## date Wed Apr 19 13:55:42 2006 ## source-version: geneid v 1.2 -- geneid@imim.es # Sequence chr16_random - Length = 105485 bps # Optimal Gene Structure. 4 genes. Score = 62.13 # Gene 1 (Reverse). 1 exons. 79 aa. Score = 2.66 First 43229 43465 2.66 - 0 0 1.66 1.02 15.12 0.00 AA 1: 79 chr16_random_1 >chr16_random_1|geneid_v1.2_predicted_cDNA_1|237_NN ATGCTGGTCCTGGCCACCCTGGCTGCGCTCTTCATCCTCACCACCGCTGTGTTGGCTGAA CGCCTGTTCCGCCGTGCTCTCCGCCCAGACCCCAGCCACCGTGCACCCACCCTGGTGTGG CGCCCAGGAGGAGAGCTGTGGATTGAGCCCATGGGCACCGCCCGAGAGCGCTCTGAGGAC TGGTATGGCTCTGCGGTCCCCCTGCTGACAGATCGGGCCCCTGAGCCTCCCACCCAG >chr16_random_1|geneid_v1.2_predicted_protein_1|79_AA MLVLATLAALFILTTAVLAERLFRRALRPDPSHRAPTLVWRPGGELWIEPMGTARERSED WYGSAVPLLTDRAPEPPTQ # Gene 2 (Forward). 3 exons. 156 aa. Score = 8.61 First 73460 73478 -3.06 + 0 1 2.75 0.30 0.26 0.00 AA 1: 7 chr16_random_2 Internal 78122 78254 2.69 + 2 2 3.47 2.62 10.10 0.00 AA 7: 51 chr16_random_2 Terminal 78721 79036 8.98 + 1 0 4.46 0.00 28.27 0.00 AA 51:156 chr16_random_2 >chr16_random_2|geneid_v1.2_predicted_cDNA_2|468_NN ATGAGGGCGTTCTTCCAAGTTCAGGCCAGGTCTTCCTCCTATAGTGGAGAGTATGGAAGT GGTGGTGGAAAGCGATTCTCTCATTCTGGCAACCAGTTGGACGGCCCCATCACCGCCCTC CGGGTCCGAGTCAACACATACTACATCGTAGGTCTTCAGGTGCGCTATGGCAAGGTGTGG AGCGACTATGTGGGTGGTCGCAACGGAGACCTGGAGGAGATCTTTCTGCACCCTGGGGAA TCAGTGATCCAGGTTTCTGGGAAGTACAAGTGGTACCTGAAGAAGCTGGTATTTGTGACA GACAAGGGCCGCTATCTGTCTTTTGGGAAAGACAGTGGCACAAGTTTCAATGCCGTCCCC TTGCACCCCAACACCGTGCTCCGCTTCATCAGTGGCCGGTCTGGTTCTCTCATCGATGCC ATTGGCCTGCACTGGGATGTTTACCCCACTAGCTGCAGCAGATGCTGA >chr16_random_2|geneid_v1.2_predicted_protein_2|156_AA MRAFFQVQARSSSYSGEYGSGGGKRFSHSGNQLDGPITALRVRVNTYYIVGLQVRYGKVW SDYVGGRNGDLEEIFLHPGESVIQVSGKYKWYLKKLVFVTDKGRYLSFGKDSGTSFNAVP LHPNTVLRFISGRSGSLIDAIGLHWDVYPTSCSRC* # Gene 3 (Forward). 6 exons. 291 aa. Score = 18.71 First 89398 89467 1.30 + 0 1 3.23 2.11 7.73 0.00 AA 1: 24 chr16_random_3 Internal 95545 95740 1.93 + 2 2 3.51 0.66 11.08 0.00 AA 24: 89 chr16_random_3 Internal 97022 97149 3.07 + 1 1 7.95 2.00 5.25 0.00 AA 89:132 chr16_random_3 Internal 97241 97395 2.81 + 2 0 4.39 4.03 6.89 0.00 AA 132:183 chr16_random_3 Internal 97623 97832 6.16 + 0 0 3.42 4.03 16.72 0.00 AA 184:253 chr16_random_3 Terminal 97912 98025 3.44 + 0 0 5.22 0.00 13.26 0.00 AA 254:291 chr16_random_3 >chr16_random_3|geneid_v1.2_predicted_cDNA_3|873_NN ATGGCCGCGGGCGGCTCGACGCAGCAGAGGCGACGCGAGATGGCGGCAGCTTCAGCGGCG GCGATCTCAGGAGCTGGTCGCTGTCGGCTAAGCAAGATTGGAGCTACTCGTCGTCCACCT CCAGCTCGCGTAAGGGTGGCTGTGCGACTGCGGCCATTTGTGGATGGAACAGCGGGAGCA AGTGATCCCCCCTGTGTGCGGGGCATGGACAGCTGCTCTCTAGAGATTGCTAACTGGAGG AACCACCAGGAGACTCTCAAATACCAGTTTGATGCCTTCTATGGGGAGAGGAGTACTCAG CAGGACATCTATGCAGGTTCAGTGCAGCCCATCCTAAGGCACTTGCTGGAAGGGCAGAAT GCCAGTGTGCTTGCCTATGGACCCACAGGAGCTGGGAAGACGCACACAATGCTGGGCAGC CCAGAGCAACCTGGGGTGATCCCGCGGGCTCTCATGGACCTCCTGCAGCTCACAAGGGAG GAGGGTGCCGAGGGCCGGCCATGGGCCCTTTCTGTCACCATGTCTTACCTAGAGATCTAC CAGGAGAAGGTATTAGACCTCCTGGACCCTGCTTCGGGAGACCTGGTAATCCGAGAAGAC TGCCGGGGGAATATCCTGATTCCGGGTCTCTCCCAGAAGCCCATCAGTAGCTTTGCTGAT TTTGAGCGGCACTTCCTGCCAGCCAGTCGAAATCGGACTGTAGGAGCCACCCGGCTCAAC CAGCGCTCCTCCCGCAGTCATGCTGTGCTCCTGGTCAAGGTGGACCAGCGGGAACGTTTG GCCCCATTTCGCCAGCGAGAGGGAAAACTCTACCTGATTGACTTGGCTGGGTCAGAGGAC AACCGGCGCACAGGCAACAAGGCCTTCGGCTAA >chr16_random_3|geneid_v1.2_predicted_protein_3|291_AA MAAGGSTQQRRREMAAASAAAISGAGRCRLSKIGATRRPPPARVRVAVRLRPFVDGTAGA SDPPCVRGMDSCSLEIANWRNHQETLKYQFDAFYGERSTQQDIYAGSVQPILRHLLEGQN ASVLAYGPTGAGKTHTMLGSPEQPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIY QEKVLDLLDPASGDLVIREDCRGNILIPGLSQKPISSFADFERHFLPASRNRTVGATRLN QRSSRSHAVLLVKVDQRERLAPFRQREGKLYLIDLAGSEDNRRTGNKAFG* # Gene 4 (Forward). 6 exons. 374 aa. Score = 32.15 First 101438 101584 4.42 + 0 0 4.21 5.23 9.40 0.00 AA 1: 49 chr16_random_4 Internal 102096 102255 -0.13 + 0 1 3.07 2.33 4.09 0.00 AA 50:103 chr16_random_4 Internal 102645 102754 1.25 + 2 0 2.96 2.18 7.90 0.00 AA 103:139 chr16_random_4 Internal 103461 103673 6.04 + 0 0 4.35 0.20 20.78 0.00 AA 140:210 chr16_random_4 Internal 103762 103821 0.52 + 0 0 3.45 1.73 6.02 0.00 AA 211:230 chr16_random_4 Internal 104775 105206 20.06 + 0 0 -2.89 -0.37 67.54 0.00 AA 231:374 chr16_random_4 >chr16_random_4|geneid_v1.2_predicted_cDNA_4|1122_NN ATGGACCCGGCCATGCTGGAGCGCCTCCTCAGCTTGGACCGTCTGCTTGCCTCCCAGGGG AGCCAGGGGGCCCCTCTGTTGAGTACCCCAAAGCGAGAGCGGATGGTGCTAATGAAGACA GTAGAAGAGAAGGACCTAGAGATTGAGAGGCTTAAGACGAAGCAAAAAGAACTGGAGGCC AAGATGTTGGCCCAGAAGGCTGAGGAAAAGGAGAACCATTGTCCCACAATGCTCCGGCCC CTTTCACATCGCACAGTCACAAGGGCAAAGCCCCTGAAAAARGCTGTGGTGATGCCCCTA CAGCTAATTCAGGAGCAGGCAGCATCCCCAAATGCCGAGATCCACATCCTGAAGAATAAA GGCCGGAAGAGAAAGGTGAAAGTAGCTGGGGGCTTAGGCTACACCTGGAGCCCAGAACTG GAGTCCCTGGATGCCCTAGAGCCTGAGGAGAAGGCTGAGGACTGCTGGGAGCTACAGATC AGCCCGGAGCTACTGGCTCATGGGCGCCAAAAAATACTGGATCTGCTGAACGAAGGCTCA GCCCGAGATCTCCGCAGTCTTCAGCGCATTGGCCCGAAGAAGGCCCAGCTAATCGTGGGC TGGCGGGAGCTCCACGGCCCCTTCAGCCAGGTGGAGGACCTGGAACGCGTGGAGGGCATA ACGGGGAAACAGATGGAGTCCTTCCTGAAGAAGAAGACAAAGAGCAAGGGGCCCTACATC TGCGCTCTGTGCGCCAAGGAGTTCAAGAACGGCTACAATCTCCGGAGGCACGAAGCCATC CACACGGGAGCCAAGGCCGGCCGGGTCCCCTCGGGTGCTATGAAGATGCCGACCATGGTG CCCCTGAGCCTCCTGAGCGTGCCCCAGCTGAGCGGAGCCGGCGGGGGAGGGGGAGAGGCG GGTGCCGGCGGCGGCGCTGCCGCAGTGGCCGCCGGTGGCGTGGTGACCACGACCGCCTCG GGGAAGCGCATCCGGAAGAACCATGCCTGCGAGATGTGTGGCAAGGCCTTCCGCGACGTC TACCACCTGAACCGACACAAGCTGTCGCACTCGGACGAGAAGCCCTACCAGTGCCCGGTG TGCCAGCAGCGCTTCAAGCGCAAGGACCGCATGAGCTACCAC >chr16_random_4|geneid_v1.2_predicted_protein_4|374_AA MDPAMLERLLSLDRLLASQGSQGAPLLSTPKRERMVLMKTVEEKDLEIERLKTKQKELEA KMLAQKAEEKENHCPTMLRPLSHRTVTRAKPLKXAVVMPLQLIQEQAASPNAEIHILKNK GRKRKVKVAGGLGYTWSPELESLDALEPEEKAEDCWELQISPELLAHGRQKILDLLNEGS ARDLRSLQRIGPKKAQLIVGWRELHGPFSQVEDLERVEGITGKQMESFLKKKTKSKGPYI CALCAKEFKNGYNLRRHEAIHTGAKAGRVPSGAMKMPTMVPLSLLSVPQLSGAGGGGGEA GAGGGAAAVAAGGVVTTTASGKRIRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPV CQQRFKRKDRMSYH