGTAGGAAAGGTCAGGTTGAGT TGGACGAGCCTTCTTCGCCTTCTCCTCGGCTGTGGAGCCCTGGTGGGGGGTCTGCGCCCG GTCACCATGACGACGCCGGCGAATGCCCAGAATGCCAGCAAAACGTGGGAACTGAGTCTG TATGAGCTGCACCGGACCCCGCAGGAAGCCATAATGGATGGCACAGAGATTGCTGTTTCC CCTCGGTCACTGCATTCAGAACTCATGTGCCCTATCTGCCTGGACATGCTGAAGAATACG ATGACCACCAAGGAGTGCCTCCACAGATTCTGCTCTGACTGCATTGTCACAGCCCTACGG AGCGGGAACAAGGAGTGTCCTACCTGCCGAAAGAAGCTGGTGTCCAAGCGATCCCTACGG CCAGACCCCAACTTTGATGCCCTGATCTCTAAGATCTATCCTAGCCGGGAGGAATACGAG GCCCATCAAGACCGAGTGCTTATCCGCCTGAGCCGCCTGCACAACCAGCAGGCATTGAGC TCCAGCATTGAGGAGGGGCTACGCATGCAGGCCATGCACAGGTATGTGAAGACAACTGGG AATGCCACAGTGGACCACCTCTCCAAGTACTTGGCCCTGCGCATTGCCCTCGAGCGGAGG CAACAGCAGGAAGCAGGGGAGCCAGGAGGGCCTGGAGGGGGCGCCTCTGACACCGGAGGA CCTGATGGGTGTGGCGGGGAGGGTGGGGGTGCCGGAGGAGGTGACGGTCCTGAGGAGCCT GCTTTGCCCAGCCTGGAGGGCGTCAGTGAAAAGCAGTACACCATCTACATCGCACCTGGA GGCGGGGCGTTCACGGAGAAATCCTCAGAAGACTTCAAAGTCAAGCTTTATGAAGATGAT CAAAGAAATCTTAAAGGAGATGCGCTTTGCTGTTACTTGAAGAGGGAATCTGTGGGCCTT CCATTAAAGCTTTTGGATGAAAATGAAATTAGAGGCTCAGCTCTGAAATTAATGCCAAGG CGAGCAAACGCCCGCCCCCCACCCCCTGCCGCCCTCGCCTTATGCCGAGACTTTGCTGTT GAACACGAAGTAAACGTTTCCCAGAAAGCCCAGTTTAAGAAACAATTCAGGGCGAGGTGA >chr6_cox_hap1_153|geneid_v1.2_predicted_protein_153|660_AA MDMDTLTVIHVEVMDMEDKEGEDMLEDLFSTLTNSFLPSERSTKEKQSSEEEEKETRGVQ KRRGGSTVPKDGPVRPQNAEEEKRGLDLRVSGYLNLAADLAHNFTDGLAIGASFRGGRGL GILTTMTVLLHEVPHEVGDFAILVQSGCSKKQVGAGSGIGRAVSVRLAGEGATVAACDLD RAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCA GITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVRLS WTSLLRLLLGCGALVGGLRPVTMTTPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVS PRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLR PDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRYVKTTG NATVDHLSKYLALRIALERRQQQEAGEPGGPGGGASDTGGPDGCGGEGGGAGGGDGPEEP ALPSLEGVSEKQYTIYIAPGGGAFTEKSSEDFKVKLYEDDQRNLKGDALCCYLKRESVGL PLKLLDENEIRGSALKLMPRRANARPPPPAALALCRDFAVEHEVNVSQKAQFKKQFRAR* # Gene 154 (Reverse). 11 exons. 452 aa. Score = 27.21 Terminal 4598771 4598917 1.96 - 0 0 0.00 1.83 14.64 0.00 AA 404:452 chr6_cox_hap1_154 Internal 4599448 4599566 0.17 - 2 0 1.39 2.62 6.92 0.00 AA 364:403 chr6_cox_hap1_154 Internal 4599790 4599901 2.38 - 0 1 2.79 5.48 6.03 0.00 AA 327:364 chr6_cox_hap1_154 Internal 4611398 4611463 3.63 - 0 0 2.80 6.12 8.19 0.00 AA 305:326 chr6_cox_hap1_154 Internal 4611686 4611793 3.11 - 0 0 0.70 6.67 9.22 0.00 AA 269:304 chr6_cox_hap1_154 Internal 4611922 4612017 3.20 - 0 0 3.66 4.78 7.84 0.00 AA 237:268 chr6_cox_hap1_154 Internal 4614471 4614626 2.41 - 0 0 2.70 3.81 8.75 0.00 AA 185:236 chr6_cox_hap1_154 Internal 4615779 4615911 5.08 - 1 0 4.15 3.48 13.75 0.00 AA 140:184 chr6_cox_hap1_154 Internal 4616028 4616122 0.59 - 0 2 -0.17 2.31 10.77 0.00 AA 109:140 chr6_cox_hap1_154 Internal 4616413 4616563 1.04 - 1 0 1.74 1.88 9.66 0.00 AA 58:108 chr6_cox_hap1_154 First 4616928 4617100 3.65 - 0 2 2.15 1.85 15.64 0.00 AA 1: 58 chr6_cox_hap1_154 >chr6_cox_hap1_154|geneid_v1.2_predicted_cDNA_154|1356_NN ATGGAGCAGATGTTGGGAGCTTTTCAGAGTGACCTCAGCTCCATCAGCTCTGAGATCCGG ACACTGCAGGAACAGTCAGGAGCCATGAACATTCGACTTCGAAATCGCCAGGCAGTTCGG GGGAAACTTGGGGAGCTTGTTGATGGTCTGGTGGTGCCTTCTGCTCTGGTCACGGCAATT CTGGAGGCTCCAGTGACAGAGCCCAGGTTCTTGGAGCAGCTACAGGAGCTGGATGCCAAG GCAGCCGCAGTCAGAGAGCAGGAAGCTAGAGGCACAGCAGCCTGCGCAGATGTCAGAGGC GTGCTCGATCGGCTCCGGGTCAAGGCAGTGACGAAGATCCGAGAGTTTATCCTCCAGAAG ATTTATTCCTTCAGGAAACCCATGACCAACTATCAGATCCCCCAGACGGCCCTGCTGAAG TTCTTCTATCAGTTTCTGCTGGGCAATGAACGAGCAACAGCAAAGGAGATCAGGGATGAA TATGTGGAGACGCTGAGCAAGATTTACCTGTCTTACTACCGCTCTTACCTGGGGCGGCTC ATGAAGGTGCAGTATCCATTTGAGGCCCTCTTCCGCAGCCAGCACTACGCCCTCCTAGAC AATTCCTGCCGCGAATACCTTTTCATCTGTGAATTTTTTGTTGTGTCTGGCCCAGCTGCA CACGACCTGTTCCATGCTGTCATGGGCCGTACACTCAGCATGACCCTGATCACACGCCGC TATGCAGAGTTCTCCTCCGCTCTTGTCAGTATCAACCAGACAATTCCTAATGAACGGACC ATGCAATTGCTGGGACAGCTGCAGGTGGAGGTGGAGAATTTTGTCCTCCGAGTGGCAGCT GAGTTCTCCTCAAGGAAGGAGCAGCTTGTGTTTCTGATCAACAACTATGACATGATGCTG GGTGTGCTGATGGAGCGGGCTGCAGATGACAGCAAAGAGGTTGAGAGCTTCCAGCAGCTG CTCAATGCTCGGACACAGGAATTCATTGAAGAGTTGCTGTCTCCCCCTTTTGGGGGTTTA GTGGCATTTGTGAAGGAGGCTGAGGCTTTGATTGAGCGTGGACAGGCTGAGCGACTTCGA GGGGAAGAAGCCCGGGTAACTCAGCTGATCCGTGGCTTTGGTAGTTCCTGGAAATCATCA GTGGAATCTCTGAGTCAGGATGTAATGCGGAGTTTCACCAACTTCAGAAATGGCACCAGT ATCATTCAGGGAGCGCTGACCCAGCTGATCCAGCTCTATCATCGCTTCCACCGGGTGCTG TCCCAGCCGCAGCTCCGAGCCCTCCCTGCCCGGGCTGAGCTCATCAACATTCACCACCTT ATGGTGGAGCTCAAGAAGCATAAGCCCAACTTCTGA >chr6_cox_hap1_154|geneid_v1.2_predicted_protein_154|452_AA MEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQAVRGKLGELVDGLVVPSALVTAI LEAPVTEPRFLEQLQELDAKAAAVREQEARGTAACADVRGVLDRLRVKAVTKIREFILQK IYSFRKPMTNYQIPQTALLKFFYQFLLGNERATAKEIRDEYVETLSKIYLSYYRSYLGRL MKVQYPFEALFRSQHYALLDNSCREYLFICEFFVVSGPAAHDLFHAVMGRTLSMTLITRR YAEFSSALVSINQTIPNERTMQLLGQLQVEVENFVLRVAAEFSSRKEQLVFLINNYDMML GVLMERAADDSKEVESFQQLLNARTQEFIEELLSPPFGGLVAFVKEAEALIERGQAERLR GEEARVTQLIRGFGSSWKSSVESLSQDVMRSFTNFRNGTSIIQGALTQLIQLYHRFHRVL SQPQLRALPARAELINIHHLMVELKKHKPNF* # Gene 155 (Forward). 7 exons. 208 aa. Score = 12.66 First 4618099 4618231 -1.09 + 0 1 1.33 1.35 5.75 0.00 AA 1: 45 chr6_cox_hap1_155 Internal 4620002 4620036 1.12 + 2 0 6.08 2.91 1.82 0.00 AA 45: 56 chr6_cox_hap1_155 Internal 4620542 4620640 4.71 + 0 0 2.03 5.70 12.69 0.00 AA 57: 89 chr6_cox_hap1_155 Internal 4623711 4623797 1.36 + 0 0 2.28 3.87 6.67 0.00 AA 90:118 chr6_cox_hap1_155 Internal 4623879 4623980 2.17 + 0 0 2.81 1.80 11.01 0.00 AA 119:152 chr6_cox_hap1_155 Internal 4624090 4624181 2.96 + 0 2 3.77 3.02 9.71 0.00 AA 153:183 chr6_cox_hap1_155 Terminal 4624305 4624380 1.43 + 1 0 5.18 0.00 8.30 0.00 AA 183:208 chr6_cox_hap1_155 >chr6_cox_hap1_155|geneid_v1.2_predicted_cDNA_155|624_NN ATGCCATCGCTTACCATCCACTTCATCCAGGATGAATTCATCAGAAGTGATATCCAACTC CCCAAGTTGCAGTGGTTCCTGGAGCCCAGGACCACCCGCCTGGAAAGGGATAAGTTAATG GGAGTAGGGTACGGAGGCCTACACGCCGCCGCTTGTGCTGCAGCCATGTCTCTAGTGATC CCTGAAAAGTTCCAGCATATTTTGCGAGTACTCAACACCAACATCGATGGGCGGCGGAAA ATAGCCTTTGCCATCACTGCCATTAAGGGTGTGGGCCGAAGATATGCTCATGTGGTGTTG AGGAAAGCAGACATTGACCTCACCAAGAGGGCGGGAGAACTCACTGAGGATGAGGTGGAA CGTGTGATCACCATTATGCAGAATCCACGCCAGTACAAGATCCCAGACTGGTTCTTGAAC AGACAGAAGGATGTAAAGGATGGAAAATACAGCCAGGTCCTAGCCAATGGTCTGGACAAC AAGCTCCGTGAAGACCTGGAGCGACTGAAGAAGATTCGGGCCCATAGAGGGCTGCGTCAC TTCTGGGGCCTTCGTGTCCGAGGCCAGCACACCAAGACCACTGGCCGCCGTGGCCGCACC GTGGGTGTGTCCAAGAAGAAATAA >chr6_cox_hap1_155|geneid_v1.2_predicted_protein_155|208_AA MPSLTIHFIQDEFIRSDIQLPKLQWFLEPRTTRLERDKLMGVGYGGLHAAACAAAMSLVI PEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVE RVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRH FWGLRVRGQHTKTTGRRGRTVGVSKKK* # Gene 156 (Forward). 1 exons. 379 aa. Score = 9.06 Single 4625334 4626470 9.06 + 0 0 2.70 0.00 31.10 0.00 AA 1:379 chr6_cox_hap1_156 >chr6_cox_hap1_156|geneid_v1.2_predicted_cDNA_156|1137_NN ATGCAGCTCAGGCTCTTCCGGCGCCTCCTTCTCGCCGCTTTGCTGCTGGTGATCGTCTGG ACCCTCTTCGGGCCTTCGGGGTTGGGGGAGGAGCTGCTGAGCCTCTCACTAGCCTCCCTG CTCCCAGCCCCCGCCTCACCGGGGCCGCCCCTGGCCCTGCCCCGCCTCTTGATCCCCAAC CAGGAAGCTTGCAGTGGTCCCGGGGCCCCTCCCTTCCTGCTCATCCTGGTGTGCACGGCT CCGGAGAACCTGAACCAGAGAAACGCCATTCGGGCTTCGTGGGGCGGGCTGCGCGAGGCC CGGGGGCTCAGGGTACAGACGCTATTCTTGCTGGGAGAGCCGAACGCACAGCACCCCGTG TGGGGTTCCCAGGGGAGTGACCTGGCCTCGGAGTCAGCAGCCCAGGGGGATATCTTGCAG GCCGCCTTCCAGGACTCCTACCGCAACCTCACCCTAAAGACCCTCAGCGGGCTGAACTGG GCTGAGAAACACTGCCCCATGGCCCGATACGTCCTCAAGACGGACGATGATGTGTATGTC AACGTCCCTGAACTGGTATCAGAGCTGGTCTTGCGAGGGGGCCGTTGGGGGCAATGGGAG AGAAGCACGGAACCCCAGAGAGAGGCTGAGCAGGAAGGAGGCCAGGTTTTGCACAGCGAG GAAGTGCCTCTTCTGTACTTGGGCCGGGTGCACTGGCGCGTGAACCCCTCTCGGACACCG GGGGGCAGGCACCGCGTATCAGAGGAGCAGTGGCCTCACACCTGGGGCCCCTTTCCACCC TATGCCTCAGGCACGGGGTATGTGCTGTCAGCGTCTGCTGTGCAGCTCATTCTCAAGGTG GCCAGCCGGGCACCCCTTCTCCCATTAGAGGATGTCTTTGTGGGGGTAAGTGCCCGACGA GGAGGCCTCGCCCCAACACAGTGTGTCAAGCTGGCTGGTGCCACCCACTACCCGCTAGAC CGGTGCTGCTATGGGAAATTCCTGCTGACGTCCCACAGGCTGGACCCCTGGAAGATGCAG GAAGCCTGGAAGCTGGTGGGTGGCTCTGACGGGGAAAGGACTGCGCCCTTTTGCTCCTGG TTCCAGGGAGTCCTGGGCATCCTGCGGTGTCGAGCAATAGCCTGGCTTCAGAGCTGA >chr6_cox_hap1_156|geneid_v1.2_predicted_protein_156|379_AA MQLRLFRRLLLAALLLVIVWTLFGPSGLGEELLSLSLASLLPAPASPGPPLALPRLLIPN QEACSGPGAPPFLLILVCTAPENLNQRNAIRASWGGLREARGLRVQTLFLLGEPNAQHPV WGSQGSDLASESAAQGDILQAAFQDSYRNLTLKTLSGLNWAEKHCPMARYVLKTDDDVYV NVPELVSELVLRGGRWGQWERSTEPQREAEQEGGQVLHSEEVPLLYLGRVHWRVNPSRTP GGRHRVSEEQWPHTWGPFPPYASGTGYVLSASAVQLILKVASRAPLLPLEDVFVGVSARR GGLAPTQCVKLAGATHYPLDRCCYGKFLLTSHRLDPWKMQEAWKLVGGSDGERTAPFCSW FQGVLGILRCRAIAWLQS* # Gene 157 (Reverse). 14 exons. 579 aa. Score = 30.70 Terminal 4627190 4627288 0.84 - 0 0 0.00 4.12 8.43 0.00 AA 547:579 chr6_cox_hap1_157 Internal 4627411 4627524 2.27 - 0 0 1.15 5.58 8.09 0.00 AA 509:546 chr6_cox_hap1_157 Internal 4628342 4628436 5.21 - 2 0 4.03 5.56 11.15 0.00 AA 477:508 chr6_cox_hap1_157 Internal 4628588 4628901 4.43 - 1 1 3.28 5.65 10.17 0.00 AA 372:477 chr6_cox_hap1_157 Internal 4634713 4634812 1.36 - 2 2 2.98 6.99 0.95 0.00 AA 339:372 chr6_cox_hap1_157 Internal 4635009 4635144 1.53 - 0 1 1.41 4.23 7.87 0.00 AA 294:339 chr6_cox_hap1_157 Internal 4635273 4635423 3.60 - 1 0 1.64 6.13 9.86 0.00 AA 243:293 chr6_cox_hap1_157 Internal 4635532 4635636 1.25 - 1 2 1.80 2.09 9.77 0.00 AA 208:243 chr6_cox_hap1_157 Internal 4635883 4635944 2.79 - 0 2 4.19 5.08 5.58 0.00 AA 188:208 chr6_cox_hap1_157 Internal 4636066 4636153 2.12 - 1 0 3.62 4.06 6.30 0.00 AA 158:187 chr6_cox_hap1_157 Internal 4636276 4636388 1.46 - 0 2 4.05 0.42 9.44 0.00 AA 121:158 chr6_cox_hap1_157 Internal 4636532 4636612 2.27 - 0 0 3.48 5.55 4.64 0.00 AA 94:120 chr6_cox_hap1_157 Internal 4636722 4636931 2.19 - 0 0 2.57 -0.36 14.66 0.00 AA 24: 93 chr6_cox_hap1_157 First 4637020 4637088 -0.64 - 0 0 0.90 2.52 5.76 0.00 AA 1: 23 chr6_cox_hap1_157 >chr6_cox_hap1_157|geneid_v1.2_predicted_cDNA_157|1737_NN ATGGAGACAGCCCCCAAGCCGGGCAAGGATGTCCCGCCCAAGAAAGACAAACTTCAGACC AAGAGAAAGAAACCGCGGCGATACTGGGAGGAAGAGACCGTTCCGACCACAGCCGGAGCC TCTCCAGGGCCTCCTCGTAACAAGAAGAATCGGGAGCTCCGTCCTCAGAGACCAAAAAAT GCTTACATCTTAAAGAAGTCTCGGATCTCTAAGAAGCCTCAGGTCCCGAAGAAACCCCGA GAATGGAAGAACCCGGAGTCCCAGCGCGGCTTGTCCGGGGCCCAAGATCCATTCCCAGGC CCCGCCCCCGTCCCTGTGGAAGTGGTCCAGAAGTTCTGTCGCATTGACAAATCCCGAAAG CTACCACATTCTAAAGCCAAAACTCGAAGCCGACTTGAGGTGGCTGAAGCTGAGGAAGAG GAAACAAGTATCAAAGCTGCTCGTTCTGAGCTGCTGCTTGCTGAAGAACCTGGGTTTCTG GAAGGGGAGGATGGGGAAGACACAGCAAAGATATGCCAGGCTGACATTGTGGAGGCTGTG GACATTGCAAGTGCAGCCAAGCACTTTGACTTGAATCTGCGGCAGTTTGGACCCTACAGA CTAAACTACTCTCGAACTGGAAGACACCTGGCTTTTGGAGGGCGCCGAGGTCATGTGGCT GCCCTTGATTGGGTAACAAAGAAGCTTATGTGCGAGATCAACGTCATGGAGGCGGTGCGG GACATCCGGTTTCTCCATTCTGAGGCACTGCTTGCTGTTGCTCAGAACCGCTGGCTCCAC ATCTATGACAATCAGGGCATTGAGCTCCACTGTATCCGCCGCTGTGACCGAGTAACACGG CTTGAGTTCCTGCCCTTCCACTTCCTCCTGGCTACAGCTTCAGAAACAGGGTTTCTAACC TACCTGGATGTGTCAGTGGGGAAGATTGTGGCAGCTCTGAATGCTCGAGCTGGGCGGCTC GATGTTATGAGTCAGAACCCTTACAATGCCGTCATCCATCTCGGACACAGCAATGGTACT GTGTCTTTATGGAGTCCAGCTATGAAGGAGCCACTGGCAAAGATTCTCTGTCATCGTGGT GGGGTCCGGGCTGTGGCAGTAGATTCTACAGGCACGTACATGGCCACCTCTGGCCTAGAC CACCAGCTGAAGATCTTTGACTTGCGAGGGACGTACCAGCCTCTGAGCACTCGGACCCTG CCCCATGGAGCAGGGCACCTGGCCTTCTCCCAGAGGGGACTGCTGGTGGCGGGAATGGGT GACGTTGTCAACATCTGGGCAGGGCAGGGCAAGGCCAGCCCACCCTCCCTTGAACAGCCC TACCTCACCCACCGGCTCTCAGGCCCTGTGCATGGCCTTCAGTTCTGCCCCTTTGAAGAT GTGCTGGGGGTGGGGCACACTGGGGGCATCACCAGCATGCTGGTCCCTGGGGCCGGTGAG CCCAACTTCGATGGCCTGGAGAGTAATCCATACAGAAGCCGGAAGCAGCGCCAGGAGTGG GAGGTGAAGGCCCTGCTAGAGAAGGGCTATGACCCGCAGGCTAAGGCTCCCTTCCAGCCA AAGCCAAAGCAGAAGGGCCGCAGCTCCACGGCAAGCCTGGTGAAGAGGAAGAGGAAGGTC ATGGATGAGGAACACAGGGACAAGGTCCGGCAGAGCCTTCAGCAGCAGCATCATAAGGAG GCGAAGGCCAAGCCCACGGGGGCCCGGCCATCTGCCCTGGACAGATTTGTGCGCTGA >chr6_cox_hap1_157|geneid_v1.2_predicted_protein_157|579_AA METAPKPGKDVPPKKDKLQTKRKKPRRYWEEETVPTTAGASPGPPRNKKNRELRPQRPKN AYILKKSRISKKPQVPKKPREWKNPESQRGLSGAQDPFPGPAPVPVEVVQKFCRIDKSRK LPHSKAKTRSRLEVAEAEEEETSIKAARSELLLAEEPGFLEGEDGEDTAKICQADIVEAV DIASAAKHFDLNLRQFGPYRLNYSRTGRHLAFGGRRGHVAALDWVTKKLMCEINVMEAVR DIRFLHSEALLAVAQNRWLHIYDNQGIELHCIRRCDRVTRLEFLPFHFLLATASETGFLT YLDVSVGKIVAALNARAGRLDVMSQNPYNAVIHLGHSNGTVSLWSPAMKEPLAKILCHRG GVRAVAVDSTGTYMATSGLDHQLKIFDLRGTYQPLSTRTLPHGAGHLAFSQRGLLVAGMG DVVNIWAGQGKASPPSLEQPYLTHRLSGPVHGLQFCPFEDVLGVGHTGGITSMLVPGAGE PNFDGLESNPYRSRKQRQEWEVKALLEKGYDPQAKAPFQPKPKQKGRSSTASLVKRKRKV MDEEHRDKVRQSLQQQHHKEAKAKPTGARPSALDRFVR* # Gene 158 (Forward). 3 exons. 157 aa. Score = 10.16 First 4637775 4637838 5.35 + 0 1 7.84 2.73 10.03 0.00 AA 1: 22 chr6_cox_hap1_158 Internal 4638092 4638368 3.21 + 2 2 4.77 1.22 11.52 0.00 AA 22:114 chr6_cox_hap1_158 Terminal 4638634 4638763 1.60 + 1 0 4.41 0.00 9.88 0.00 AA 114:157 chr6_cox_hap1_158 >chr6_cox_hap1_158|geneid_v1.2_predicted_cDNA_158|471_NN ATGGCGGAGCTGATCCAGAAGAAGCTACAGGGAGAAGTGGAGAAATATCAACAGCTACAG AAGGACTTAAGTAAATCCATGTCGGGGAGGCAGAAACTTGAAGCACAACTAACAGAAAAT AATATCGTGAAAGAGGTGAGGGACTGGGATTTGTGGGGCGAGGAGGGACCTGTACTAGCC ATGGTTCTGATCACATATGTCCCATCCCTCCATCAGGAACTGGCCCTGCTGGATGGGTCC AACGTGGTCTTTAAACTTCTGGGTCCGGTGCTAGTCAAACAGGAGCTGGGGGAGGCTCGG GCCACAGTAGGGAAGAGGCTGGACTATATCACAGCTGAAATTAAGCGATACGAATCCCAG CTTCGGGATCTTGAGCGGCAGTCAGAGCAACAGAGGGAGACCCTTGCTCAGCTGCAGCAG GAGTTCCAGCGGGCCCAGGCAGCAAAGGCAGGGGCTCCTGGCAAGGCCTGA >chr6_cox_hap1_158|geneid_v1.2_predicted_protein_158|157_AA MAELIQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEVRDWDLWGEEGPVLA MVLITYVPSLHQELALLDGSNVVFKLLGPVLVKQELGEARATVGKRLDYITAEIKRYESQ LRDLERQSEQQRETLAQLQQEFQRAQAAKAGAPGKA* # Gene 159 (Reverse). 15 exons. 1225 aa. Score = 45.13 Terminal 4640334 4640462 0.98 - 0 0 0.00 4.46 8.26 0.00 AA 1183:1225 chr6_cox_hap1_159 Internal 4641952 4641984 3.52 - 0 0 4.53 4.88 7.20 0.00 AA 1172:1182 chr6_cox_hap1_159 Internal 4642606 4642680 0.57 - 0 0 2.87 1.50 7.38 0.00 AA 1147:1171 chr6_cox_hap1_159 Internal 4643045 4643129 0.84 - 1 0 3.67 3.54 3.80 0.00 AA 1118:1146 chr6_cox_hap1_159 Internal 4643237 4643340 0.12 - 0 2 1.91 3.59 4.53 0.00 AA 1084:1118 chr6_cox_hap1_159 Internal 4643426 4643464 0.86 - 0 0 3.89 2.47 5.11 0.00 AA 1071:1083 chr6_cox_hap1_159 Internal 4643946 4644243 2.46 - 1 0 3.38 3.35 8.55 0.00 AA 971:1070 chr6_cox_hap1_159 Internal 4644516 4644694 1.72 - 0 2 1.37 5.45 6.57 0.00 AA 912:971 chr6_cox_hap1_159 Internal 4644950 4645033 1.51 - 0 0 2.50 5.58 4.15 0.00 AA 884:911 chr6_cox_hap1_159 Internal 4651882 4651916 1.37 - 2 0 1.84 5.57 4.80 0.00 AA 872:883 chr6_cox_hap1_159 Internal 4652224 4652565 2.58 - 2 1 4.38 4.75 5.26 0.00 AA 758:872 chr6_cox_hap1_159 Internal 4652916 4653314 1.51 - 2 1 1.40 4.28 7.77 0.00 AA 625:758 chr6_cox_hap1_159 Internal 4661610 4661780 2.24 - 2 1 4.18 0.79 10.66 0.00 AA 568:625 chr6_cox_hap1_159 Internal 4663146 4664806 23.93 - 1 1 1.12 1.71 68.06 0.00 AA 14:568 chr6_cox_hap1_159 First 4665608 4665648 0.92 - 0 2 -0.72 7.40 4.76 0.00 AA 1: 14 chr6_cox_hap1_159 >chr6_cox_hap1_159|geneid_v1.2_predicted_cDNA_159|3675_NN ATGGCGGCGGGAGGGGCCCAGGTTGCTGCTCTGGCCGCCGATGGGGCAGCACTTCCCCTG CCGCTGTCGCTGGCTCCGCCCCCACTACCCCTGCCAGCAGCTGCAGTGGTACATGTGTCC TTCCCTGAGGTGACCAGTGCCCTCTTGGAGTCCCTCAATCAGCAGCGTCTGCAGGGCCAG CTCTGCGATGTATCTATCAGAGTGCAGGGCCGGGAGTTCCGGGCTCATCGGGCTGTCCTG GCTGCCTCCTCCCCTTACTTCCATGATCAGGTCCTACTCAAAGGCATGACCTCCATCTCG CTGCCCAGTGTCATGGACCCAGGCGCCTTTGAGACTGTCCTAGCCTCCGCTTACACTGGC CGCCTCAGCATGGCTGCTGCTGACATTGTCAACTTCCTTACAGTGGGGTCTGTGCTCCAA ATGTGGCACATTGTGGACAAGTGCACTGAACTACTCCGAGAAGGCCGGGCCTCAGCTACC ACCACCATCACTACTGCTGCAGCCACCTCTGTCACTGTCCCTGGTGCTGGGGTGCCATCC GGGAGTGGGGGCACTGTGGCCCCTGCTACCATGGGCTCTGCGCGCTCCCATGCCTCCAGC CGGGCCAGTGAGAATCAATCTCCCAGCAGCAGCAACTACTTCAGCCCCAGGGAGTCCACT GATTTCTCATCTTCCTCCCAAGAGGCATTTGCAGCTTCTGCAGTGGGCAGTGGGGAGCGT CGAGGAGGTGGCCCTGTATTCCCAGCCCCTGTCGTTGGCAGTGGAGGGGCCACATCTGGA AAGCTGCTGCTGGAGGCAGATGAGCTGTGCGATGATGGTGGGGATGGGAGGGGGGCAGTG GTTCCTGGGGCTGGGCTCCGGAGACCCACCTACACACCCCCTAGCATCATGCCACAGAAA CACTGGGTATACGTGAAGCGAGGTGGTAATTGCCCAGCGCCAGCACCCCTGGTTCCCCAA GACCCAGATCTGGAGGAGGAAGAGGAGGAGGAAGATCTGGTGTTGACCTGTGAGGATGAT GAAGATGAAGAACTAGGGGGTAGCTCCAGGGTTCCAGTGGGGGGAGGGCCTGAGGCTACC CTCAGCATAAGTGATGTCCGTACCCTGAGTGAGCCCCCAGACAAGGGGGAGGAGCAGGTC AACTTCTGTGAGTCCTCCAATGACTTTGGCCCATATGAGGGTGGGGGTCCTGTGGCAGGT CTTGATGACTCAGGGGGGCCAACTCCCTCTTCCTATGCCCCCTCCCACCCTCCTCGACCG CTCCTTCCCTTGGACATGCAGGGCAACCAGATCCTGGTCTTCCCGTCGTCGTCTTCATCC TCATCCTCACAGGCTCCTGGCCAACCACCAGGGAACCAAGCAGAACACGGGGCAGTGACC GTGGGGGGCACGTCGGTGGGGAGCCTGGGTGTGCCGGGTAGCGTTGGTGGGGTCCCTGGA GGGACTGGCAGTGGGGACGGGAATAAGATCTTTCTGTGCCATTGTGGGAAGGCCTTCTCC CACAAGAGCATGCGGGACCGGCACGTGAACATGCACCTCAATCTGCGGCCGTTTGACTGC CCCGTGTGCAACAAAAAGTTCAAGATGAAGCACCATCTGACTGAGCACATGAAGACGCAC ACAGGTCTCAAGCCCTACGAGTGCGGAGTCTGCGCCAAGAAGTTCATGTGGCGAGACAGC TTCATGCGCCACCGAGGACACTGCCTGGCGACCGCCGTCTCAGCAGGACCCGCGGTGATC GAGTGTTGGTTCGTGGAGGATGCGAGCGGAAAGGGCCTGGCCAAGAGACCCGGTGCACTG CTGTTGCGCCAGGGACCGGGGGAACCGCCGCCCCGGCCGGACCTCGACCCTGAGCTCTAT CTCAGTGTACACGTGGTACTGACTGTCCTCACCCACACCCCTGCCCCTCGAGTGAGACTG GGACAAGATGCTCTGCTGGACTTGAGCTTTGCCTACATGCCCCCCACCTCCGAGGCCGCC TCATCTCTGGCTCCGGGTCCCCCTCCCTTTGGGCTAGAGTGGCGACGCCAGCACCTGGGT AAGGGACATCTGCTCCTGGCTGCAACTCCTGGGCTGAATGGCCAGATGCCAGCAGCCCAA GAAGGGGCCGTGGCATTTGCTGCTTGGGATGATGATGAGCCATGGGGCCCATGGACCGGA AATGGGACCTTCTGGCTGCCTAGAGTTCAACCCTTTCAGGAGGGCACCTATCTGGCCACC ATACACCTGCCATACCTGCAAGGACAGGTCACCCTGGAGCTTGCTGTGTACAAACCCCCC AAAGTGTCCCTGATGCCAGCAACCCTTGCACGGGCCGCCCCAGGGGAGGCACCCCCGGAA TTGCTCTGCCTTGTGTCCCACTTCTACCCTTCTGGGGGCCTGGAGGTGGAGTGGGAACTC CGGGGTGGCCCAGGGGGCCGCTCTCAGAAGGCCGAGGGGCAGAGGTGGCTCTCGGCCCTG CGCCACCATTCCGATGGCTCTGTCAGCCTCTCTGGGCACTTGCAGCCGCCCCCAGTCACC ACTGAGCAGCATGGGGCACGCTATGCCTGTCGAATTCACCATCCCAGCCTGCCTGCCTCG GGGCGCAGCGCTGAGGTCACCCTGGAGGTAGCAGCTGTCTACCTGTCCACCTGCAAGGAT TCAAAGAAGGCCCCTGTGTCCGTCTGGGATGAGGAGGAGGATGGTGCCGTGTTTACCGTC ACAAGCCGCCAATATCGACCTCTTGATCCCTTGGTCCCTATGCCTCCCCCACGTTCCTCC CGACGGCTCCGAGCTGGCACTCTGGAGGCCCTGGTCAGACACCTACTGGATACCCGGACA TCAGGGACTGATGTGAGCTTCATGTCAGCCTTCCTGGCTACCCACCGGGCCTTCACCTCC ACGCCTGCCTTGCTAGGGCTTATGGCTGACAGGGTAGCCATCTCTGTACTGTCAACCTGG CTGGCCTCTCACCCTGAGGATTTTGGCTCTGAGGCCAAGGGTCAGCTTGACCGGCTTGAG AGCTTCTTACTTCAGACAGGGTATGCAGCAGGGAAGGGTGTTGGGGGGGGCAGCGCTGAC CTCATCCGCAATCTCCGGTCCCGGGTGGACCCCCAGGCCCCCGACCTTCCTAAGCCCCTG GCCCTCCCCGGCGATCCCCCTGCTGACCCCACGGATGTCCTGGTGTTCCTCGCTGACCAC TTGGCCGAACAGCTGACCCTGCTAGATGCGAGGGCCCGGCTCCTGGAGAAGTGGATCCGC GTGGCAGAGGAGTGCCGGCTGCTCCGAAACTTCTCTTCAGTTTATGCCGTGGTGTCAGCC CTGCAGTCCAGCCCCATCCACAGGCTTCGGGCAGCCTGGGGGGAAGCAACCAGGGACAGC CTCAGAGTCTTTTCCAGCCTCTGCCAGATTTTCTCCGAGGAGGATAATTATTCCCAGAGT CGGGAGCTGCTCGTGCAGGGTGTGGTCCCATACCTTGGCACCTTCCTGAAGGACCTTGTG ATGCTGGATGCAGCCTCCAAGGATGAGTTGGAGAATGGATACATCAATTTTGACAAGCGG AGGAAGGTGACAAGCCAGGACAAGGCTCCAAGTGTCATCAGTCGTGTCCTTAAGAAAAAC AATCGTGACTCTGCAGTGGCTTCAGAGTATGAGCTGGTACAGCTGCTACCAGGGGAGCGA GGTCAGAGGCCATGA >chr6_cox_hap1_159|geneid_v1.2_predicted_protein_159|1225_AA MAAGGAQVAALAADGAALPLPLSLAPPPLPLPAAAVVHVSFPEVTSALLESLNQQRLQGQ LCDVSIRVQGREFRAHRAVLAASSPYFHDQVLLKGMTSISLPSVMDPGAFETVLASAYTG RLSMAAADIVNFLTVGSVLQMWHIVDKCTELLREGRASATTTITTAAATSVTVPGAGVPS GSGGTVAPATMGSARSHASSRASENQSPSSSNYFSPRESTDFSSSSQEAFAASAVGSGER RGGGPVFPAPVVGSGGATSGKLLLEADELCDDGGDGRGAVVPGAGLRRPTYTPPSIMPQK HWVYVKRGGNCPAPAPLVPQDPDLEEEEEEEDLVLTCEDDEDEELGGSSRVPVGGGPEAT LSISDVRTLSEPPDKGEEQVNFCESSNDFGPYEGGGPVAGLDDSGGPTPSSYAPSHPPRP LLPLDMQGNQILVFPSSSSSSSSQAPGQPPGNQAEHGAVTVGGTSVGSLGVPGSVGGVPG GTGSGDGNKIFLCHCGKAFSHKSMRDRHVNMHLNLRPFDCPVCNKKFKMKHHLTEHMKTH TGLKPYECGVCAKKFMWRDSFMRHRGHCLATAVSAGPAVIECWFVEDASGKGLAKRPGAL LLRQGPGEPPPRPDLDPELYLSVHVVLTVLTHTPAPRVRLGQDALLDLSFAYMPPTSEAA SSLAPGPPPFGLEWRRQHLGKGHLLLAATPGLNGQMPAAQEGAVAFAAWDDDEPWGPWTG NGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVYKPPKVSLMPATLARAAPGEAPPE LLCLVSHFYPSGGLEVEWELRGGPGGRSQKAEGQRWLSALRHHSDGSVSLSGHLQPPPVT TEQHGARYACRIHHPSLPASGRSAEVTLEVAAVYLSTCKDSKKAPVSVWDEEEDGAVFTV TSRQYRPLDPLVPMPPPRSSRRLRAGTLEALVRHLLDTRTSGTDVSFMSAFLATHRAFTS TPALLGLMADRVAISVLSTWLASHPEDFGSEAKGQLDRLESFLLQTGYAAGKGVGGGSAD LIRNLRSRVDPQAPDLPKPLALPGDPPADPTDVLVFLADHLAEQLTLLDARARLLEKWIR VAEECRLLRNFSSVYAVVSALQSSPIHRLRAAWGEATRDSLRVFSSLCQIFSEEDNYSQS RELLVQGVVPYLGTFLKDLVMLDAASKDELENGYINFDKRRKVTSQDKAPSVISRVLKKN NRDSAVASEYELVQLLPGERGQRP* # Gene 160 (Reverse). 6 exons. 668 aa. Score = 44.32 Terminal 4666663 4666722 0.13 - 0 0 0.00 4.73 5.75 0.00 AA 649:668 chr6_cox_hap1_160 Internal 4666917 4667139 0.13 - 1 0 4.64 5.06 -1.72 0.00 AA 574:648 chr6_cox_hap1_160 Internal 4667300 4667774 10.78 - 2 2 2.38 7.59 24.50 0.00 AA 416:574 chr6_cox_hap1_160 Internal 4668305 4668511 3.24 - 2 1 1.78 4.18 11.66 0.00 AA 347:416 chr6_cox_hap1_160 Internal 4668656 4669487 24.32 - 0 1 2.80 -0.30 69.56 0.00 AA 70:347 chr6_cox_hap1_160 First 4669639 4669845 5.71 - 0 0 3.82 1.75 18.43 0.00 AA 1: 69 chr6_cox_hap1_160 >chr6_cox_hap1_160|geneid_v1.2_predicted_cDNA_160|2004_NN ATGGCCACCGCTAACAGCATCATCGTGCTGGATGATGATGACGAAGATGAAGCAGCTGCT CAGCCAGGGCCCTCCCACCCACTCCCCAATGCGGCCTCACCTGGGGCAGAAGCCCCTAGC TCCTCTGAGCCTCATGGGGCCAGAGGAAGCAGTAGTTCGGGCGGCAAGAAATGCTACAAG CTGGAGAATGAGAAGCTGTTCGAAGAGTTCCTTGAACTTTGTAAGATGCAGACAGCAGAC CACCCTGAGGTGGTCCCATTCCTCTATAACCGGCAGCAACGTGCCCACTCTCTGTTTTTG GCCTCGGCGGAGTTCTGCAACATCCTCTCTAGGGTCCTGTCTCGGGCCCGGAGCCGGCCA GCCAAGCTCTATGTCTACATCAATGAGCTCTGCACTGTTCTCAAGGCCCACTCAGCCAAA AAGAAGCTGAACTTGGCCCCTGCCGCCACCACCTCCAATGAGCCCTCTGGGAATAACCCT CCCACACACCTCTCCTTGGACCCCACAAATGCTGAAAACACTGCCTCTCAGTCTCCAAGG ACCCGTGGTTCCCGGCGGCAGATCCAGCGTTTGGAGCAGCTGCTGGCGCTCTATGTGGCA GAGATCCGGCGGCTGCAGGAAAAGGAGTTGGATCTCTCAGAATTGGATGACCCAGACTCC GCATACCTGCAGGAGGCACGGTTGAAGCGTAAGCTGATCCGCCTCTTTGGGCGACTATGT GAGCTGAAAGACTGCTCTTCACTGACCGGCCGTGTCATAGAGCAGCGCATCCCCTACCGT GGCACCCGCTACCCAGAGGTTAACAGGCGCATTGAGCGGCTCATCAACAAGCCAGGGCCT GATACCTTCCCTGACTATGGGGATGTGCTTCGGGCTGTAGAGAAGGCAGCTGCCCGACAC AGCCTTGGCCTCCCCCGACAGCAGCTCCAGCTCATGGCTCAGGATGCCTTCCGAGATGTG GGCATCAGGTTACAGGAGCGACGTCACCTCGATCTCATCTACAACTTTGGCTGCCACCTC ACAGATGACTATAGGCCAGGCGTTGACCCTGCACTATCAGATCCTGTGTTGGCCCGGCGC CTTCGGGAAAACCGGAGTTTGGCCATGAGTCGGCTGGATGAGGTCATCTCCAAATACGCA ATGTTGCAAGACAAAAGTGAGGAGGGCGAGAGAAAAAAGAGAAGAGCTCGGCTCCAAGGC ACCTCTTCCCACTCTGCAGACACCCCCGAAGCCTCCTTGGATTCTGGTAAAGATGGAGAC AAGAGCCCCATGTCCTCACTACAGATCTCCAATGAAAAGAACCTGGAACCTGGCAAACAG ATCAGCAGATCTTCAGGGGAGCAGCAAAACAAAGGACGCATAGTGTCACCATCGTTACTG TCAGAAGAACCCCTGGCCCCCTCCAGCATAGATGCTGAAAGCAATGGAGAACAGCCTGAG GAGCTGACCCTGGAGGAAGAAAGCCCTGTGTCTCAGCTCTTTGAGCTAGAGATTGAAGCT TTGCCCCTGGATACCCCTTCCTCTGTGGAGACGGACATTTCCTCTTCCAGGAAGCAATCA GAGGAGCCCTTCACCACTGTCTTAGAGAATGGAGCAGGCATGGTCTCTTCTACTTCCTTC AATGGAGGCGTCTCTCCTCACAACTGGGGAGATTCTGGTCCCCCCTGCAAAAAATCTCGG AAGGAGAAGAAGCAAACAGGATCAGGGCCATTAGGAAACAGCTATGTGGAAAGGCAAAGG TCAGTGCATGAGAAGAATGGGAAAAAGATATGTACCCTGCCCAGCCCACCTTCCCCCTTG GCTTCCTTGGCCCCAGTTGCTGATTCCTCCACGAGGGTGGACTCTCCCAGCCATGGCCTG GTGACCAGCTCCCTCTGCATCCCTTCTCCAGCCCGGCTGTCCCAAACCCCCCATTCACAG CCTCCTCGGCCTGGTACTTGCAAGACAAGTGTGGCCACACAATGCGATCCAGAAGAGATC ATCGTGCTCTCAGACTCTGATTAG >chr6_cox_hap1_160|geneid_v1.2_predicted_protein_160|668_AA MATANSIIVLDDDDEDEAAAQPGPSHPLPNAASPGAEAPSSSEPHGARGSSSSGGKKCYK LENEKLFEEFLELCKMQTADHPEVVPFLYNRQQRAHSLFLASAEFCNILSRVLSRARSRP AKLYVYINELCTVLKAHSAKKKLNLAPAATTSNEPSGNNPPTHLSLDPTNAENTASQSPR TRGSRRQIQRLEQLLALYVAEIRRLQEKELDLSELDDPDSAYLQEARLKRKLIRLFGRLC ELKDCSSLTGRVIEQRIPYRGTRYPEVNRRIERLINKPGPDTFPDYGDVLRAVEKAAARH SLGLPRQQLQLMAQDAFRDVGIRLQERRHLDLIYNFGCHLTDDYRPGVDPALSDPVLARR LRENRSLAMSRLDEVISKYAMLQDKSEEGERKKRRARLQGTSSHSADTPEASLDSGKDGD KSPMSSLQISNEKNLEPGKQISRSSGEQQNKGRIVSPSLLSEEPLAPSSIDAESNGEQPE ELTLEEESPVSQLFELEIEALPLDTPSSVETDISSSRKQSEEPFTTVLENGAGMVSSTSF NGGVSPHNWGDSGPPCKKSRKEKKQTGSGPLGNSYVERQRSVHEKNGKKICTLPSPPSPL ASLAPVADSSTRVDSPSHGLVTSSLCIPSPARLSQTPHSQPPRPGTCKTSVATQCDPEEI IVLSDSD* # Gene 161 (Reverse). 1 exons. 56 aa. Score = 0.52 Single 4670917 4671084 0.52 - 0 0 0.00 4.40 7.20 0.00 AA 1: 56 chr6_cox_hap1_161 >chr6_cox_hap1_161|geneid_v1.2_predicted_cDNA_161|168_NN ATGGCGGCCCCCAGCTGCTTTGGGACGCCTGGGTTCGGGGAGACAAACTCCGACCTGGAA GAGACCGTTGACTATGTGGGCCGCACTGGAGGTGTTCGCGGGGCGGGCCTACTGCCACCT CCGGCCACAGGAAGCCTGTGTTCCGTACGACAATATGGCGGCGCTTAG >chr6_cox_hap1_161|geneid_v1.2_predicted_protein_161|56_AA MAAPSCFGTPGFGETNSDLEETVDYVGRTGGVRGAGLLPPPATGSLCSVRQYGGA* # Gene 162 (Reverse). 1 exons. 80 aa. Score = 0.67 Single 4676944 4677183 0.67 - 0 0 0.00 3.42 9.05 0.00 AA 1: 80 chr6_cox_hap1_162 >chr6_cox_hap1_162|geneid_v1.2_predicted_cDNA_162|240_NN ATGGCAGAGGAAGGTGATGTGGACGAGGCGGATGTGTTCCTGGCATTTGCCCAGGGTCCC TCCCCTCCCAGGGGTCCCGTGCGACGTGCCTTGGACAAGGCTTTCTTTATCTTCCTGGCC CTCTTCCTGACACTGCTGATGCTGGAGGCTGCTTATAAGCTGCTGTGGTTACTACTATGG GCAAAGTTAGGGGACTGGCTCCTGGGGACACCTCAGAAGGAGGAGGAGCTGGAATTGTGA >chr6_cox_hap1_162|geneid_v1.2_predicted_protein_162|80_AA MAEEGDVDEADVFLAFAQGPSPPRGPVRRALDKAFFIFLALFLTLLMLEAAYKLLWLLLW AKLGDWLLGTPQKEEELEL* # Gene 163 (Forward). 3 exons. 200 aa. Score = 13.75 First 4677849 4677867 -1.55 + 0 1 2.49 2.38 1.32 0.00 AA 1: 7 chr6_cox_hap1_163 Internal 4678714 4678732 -1.51 + 2 2 3.41 1.48 1.41 0.00 AA 7: 13 chr6_cox_hap1_163 Terminal 4686854 4687415 16.81 + 1 0 3.06 0.00 51.31 0.00 AA 13:200 chr6_cox_hap1_163 >chr6_cox_hap1_163|geneid_v1.2_predicted_cDNA_163|600_NN ATGGATCAGCAGGGCAAGGGCATTGGCCTGAAGGTTGGGGCAGCCCACTTCTGGTGTTTG GCGCTGGAATTAAACAACCACCATGTGGAGCAAAAAGGCAAGACCAAGACCACCAAAAAG CGCCCTCAGCGCACAACATCCAACGTGTTTGCCATGTTTGACCAGTCACAGATTCAGGAG TTCAAAGAGGCCTTCAACATGATTGATCAGAACAGAGATGGTTTCATCAACAAAGAAGAT TTGCATGATATGCTTGTTTCCCTAGGGAAGAATCCCACCGATGCATACCTTGATGCCATA ATGAATGAGGCACCAGGGCCCATCGATTTCACCATGTTCCTCACCATATTTGGTGAGAAG TTAAATGGCACAGATCCTGAAGATGTCATTGGAAATGCTTTTGCTTGCTTTGATGAAGAA GCAACAGGCATTATTCAGGAAGATTACCTGAGAGAGCTGCTGATAACCATGTGGGATCGG TTTACGGATGAGGAAGTGGATGAGCTGTACAGAGAAGCGCCTATTAACAAAAAGGGGAAT TTCAATTACATCGAGTTCACATGCATCCTGAAACATGGAGCAAAAGACAAAGACGACTGA >chr6_cox_hap1_163|geneid_v1.2_predicted_protein_163|200_AA MDQQGKGIGLKVGAAHFWCLALELNNHHVEQKGKTKTTKKRPQRTTSNVFAMFDQSQIQE FKEAFNMIDQNRDGFINKEDLHDMLVSLGKNPTDAYLDAIMNEAPGPIDFTMFLTIFGEK LNGTDPEDVIGNAFACFDEEATGIIQEDYLRELLITMWDRFTDEEVDELYREAPINKKGN FNYIEFTCILKHGAKDKDD* # Gene 164 (Reverse). 1 exons. 227 aa. Score = 12.77 Single 4713466 4714146 12.77 - 0 0 0.00 1.37 42.36 0.00 AA 1:227 chr6_cox_hap1_164 >chr6_cox_hap1_164|geneid_v1.2_predicted_cDNA_164|681_NN ATGTCTGTGCCCCTGCTCAACGATGCTGCCACCGTGTCTGGAGCTGAGCGGGAAACGGCC GTGGTTATTTTTTTACATGGACTTGGAGACACAGGGCACAGCTGGGCTGACGCCCTCTCC ACCATTCGGCTCCCTCACGTCAAGTACATCTGTTCCCATGAGCCTAGGATCCCTGTGACC CTCAACATGAAGATGGTGATGCCCTCCTGGTTTGACCTGATGGGGCTGAGTCCAGATGCC CCAGAGGACGAGGCTGGCATCAAGAAGGCAGCAGAGAACATCAAGGCCTTGATTGAGCAT GAAATGAAGAACGGGATCCCTGCCAATCAAATCATCCTGGGAGGCTTTTCACAGGGCCGG GCCCTGTCCCTCTACATGGCCCTCACCTGCCCCCACCCTCTGGCTGGCATCCTGGCTTTG AGCTGCTGGCCGCCTCTGCACCGGGCCTTCCCCCAGGCAGCTAATGGCAGTGCCAAGGAC CTGGCCATCCTCCAGTGCCATGGGGAGCTGGACCCCATGGTGCCCGTACGGTTTGGGGCC CTGATGGCTGAGAAGCTCCGGTCTGTTGTCACACCTGCCAGGGTCCAGTTCCAGACATAC CTGGGTGTCATGCACAGCTCCTGTCCTCAGGAGATGGCAGCTGTGAAGGAATTTCTTGAG AAGCTGCTGCCTCCTGTCTAA >chr6_cox_hap1_164|geneid_v1.2_predicted_protein_164|227_AA MSVPLLNDAATVSGAERETAVVIFLHGLGDTGHSWADALSTIRLPHVKYICSHEPRIPVT LNMKMVMPSWFDLMGLSPDAPEDEAGIKKAAENIKALIEHEMKNGIPANQIILGGFSQGR ALSLYMALTCPHPLAGILALSCWPPLHRAFPQAANGSAKDLAILQCHGELDPMVPVRFGA LMAEKLRSVVTPARVQFQTYLGVMHSSCPQEMAAVKEFLEKLLPPV*