## date Wed Apr 19 14:29:11 2006 ## source-version: geneid v 1.2 -- geneid@imim.es # Sequence chr22_random - Length = 257318 bps # Optimal Gene Structure. 6 genes. Score = 88.72 # Gene 1 (Forward). 4 exons. 319 aa. Score = 39.48 Internal 3511 3643 1.46 + 0 1 5.28 2.00 5.21 0.00 AA 1: 45 chr22_random_1 Internal 13713 13775 0.36 + 2 1 3.79 2.79 3.53 0.00 AA 45: 66 chr22_random_1 Internal 13963 14119 3.08 + 2 2 2.95 1.99 12.79 0.00 AA 66:118 chr22_random_1 Terminal 14709 15312 34.59 + 1 0 3.04 0.00 94.42 0.00 AA 118:319 chr22_random_1 >chr22_random_1|geneid_v1.2_predicted_cDNA_1|957_NN GTACAGCTGGATAACTTGCCAGGAATGAGTCTCGTGGCTGGGAAAGCACTTAGCTCTGCC CGGATGTCGGATGCAGTTCTCAGTCAGTCTTCGCTCATGGGCAGCCAGCAGTTTCAGGAT GGGGAAAATGAGGGTCCCCCACGGCCCTTCAGGATGAAAGCTGCGGTGCTGACCTTGGCC GTGCTCTTCCTGACGGGGAGCCAGGCTCGGCATTTCTGGCAGCAAGATGAACCCCCCCAG AGCCCCTGGGATCGAGTGAAGGACCTGGCCACTGTGTACGTGGATGTGCTCAAAGACAGC GGCAGAGACTATGTGTCCCAGTTTGAAGGCTCCGCCTTGGGAAAACAGCTAAACCTAAAG CTCCTTGACAACTGGGACAGCGTGACCTCCACCTTCAGCAAGCTGCGCGAACAGCTCGGC CCTGTGACCCAGGAGTTCTGGGATAACCTGGAAAAGGAGACAGAGGGCCTGAGGCAGGAG ATGAGCAAGGATCTGGAGGAGGTGAAGGCCAAGGTGCAGCCCTACCTGGACGACTTCCAG AAGAAGTGGCAGGAGGAGATGGAGCTCTACCGCCAGAAGGTGGAGCCGCTGCGCGCAGAG CTCCAAGAGGGCGCGCGCCAGAAGCTGCACGAGCTGCAAGAGAAGCTGAGCCCACTGGGC GAGGAGATGCGCGACCGCGCGCGCGCCCATGTGGACGCGCTGCGCACGCATCTGGCCCCC TACAGCGACGAGCTGCGCCAGCGCTTGGCCGCGCGCCTTGAGGCTCTCAAGGAGAACGGC GGCGCCAGACTGGCCGAGTACCACGCCAAGGCCACCGAGCATCTGAGCACGCTCAGCGAG AAGGCCAAGCCCGCGCTCGAGGACCTCCGCCAAGGCCTGCTGCCCGTGCTGGAGAGCTTC AAGGTCAGCTTCCTGAGCGCTCTCGAGGAGTACACTAAGAAGCTCAACACCCAGTGA >chr22_random_1|geneid_v1.2_predicted_protein_1|319_AA VQLDNLPGMSLVAGKALSSARMSDAVLSQSSLMGSQQFQDGENEGPPRPFRMKAAVLTLA VLFLTGSQARHFWQQDEPPQSPWDRVKDLATVYVDVLKDSGRDYVSQFEGSALGKQLNLK LLDNWDSVTSTFSKLREQLGPVTQEFWDNLEKETEGLRQEMSKDLEEVKAKVQPYLDDFQ KKWQEEMELYRQKVEPLRAELQEGARQKLHELQEKLSPLGEEMRDRARAHVDALRTHLAP YSDELRQRLAARLEALKENGGARLAEYHAKATEHLSTLSEKAKPALEDLRQGLLPVLESF KVSFLSALEEYTKKLNTQ* # Gene 2 (Reverse). 2 exons. 69 aa. Score = 0.43 Terminal 18237 18357 -0.74 - 1 0 0.00 1.29 8.72 0.00 AA 29: 69 chr22_random_2 First 20219 20304 1.17 - 0 2 1.50 -0.20 13.48 0.00 AA 1: 29 chr22_random_2 >chr22_random_2|geneid_v1.2_predicted_cDNA_2|207_NN ATGCAGGGCTACATGAAGCACGCCACCAAGACCGCCAAGGATGCACTGAGCAGCGTGCAG GAGTCCCAGGTGGCCCAGCAGGCCAGGGGCTGGGTGACCGATGGCTTCAGTTCCCTGAAA GACTACTGGAGCACCGTTAAGGACAAGTTCTCTGAGTTCTGGGATTTGGACCCTGAGGTC AGACCAACTTCAGCCGTGGCTGCCTGA >chr22_random_2|geneid_v1.2_predicted_protein_2|69_AA MQGYMKHATKTAKDALSSVQESQVAQQARGWVTDGFSSLKDYWSTVKDKFSEFWDLDPEV RPTSAVAA* # Gene 3 (Forward). 2 exons. 60 aa. Score = 3.51 First 27917 27965 1.85 + 0 1 1.91 4.32 7.78 0.00 AA 1: 17 chr22_random_3 Terminal 28323 28453 1.66 + 2 0 2.50 0.00 12.90 0.00 AA 17: 60 chr22_random_3 >chr22_random_3|geneid_v1.2_predicted_cDNA_3|180_NN ATGTTCCTGAAGGCCGTGGTCCTGACCCTGGCCCTGGTGGCTGTCGCCGGAGCCAGGGCT GAGGTCAGTGCTGACCAGGTGGCCACAGTGATGTGGGACTACTTCAGCCAGCTGAGCAAC AATGCCAAGGAGGCCGTGGAACATCTCCAGAAATCTGAACTCACCCAGCAACTCAAGTAA >chr22_random_3|geneid_v1.2_predicted_protein_3|60_AA MFLKAVVLTLALVAVAGARAEVSADQVATVMWDYFSQLSNNAKEAVEHLQKSELTQQLK* # Gene 4 (Forward). 2 exons. 217 aa. Score = 27.98 First 29540 30100 30.25 + 0 0 1.24 -0.84 87.53 0.00 AA 1:187 chr22_random_4 Terminal 38451 38540 -2.28 + 0 0 3.41 0.00 3.06 0.00 AA 188:217 chr22_random_4 >chr22_random_4|geneid_v1.2_predicted_cDNA_4|651_NN ATGGAGAGAGTGCTGCGGGAGAACGCCGACAGCCTGCAGGCCTCGCTGAGGCCCCACGCC GACGAGCTCAAGGCCAAGATCGACCAGAACGTGGAGGAGCTCAAGGGACGCCTTACGCCC TACGCTGACGAATTCAAAGTCAAGATTGACCAGACCGTGGAGGAGCTGCGCCGCAGCCTG GCTCCCTATGCTCAGGACACGCAGGAGAAGCTCAACCACCAGCTTGAGGGCCTGACCTTC CAGATGAAGAAGAACGCCGAGGAGCTCAAGGCCAGGATCTCGGCCAGTGCCGAGGAGCTG CGGCAGAGGCTGGCGCCCTTGGCCGAGGACGTGCGTGGCAACCTGAGGGGCAACACCGAG GGGCTGCAGAAGTCACTGGCAGAGCTGGGTGGGCACCTGGACCAGCAGGTGGAGGAGTTC CGACGCCGGGTGGAGCCCTACGGGGAAAACTTCAACAAAGCCCTGGTGCAGCAGATGGAA CAGCTCAGGCAGAAACTGGGCCCCCATGCGGGGGACGTGGAAGGCCACTTGAGCTTCCTG GAGAAGGACCTGAGGGACAAGAATAATTATTCCTTTATACATGCATTCTACGTACAGGAA ATCTTCCCACAGACTCATTCATGGAACCCCAAACCATATGGAGAAAATTGA >chr22_random_4|geneid_v1.2_predicted_protein_4|217_AA MERVLRENADSLQASLRPHADELKAKIDQNVEELKGRLTPYADEFKVKIDQTVEELRRSL APYAQDTQEKLNHQLEGLTFQMKKNAEELKARISASAEELRQRLAPLAEDVRGNLRGNTE GLQKSLAELGGHLDQQVEEFRRRVEPYGENFNKALVQQMEQLRQKLGPHAGDVEGHLSFL EKDLRDKNNYSFIHAFYVQEIFPQTHSWNPKPYGEN* # Gene 5 (Forward). 7 exons. 388 aa. Score = 12.22 First 193112 193203 -1.11 + 0 2 1.15 2.73 3.91 0.00 AA 1: 31 chr22_random_5 Internal 197974 198151 3.06 + 1 0 2.40 1.63 15.47 0.00 AA 31: 90 chr22_random_5 Internal 203290 203339 -2.03 + 0 2 -0.32 3.28 4.35 0.00 AA 91:107 chr22_random_5 Internal 205989 206044 1.48 + 1 1 2.51 4.92 6.41 0.00 AA 107:126 chr22_random_5 Internal 212973 213003 0.89 + 2 2 4.65 4.27 2.72 0.00 AA 126:136 chr22_random_5 Internal 236688 236762 1.10 + 1 2 2.80 5.51 4.15 0.00 AA 136:161 chr22_random_5 Terminal 239632 240313 8.84 + 1 0 -3.14 0.00 40.70 0.00 AA 161:388 chr22_random_5 >chr22_random_5|geneid_v1.2_predicted_cDNA_5|1164_NN ATGCACTTGACCCTGAGGACATCAGGTACCAGGCCCGCCAGCTCACACCATCATCGGAGC CGCAGCTGCAGTCTAGACGTGGTGCACCGGCAACAGGCTGTCCATTGCCAGGAAGAGGCT TGCACTGTTATTCTGCTGGAACATGGCACCAATCCAAACCTTAAGGATATCTACCGCAAC ACTGCTCTCCATTATGCTGTGTATAGTGAGAGCACCTCACTGGCAGAAAAACTGCATTTC CATGGTGCAAATATTGAAGCACTGGACAAGACGTGTGGACGAGATGCAGAAGATTACACT ATTTCTCATCATTTGACAAAAATTCAACAACAAATTTTGGAACGTAAAAAGAAGATACTT AAAAAGGAGAAACGAGATGTTGAAATTTCTGATGAATCTGCAGTCAGATTAACCAAACAA AGAAAGATTGGGAAAATGTATCCTCAGCAATTTCCCAAGAAACTGAAGGAAGAGCACGAT AGAAAAACAAATGCTGCCCTTGTAAAGTATATAAAACTCAATGAGGAATTGATAACAAAA ACAGCATTCTGGTATCAACAAGAGCTTAATGATGTCAAAGCTGAGAATACAAGGCTCAAT TCCGAACTGTTGAAGGAAGAAGAAAGCAACAAAAGACTGGAAGCTGAAACTGAATCTTAT CAGTCTAGACTGGCTGCTACTATAAGTAAACACAGTGAAAGTGTGAAAACAGAAAGAAAC CTAAAACTTGCTTTAGAGAGAACGCAAGATGTTTCCGTACAAGTAAAAATGAGTTCTGAT ATTTCCGAAGTAGAAGATAAGAATGAGTTTCTTACTGAACAACTTTCTAAAACACAAAAT AAATTCAATACCTTAAAAGATAAGTTCCGTAAGACAAGAGATACTCTCAGAAAAAAGTCA TTGGCTTCAGAAACTGTACAAAACGACCTAAGCCAAACACAGCAGCAAATAAAGGAAATG AAAGAGATGTATCAAAATGCAGAAGCTAAAGTGGGTAATTCCACTGGAAAGTGGAGCTGT GTAGAAGAGAGGATATGTCAATTCCAACATGAAAATCCGTGCATTGAACAGCAACTAGAT GATGTTCATCAGAAAGAGTATCATAAAGAGATAGTAACTAATATCCAAAGAGGCTTTATT GAGAGTGGAAAGACCTCGTGCTAG >chr22_random_5|geneid_v1.2_predicted_protein_5|388_AA MHLTLRTSGTRPASSHHHRSRSCSLDVVHRQQAVHCQEEACTVILLEHGTNPNLKDIYRN TALHYAVYSESTSLAEKLHFHGANIEALDKTCGRDAEDYTISHHLTKIQQQILERKKKIL KKEKRDVEISDESAVRLTKQRKIGKMYPQQFPKKLKEEHDRKTNAALVKYIKLNEELITK TAFWYQQELNDVKAENTRLNSELLKEEESNKRLEAETESYQSRLAATISKHSESVKTERN LKLALERTQDVSVQVKMSSDISEVEDKNEFLTEQLSKTQNKFNTLKDKFRKTRDTLRKKS LASETVQNDLSQTQQQIKEMKEMYQNAEAKVGNSTGKWSCVEERICQFQHENPCIEQQLD DVHQKEYHKEIVTNIQRGFIESGKTSC* # Gene 6 (Forward). 1 exons. 96 aa. Score = 5.10 First 256607 256894 5.10 + 0 0 -0.40 5.10 19.56 0.00 AA 1: 96 chr22_random_6 >chr22_random_6|geneid_v1.2_predicted_cDNA_6|288_NN ATGGCAGAGGAGGAAGCTGTATCTTCAAAATGTGTCAATTTGTCTAAAGACAATCAAGTT ATCCAACAGGAGTTATTATCTATGAAAAAAGTACAACAAGAATGTGAAAAACTTGAGGAG AATCAAAAGATGTTGGAAGAAGAAATATTAAATCTTAAGACACATATGGAAAACAGTATG GTAGAACTTAGTAAACTACAAGAATATAAATCAGAGCTAGATGAAAGGGCAATGCAGGCA GTAGAAAAATTAAAAGAAATCCATTTACAGGTTACTTGTTTAAATCAG >chr22_random_6|geneid_v1.2_predicted_protein_6|96_AA MAEEEAVSSKCVNLSKDNQVIQQELLSMKKVQQECEKLEENQKMLEEEILNLKTHMENSM VELSKLQEYKSELDERAMQAVEKLKEIHLQVTCLNQ