## date Wed Apr 19 14:59:48 2006 ## source-version: geneid v 1.2 -- geneid@imim.es # Sequence chr5_random - Length = 143687 bps # Optimal Gene Structure. 2 genes. Score = 114.65 # Gene 1 (Reverse). 3 exons. 927 aa. Score = 94.34 Terminal 13848 16549 96.97 - 2 0 0.00 3.29 251.35 0.00 AA 27:927 chr5_random_1 Internal 27851 27891 -0.85 - 1 1 2.97 2.11 2.75 0.00 AA 13: 27 chr5_random_1 First 38091 38128 -1.78 - 0 2 1.50 1.84 3.05 0.00 AA 1: 13 chr5_random_1 >chr5_random_1|geneid_v1.2_predicted_cDNA_1|2781_NN ATGGCTACCGGGGAGCTAGACAATAGCATCAGCCACAGGAGTCGCTGCTGCCTGCTAACT CGCCCAGACGTTCTTCGAGTGTCACATTTGAAGACGAGCACTGAGGATGAGGAACCAACT GAAGAATATGAAAATGTTGGAAATGCAGCATCTAAGTGGCCAAAAGTGGAGGATCCTATC CCTGAATCTAAGGTTGGTGACACATGTGTTTGGGATAGCAAGGTAGAGAATCAACAGAAA AAGCCTGTGGAAAACAGGATGAAGGAGGACAAAAGCAGCATCAGGGAAGCAATCAGCAAA GCCAAGAGTACAGCAAATATAAAGACAGAACAGGAAGGTGAGGCATCTGAGAAGAGCTTG CATCTGAGCCCACAGCATATCACACACCAGACTATGCCTATAGGACAGAGAGGCAGTGAG CAAGGCAAACGTGTGGAGAACATTAATGGAACCTCCTACCCTAGTCTACAGCAGAAAACC AATGCTGTTAAGAAATTACATAAATGTGATGAATGTGGGAAATCCTTCAAATATAATTCC CGCCTTGTTCAACATAAAATTATGCACACTGGGGAAAAGCGCTATGAATGTGATGACTGT GGAGGGACTTTCCGGAGCAGCTCGAGCCTTCGGGTCCACAAACGGATCCACACTGGGGAG AAGCCGTACAAGTGTGAGGAATGTGGGAAAGCCTACATGTCCTACTCCAGCCTTATAAAC CACAAAAGCACCCATTCTGGGGAGAAGAACTGTAAATGTGATGAATGTGGAAAATCCTTC AATTATAGCTCTGTTCTGGACCAGCATAAAAGGATCCACACTGGGGAGAAGCCCTATGAA TGTGGTGAGTGTGGGAAGGCCTTCAGGAACAGCTCTGGGCTCAGAGTCCACAAAAGGATC CACACGGGGGAGAAGCCCTATGAATGCGACATCTGTGGGAAAACCTTCAGTAACAGCTCT GGCCTTAGGGTCCATAAAAGGATCCACACAGGTGAGAAACCTTACGAATGTGATGAGTGT GGGAAGGCCTTCATTACTTGTAGAACACTTCTCAACCATAAAAGCATCCACTTTGGAGAT AAACCCTATAAATGTGATGAGTGTGAGAAATCTTTTAATTATAGCTCTCTTCTCATTCAG CATAAAGTCATCCACACTGGAGAGAAACCTTATGAATGTGATGAATGTGGGAAGGCTTTC AGGAACAGCTCAGGCCTCATAGTGCATAAAAGGATCCACACAGGAGAGAAACCTTACAAG TGTGATGTCTGTGGCAAAGCATTCAGCTATAGCTCAGGCCTCGCAGTCCATAAAAGCATT CACCCTGGGAAGAAAGCCCATGAATGTAAGGAGTGTGGGAAATCCTTTAGTTATAACTCA CTACTTCTTCAACACAGAACTATTCATACCGGAGAGAGACCTTATGTATGTGATGTGTGT GGGAAAACGTTCAGAAACAATGCAGGCCTCAAAGTCCACAGGAGGCTCCATACTGGGGAA AAACCATATAAGTGTGATGTGTGTGGGAAAGCCTATATCTCACGCTCTAGCCTTAAAAAT CACAAAGGAATCCACCTTGGGGAGAAGCCCTATAAATGTAGCTATTGTGAGAAATCCTTC AACTACAGCTCTGCCCTTGAACAGCATAAAAGGATTCATACCAGGGAAAAACCCTTTGGG TGTGATGAGTGTGGTAAAGCTTTCAGAAATAATTCTGGCCTTAAAGTACATAAACGAATC CACACTGGGGAACGACCTTACAAATGTGAAGAATGTGGGAAAGCATACATCTCTCTCTCG AGCCTTATAAATCATAAAAGTGTACACCCTGGGGAGAAGCCCTTTAAGTGTGACGAGTGT GAGAAGGCCTTCATCACATACCGAACCCTTACAAACCACAAAAAAGTTCATCTTGGGGAG AAGCCCTACAAATGTGATGTGTGTGAGAAATCTTTTAATTACACATCGCTCCTTTCTCAG CACAGAAGGGTCCACACTAGAGAGAAACCCTATGAATGTGACAGGTGTGAGAAGGTCTTC AGAAACAACTCAAGCCTTAAAGTTCATAAAAGAATCCATACTGGGGAGAGGCCCTATGAA TGTGATGTGTGTGGAAAAGCCTACATCTCACACTCAAGCCTTATTAACCATAAGAGTACC CACCCTGGCAAGACACCCCATACATGTGATGAATGTGGAAAAGCTTTTTTCTCAAGCAGA ACTCTTATAAGCCATAAAAGAGTCCATCTTGGGGAGAAACCCTTCAAGTGTGTTGAGTGT GGGAAATCTTTCAGTTACAGCTCTCTCCTTTCTCAGCACAAGAGGATCCACACAGGGGAG AAACCCTATGTGTGTGATAGGTGTGGGAAGGCCTTCAGGAACAGCTCAGGCCTCACAGTG CATAAAAGGATCCACACAGGTGAGAAACCCTATGAATGTGATGAGTGTGGGAAGGCATAC ATCTCACACTCAAGTCTTATCAATCATAAAAGTGTCCACCAGGGGAAGCAGCCCTATAAT TGTGAGTGTGGGAAATCCTTCAATTATAGATCAGTCCTTGACCAGCACAAAAGGATCCAC ACTGGAAAGAAGCCATACCGATGTAATGAGTGTGGTAAGGCTTTTAATATCAGATCAAAT CTCACCAAGCATAAAAGAACCCATACTGGAGAGGAATCTTTAAATGTGATATATGTGGGA AGTTATAGTGGCACATCCCAGAAGAGAACCTATGAGGGAGGGAATGCCCTGGATGGGGGC AGGATGAGGATGCCTCTGTAG >chr5_random_1|geneid_v1.2_predicted_protein_1|927_AA MATGELDNSISHRSRCCLLTRPDVLRVSHLKTSTEDEEPTEEYENVGNAASKWPKVEDPI PESKVGDTCVWDSKVENQQKKPVENRMKEDKSSIREAISKAKSTANIKTEQEGEASEKSL HLSPQHITHQTMPIGQRGSEQGKRVENINGTSYPSLQQKTNAVKKLHKCDECGKSFKYNS RLVQHKIMHTGEKRYECDDCGGTFRSSSSLRVHKRIHTGEKPYKCEECGKAYMSYSSLIN HKSTHSGEKNCKCDECGKSFNYSSVLDQHKRIHTGEKPYECGECGKAFRNSSGLRVHKRI HTGEKPYECDICGKTFSNSSGLRVHKRIHTGEKPYECDECGKAFITCRTLLNHKSIHFGD KPYKCDECEKSFNYSSLLIQHKVIHTGEKPYECDECGKAFRNSSGLIVHKRIHTGEKPYK CDVCGKAFSYSSGLAVHKSIHPGKKAHECKECGKSFSYNSLLLQHRTIHTGERPYVCDVC GKTFRNNAGLKVHRRLHTGEKPYKCDVCGKAYISRSSLKNHKGIHLGEKPYKCSYCEKSF NYSSALEQHKRIHTREKPFGCDECGKAFRNNSGLKVHKRIHTGERPYKCEECGKAYISLS SLINHKSVHPGEKPFKCDECEKAFITYRTLTNHKKVHLGEKPYKCDVCEKSFNYTSLLSQ HRRVHTREKPYECDRCEKVFRNNSSLKVHKRIHTGERPYECDVCGKAYISHSSLINHKST HPGKTPHTCDECGKAFFSSRTLISHKRVHLGEKPFKCVECGKSFSYSSLLSQHKRIHTGE KPYVCDRCGKAFRNSSGLTVHKRIHTGEKPYECDECGKAYISHSSLINHKSVHQGKQPYN CECGKSFNYRSVLDQHKRIHTGKKPYRCNECGKAFNIRSNLTKHKRTHTGEESLNVIYVG SYSGTSQKRTYEGGNALDGGRMRMPL* # Gene 2 (Forward). 6 exons. 484 aa. Score = 20.31 First 64341 64389 -1.89 + 0 1 0.79 4.36 1.43 0.00 AA 1: 17 chr5_random_2 Internal 73615 73962 6.41 + 2 1 6.32 2.09 17.28 0.00 AA 17:133 chr5_random_2 Internal 76368 76643 6.50 + 2 1 5.52 5.38 13.77 0.00 AA 133:225 chr5_random_2 Internal 113387 113407 1.98 + 2 1 4.95 4.98 2.56 0.00 AA 225:232 chr5_random_2 Internal 114936 115523 4.95 + 2 1 0.52 1.52 21.81 0.00 AA 232:428 chr5_random_2 Internal 135344 135513 2.36 + 2 0 3.84 1.01 11.13 0.00 AA 428:484 chr5_random_2 >chr5_random_2|geneid_v1.2_predicted_cDNA_2|1452_NN ATGGCTCTCATGCTCAGTTTGGTTCTGAGTCTCCTCAAGCTGGGATCAGGGCAGTGGCAG GTGTTTGGGCCAGACAAGCCTGTCCAGGCCTTGGTGGGGGAGGACGCAGCATTCTCCTGT TTCCTGTCTCCTAAAACCAATGCAGAGGCCATGGAAGTGCGGTTCTTCAGGGGCCAGTTC TCTAGCGTGGTCCACCTCTACAGGGACGGGAAGGACCAGCCATTTATGCAGATGCCACAG TATCAAGGCAGGACAAAACTGGTGAAGGATTCTATTGCGGAGGGGCGCATCTCTCTGAGG CTGGAAAACATTACTGTGTTGGATGCTGGCCTCTATGGGTGCAGGATTAGTTCCCAGTCT TACTACCAGAAGGCCATCTGGGAGCTACAGGTGTCAGCACTGGGCTCAGTTCCTCTCATT TCCATCACGGGATATGTTGATAGAGACATCCAGCTACTCTGTCAGTCCTCGGGCTGGTTC CCCCGGCCCACAGCGAAGTGGAAAGGTCCACAAGGACAGGATTTGTCCACAGACTCCAGG ACAAACAGAGACATGCATGGCCTGTTTGATGTGGAGATCTCTCTGACCGTCCAAGAGAAC GCCGGGAGCATATCCTGTTCCATGCGGCATGCTCATCTGAGCCGAGAGGTGGAATCCAGG GTACAGATAGGAGGGAAAATCCAGGCGGAACTGGTGGAGGTGACTCTGGATCCAGAGACG GCTCACCCGAAGCTCTGCGTTTCTGATCTGAAAACTGTAACCGAGAGAAAAGCTCCCCAG GAGGTGCCTCACTCTGAGAAGAGATTTAAAAGGAAGAGTGTGGTGGCTTCTCAGAGTTTC CAAGCAGGGAAACATTACTGGGAGGTGGACGGAGGACACAATAAAAGGTGGCGCGTGGGA GTGTGCCGGGATGATGTGGACAGGAGGAAGGAGTACGTGACTTTGTCTCCCGATCATGGG TACTGGGTCCTCAGACTGAATGGAGAACATTTGTATTTCACATTAAATCCCCGTTTTATC AGCGTCTTCCCCAGGACCCCACCTACAAAAATAGGGGTCTTCCTGGACTATGAGTGTGGG ACCATCTCCTTCTTCAACATAAATGACCAGTCCCTTATTTATACCCTGACATGTCGGTTT GAAGGCTTATTGAGGCCCTACATTGAGTATCCGTCCTATAATGAGCAAAATGGAACTCCC ATAGTCATCTGCCCAGTCACCCAGGAATCAGAGAAAGAGGCCTCTTGGCAAAGGGCCTCT GCAATCCCAGAGACAAGCAACAGCTTTGCCCGCGACCGAACAGGGCGAGCAGGCATTTTC CTTCACGTAGGCCTGAAAAGCCACGTCACCCGCATCCCTGAAGGCGGCCCCACCAGCGAC TACGGCTTGGGCTCCACGGCGCGCTCTGCCAGGGACCCCCCCCCCGCCACCGCCGGTGCC CGAGTGGGCCGC >chr5_random_2|geneid_v1.2_predicted_protein_2|484_AA MALMLSLVLSLLKLGSGQWQVFGPDKPVQALVGEDAAFSCFLSPKTNAEAMEVRFFRGQF SSVVHLYRDGKDQPFMQMPQYQGRTKLVKDSIAEGRISLRLENITVLDAGLYGCRISSQS YYQKAIWELQVSALGSVPLISITGYVDRDIQLLCQSSGWFPRPTAKWKGPQGQDLSTDSR TNRDMHGLFDVEISLTVQENAGSISCSMRHAHLSREVESRVQIGGKIQAELVEVTLDPET AHPKLCVSDLKTVTERKAPQEVPHSEKRFKRKSVVASQSFQAGKHYWEVDGGHNKRWRVG VCRDDVDRRKEYVTLSPDHGYWVLRLNGEHLYFTLNPRFISVFPRTPPTKIGVFLDYECG TISFFNINDQSLIYTLTCRFEGLLRPYIEYPSYNEQNGTPIVICPVTQESEKEASWQRAS AIPETSNSFARDRTGRAGIFLHVGLKSHVTRIPEGGPTSDYGLGSTARSARDPPPATAGA RVGR