## date Wed Apr 19 13:20:07 2006 ## source-version: geneid v 1.2 -- geneid@imim.es # Sequence chr10_random - Length = 113275 bps # Optimal Gene Structure. 3 genes. Score = 23.34 # Gene 1 (Reverse). 4 exons. 136 aa. Score = 5.03 Internal 7645 7725 1.49 - 0 0 1.72 4.56 8.18 0.00 AA 110:136 chr10_random_1 Internal 8172 8339 0.30 - 0 0 1.54 0.53 11.51 0.00 AA 54:109 chr10_random_1 Internal 10176 10255 4.46 - 2 0 3.56 6.59 9.80 0.00 AA 27: 53 chr10_random_1 First 12611 12689 -1.22 - 0 1 4.25 0.65 3.49 0.00 AA 1: 27 chr10_random_1 >chr10_random_1|geneid_v1.2_predicted_cDNA_1|408_NN ATGAAGAAGATGTCTGGAAGAGAAATCCCAAAGCTTTTGCAATTCAGTCTGCTGTGGGAA TGGCTTGATCCTTTCACAGGTAAAAAGCTCCGACTCACCATTATTGAATGTGGGTGTGAC ATTAACATGATGATTGATCTGGCTGAAGTAGCAGATCTGCTATTAATTGTGATTTTCAAT CAATGGCAGCAACATGGGTCCATTCTGGGCTTCCCCAAGGCAAAGCCCTATGAAGGAAGC ATCTTGGAGGCCGACTGTGACATACTGATCCCAGCTGCCAGTGAGAAGCAGTTGACCAAA TCCAACGCACCCAGAGTCAAAGCCAAGATCATTGCTGAAGGTGCCAATGGGCCAACAACT CCAGAAGCTGACAAGATCTTCCTGGAGAGAAACATTATGGTTATTCCA >chr10_random_1|geneid_v1.2_predicted_protein_1|136_AA MKKMSGREIPKLLQFSLLWEWLDPFTGKKLRLTIIECGCDINMMIDLAEVADLLLIVIFN QWQQHGSILGFPKAKPYEGSILEADCDILIPAASEKQLTKSNAPRVKAKIIAEGANGPTT PEADKIFLERNIMVIP # Gene 2 (Forward). 1 exons. 330 aa. Score = 13.18 Single 28206 29195 13.18 + 0 0 -0.26 0.00 47.22 0.00 AA 1:330 chr10_random_2 >chr10_random_2|geneid_v1.2_predicted_cDNA_2|990_NN ATGGCTCATGCTAGTTCATCAAATATTGGGCCCTTCCTGGACAAGAGAAGCTATAACCCA ATGCCAGAGCAGAAGTCAGCATCCAGTATTGTAGCTGTCCCTCTCAGTGAATGGCTGCTT GGGAGCCAACCTGCCAGTGGTCATCAGGCTCCTTACATACCCAGCACCAACCCCCAGGAC TGGCTCACCCAAAAGCAGACCTTGGAGAATAGCCAGACTTCTTTCAGAGCCTGCAATTTC TTCAGTAATGTCTGGGGAAACCTAAAGGGCTTAGAAAACTGGCTCCTCAAGAGTCAGCAA CAGGAAATTCCTGAAAAACCAAGTTATCAAAACTGTAACAGCCATTCCACTACTAGTCAT TTCTCCATTGAAATGGAAAAGTTTGAAGATCTAAAGCTTCCTGATCAAGATGAGATGGAC CTATCAGATTGGCTGGTGACTCCCCAGGAATCCCATAAGCTGAGGAAGCCTGAGAATGGC AGTTGTGAAACCAGTGAGAAGTTTAAGCTCTTATTCCAGTCCTATAATGTGAATGATTGG CTTGTCAAGACTTACTCCTGTACCAACTGTCAGGGAAACCAGCCCCAAACTGTGGGGATT GAAAACCTGGGCAATCTGAAGTGTCTGAATGACCACTTGGAGGCCAAGAAACCATTGTTC ACCCTCAGCATGGTTACAGAGGATTGGCTTGTCCAGAACCATCAGGACCCATGTAAGGCA GAAGAGGTGTGCAGAGCCAATGAGCCCTGTACAAGCTCTGCAGAGTGTGTGTGTGATGAG AGCTGTGAGAAGGAGGCTCTGTATAAGTGGCTTCTGAAGAAAGAAGGAAAGGATAAAAAT GGGATGCCCGTGGAACCCAAACCTGAGCCTGAGAAGCATAAAGATTCCCTGAATATGTGG CTCTGTCCTTCTAGAAAAGAATTAATAGAACAAACTAAGCACCAAAGGCAGTGGTTCCTT CTAGAATTGCTGATTCCTTCCAAGTCATAA >chr10_random_2|geneid_v1.2_predicted_protein_2|330_AA MAHASSSNIGPFLDKRSYNPMPEQKSASSIVAVPLSEWLLGSQPASGHQAPYIPSTNPQD WLTQKQTLENSQTSFRACNFFSNVWGNLKGLENWLLKSQQQEIPEKPSYQNCNSHSTTSH FSIEMEKFEDLKLPDQDEMDLSDWLVTPQESHKLRKPENGSCETSEKFKLLFQSYNVNDW LVKTYSCTNCQGNQPQTVGIENLGNLKCLNDHLEAKKPLFTLSMVTEDWLVQNHQDPCKA EEVCRANEPCTSSAECVCDESCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMW LCPSRKELIEQTKHQRQWFLLELLIPSKS* # Gene 3 (Reverse). 2 exons. 66 aa. Score = 5.13 Terminal 83564 83697 2.46 - 2 0 0.00 4.62 13.09 0.00 AA 22: 66 chr10_random_3 Internal 87374 87437 2.67 - 0 1 2.98 6.78 5.92 0.00 AA 1: 22 chr10_random_3 >chr10_random_3|geneid_v1.2_predicted_cDNA_3|198_NN GATAATGAATTGGAAAAGATCACAAGGAGGTTCACCATGGAGCTAGCAAAAAAGGGCTTT ATTGCCATTGCTGAAGCCATAAAGAAAGCCCAAGAGTCAGGGGACAAAAAGATGAAGGAA ATCACTGAGACAGTGACCAACACAGTCACAAATGCCATCACCCATGCAGCAGAGAGTCTG GACAAACTTGGACAGTGA >chr10_random_3|geneid_v1.2_predicted_protein_3|66_AA DNELEKITRRFTMELAKKGFIAIAEAIKKAQESGDKKMKEITETVTNTVTNAITHAAESL DKLGQ*