## date Tue May 2 18:24:51 2006 ## source-version: geneid v 1.2 -- geneid@imim.es # Sequence chr6_cox_hap1 - Length = 4731698 bps # Optimal Gene Structure. 97 genes. Score = 18186.22 # Gene 1 (Reverse). 3 exons. 283 aa. Score = 3.72 Internal 1438 1689 2.73 - 0 0 -0.70 3.01 20.79 -88.20 AA 200:283 chr6_cox_hap1_1 Internal 5738 5914 0.97 - 0 0 3.69 3.51 10.46 -61.95 AA 141:199 chr6_cox_hap1_1 First 12787 13206 0.03 - 0 0 3.89 2.66 21.18 -147.00 AA 1:140 chr6_cox_hap1_1 >chr6_cox_hap1_1|SGP_v1.0_predicted_cDNA_1|849_NN ATGGAAGCAGTCTCTAGGGTCTTCCCAGCCTTGGCTGGCCAGGCTCCAGAAGAACAAGGG GAGATTATCAAAGTAAAGGTTAAAGAAGAAGACCACACTTGGGATCAGGAATCAGCCCTA CGTAGGAATTTGTCTTATACCAGGGAACTCTCTCGTCAGCGCTTCAGGCAGTTCTGCTAT CAGGAGACACCTGGGCCCAGGGAGGCTCTGAGTCAACTGCGGGAACTTTGCCGTCAGTGG CTGAACCCAGAGATACATACCAAGGAGCAGATCCTGGAATTGTTGGTGCTGGAGCAGTTC CTGACCATCCTGCCTGAGGAGCTCCAGTCTTGGGTGCGGGAGCATAATCCTGAGAGTGGA GAAGAGGTGGTGACTTTGCTGGAAGATTTGGAGAGGGAGCTTGATGAACCTAGACAGCAG GTCTCACAGGGCACATATGGGCAGGAAGTTTCTATGGAAGAAATGATCCCTCTGGATTCT GCAAAGGAGTCTTTAGGCACCCAGCTTCAGTCTATGGAAGATAGAATGGAATGTGAATCT CCAGAGCCACACCCACTTCAAGATAATGGTGAGAATAATTTAGTTCTAAGAAAGAAGATG TCCCAAAATCAGCCCTATCACAGAAGCATGCAACAGACTCCATGTGAAAGTGCATTTAGC TCTGAAGCTAAACTGGGCTTGTCCCATTCTCAGCTAACTGAAGAACTTGTTGCCAGCTTG CATACAGAAAATGAATTAGATCAGGCTGACAAAGAGTTAGAAAATACTTTAAGAGCCCAG TATGAAGAAAACATTGAGACTGGAACAGACAGTAGTGATATTGAAGAGAATCTTTCTGTC ACTCCTAAG >chr6_cox_hap1_1|SGP_v1.0_predicted_protein_1|283_AA MEAVSRVFPALAGQAPEEQGEIIKVKVKEEDHTWDQESALRRNLSYTRELSRQRFRQFCY QETPGPREALSQLRELCRQWLNPEIHTKEQILELLVLEQFLTILPEELQSWVREHNPESG EEVVTLLEDLERELDEPRQQVSQGTYGQEVSMEEMIPLDSAKESLGTQLQSMEDRMECES PEPHPLQDNGENNLVLRKKMSQNQPYHRSMQQTPCESAFSSEAKLGLSHSQLTEELVASL HTENELDQADKELENTLRAQYEENIETGTDSSDIEENLSVTPK # Gene 2 (Reverse). 2 exons. 50 aa. Score = 2.09 Terminal 42667 42800 4.11 - 2 0 0.00 2.37 15.49 -45.85 AA 6: 50 chr6_cox_hap1_2 First 75676 75691 -2.02 - 0 1 1.27 3.55 2.38 -5.60 AA 1: 6 chr6_cox_hap1_2 >chr6_cox_hap1_2|SGP_v1.0_predicted_cDNA_2|150_NN ATGGCGGGGAAGCTGGGCCACTGCGCCGCGCAGATCCGGTCCTCGGGCGACCGCTCTGTC CCAGTTGGGCGAGACTACCTGGTCCTGATAACAGTGGATAACGGCTTTAACGGCCAGAAG GTCAGCGCAGTCCCGGATGAGGACGAGTAG >chr6_cox_hap1_2|SGP_v1.0_predicted_protein_2|50_AA MAGKLGHCAAQIRSSGDRSVPVGRDYLVLITVDNGFNGQKVSAVPDEDE* # Gene 3 (Forward). 2 exons. 68 aa. Score = 2.70 First 288541 288740 6.75 + 0 2 4.94 2.79 14.11 -70.00 AA 1: 67 chr6_cox_hap1_3 Terminal 304566 304569 -4.05 + 1 0 5.62 0.00 0.00 -0.35 AA 67: 68 chr6_cox_hap1_3 >chr6_cox_hap1_3|SGP_v1.0_predicted_cDNA_3|204_NN ATGGCGCCCAGCAGGAATGGCATGATGTTGAAGCCCCACTTCCACAAGGACTGGCAGCAG CGTGTGGCCACGTGGTTCAACCAGAAGATCCGCAGAATCAAGGCCCGGCAAGCCAAAGGG CGCTGCATCGCCCCGCGCCCGGAGAGTCGGGACCCATCTGGCCCATTGTGCTGTGCCCTG CTGTGCGTTATCACATCAAGGTAG >chr6_cox_hap1_3|SGP_v1.0_predicted_protein_3|68_AA MAPSRNGMMLKPHFHKDWQQRVATWFNQKIRRIKARQAKGRCIAPRPESRDPSGPLCCAL LCVITSR* # Gene 4 (Reverse). 9 exons. 341 aa. Score = 70.94 Terminal 331200 331206 -4.07 - 1 0 0.00 5.41 0.00 -1.40 AA 339:341 chr6_cox_hap1_4 Internal 331904 331973 2.44 - 2 2 1.53 4.53 7.23 -24.50 AA 316:339 chr6_cox_hap1_4 Internal 334544 334570 0.26 - 2 1 4.08 5.63 -0.12 -9.45 AA 307:316 chr6_cox_hap1_4 Internal 336112 336144 1.91 - 2 1 2.28 5.73 3.27 -11.55 AA 296:307 chr6_cox_hap1_4 Internal 336277 336392 -1.66 - 1 1 2.16 4.00 6.73 -40.60 AA 257:296 chr6_cox_hap1_4 Internal 339003 339025 2.34 - 0 2 1.38 8.43 1.10 -8.05 AA 250:257 chr6_cox_hap1_4 Internal 347324 347554 11.09 - 0 0 4.71 3.01 19.53 -80.85 AA 173:249 chr6_cox_hap1_4 Internal 349204 349299 2.39 - 0 0 3.32 3.59 7.89 -33.60 AA 141:172 chr6_cox_hap1_4 First 350525 350944 56.26 - 0 0 3.70 5.73 58.66 -147.00 AA 1:140 chr6_cox_hap1_4 >chr6_cox_hap1_4|SGP_v1.0_predicted_cDNA_4|1023_NN ATGGCCTCCGGGAGTGTGGCCGAGTGCCTGCAGCAGGAGACCACCTGCCCCGTGTGCCTG CAGTACTTCGCAGAGCCCATGATGCTCGACTGCGGCCATAACATCTGTTGCGCGTGCCTC GCCCGCTGCTGGGGCACGGCAGAGACTAACGTGTCGTGCCCGCAGTGCCGGGAGACCTTC CCGCAGAGGCACATGCGGCCCAACCGGCACCTGGCCAACGTGACCCAACTGGTGAAGCAG CTGCGCACCGAGCGGCCGTCGGGGCCCGGCGGCGAGATGGGCGTGTGCGAGAAGCACCGC GAGCCCCTGAAGCTGTACTGCGAGGAGGACCAGATGCCCATCTGCGTGGTGTGCGACCGC TCCCGCGAGCACCGCGGCCACAGCGTGCTGCCGCTCGAGGAGGCGGTGGAGGGCTTCAAG GAGCAAATCCAGAACCAGCTCGACCATTTAAAAAGAGTGAAAGATTTAAAGAAGAGACGT CGGGCCCAGGGGGAACAGGCACGAGCTGAACTCTTGAGCCTAACCCAGATGGAGAGGGAG AAGATTGTTTGGGAGTTTGAGCAGCTGTATCACTCCTTAAAGGAGCATGAGTATCGCCTC CTGGCCCGCCTTGAGGAGCTAGACTTGGCCATCTACAATAGCATCAATGGTGCCATCACC CAGTTCTCTTGCAACATCTCCCACCTCAGCAGCCTGATCGCTCAGCTAGAAGAGAAGCAG CAGCAGCCCACCAGGGAGCTCCTGCAGGACATTGGGGACACATTGAGCAGGGCTGAAAGA ATCAGGATTCCTGAACCTTGGATCACACCTCCAGATTTGCAAGAGAAAATCCACATTTTT GCCCAAAAATGTCTATTCTTGACGGAGAGTCTAAAGCAGTTCACAGAAAAAATGCAGTCA GATATGGAGAAAATCCAAGAATTAAGAGAGGCTCAGTTATACTCAGTGGACGTGACTCTG GACCCAGACACGGCCTACCCCAGCCTGATCCTCTCTGATAATCTGCGGCAAGTGCGATTG TGA >chr6_cox_hap1_4|SGP_v1.0_predicted_protein_4|341_AA MASGSVAECLQQETTCPVCLQYFAEPMMLDCGHNICCACLARCWGTAETNVSCPQCRETF PQRHMRPNRHLANVTQLVKQLRTERPSGPGGEMGVCEKHREPLKLYCEEDQMPICVVCDR SREHRGHSVLPLEEAVEGFKEQIQNQLDHLKRVKDLKKRRRAQGEQARAELLSLTQMERE KIVWEFEQLYHSLKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLSSLIAQLEEKQ QQPTRELLQDIGDTLSRAERIRIPEPWITPPDLQEKIHIFAQKCLFLTESLKQFTEKMQS DMEKIQELREAQLYSVDVTLDPDTAYPSLILSDNLRQVRL* # Gene 5 (Reverse). 3 exons. 143 aa. Score = 22.31 Terminal 392375 392590 2.65 - 0 0 0.00 -2.04 22.92 -74.55 AA 72:143 chr6_cox_hap1_5 Internal 392737 392883 10.43 - 0 0 1.25 -2.23 24.22 -51.45 AA 23: 71 chr6_cox_hap1_5 First 393074 393139 9.23 - 0 0 0.37 2.77 14.13 -23.10 AA 1: 22 chr6_cox_hap1_5 >chr6_cox_hap1_5|SGP_v1.0_predicted_cDNA_5|429_NN ATGGAGACCAAGAACCGGAAGCTGGAGAGCAAAATCCGGGAGCACCTGGAGAAGAAGGGA CGCCAGGTCATTGATGATACCAATGTCACTCGGCTGCAGCTGGAGACAGAGATCGAGGCT CTCAAGGAGGAGCTGCTCTTCCTGAAGAAGAACCAAGAAGAGGAAGTAAAAGGCCTACAA GCCCAGATTGCCATCTCTGGGTTGACCGTGGAGTCCATCGGTGTTGGAGCTGCTGAGATG ACGCTCACGGAGCAGAGATATACAGTCCAGTCCTTGGAGATCGACCTGGACTCCATGAGA AATCTGAAGGCCAGCTTGGAGAACAGCTTGAGGGAGGTGGAGGCCCGCTATGTCCTGCAG ATGGAGCAGCTCAGCGGAATCCTGCTGCACCTGGAGTCAGAGCTGACACAGACCGGGGCA GACGGATAG >chr6_cox_hap1_5|SGP_v1.0_predicted_protein_5|143_AA METKNRKLESKIREHLEKKGRQVIDDTNVTRLQLETEIEALKEELLFLKKNQEEEVKGLQ AQIAISGLTVESIGVGAAEMTLTEQRYTVQSLEIDLDSMRNLKASLENSLREVEARYVLQ MEQLSGILLHLESELTQTGADG* # Gene 6 (Reverse). 3 exons. 559 aa. Score = 101.24 Terminal 418084 419669 97.76 - 2 0 0.00 3.13 153.80 -554.05 AA 31:559 chr6_cox_hap1_6 Internal 426596 426677 3.81 - 0 1 3.29 4.01 7.81 -28.70 AA 4: 31 chr6_cox_hap1_6 First 427029 427037 -0.33 - 0 0 4.83 1.97 1.07 -3.15 AA 1: 3 chr6_cox_hap1_6 >chr6_cox_hap1_6|SGP_v1.0_predicted_cDNA_6|1677_NN ATGCAGGAGGTTGTGCTGTTGGATGAGAGTTCAGGACCACCAAGCCAGCTGCTTTGGACC CGCCAGGATACCCAGCTCCCTCAGGAAAGCGTGTCAGCTGACAAGATGTGGCCTGAGAAT GAAAAGGCAAGTTCACAACAAGAGATTTTTGAAAATGGAGAAGCCTACTGGATGAAATTT AACAGTCTCCTAAAAGTTGATTCCCGGGATCCTAAGGTTAGAGAAGTTTGTGTTCAGGAT GTCAAATTAGAGAATCAATGGGAAACATCTATAAGGGAGAAACTGAGAGAAGAGAAAGAA GGCTCTGAGGAAGTGACCTGCAAAAAAGGAAAGAACCAGAAAGTGCTTAGTAAAAACTTG AATCCAAACTCAAAACATAGTCAATGTAATAAAGTTCTTATAGCACAGAAACTCCATGAA TGTGCCAGGTGTGGCAAAAACTTCAGTTGGCACTCAGATCTAATTCTCCATGAGCAAATT CATTCTGGTGAGAAACCCCATGTGTGTAATGAGTGTGGGAAAGCATTCAAGACCAGAAAT CAGCTTTCTATGCACCGGATAATCCACACAGGGGAGAAACCTTTTAATTGCACCCAGTGT GGGAAGGCTTTCAACAGTAGATCAGCTCTTTGCCGACATAAAAAAACCCACAGTGGGGAG AAGCCTCACGAGTGCAGGGACTGTGGGAAGGCCTTCAAGACCAGGAACCGTCTCTGTATG CATCAGCTTATCCACACCGGGGAGAAGCCTTACAAATGTAACTGCTGTGGGAAGGCCTTC CAGTTTAAGCATTCCCTTACCATCCATGGCAGAATCCACACTGGGGAGAAGCCATATGAA TGTGAGGAGTGCGGGAAGGCCTTCAGTGGGAGTTCAGACCTCACCAAACACATAAGAATC CACACTGGGGAACGACCTTATGAGTGCAGCAAGTGTGGAAGGGCCTTCAGTCGGAGCTCA GACCTAAGCAAACACAAACGAATCCATACTCGGGAGAAACACTATGGGTGTCCCCAGTGT GGAAAAGACTTCAGCATCAAGGCAGAACTCACCAAACACAGAAGGATCCACACTGAAGAG AAACGTTACAGGTGTGAGGAGTGTGGGAAAGCCTTTCGTCATAACTGTAAGCGCAGGGCT CATGAACGAGAGCATACAGGGGAGAAGCCCTATCAATGCAGGGATTGTGGGAAAACCTTC CAAGATAAGCACTGCCTTACCATCCATCAGAGAATCCACACTGGAGAGAAACCTTACAAA TGTTTAGAGTGTGGGAAAGCTTTCAGTGGGAAGTCAAACTTGACCAATCATCGAAGAATT CACACTGGAGAGAAGCCTCACAAATGTGAGGTATGTGGAATGGCCTTCCATCATAGTTCA GTCCTGAGGCAGCACAAAAGAATCCACACTGGTGAGAAGCCATACACCTGCAGTGAGTGT GGCACGTCCTTCCGTCAGGGCTCAGCTCTGATTGGACATAAGCGAGTTCATACTGGGGAG AAACCTTATGAATGTGAGGAATGTGGAAAAGCTTTTAGAGTGAGCTCAAATCTTACTGGA CATAAGAAAAGAAAACATCAAGTATGGAGTACCCATGAACTTGATGGGAGTAGGAAATCC CTCTCTCCAGTGACTGTTTCTCAGACCTCAGTAGTCAGTATTTTGACCAGTGCCTGA >chr6_cox_hap1_6|SGP_v1.0_predicted_protein_6|559_AA MQEVVLLDESSGPPSQLLWTRQDTQLPQESVSADKMWPENEKASSQQEIFENGEAYWMKF NSLLKVDSRDPKVREVCVQDVKLENQWETSIREKLREEKEGSEEVTCKKGKNQKVLSKNL NPNSKHSQCNKVLIAQKLHECARCGKNFSWHSDLILHEQIHSGEKPHVCNECGKAFKTRN QLSMHRIIHTGEKPFNCTQCGKAFNSRSALCRHKKTHSGEKPHECRDCGKAFKTRNRLCM HQLIHTGEKPYKCNCCGKAFQFKHSLTIHGRIHTGEKPYECEECGKAFSGSSDLTKHIRI HTGERPYECSKCGRAFSRSSDLSKHKRIHTREKHYGCPQCGKDFSIKAELTKHRRIHTEE KRYRCEECGKAFRHNCKRRAHEREHTGEKPYQCRDCGKTFQDKHCLTIHQRIHTGEKPYK CLECGKAFSGKSNLTNHRRIHTGEKPHKCEVCGMAFHHSSVLRQHKRIHTGEKPYTCSEC GTSFRQGSALIGHKRVHTGEKPYECEECGKAFRVSSNLTGHKKRKHQVWSTHELDGSRKS LSPVTVSQTSVVSILTSA* # Gene 7 (Forward). 2 exons. 16 aa. Score = 0.21 First 647225 647230 2.39 + 0 0 2.13 5.39 2.12 -2.10 AA 1: 2 chr6_cox_hap1_7 Terminal 683034 683075 -2.18 + 0 0 4.04 0.00 4.95 -13.65 AA 3: 16 chr6_cox_hap1_7 >chr6_cox_hap1_7|SGP_v1.0_predicted_cDNA_7|48_NN ATGGCGACACTAGGAATTCGTCAAAGCAACCAGATCACCAGGGACTAG >chr6_cox_hap1_7|SGP_v1.0_predicted_protein_7|16_AA MATLGIRQSNQITRD* # Gene 8 (Reverse). 2 exons. 170 aa. Score = 1.96 Terminal 818527 818537 -1.90 - 2 0 0.00 7.23 0.13 -2.80 AA 167:170 chr6_cox_hap1_8 First 819797 820295 3.86 - 0 1 1.92 -0.01 33.31 -174.65 AA 1:167 chr6_cox_hap1_8 >chr6_cox_hap1_8|SGP_v1.0_predicted_cDNA_8|510_NN ATGATGGATACGGTTGGAACCACAGAAGTTCAAGCGAGAAGTCATTACGGAGTGCAGCAG GGCATGGAAAAAACCAATGACCCAGATTGTGATGGCCATCTGGGTACAGAGCTGAGGGTT CATGATGACAGTGTAGCGAAGTGGCTTGCAGATAGCCACAGAGAGGTCAAATGCCATCAC GGCGAACAACATGGACTCCGTGCTGCCCAGGAAGTGGAAGAAATGAAGCTGGCTTATGCA TCCCAAGAAAGAAATTGCTTTGTGTGTAGAGAGAAAGTTCTGCAGCATTTTTGGCAGTGT CACCGTAGAGTAACAGATATCCAGGTAGGACAGGTTTCCCAGGAAGAAATACATAAGGGA ATGGAGTCTAGGATCGGAGATGACAATCATCAGAACGGCTCCATTCCCAGTCACACTGAT GAAGTAGATGGTGAGGAAAACCACGAAGAGAAAAGGCTGCAGTTCTTGAATGTCTGTCAC TCCCAAGAGGAGAAATTCGAATTGAAATAA >chr6_cox_hap1_8|SGP_v1.0_predicted_protein_8|170_AA MMDTVGTTEVQARSHYGVQQGMEKTNDPDCDGHLGTELRVHDDSVAKWLADSHREVKCHH GEQHGLRAAQEVEEMKLAYASQERNCFVCREKVLQHFWQCHRRVTDIQVGQVSQEEIHKG MESRIGDDNHQNGSIPSHTDEVDGEENHEEKRLQFLNVCHSQEEKFELK* # Gene 9 (Forward). 1 exons. 197 aa. Score = 7.45 Single 863426 864016 7.45 + 0 0 2.53 0.00 39.93 -205.80 AA 1:197 chr6_cox_hap1_9 >chr6_cox_hap1_9|SGP_v1.0_predicted_cDNA_9|591_NN ATGGCCTATGACCGCTATGCAGCCATCTGTGAACCCCTCCGCTACCCACTGCTGCTGAGC CACCGGGTGTGTCTACAGCTAGCTGGGTCGGCGTGGGCCTGTGGGGTGCTGGTGGGGCTG GGCCACACCCCTTTCATCTTCTCTTTGCCCTTCTGCGGCCCCAATACCATCCCGCAGTTC TTCTGTGAGATCCAGCCTGTCCTGCAGCTGGTATGTGGAGACACCTCGCTTAATGAACTG CAGATTATCCTGGCAACAGCCCTCCTCATCCTCTGCCCCTTTGGCCTCATCCTGGGCTCC TACGGGCGTATCCTCGTTACCATCTTCCGGATCCCATCTGTTGCGGGCCGCCGCAAGGCC TTCTCCACCTGCTCCTCCCACCTGATCGTGGTCTCCCTCTTCTATGGCACCGCACTCTTT ATCTATATTCGCCCTAAGGCCAGCTACGATCCGGCCACTGACCCTCTGGTGTCCCTCTTC TATGCTGTGGTCACCCCCATCCTCAACCCCATCATCTACAGCCTGCGGAACACAGAGGTC AAAGCTGCCCTAAAGAGAACCATCCAGAAAACGGTGCCTATGGAGATTTGA >chr6_cox_hap1_9|SGP_v1.0_predicted_protein_9|197_AA MAYDRYAAICEPLRYPLLLSHRVCLQLAGSAWACGVLVGLGHTPFIFSLPFCGPNTIPQF FCEIQPVLQLVCGDTSLNELQIILATALLILCPFGLILGSYGRILVTIFRIPSVAGRRKA FSTCSSHLIVVSLFYGTALFIYIRPKASYDPATDPLVSLFYAVVTPILNPIIYSLRNTEV KAALKRTIQKTVPMEI* # Gene 10 (Reverse). 2 exons. 12 aa. Score = 6628.72 Terminal 897908 897928 -4.04 - 0 0 0.00 4.80 1.37 -6.30 AA 6: 12 chr6_cox_hap1_10 First 900001 900015 6632.76 - 0 0 -5.39 1.14 0.82 34995.10 AA 1: 5 chr6_cox_hap1_10 >chr6_cox_hap1_10|SGP_v1.0_predicted_cDNA_10|36_NN ATGGCTCAAGTGCATAGTAACCAGATTTCTGACTGA >chr6_cox_hap1_10|SGP_v1.0_predicted_protein_10|12_AA MAQVHSNQISD* # Gene 11 (Forward). 2 exons. 320 aa. Score = 70.13 First 953604 953621 -1.43 + 0 0 0.48 5.16 1.25 -6.30 AA 1: 6 chr6_cox_hap1_11 Terminal 976319 977260 71.56 + 0 0 2.31 0.00 103.61 -328.65 AA 7:320 chr6_cox_hap1_11 >chr6_cox_hap1_11|SGP_v1.0_predicted_cDNA_11|960_NN ATGTCTACCTACTGGGAGGCCAACTACAGCGCAGAGGAGCGCTTTCTCCTGCTGGGTTTC TCCGACTGGCCTTCCCTGCAGCCGGTCCTCTTCGCCCTTGTCCTCCTGTGCTACCTCCTG ACCTTGACGGGCAACTCGGCGCTGGTGCTGCTGGCGGTGCGCGACCCGCGCCTGCACACG CCCATGTACTACTTCCTCTGCCACCTGGCCTTGGTAGACGCGGGCTTCACTACTAGCGTG GTGCCGCCGCTGCTGGCCAACCTGCGCGGACCAGCGCTCTGGCTGCCGCGCAGCCACTGC ACGGCCCAGCTGTGCGCATCGCTGGCTCTGGGTTCCGCCGAATGCGTCCTCCTGGCGGTG ATGGCTCTGGACCGCGCGGCCGCAGTGTGCCGCCCGCTGCGCTATGCGGGGCTCGTCTCC CCGCGCCTATGTCGCACGCTGGCCAGCGCCTCCTGGCTAAGTGGCCTCACCAACTCGGTT GCGCAAACCGCGCTCCTGGCTGAGCGGCCGCTGTGCGCGCCCCGCCTGCTGGACCACTTC ATCTGTGAGCTGCCGGCGTTGCTCAAGCTGGCCTGCGGAGGCGACGGAGACACTACCGAG AACCAGATGTTCGCCGCCCGCGTGGTCATCCTGCTGCTGCCGTTTGCCGTCATCCTGGCC TCCTACGGTGCCGTGGCCCGAGCTGTCTGTTGCATGCGGTTCAGCGGAGGCCGGAGGAGG GCGGTGGGCACGTGTGGGTCCCACCTGACAGCCGTCTGCCTGTTCTACGGCTCGGCCATC TACACCTACCTGCAGCCCGCGCAGCGCTACAACCAGGCACGGGGCAAGTTCGTATCGCTC TTCTACACCGTGGTCACACCTGCTCTCAACCCGCTCATCTACACCCTCAGGAATAAGAAA GTGAAGGGGGCAGCGAGGAGGCTGCTGCGGAGTCTGGGGAGAGGCCAGGCTGGGCAGTGA >chr6_cox_hap1_11|SGP_v1.0_predicted_protein_11|320_AA MSTYWEANYSAEERFLLLGFSDWPSLQPVLFALVLLCYLLTLTGNSALVLLAVRDPRLHT PMYYFLCHLALVDAGFTTSVVPPLLANLRGPALWLPRSHCTAQLCASLALGSAECVLLAV MALDRAAAVCRPLRYAGLVSPRLCRTLASASWLSGLTNSVAQTALLAERPLCAPRLLDHF ICELPALLKLACGGDGDTTENQMFAARVVILLLPFAVILASYGAVARAVCCMRFSGGRRR AVGTCGSHLTAVCLFYGSAIYTYLQPAQRYNQARGKFVSLFYTVVTPALNPLIYTLRNKK VKGAARRLLRSLGRGQAGQ* # Gene 12 (Reverse). 2 exons. 185 aa. Score = 4.50 Terminal 978974 979444 10.00 - 0 0 0.00 4.03 34.68 -163.80 AA 29:185 chr6_cox_hap1_12 First 983124 983207 -5.50 - 0 0 0.70 1.84 5.64 -29.40 AA 1: 28 chr6_cox_hap1_12 >chr6_cox_hap1_12|SGP_v1.0_predicted_cDNA_12|555_NN ATGCCGGGAATTCAAGGAACGAGAATTCCCATAGACACAGACACAGCTAGACATAGAGAT CTGCAGCTTAGGTTTGGGCTGTGGGTGCATGTCCGTTCCGAGGAATGGGATTTAATGACC TTTGATGCCAACCCATATGACAGCGTGAAAAAAATCAAAGAACATGTCCGGTCTAAGACC AAGGTTCCTGTGCAGGACCAGGTTCTTTTGCTGGGCTCCAAGATCTTAAAGCCACGGAGA AGCCTCTCATCTTACGGCATTGACAAAGAGAAGACCATCCACCTTACCCTGAAAGTGGTG AAGCCCAGTGATGAGGAGCTGCCCTTGTTTCTTGTGGAGTCAGGTGATGAGGCAAAGAGG CACCTCCTCCAGGTGCGAAGGTCCAGCTCAGTGGCACAAGTGAAAGCAATGATCGAGACT AAGACGGGTATAATCCCTGAGACCCAGATTGTGACTTGCAATGGAAAGAGACTGGAAGAT GGGAAGATGATGGCAGATTACGGCATCAGAAAGGGCAACTTACTCTTCCTGGCATCTTAT TGTATTGGAGGGTGA >chr6_cox_hap1_12|SGP_v1.0_predicted_protein_12|185_AA MPGIQGTRIPIDTDTARHRDLQLRFGLWVHVRSEEWDLMTFDANPYDSVKKIKEHVRSKT KVPVQDQVLLLGSKILKPRRSLSSYGIDKEKTIHLTLKVVKPSDEELPLFLVESGDEAKR HLLQVRRSSSVAQVKAMIETKTGIIPETQIVTCNGKRLEDGKMMADYGIRKGNLLFLASY CIGG* # Gene 13 (Forward). 3 exons. 279 aa. Score = 6.04 First 997229 997447 -0.39 + 0 0 2.31 -1.02 16.95 -76.65 AA 1: 73 chr6_cox_hap1_13 Internal 1000662 1000839 4.78 + 0 1 1.56 -1.11 20.75 -62.30 AA 74:133 chr6_cox_hap1_13 Terminal 1005605 1006044 1.64 + 2 0 5.79 0.00 24.76 -152.95 AA 133:279 chr6_cox_hap1_13 >chr6_cox_hap1_13|SGP_v1.0_predicted_cDNA_13|837_NN ATGCTGGTCAACCTCTGGGAGCCAAAGAAGACCATCATCTTACTGGGCTGCTCTGTCCAG TTCTTCATCTTCCTGTCCCTGGGGACCACTGAGTGCATCCTCCTGACGGTGATGGCCTTT GACCGCTACATGGCTATCTTCAAGCCCCTGCGCCATGCCACCATCGTCCACCTCTGCCTG TGCTGGCAGCTGGCATCTGTGGCCTGGGTCATTGGGCTGACTGTGGCAGATTACGCCAAC TGGGATCCGGCGGTCGCAAGGTCTAGAGGAGTCAAGAAAGCCATCACCAACGTCGTTCAG CAGGAAGTAAAATCCCTTTGTGTCTTGGAAGCCTCCCAGGTTCCTGCAGAAGAAGCTGTT TCTGGAGCTAGTGAGCCCTATGACATCATCGACAGCAGCCAGAAGGTGGTGGTCGTACAA TGCGAGAGCATCAACATTTCTGGCAAGTTCTACAGAAACAAGTTGAAGTACCTGGGCTTT CTCCGCAAGCGGATGAACACCTTCTGGAGGCCCTGCCATTTCTCGGCCCTAGCCGCATCT TCTGGTGGATGGTGCAAGGCCCACTGCCCCACAAGACTCACCAAGGCCAGGCCGCCCTCA ACCACCTCAAGGTGTCTGACGGCATTCCACCGCCCCATGACAAGAAAAAGCTTTGGTGGT TCCTGCTGCCCTCAAGCTTGTGTGTCTGAAGCCTACAAGAAAATTTGTCCGCCTGGACAC CGAGCTTATGAAGTTAGCTGGAAGTACCAGGCAGTGACAGCCACCCTGAAGAAGAGGAAG GAGAAGGCCAAGATCCACTACCAGAAGAAGAAACAGCTTATGAGGCTACAGAAATAG >chr6_cox_hap1_13|SGP_v1.0_predicted_protein_13|279_AA MLVNLWEPKKTIILLGCSVQFFIFLSLGTTECILLTVMAFDRYMAIFKPLRHATIVHLCL CWQLASVAWVIGLTVADYANWDPAVARSRGVKKAITNVVQQEVKSLCVLEASQVPAEEAV SGASEPYDIIDSSQKVVVVQCESINISGKFYRNKLKYLGFLRKRMNTFWRPCHFSALAAS SGGWCKAHCPTRLTKARPPSTTSRCLTAFHRPMTRKSFGGSCCPQACVSEAYKKICPPGH RAYEVSWKYQAVTATLKKRKEKAKIHYQKKKQLMRLQK* # Gene 14 (Reverse). 14 exons. 647 aa. Score = 78.74 Terminal 1011581 1011719 -2.18 - 1 0 0.00 3.94 9.41 -47.60 AA 601:647 chr6_cox_hap1_14 Internal 1027579 1027730 9.59 - 0 2 0.83 1.92 20.09 -53.20 AA 551:601 chr6_cox_hap1_14 Internal 1027953 1028081 0.91 - 0 0 4.41 6.21 3.94 -45.15 AA 508:550 chr6_cox_hap1_14 Internal 1028662 1028789 2.68 - 2 0 0.93 2.48 13.16 -44.80 AA 465:507 chr6_cox_hap1_14 Internal 1034017 1034094 8.28 - 2 1 3.89 4.65 9.50 -27.30 AA 439:465 chr6_cox_hap1_14 Internal 1035644 1035707 1.19 - 0 1 0.79 4.84 6.51 -22.40 AA 418:439 chr6_cox_hap1_14 Internal 1036336 1036578 13.76 - 0 0 1.60 2.81 26.08 -85.05 AA 337:417 chr6_cox_hap1_14 Internal 1044195 1044386 13.24 - 0 0 2.22 3.99 20.88 -67.20 AA 273:336 chr6_cox_hap1_14 Internal 1045198 1045299 2.01 - 0 0 1.29 1.75 11.80 -35.70 AA 239:272 chr6_cox_hap1_14 Internal 1046399 1046569 1.77 - 0 0 3.91 3.86 9.77 -59.85 AA 182:238 chr6_cox_hap1_14 Internal 1046984 1047118 7.59 - 0 0 3.01 5.33 11.62 -47.25 AA 137:181 chr6_cox_hap1_14 Internal 1050580 1050740 8.96 - 2 0 0.32 0.99 21.29 -56.35 AA 83:136 chr6_cox_hap1_14 Internal 1054490 1054693 10.78 - 2 1 3.61 2.74 19.50 -71.40 AA 15: 83 chr6_cox_hap1_14 First 1055776 1055818 0.17 - 0 1 3.40 2.95 2.85 -15.05 AA 1: 15 chr6_cox_hap1_14 >chr6_cox_hap1_14|SGP_v1.0_predicted_cDNA_14|1941_NN ATGGAATCGGGGAGCGCTGAGGCGGCCGATGCCGGGAGCGTGGGTTGCCAGATCATACAC CCGCCCTGGGAAGGGGGCATCAGGTACCGGGGCCTGACTCGGGACCAGGTGAAGGCTATC AACTTCCTGCCAGTGGACTATGAGATTGAGTATGTGTGCCGGGGGGAGCGCGAGGTGGTG GGGCCCAAGGTCCGCAAGTGCCTGGCCAACGGCTCCTGGACAGATATGGACACACCCAGC CGCTGTGAACGGCGCGCAGTGTACATCGGGGCACTGTTTCCCATGAGCGGGGGCTGGCCA GGGGGCCAGGCCTGCCAGCCCGCGGTGGAGATGGCGCTGGAGGACGTGAATAGCCGCAGG GACATCCTGCCGGACTATGAGCTCAAGCTCATCCACCACGACAGCAAGTGTGATCCAGGC CAAGCCACCAAGTACCTATATGAGCTGCTCTACAACGACCCTATCAAGATCATCCTTATG CCTGGCTGCAGCTCTGTCTCCACGCTGGTGGCTGAGGCTGCTAGGATGTGGAACCTCATT GTGCTTTCCTATGGCTCCAGCTCACCAGCCCTGTCAAACCGGCAGCGTTTCCCCACTTTC TTCCGAACGCACCCATCAGCCACACTCCACAACCCTACCCGCGTGAAACTCTTTGAAAAG TGGGGCTGGAAGAAGATTGCTACCATCCAGCAGACCACTGAGGTCTTCACTTCGACTCTG GACGACCTGGAGGAACGAGTGAAGGAGGCTGGAATTGAGATTACTTTCCGCCAGAGTTTC TTCTCAGATCCAGCTGTGCCCGTCAAAAACCTGAAGGTGTACAAGGAGCGTCTCTTTGGG AAGAAGTACGTCTGGTTCCTCATTGGGTGGTATGCTGACAATTGGTTCAAGATCTACGAC CCTTCTATCAACTGCACAGTGGATGAGATGACTGAGGCGGTGGAGGGCCACATCACAACT GAGATTGTCATGCTGAATCCTGCCAATACCCGCAGCATTTCCAACATGACATCCCAGGAA TTTGTGGAGAAACTAACCAAGCGACTGAAAAGACACCCTGAGGAGACAGGAGGCTTCCAG GAGGCACCGCTGGCCTATGATGCCATCTGGGCCTTGGCACTGGCCCTGAACAAGACATCT GGAGGAGGCGGCCGTTCTGGTGTGCGCCTGGAGGACTTCAACTACAACAACCAGACCATT ACCGACCAAATCTACCGGGCAATGAACTCTTCGTCCTTTGAGGGTGTCTCTGGCCATGTG GTGTTTGATGCCAGCGGCTCTCGGATGGCATGGACGCTTATCGAGCAGCTTCAGGGTGGC AGCTACAAGAAGATTGGCTACTATGACAGCACCAAGGATGATCTTTCCTGGTCCAAAACA GATAAATGGATTGGCATTTTCTATGGTTACAAGGGGCTGCTGCTGCTGCTGGGAATCTTC CTTGCTTATGAGACCAAGAGTGTGTCCACTGAGAAGATCAATGATCACCGGGCTGTGGGC ATGGCTATCTACAATGTGGCAGTCCTGTGCCTCATCACTGCTCCTGTCACCATGATTCTG TCCAGCCAGCAGGATGCAGCCTTTGCCTTTGCCTCTCTTGCCATAGTTTTCTCCTCCTAT ATCACTCTTGTTGTGCTCTTTGTGCCCAAGATGCGCAGGCTGATCACCCGAGGGGAATGG CAGTCGGAGGCGCAGGACACCATGAAGACAGGGTCATCGACCAACAACAACGAGGAGGAG AAGTCCCGGCTGTTGGAGAAGGAGAACCGTGAACTGGAAAAGATCATTGCTGAGGTGCGG GGAGTTAATCCTCAGCACTGCCCAGGTAATGGCTCCGTAAGAGACAAGGATGAGGCTGAG AGGCACAACCAAGATGAAGACACTGGCAACAGCCACCTGGATCTCATTGTAGGAGGTGTC TTCACAGGAGAGTCGAATTAG >chr6_cox_hap1_14|SGP_v1.0_predicted_protein_14|647_AA MESGSAEAADAGSVGCQIIHPPWEGGIRYRGLTRDQVKAINFLPVDYEIEYVCRGEREVV GPKVRKCLANGSWTDMDTPSRCERRAVYIGALFPMSGGWPGGQACQPAVEMALEDVNSRR DILPDYELKLIHHDSKCDPGQATKYLYELLYNDPIKIILMPGCSSVSTLVAEAARMWNLI VLSYGSSSPALSNRQRFPTFFRTHPSATLHNPTRVKLFEKWGWKKIATIQQTTEVFTSTL DDLEERVKEAGIEITFRQSFFSDPAVPVKNLKVYKERLFGKKYVWFLIGWYADNWFKIYD PSINCTVDEMTEAVEGHITTEIVMLNPANTRSISNMTSQEFVEKLTKRLKRHPEETGGFQ EAPLAYDAIWALALALNKTSGGGGRSGVRLEDFNYNNQTITDQIYRAMNSSSFEGVSGHV VFDASGSRMAWTLIEQLQGGSYKKIGYYDSTKDDLSWSKTDKWIGIFYGYKGLLLLLGIF LAYETKSVSTEKINDHRAVGMAIYNVAVLCLITAPVTMILSSQQDAAFAFASLAIVFSSY ITLVVLFVPKMRRLITRGEWQSEAQDTMKTGSSTNNNEEEKSRLLEKENRELEKIIAEVR GVNPQHCPGNGSVRDKDEAERHNQDEDTGNSHLDLIVGGVFTGESN* # Gene 15 (Forward). 6 exons. 137 aa. Score = 24.84 First 1059431 1059558 10.64 + 0 2 6.25 1.11 14.24 -44.80 AA 1: 43 chr6_cox_hap1_15 Internal 1082538 1082749 8.57 + 1 1 3.39 5.20 15.81 -74.20 AA 43:114 chr6_cox_hap1_15 Internal 1090721 1090741 4.24 + 2 1 6.22 4.03 1.54 -7.35 AA 114:121 chr6_cox_hap1_15 Internal 1090982 1091002 4.29 + 2 1 5.69 4.04 2.15 -7.35 AA 121:128 chr6_cox_hap1_15 Internal 1093779 1093799 1.05 + 2 1 6.92 2.50 0.12 -7.35 AA 128:135 chr6_cox_hap1_15 Terminal 1110583 1110590 -3.95 + 2 0 5.53 0.00 0.00 -1.75 AA 135:137 chr6_cox_hap1_15 >chr6_cox_hap1_15|SGP_v1.0_predicted_cDNA_15|411_NN ATGGCGAGCGCCGGAGTCTCCTCAGCTGCCGCTTCACAAAAGAGGTACCAGGTCCGCTCC AAACGAGCACACAAGCAGCACCAGGAGCGGCAGAAGAAGGAGGCGGCAGCAGTGGACAAG GGGAGAGGGGTGGTTCATCTCTACAGAAATGGCAAGGACCAAGATGGAGACCAGGCACCT GAATATCGGGGCCGGACAGAGCTGCTGAAAGATGCTATTGGTGAGGGAAAGGTGACTCTC AGGATCCGGAATGTAAGGTTCTCAGATGAAGGAGGTTTCACCTGCTTCTTCCGAGATCAT TCTTACCAAGAGGAGGCAGCAATGGAATTGAAAGTAGAAGGAAAACTTCGAGCAGAGATA GAGAATCTCCACCGGACTTTTGGGCAATTCCTTGAAGAGCTACCCCCTTGA >chr6_cox_hap1_15|SGP_v1.0_predicted_protein_15|137_AA MASAGVSSAAASQKRYQVRSKRAHKQHQERQKKEAAAVDKGRGVVHLYRNGKDQDGDQAP EYRGRTELLKDAIGEGKVTLRIRNVRFSDEGGFTCFFRDHSYQEEAAMELKVEGKLRAEI ENLHRTFGQFLEELPP* # Gene 16 (Forward). 5 exons. 252 aa. Score = 39.51 First 1143937 1144000 -0.33 + 0 1 3.32 3.65 2.82 -22.40 AA 1: 22 chr6_cox_hap1_16 Internal 1144131 1144400 21.21 + 2 1 2.62 3.28 30.44 -94.50 AA 22:112 chr6_cox_hap1_16 Internal 1144646 1144921 15.80 + 2 1 -4.63 1.71 36.54 -96.60 AA 112:204 chr6_cox_hap1_16 Internal 1145920 1146036 2.17 + 2 1 4.83 3.03 7.33 -40.95 AA 204:243 chr6_cox_hap1_16 Terminal 1164508 1164536 0.66 + 2 0 2.89 0.00 6.94 -9.10 AA 243:252 chr6_cox_hap1_16 >chr6_cox_hap1_16|SGP_v1.0_predicted_cDNA_16|756_NN ATGGCGCCCCGAAGCCTCCTCCTGCTGCTCTCAGGGGCCCTGGCCCTGACCGATACTTGG GCGGGCTCCCACTCCTTGAGGTATTTCAGCACCGCTGTGTCGCGGCCCGGCCGCGGGGAG CCCCGCTACATCGCCGTGGAGTACGTAGACGACACGCAATTCCTGCGGTTCGACAGCGAC GCCGCGATTCCGAGGATGGAGCCGCGGGAGCCGTGGGTGGAGCAAGAGGGGCCGCAGTAT TGGGAGTGGACCACAGGGTACGCCAAGGCCAACGCACAGACTGACCGAGTGGCCCTGAGG AACCTGCTCCGCCGCTACAACCAGAGCGAGGCTGGGTCTCACACCCTCCAGGGAATGAAT GGCTGCGACATGGGGCCCGACGGACGCCTCCTCCGCGGGTATCACCAGCACGCGTACGAC GGCAAGGATTACATCTCCCTGAACGAGGACCTGCGCTCCTGGACCGCGGCGGACACCGTG GCTCAGATCACCCAGCGCTTCTATGAGGCAGAGGAATATGCAGAGGAGTTCAGGACCTAC CTGGAGGGCGAGTGCCTGGAGTTGCTCCGCAGATACTTGGAGAATGGGAAGGAGACGCTA CAGCGCGCAGAGCAGTCTCCCCAGCCCACCATCCCCATCGTGGGCATCGTTGCTGGCCTT GTTGTCCTTGGAGCTGTGGTCACTGGAGCTGTGGTCGCTGCTGTGATGTGGAGGAAGAAG AGCTCAGGACACAGAGAATACTACTACTACTACTAA >chr6_cox_hap1_16|SGP_v1.0_predicted_protein_16|252_AA MAPRSLLLLLSGALALTDTWAGSHSLRYFSTAVSRPGRGEPRYIAVEYVDDTQFLRFDSD AAIPRMEPREPWVEQEGPQYWEWTTGYAKANAQTDRVALRNLLRRYNQSEAGSHTLQGMN GCDMGPDGRLLRGYHQHAYDGKDYISLNEDLRSWTAADTVAQITQRFYEAEEYAEEFRTY LEGECLELLRRYLENGKETLQRAEQSPQPTIPIVGIVAGLVVLGAVVTGAVVAAVMWRKK SSGHREYYYYY* # Gene 17 (Forward). 5 exons. 294 aa. Score = 55.12 First 1212863 1213070 22.07 + 0 1 3.79 0.71 28.88 -72.80 AA 1: 70 chr6_cox_hap1_17 Internal 1248222 1248491 26.62 + 2 1 3.99 1.66 34.67 -94.50 AA 70:160 chr6_cox_hap1_17 Internal 1248706 1248993 8.31 + 2 1 -5.37 0.41 33.91 -100.80 AA 160:256 chr6_cox_hap1_17 Internal 1249593 1249650 -2.35 + 2 2 4.05 0.53 4.42 -20.30 AA 256:275 chr6_cox_hap1_17 Terminal 1287409 1287466 0.47 + 1 0 6.44 0.00 4.29 -19.25 AA 275:294 chr6_cox_hap1_17 >chr6_cox_hap1_17|SGP_v1.0_predicted_cDNA_17|882_NN ATGTCCCGGCCCGGCCGCGCGGATCCCCGCTTCCTCTCCGTGGGCGACGTGGACGACACG CAGTGCGTGCGGCTCGACAGCGACGCCACGAGTCCCAGGATGGAGCCGGAGGGGCCGGAA TATTGGGAAGAGGAGACAGGGACCGCCAAGGCCAAAGCACAGTTTTACCGAGTGAACCTG CGGACCCTGAGCGGCTACTACAACCAGAGCTCCCACTCCATGAGGTATTTCAGCGCCGCC GTGTCCCGGCCCGGCCGCGGGGAGCCCCGCTTCATCGCCATGGGCTACGTGGACGACACG CAGTTCGTGCGGTTCGACAGCGACTCGGCGTGTCCGAGGATGGAGCCGCGGGCGCCGTGG GTGGAGCAGGAGGGGCCAGAGTATTGGGAAGAGGAGACACGGAACACCAAGGCCCACGCA CAGACTGACAGAATGAACCTGCAGACCCTGCGCGGCTACTACAACCAGAGCGAGGCCAGG GTGGGGCCAGGTTCTCATACCCTCCAGTGGATGATTGGCTGCGACCTGGGGTCCGACGGA CGCCTCCTCCGCGGGTATGAACAGTATGCCTACGATGGCAAGGATTACCTCGCCCTGAAC GAGGACCTGCGCTCCTGGACCGCAGCGGACACTGCGGCTCAGATCTCCAAGCGCAAGTGT GAGGCGGCCAATGTGGCTGAACAAAGGAGAGCCTACCTGGAGGGCACGTGCGTGGAGTGG CTCCACAGATACCTGGAGAACGGGAAGGAGATGCTGCAGCGCGCGGACCCCCCCAAGACA CACGTGACCCACCACCCTGTCTTTGACTATGAGGCCACCCTGAGGGCCGATGAGGGCGTC GTATCTGGTTTCCAGTGGGGTCTAAAGACGCCATCAGAGTGA >chr6_cox_hap1_17|SGP_v1.0_predicted_protein_17|294_AA MSRPGRADPRFLSVGDVDDTQCVRLDSDATSPRMEPEGPEYWEEETGTAKAKAQFYRVNL RTLSGYYNQSSHSMRYFSAAVSRPGRGEPRFIAMGYVDDTQFVRFDSDSACPRMEPRAPW VEQEGPEYWEEETRNTKAHAQTDRMNLQTLRGYYNQSEARVGPGSHTLQWMIGCDLGSDG RLLRGYEQYAYDGKDYLALNEDLRSWTAADTAAQISKRKCEAANVAEQRRAYLEGTCVEW LHRYLENGKEMLQRADPPKTHVTHHPVFDYEATLRADEGVVSGFQWGLKTPSE* # Gene 18 (Forward). 4 exons. 256 aa. Score = 74.76 First 1306007 1306244 37.56 + 0 1 3.79 4.68 37.25 -83.30 AA 1: 80 chr6_cox_hap1_18 Internal 1306487 1306762 24.82 + 2 1 -5.17 0.41 45.15 -96.60 AA 80:172 chr6_cox_hap1_18 Internal 1307725 1307841 2.12 + 2 1 4.21 4.37 6.13 -40.95 AA 172:211 chr6_cox_hap1_18 Terminal 1344624 1344760 10.26 + 2 0 3.44 0.00 18.57 -46.90 AA 211:256 chr6_cox_hap1_18 >chr6_cox_hap1_18|SGP_v1.0_predicted_cDNA_18|768_NN ATGTCCCGGCCCGGCCGCGGGGAGCCCCGCTTCATCTCCGTCGGCTACGTGGACGATACG CAGTTCGTGCGGTTCGACAGCGACGACGCGAGTCCGAGAGAGGAGCCGCGGGCGCCGTGG ATGGAGCGGGAGGGGCCGGAGTATTGGGACCGGAACACACAGATCTGCAAGGCCCAAGCA CGGACTGAACGAGAGAACCTGCGGATCGCGCTCCGCTACTACAACCAGAGCGAGGGCGGT TCTCACACCATGCAGGTGATGTATGGCTGCGACGTGGGGCCCGACGGGCGCTTCCTCTGC GGGTATGAACAGCACGCCTACGACGGCAAGGATTACATCGCTCTGAACGAGGACCTGCGC TCCTGGACCGCGGCGGACATGGCAGCTCAGATCACCAAGCGCAAGTGGGAGGCGGCCCGT CGGGCGGAGCAGCGGAGAGTCTACCTGGAGGGCGAGTTCGTGGAGTGGCTCCGCAGATAC CTGGAGAACGGGAAGGAGACGCTGCAGCGCGCGGAGCCATCTTCCCAGCCCACCATCCCC ATCGTGGGCATCGTTGCTGGCCTGGTTCTACTTGTAGCTGTGGTCACTGGAGCTGTGGTC GCTGCTGTAATGTGGAGGAAGAAGAGCTCAGGTACCCACTCCATAAGGTATTTCAGCACC GCCGTGTCCCGGCCGGGTCGCGGGGAGCCCCGGTACATCGCAGTGGGCTACGTGGACGAC ACGCAGTTCGTGCGGTTCGACAGCGACGCGGCGACTCCGAGGATGTAG >chr6_cox_hap1_18|SGP_v1.0_predicted_protein_18|256_AA MSRPGRGEPRFISVGYVDDTQFVRFDSDDASPREEPRAPWMEREGPEYWDRNTQICKAQA RTERENLRIALRYYNQSEGGSHTMQVMYGCDVGPDGRFLCGYEQHAYDGKDYIALNEDLR SWTAADMAAQITKRKWEAARRAEQRRVYLEGEFVEWLRRYLENGKETLQRAEPSSQPTIP IVGIVAGLVLLVAVVTGAVVAAVMWRKKSSGTHSIRYFSTAVSRPGRGEPRYIAVGYVDD TQFVRFDSDAATPRM* # Gene 19 (Forward). 4 exons. 240 aa. Score = 63.54 First 1350362 1350497 9.89 + 0 1 6.95 0.04 14.11 -47.60 AA 1: 46 chr6_cox_hap1_19 Internal 1358792 1359061 30.72 + 2 1 0.97 4.61 37.73 -94.50 AA 46:136 chr6_cox_hap1_19 Internal 1359303 1359578 28.10 + 2 1 -3.15 0.41 45.31 -96.60 AA 136:228 chr6_cox_hap1_19 Terminal 1398180 1398217 -5.17 + 2 0 3.93 0.00 2.34 -12.25 AA 228:240 chr6_cox_hap1_19 >chr6_cox_hap1_19|SGP_v1.0_predicted_cDNA_19|720_NN ATGGCGGCTCAGATTACCCAGCGCAAGTGGGAGGCGGCCCATGAGGCGGAGCAGCAGAGA GCCTACCTGGAGGGCACGTGCGTGGAGTGGCTCCGCAGATACCTGGAGAACGGGAAGGAG ACGCTGCAGCGCACTGGCTCCCACTCCATGAGGTATTTCTTCACATCCGTGTCCCGGCCC GGCCGCGGGGAGCCCCGCTTCATCGCCGTGGGCTACGTGGACGACACGCAGTTCGTGCGG TTCGACAGCGACGCCGCGAGCCAGAAGATGGAGCCGCGGGCGCCGTGGATAGAGCAGGAG GGGCCGGAGTATTGGGACCAGGAGACACGGAATATGAAGGCCCACTCACAGACTGACCGA GCGAACCTGGGGACCCTGCGCGGCTACTACAACCAGAGCGAGGACGGTTCTCACACCATC CAGATAATGTATGGCTGCGACGTGGGGCCGGACGGGCGCTTCCTCCGCGGGTACCGGCAG GACGCCTACGACGGCAAGGATTACATCGCCCTGAACGAGGACCTGCGCTCTTGGACCGCG GCGGACATGGCAGCTCAGATCACCAAGCGCAAGTGGGAGGCGGTCCATGCGGCGGAGCAG CGGAGAGTCTACCTGGAGGGCCGGTGCGTGGACGGGCTCCGCAGATACCTGGAGAACGGG AAGGAGACGCTGCAGCGCACGGCTGTTGACTTCATTTTTGAACAAATTACAGTTACATAA >chr6_cox_hap1_19|SGP_v1.0_predicted_protein_19|240_AA MAAQITQRKWEAAHEAEQQRAYLEGTCVEWLRRYLENGKETLQRTGSHSMRYFFTSVSRP GRGEPRFIAVGYVDDTQFVRFDSDAASQKMEPRAPWIEQEGPEYWDQETRNMKAHSQTDR ANLGTLRGYYNQSEDGSHTIQIMYGCDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTA ADMAAQITKRKWEAVHAAEQRRVYLEGRCVDGLRRYLENGKETLQRTAVDFIFEQITVT* # Gene 20 (Forward). 7 exons. 349 aa. Score = 47.40 First 1422604 1422667 1.43 + 0 1 3.32 3.65 4.11 -22.40 AA 1: 22 chr6_cox_hap1_20 Internal 1422798 1423067 22.92 + 2 1 2.62 3.65 31.28 -94.50 AA 22:112 chr6_cox_hap1_20 Internal 1423316 1423591 18.36 + 2 1 -4.27 0.41 39.44 -96.60 AA 112:204 chr6_cox_hap1_20 Internal 1458749 1458782 -6.47 + 2 2 4.97 -1.76 2.14 -11.90 AA 204:215 chr6_cox_hap1_20 Internal 1477905 1478059 2.97 + 1 1 2.88 1.75 13.33 -54.25 AA 215:267 chr6_cox_hap1_20 Internal 1483483 1483613 3.50 + 2 0 6.05 -1.06 12.15 -45.85 AA 267:310 chr6_cox_hap1_20 Terminal 1484974 1485090 4.70 + 0 0 3.00 0.00 14.40 -39.90 AA 311:349 chr6_cox_hap1_20 >chr6_cox_hap1_20|SGP_v1.0_predicted_cDNA_20|1047_NN ATGGCGCCCCGAACCCTCCTCCTGCTGCTCTCGGGGACCCTGGCCCTGGCCGAGACCTGG GCGGGCTCCCACTCCATGAGGTATTTCAGCACCGCCGTTTCCTGGCCGGGCCGCGGGGAG CCCAGCTTCATTGCCGTGGGCTACGTGGACGACACGCAGTTCGTGCGGGTCGACAGTGAC GCCGTGAGTCTGAGGATGAAGACGCGGGCGCGGTGGGTGGAGCAGGAGGGGCCGGAGTAT TGGGACCTACAGACACTGGGCGCCAAGGCCCAGGCACAGACTGACCGAGTGAACCTGCGG ACCCTGCTCCGCTACTACAACCAGAGCGAGGCGGGGTATCACATCCTCCAGGGAATGTTT GGCTGCGACCTGGGGCCCGACGGGCGTCTCCTCCGCGGGTATGAGCAGTATGCCTACGAC GGCAAGGATTACATCGCCCTGAACGAGGACCTGCGCTCCTGGACCGCCGCGGATACCGCG GCTCAGATTACCCAGCGCAAGTATGAGGCGGCCAATGTGGCTGAGCAAAGGAGAGCCTAC CTGGAGGGCACCTGCATGGAGTGGCTCCGCAGACACCTGGAGAACGGGAAGGAGACGCTG CAGCGCGCGGGAAATCAAATTCTGGAATTAGAGATCATATCTCGACCCGACCGCATGTCT GTCATGGACCTCGCCAATACTTGCTCCAGCTTTCAGTCGGACCTGGATTTCTGTTCAGAT TGCGGCTCGGTCCTGCCTCTGCCCGGGGCTCAGGATACGGTCACCTGTATTCGCTGTGGC TTCAACATCAACGTTCGGGCGCCTGCGCGCTGTCACGTTACGGCGGAACTAATCCAGCGA CGCCTGCGCTTTGACGCATTTGGTGCCGTGGAAGGGAAAAAGGGGGACTGCAGTATGCGT CACACCCGGAAGCGGCGAGCCGGAAGTGGGGAGAACCGGAGCCTTACCATCAAACTTCGG AAACGGAAGCCAGAGAAAAAGGTAGAATGGACAAGTGACACTGTGGACAATGAACACATG GGCCGCCGCTCATCCAAATGTGAGTAA >chr6_cox_hap1_20|SGP_v1.0_predicted_protein_20|349_AA MAPRTLLLLLSGTLALAETWAGSHSMRYFSTAVSWPGRGEPSFIAVGYVDDTQFVRVDSD AVSLRMKTRARWVEQEGPEYWDLQTLGAKAQAQTDRVNLRTLLRYYNQSEAGYHILQGMF GCDLGPDGRLLRGYEQYAYDGKDYIALNEDLRSWTAADTAAQITQRKYEAANVAEQRRAY LEGTCMEWLRRHLENGKETLQRAGNQILELEIISRPDRMSVMDLANTCSSFQSDLDFCSD CGSVLPLPGAQDTVTCIRCGFNINVRAPARCHVTAELIQRRLRFDAFGAVEGKKGDCSMR HTRKRRAGSGENRSLTIKLRKRKPEKKVEWTSDTVDNEHMGRRSSKCE* # Gene 21 (Reverse). 8 exons. 535 aa. Score = 41.85 Terminal 1487495 1488075 16.18 - 2 0 0.00 3.59 44.64 -202.30 AA 342:535 chr6_cox_hap1_21 Internal 1489541 1489632 0.85 - 1 1 4.37 3.24 5.44 -32.20 AA 311:342 chr6_cox_hap1_21 Internal 1489840 1489862 -0.82 - 0 2 4.06 3.92 0.46 -8.05 AA 304:311 chr6_cox_hap1_21 Internal 1491607 1491748 6.82 - 1 0 4.21 1.75 13.67 -49.70 AA 256:303 chr6_cox_hap1_21 Internal 1525428 1525450 4.95 - 0 2 2.64 7.24 2.56 -8.05 AA 249:256 chr6_cox_hap1_21 Internal 1526853 1527083 7.19 - 0 0 4.73 4.37 15.16 -80.85 AA 172:248 chr6_cox_hap1_21 Internal 1528064 1528159 4.35 - 0 0 4.28 3.91 7.54 -33.60 AA 140:171 chr6_cox_hap1_21 First 1528805 1529221 2.33 - 0 0 2.99 1.30 25.21 -145.95 AA 1:139 chr6_cox_hap1_21 >chr6_cox_hap1_21|SGP_v1.0_predicted_cDNA_21|1605_NN ATGGCCAGTGGGCAGTTTGTGAACAAACTGCAAGAGGAAGTGATCTGCCCCATCTGCCTG GACATTCTGCAGAAACCTGTCACCATTGACTGTGGGCACAATTTCTGCCTCAAATGCATC ACTCAGATTGGGGAAACATCATGTGGATTTTTCAAATGTCCCCTCTGCAAAACTTCCGTA AGGAAGAACGCAATCAGGTTCAACTCGCTGTTGCGGAATCTGGTGGAGAAAATCCAAGCT CTACAAGCCTCTGAGGTGCAGTCCAAAAGGAAAGAGGCTACATGCCCGAGGCACCAGGAG ATGTTCCATTATTTCTGCGAGGATGATGGGAAGTTCCTCTGTTTTGTGTGTCGTGAATCC AAGGACCACAAATCCCATAATGTCAGCTTGATCGAAGAAGCTGCCCAGAATTATCAGGGG CAGATTCAAGAGCAGATCCAAGTCTTGCAGCAAAAGGAGAAGGAGACAGTACAAGTGAAG GCACAAGGTGTACACAGGGTCGATGTCTTCACGGACCAGGTAGAACATGAGAAGCAAAGG ATCCTCACAGAATTTGAACTCCTGCATCAAGTCCTAGAGGAGGAGAAGAATTTCCTGCTA TCACGGATTTACTGGCTGGGTCATGAGGGAACGGAAGCAGGGAAACACTATGTTGCCTCC ACTGAGCCACAGTTGAACGATCTCAAGAAGCTCATTGATTCCCTGAAGACCAAGCAGAAC ATGCCACCCAGGCAGCTGCTGGAGGATATCAAAGTCGTCTTGTGCAGCCTGAGGTCTAAT GTGCGGCTGGCGGTGGAGGTGCGAATCAGCCGCGAGCTGCGAGAGAAGCTGGCTGAGCCT GGGGCCCGTGCGGGGAGACGCCGAGGGGGGCGCATCCCCACCATGGGCTGCCTGGACCTG CCCGGAGAGGATATGAGGAAGACATGGAGACGATTTGAAGTCCCAACATCCAAGTCATCT AATTCAGAGGATGATCTCCCTGAAGATTATCCAGTGGTCAAAAAAATGCTTCATAGACTG ACAGCCGACCTGACCCTGGACCCTGGGACCGCACACCGCCGCCTGCTCATCTCCGCCGAC CGCCGCAGCGTACAACTGGCCCCACCAGGGACGCCCGCGCCCCCTGACGGCCCCAAGCGC TTCGATCAGCTCCCAGCTGTGCTGGGTGCGCAGGGCTTCGGGGCCGGCCGCCACTGCTGG GAGGTGGAGACTGCGGACGCCGCCTCCTGCAGAGACTCTTCTGGGGAGGATGCGGACGAC GAGGAGAGCCACTATGCAGTGGGCGCGGCCGGGGAATCAGTGCAACGCAAGGGCTGCGTA AGGCTGTGCCCTGCGGGGGCCGTGTGGGCCGTGGAGGGCCGCGGCGGCCGCCTGTGGGCC CTCACGGCACCCGAACCCACCCTGCTGGGCGGTGTTGAGCCCCCGCCGCGGCGCATTCGC GTGGACCTGGACTGGGAGCGGGGCCGCGTGGCCTTCTACGACGGCCGCTCACTCGACCTG CTTTACGCCTTCCAGGCGCCTGGCCCCCTGGGGGAGCGCATCTTCCCGCTGTTCTGCACC TGCGACCCTCGTGCTCCGCTCCGCATTGTACCAGCGGAAAGCTGA >chr6_cox_hap1_21|SGP_v1.0_predicted_protein_21|535_AA MASGQFVNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSV RKNAIRFNSLLRNLVEKIQALQASEVQSKRKEATCPRHQEMFHYFCEDDGKFLCFVCRES KDHKSHNVSLIEEAAQNYQGQIQEQIQVLQQKEKETVQVKAQGVHRVDVFTDQVEHEKQR ILTEFELLHQVLEEEKNFLLSRIYWLGHEGTEAGKHYVASTEPQLNDLKKLIDSLKTKQN MPPRQLLEDIKVVLCSLRSNVRLAVEVRISRELREKLAEPGARAGRRRGGRIPTMGCLDL PGEDMRKTWRRFEVPTSKSSNSEDDLPEDYPVVKKMLHRLTADLTLDPGTAHRRLLISAD RRSVQLAPPGTPAPPDGPKRFDQLPAVLGAQGFGAGRHCWEVETADAASCRDSSGEDADD EESHYAVGAAGESVQRKGCVRLCPAGAVWAVEGRGGRLWALTAPEPTLLGGVEPPPRRIR VDLDWERGRVAFYDGRSLDLLYAFQAPGPLGERIFPLFCTCDPRAPLRIVPAES* # Gene 22 (Reverse). 7 exons. 311 aa. Score = 10.13 Terminal 1556163 1556167 -3.87 - 2 0 0.00 5.78 0.00 -0.70 AA 310:311 chr6_cox_hap1_22 Internal 1572148 1572180 1.15 - 2 1 4.37 4.73 1.51 -11.55 AA 299:310 chr6_cox_hap1_22 Internal 1573360 1573475 3.48 - 1 1 3.49 3.24 9.85 -40.60 AA 260:299 chr6_cox_hap1_22 Internal 1573790 1573812 1.01 - 0 2 4.60 4.98 0.38 -8.05 AA 253:260 chr6_cox_hap1_22 Internal 1574818 1575048 2.41 - 0 0 3.66 2.24 15.20 -80.85 AA 176:252 chr6_cox_hap1_22 Internal 1575569 1575664 0.02 - 0 0 3.56 5.46 3.82 -33.60 AA 144:175 chr6_cox_hap1_22 First 1576849 1577277 5.93 - 0 0 1.38 2.00 29.44 -150.15 AA 1:143 chr6_cox_hap1_22 >chr6_cox_hap1_22|SGP_v1.0_predicted_cDNA_22|933_NN ATGGCCTCTGCTGCCTCTGTGACCAGCCTGGCAGATGAAGTCAACTGCCCCATCTGTCAG GGTACCCTGAGGGAGCCGGTCACTATCGACTGCGGCCACAACTTCTGCCGGGCCTGCCTT ACCCGCTACTGTGAGATACCAGGCCCAGACCTGGAGGAGTCCCCTACTTGCCCACTCTGC AAAGAACCCTTCCGTCCTGGGAGCTTCCGGCCCAACTGGCAGCTGGCTAACGTGGTGGAG AACATTGAGCGCCTCCAGCTGGTGTCCACACTGGGTTTGGGAGAGGAGGATGTCTGCCAA GAGCACGGAGAGAAGATCTACTTCTTCTGTGAGGATGATGAGATGCAGTTGTGCGTGGTG TGCCGGGAGGCTGGGGAGCACGCTACCCACACCATGCGCTTCCTGGAGGATGCAGCGGCT CCCTATAGGGAACAAATCCATAAGTGTCTTAAATGTCTAAGAAAAGAGAGAGAGGAGATT CAAGAAATCCAGTCAAGAGAAAATAAAAGGATGCAAGTCCTCCTGACTCAGGTGTCCACC AAGAGACAACAGGTGATTTCTGAGTTCGCACACCTGAGGAAGTTTCTAGAGGAACAGCAG AGCATCCTCTTAGCACAATTGGAGAGCCAGGATGGGGACATCTTGAGGCAACGGGATGAA TTTGATTTGCTGGTTGCTGGGGAGATCTGCCGGTTTAGTGCTCTTATTGAAGAACTGGAG GAGAAGAATGAGAGGCCAGCAAGGGAGCTCCTGACGGACATCAGAAGCACTCTAATAAGA TGTGAAACCAGAAAGTGCCGGAAACCGGTGGCTGTGTCGCCAGAGCTGGGCCAGAGGATT CGGGACTTTCCCCAGCAGGCCCTCCCGCTGCAGAGGGAGATGAAGATGTTTCTGGAAAAA CTATGCTTTGAGTTGGACTATGAGCCAGGTTGA >chr6_cox_hap1_22|SGP_v1.0_predicted_protein_22|311_AA MASAASVTSLADEVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLC KEPFRPGSFRPNWQLANVVENIERLQLVSTLGLGEEDVCQEHGEKIYFFCEDDEMQLCVV CREAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKRMQVLLTQVST KRQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEICRFSALIEELE EKNERPARELLTDIRSTLIRCETRKCRKPVAVSPELGQRIRDFPQQALPLQREMKMFLEK LCFELDYEPG* # Gene 23 (Forward). 6 exons. 352 aa. Score = 33.55 First 1580303 1580476 15.14 + 0 0 0.96 3.31 22.43 -60.90 AA 1: 58 chr6_cox_hap1_23 Internal 1583587 1583682 6.86 + 0 0 6.30 0.36 11.41 -33.60 AA 59: 90 chr6_cox_hap1_23 Internal 1584711 1585048 1.33 + 0 2 2.12 -0.19 24.35 -118.30 AA 91:203 chr6_cox_hap1_23 Internal 1585652 1585674 4.51 + 1 1 7.62 3.13 1.64 -8.05 AA 203:211 chr6_cox_hap1_23 Internal 1588243 1588637 9.99 + 2 0 4.31 1.36 28.94 -138.25 AA 211:342 chr6_cox_hap1_23 Terminal 1591636 1591665 -4.29 + 0 0 5.98 0.00 0.69 -9.45 AA 343:352 chr6_cox_hap1_23 >chr6_cox_hap1_23|SGP_v1.0_predicted_cDNA_23|1056_NN ATGGCCCCTGTGCCCCTGGGCCCGCTGGGAGAAACTTACTGCGAGGAGCACGGCGAGAAG ATCTACTTCTTCTGCGAGAACGATGCCGAGTTCCTCTGTGTGTTCTGCAGGGAGGGTCCC ACGCACCAGGCGCACACCGTGGGGTTCCTGGACGAGGCCATTCAGCCCTACCGGGATCGT CTCAGGAGTCGACTGGAAGCTCTGAGCACGGAGAGAGATGAGATTGAGGATGTAAAGTGT CAAGAAGACCAGAAGCTTCAAGTGCTGCTGACTCAGATCGAAAGCAAGAAGCATCAGGTG GAAACAGCTTTTGAGAGGCTGCAGCAGGAGCTGGAGCAGCAGCGATGTCTCCTGCTGGCC AGGCTGAGGGAGCTGGAGCAGCAGATTTGGAAGGAGAGGGATGAATATATCACAAAGGTC TCTGAGGAAGTCACCCGGCTTGGAGCCCAGGTCAAGGAGCTGGAGGAGAAGTGTCAGCAG CCAGCAAGTGAGCTTCTACAAGTGAGAGACACTTCACCACTTTGTAGGATAAGAGAGGGA CTCCACGGGGAAGGGGGTGGGCACCATGCTTTGGGCTGGAGAGAGGCAGGAAAGGGAAGT GGAGAGAGGATGTCAGAGTCAACCAGAGCAGGGGTCATCACTCTGGACCCTCAGACCGCC AGCCGGAGCCTGGTTCTCTCGGAAGACAGGAAGTCAGTGAGGTACACCCGGCAGAAGAAG AGCCTGCCAGACAGCCCCCTGCGCTTCGACGGCCTCCCGGCGGTTCTGGGCTTCCCGGGC TTCTCCTCCGGGCGCCACCGCTGGCAGGTTGACCTGCAGCTGGGCGACGGCGGCGGCTGC ACGGTGGGGGTGGCCGGGGAGGGGGTGAGGAGGAAGGGAGAGATGGGACTCAGCGCCGAG GACGGCGTCTGGGCCGTGATCATCTCGCACCAGCAGTGCTGGGCCAGCACCTCCCCGGGC ACCGACCTGCCGCTGAGCGAGATCCCGCGCGGCGTGAGAGTCGCCCTGGACTACGAGGCG GGGCAGGATCCTCTGCACAACCTGCCTTGCCCCTAA >chr6_cox_hap1_23|SGP_v1.0_predicted_protein_23|352_AA MAPVPLGPLGETYCEEHGEKIYFFCENDAEFLCVFCREGPTHQAHTVGFLDEAIQPYRDR LRSRLEALSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQQELEQQRCLLLA RLRELEQQIWKERDEYITKVSEEVTRLGAQVKELEEKCQQPASELLQVRDTSPLCRIREG LHGEGGGHHALGWREAGKGSGERMSESTRAGVITLDPQTASRSLVLSEDRKSVRYTRQKK SLPDSPLRFDGLPAVLGFPGFSSGRHRWQVDLQLGDGGGCTVGVAGEGVRRKGEMGLSAE DGVWAVIISHQQCWASTSPGTDLPLSEIPRGVRVALDYEAGQDPLHNLPCP* # Gene 24 (Reverse). 8 exons. 358 aa. Score = 61.59 Terminal 1600579 1600595 -5.03 - 2 0 0.00 4.92 0.33 -4.90 AA 353:358 chr6_cox_hap1_24 Internal 1602832 1602951 4.65 - 2 1 0.21 6.27 10.82 -42.00 AA 313:353 chr6_cox_hap1_24 Internal 1605564 1605596 5.26 - 2 1 4.94 6.08 2.01 -11.55 AA 302:313 chr6_cox_hap1_24 Internal 1605815 1605930 -2.39 - 1 1 2.73 3.98 5.23 -40.60 AA 263:302 chr6_cox_hap1_24 Internal 1606411 1606433 2.99 - 0 2 2.39 7.49 1.14 -8.05 AA 256:263 chr6_cox_hap1_24 Internal 1612901 1613131 17.50 - 0 0 3.67 4.39 23.83 -80.85 AA 179:255 chr6_cox_hap1_24 Internal 1614814 1614909 4.46 - 0 0 4.00 5.88 5.38 -33.60 AA 147:178 chr6_cox_hap1_24 First 1615051 1615488 34.16 - 0 0 2.64 2.92 47.69 -153.30 AA 1:146 chr6_cox_hap1_24 >chr6_cox_hap1_24|SGP_v1.0_predicted_cDNA_24|1074_NN ATGGCCACGTCAGCCCCACTACGGAGCCTGGAAGAGGAGGTGACCTGCTCCATCTGTCTT GATTACCTGCGGGACCCTGTGACCATTGACTGTGGCCACGTCTTCTGCCGCAGCTGCACC ACAGACGTCCGCCCCATCTCAGGGAGCCGCCCCGTCTGCCCACTCTGCAAGAAGCCTTTT AAGAAGGAGAACATCCGACCCGTGTGGCAACTGGCCAGCCTGGTGGAGAACATTGAGCGG CTGAAGGTGGACAAGGGCAGGCAGCCGGGAGAGGTGACCCGGGAGCAGCAGGATGCAAAG TTGTGCGAGCGACACCGAGAGAAGCTGCACTACTACTGTGAGGACGACGGGAAGCTGCTG TGCGTGATGTGCCGGGAGTCCCGGGAGCACAGGCCCCACACGGCCGTCCTCATGGAGAAG GCCGCCCAGCCCCACAGGGAAAAAATCCTGAACCACCTGAGTACCCTAAGGAGAGACAGA GACAAAATTCAGGGCTTCCAGGCAAAGGGAGAAGCTGATATCCTGGCCGCGCTGAAGAAG CTCCAGGACCAGAGGCAGTACATTGTGGCTGAGTTTGAGCAGGGTCATCAGTTCCTGAGG GAGCGGGAGGAACACCTGCTGGAACAGCTGGCGAAGCTGGAGCAGGAGCTCACGGAGGGC AGGGAGAAGTTCAAGAGCCGGGGCGTCGGGGAGCTTGCCCGGCTGGCCCTGGTCATCTCC GAACTGGAGGGCAAGGCGCAGCAGCCAGCTGCAGAGCTCATGCAGGACACGAGAGACTTC CTAAACAGGTATCCACGGAAGAAGTTCTGGGTTGGGAAACCCATTGCTCGAGTGGTTAAA AAAAAGACCGGAGAATTCTCAGATAAACTCCTCTCTCTGCAACGAGGCCTGAGGGAATTC CAGGGGAAGCTGCTGAGAGACTTGGAATATAAGACAGTGAGCGTCACCCTGGACCCACAG TCGGCCAGTGGGTACCTGCAGCTGTCAGAGGACTGGAAGTGCGTGACCTACACCAGCCTG TACAAGAGTGCCTACCTGCACCCCCAGCAGTTTGACTTGGTGCCCTTGAGCTGA >chr6_cox_hap1_24|SGP_v1.0_predicted_protein_24|358_AA MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPF KKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLL CVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAALKK LQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLALVIS ELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQRGLREF QGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDLVPLS* # Gene 25 (Forward). 11 exons. 616 aa. Score = 73.18 First 1676014 1676077 -2.83 + 0 1 2.22 4.10 1.72 -22.40 AA 1: 22 chr6_cox_hap1_25 Internal 1676195 1676464 29.47 + 2 1 2.72 4.10 35.45 -94.50 AA 22:112 chr6_cox_hap1_25 Internal 1676731 1676878 2.98 + 2 2 -1.85 -0.71 20.58 -51.80 AA 112:161 chr6_cox_hap1_25 Internal 1708710 1708769 1.36 + 1 2 6.14 3.65 2.20 -21.00 AA 161:181 chr6_cox_hap1_25 Internal 1730639 1730732 1.90 + 1 0 4.83 4.11 5.19 -32.90 AA 181:212 chr6_cox_hap1_25 Internal 1745822 1746061 7.30 + 0 0 1.46 1.50 22.83 -84.00 AA 213:292 chr6_cox_hap1_25 Internal 1747072 1747167 7.75 + 0 0 4.49 2.67 11.52 -33.60 AA 293:324 chr6_cox_hap1_25 Internal 1752041 1752229 15.79 + 0 0 4.19 -0.25 25.45 -66.15 AA 325:387 chr6_cox_hap1_25 Internal 1756202 1756224 4.46 + 0 2 6.94 3.28 2.19 -8.05 AA 388:395 chr6_cox_hap1_25 Internal 1756799 1756914 2.06 + 1 1 4.76 3.33 7.31 -40.60 AA 395:434 chr6_cox_hap1_25 Terminal 1758006 1758553 2.94 + 2 0 2.78 0.00 34.27 -190.75 AA 434:616 chr6_cox_hap1_25 >chr6_cox_hap1_25|SGP_v1.0_predicted_cDNA_25|1848_NN ATGGCTCCCCGAACGCTCCTCCTGCTGCTCTTGGGGGCCCTGGCCCTGACCGAGACCTGG GCCGGCTCCCACTCCTTGAGGTATTTCAGCACCGCAGTGTCCCAGCCCGGCCGCGGGGAG CCCCGGTTCATCGCCGTGGGCTACGTGGACGACACAGAGTTCGTGCGGTTCGACAGCGAC TCCGTGAGTCCGAGGATGGAGCGGCGGGCGCCGTGGGTGGAGCAGGAGGGGCTGGAGTAT TGGGACCAGGAGACACGGAACGCCAAGGGCCACGCGCAGATTTACCGAGTGAACCTGCGG ACCCTGCTCCGCTATTACAACCAGAGCGAGGCCGAGGAAGCATGGCTGCGACGTGGGCCC GACAGGCGCCTCCTCCGCAGGTATGAACAGTTCGCCTACGATGGCAAGGATTACATCGCC CTGAACGAGGACCTGCACTCCTGGACCGCCGCGAACACAGCGGCTCAGATCTCCCAGCAC AAAGTTCTCACCACCTCCTCCCAGGCTAAATCCTTCATGTTGCAGGAGACAGAGAATCCC AGCTCAGAGACTGATGTCTATATCATGAATGCGCTAAGAAAGGGAGAATCACGAGTGGAA TCCAGTATCAGTAGCTGGGAGCAAAAGACACTTGCGACATCCCGCTACCGCAGTCTCCGA CCTAATCGGCAACTAGGCAGTATGGTGGAAATTGCCAAGCAGCTCCAGGCCGTCAAGCGG AAGATCCGGGATGAGAGCCTCTGCCCCCAACACCATGAGGCCCTCAGCCTTTTCTGTTAT GAGGACCAGGAGGCTGTATGCTTGATATGTGCAATTTCCCACACCCACCGGGCCCACACC GTTGTGCCACTGGACGATGCTACACAGGAGTACAAGGAAAAACTGCAGAAGTGTCTGGAG CCCCTGGAACAGAAGCTGCAGGAGATCACTCGCTGCAAGTCCTCTGAGGAGAAGAAGCCT GGTGAGCTCAAGAGACTAGTGGAAAGTCGCCGACAGCAGATCTTGAGGGAGTTTGAAGAG CTTCATAGGCGGCTGGATGAAGAGCAGCAGGTGTTGCTTTCACGACTGGAAGAAGAGGAA CAGGACATTCTGCAGCGACTCCGAGAAAATGCTGCTCACCTTGGGGACAAGCGCCGGGAC CTGGCCCACTTGGCTGCCGAGGATGTCAAAAGTACCCTGGAAAAATGTGAAAAGGTGAAG ACCATGGAGGTGACTTCAGTATCCATAGAGCTGGAAAAGAACTTCAGCAATTTTCCCCGA CAGTACTTTGCCCTAAGGAAAATCCTTAAACAGCTAATTGCGGATGTGACCCTGGACCCT GAGACAGCTCATCCTAACCTAGTCCTGTCAGAGGATCGTAAGAGCGTCAAGTTCGTGGAG ACAAGACTCCGGGATCTCCCTGACACACCAAGGCGTTTCACCTTCTACCCTTGCGTCCTG GCTACTGAGGGTTTCACCTCAGGTCGACACTACTGGGAGGTGGAGGTGGGCGACAAGACC CACTGGGCAGTGGGTGTATGCCGGGACTCCGTGAGCCGAAAGGGCGAGTTGACTCCACTC CCTGAGACTGGCTACTGGCGGGTGCGGCTATGGAATGGGGACAAATATGCAGCCACCACC ACACCTTTTACCCCTTTGCACATCAAGGTGAAACCCAAGCGGGTAGGCATATTCCTAGAC TATGAGGCCGGCACACTGTCTTTCTACAATGTCACAGACCGCTCTCATATCTACACCTTC ACTGATACTTTTACTGAGAAACTTTGGCCCCTCTTCTACCCAGGCATCCGGGCTGGACGG AAGAATGCTGCACCACTTACCATCAGGCCCCCAACAGATTGGGAGTGA >chr6_cox_hap1_25|SGP_v1.0_predicted_protein_25|616_AA MAPRTLLLLLLGALALTETWAGSHSLRYFSTAVSQPGRGEPRFIAVGYVDDTEFVRFDSD SVSPRMERRAPWVEQEGLEYWDQETRNAKGHAQIYRVNLRTLLRYYNQSEAEEAWLRRGP DRRLLRRYEQFAYDGKDYIALNEDLHSWTAANTAAQISQHKVLTTSSQAKSFMLQETENP SSETDVYIMNALRKGESRVESSISSWEQKTLATSRYRSLRPNRQLGSMVEIAKQLQAVKR KIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQEYKEKLQKCLE PLEQKLQEITRCKSSEEKKPGELKRLVESRRQQILREFEELHRRLDEEQQVLLSRLEEEE QDILQRLRENAAHLGDKRRDLAHLAAEDVKSTLEKCEKVKTMEVTSVSIELEKNFSNFPR QYFALRKILKQLIADVTLDPETAHPNLVLSEDRKSVKFVETRLRDLPDTPRRFTFYPCVL ATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGELTPLPETGYWRVRLWNGDKYAATT TPFTPLHIKVKPKRVGIFLDYEAGTLSFYNVTDRSHIYTFTDTFTEKLWPLFYPGIRAGR KNAAPLTIRPPTDWE* # Gene 26 (Forward). 3 exons. 50 aa. Score = 15.85 First 1761466 1761522 10.08 + 0 0 4.86 4.51 7.80 -19.95 AA 1: 19 chr6_cox_hap1_26 Internal 1761616 1761692 6.51 + 0 2 3.07 3.38 10.11 -26.95 AA 20: 45 chr6_cox_hap1_26 Terminal 1762090 1762105 -0.74 + 1 0 6.69 0.00 1.09 -4.55 AA 45: 50 chr6_cox_hap1_26 >chr6_cox_hap1_26|SGP_v1.0_predicted_cDNA_26|150_NN ATGGCGGGGCCGGTGAAGGACCGCGAGGCCTTCCAGAGGCTCAACTTCCTGTACCAGGAC CCCGAGAACCAGGCGCTGGCGAGGTTTTACTGCTACACTGAGAGGACCATTGCGAAGCGG CTCGTCTTGCGGCGTGTGGGCAATAAATAA >chr6_cox_hap1_26|SGP_v1.0_predicted_protein_26|50_AA MAGPVKDREAFQRLNFLYQDPENQALARFYCYTERTIAKRLVLRRVGNK* # Gene 27 (Forward). 4 exons. 352 aa. Score = 42.45 First 1885893 1886442 12.18 + 0 1 -0.23 1.81 42.21 -192.50 AA 1:184 chr6_cox_hap1_27 Internal 1906074 1906347 19.03 + 2 2 2.89 -1.16 33.66 -95.90 AA 184:275 chr6_cox_hap1_27 Internal 1906637 1906863 14.86 + 1 1 -3.65 3.49 30.42 -79.45 AA 275:351 chr6_cox_hap1_27 Terminal 1916716 1916720 -3.61 + 2 0 5.95 0.00 0.00 -0.70 AA 351:352 chr6_cox_hap1_27 >chr6_cox_hap1_27|SGP_v1.0_predicted_cDNA_27|1056_NN ATGGGATTTCCATCTAATATTGTGGCTTCAGCAGCAGAAAACATGATCAAGCTTTACAGC CTTTTTCTGAAATACGATGCAACCATGATAGAAATAAATTCAATGGTGGAAGATTCAGAT GGAGCTGCATTGTGTAAGGATGCAAAGATCAATTTTGACTCTAATTCAGCCTATCGCCAA AAGAAAATGTTTGATCTACAGGACTGGACCCAGGAAGATGAAAGGAACAAAGATGCTGCT AAGGCAGATCTCAACTACACTGGCCTCGATGGAAGTATAGGCTGCCTAGTAAATGGTGCT GGTTTGGCTATGGCCACAATGGATATAATAAAACTTCATGGAGAGACTCCAGCTAATTTC CTTGTTGGTGGTGGTGCTACAGTCCATCAAGTAACAGAAGCATTTAAGCCTATCACTTCA GATAAAAAGGTACTGGCTATTCTGGTCAACATTTGTGGAGGAATCATGCACTGTGATATT ACAGCAAAGGGTATAGTCATGGCAGTAAAAAGTTTGGAAATTAAAATACCTGTTGTGGTA CAGTTACAAGGCTCCCACTCCTTGAAGTATTTCCACACTTCCGTGTCCCGGCCCGGCCGC GGGGAGCCCCGCTTCATCTCTGTGGGCTACGTGGACGACACCCAGTTCGTGCGCTTCGAC AACGACGCCGCGAGTCCGAGGATGGTGCCGCGGGCGCCGTGGATGGAGCAGGAGGGGTCA GAGTATTGGGACCGGGAGACACGGAGCGCCAGGGACACCGCACAGATTTTCCGAGTGAAC CTGCGGACGCTGCGCGGCTACTACAATCAGAGCGAGGCCGGTGAGCGCTTCCTCCGCGGG TATGAACAGTTCGCCTACGACGGCAAGGATTATCTCACCCTGAATGAGGACCTGCGCTCC TGGACCGCGGTGGACACGGCGGCTCAGATCTCCGAGCAAAAGTCAAATGATGCCTCTGAG GCGGAGCACCAGAGAGCCTACCTGGAAGACACATGCGTGGAGTGGCTCCACAAATACCTG GAGAAGGGGAAGGAGACGCTGCTTCACCTGGTGTGA >chr6_cox_hap1_27|SGP_v1.0_predicted_protein_27|352_AA MGFPSNIVASAAENMIKLYSLFLKYDATMIEINSMVEDSDGAALCKDAKINFDSNSAYRQ KKMFDLQDWTQEDERNKDAAKADLNYTGLDGSIGCLVNGAGLAMATMDIIKLHGETPANF LVGGGATVHQVTEAFKPITSDKKVLAILVNICGGIMHCDITAKGIVMAVKSLEIKIPVVV QLQGSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGS EYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGERFLRGYEQFAYDGKDYLTLNEDLRS WTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLV* # Gene 28 (Forward). 1 exons. 41 aa. Score = 0.48 Single 1957914 1958036 0.48 + 0 0 4.26 0.00 10.59 -42.00 AA 1: 41 chr6_cox_hap1_28 >chr6_cox_hap1_28|SGP_v1.0_predicted_cDNA_28|123_NN ATGAAGGCGCAAAGCAGCCTCTCAGCCTGCAGTGATGCTACGACACCGGCAGATGGCGCT GCAAAGCTTCTCAAATGCAGCGGGAAGTCCATTTACCAACGGCTGTTGCGATCTCTTAAT TAG >chr6_cox_hap1_28|SGP_v1.0_predicted_protein_28|41_AA MKAQSSLSACSDATTPADGAAKLLKCSGKSIYQRLLRSLN* # Gene 29 (Reverse). 7 exons. 277 aa. Score = 17.67 Terminal 1963305 1963345 -5.71 - 2 0 0.00 5.36 0.51 -13.30 AA 264:277 chr6_cox_hap1_29 Internal 1963444 1963606 4.06 - 0 1 4.42 2.67 11.79 -57.05 AA 210:264 chr6_cox_hap1_29 Internal 1963807 1963862 -3.35 - 2 0 1.97 5.03 1.29 -19.60 AA 191:209 chr6_cox_hap1_29 Internal 1968800 1968994 3.59 - 2 1 3.48 1.81 15.00 -68.25 AA 126:191 chr6_cox_hap1_29 Internal 1971388 1971524 2.81 - 1 1 4.94 4.13 7.06 -47.95 AA 80:126 chr6_cox_hap1_29 Internal 1971888 1972053 5.19 - 2 2 3.92 3.49 12.05 -58.10 AA 25: 80 chr6_cox_hap1_29 First 1972464 1972536 11.08 - 0 1 2.87 3.56 12.19 -25.55 AA 1: 25 chr6_cox_hap1_29 >chr6_cox_hap1_29|SGP_v1.0_predicted_cDNA_29|831_NN ATGCCGAGGAAGAAGCCATTCAGCGTGAAGCAGAAGAAGAAGCAGTTGCAGGACAAACGG GAGCGGAAGAGAGGGCTTCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGGAGC CGGGAGCGGCGAGAGGAACAGACCGACACCTCGGACGGGGAGTCTGTGACCCATCATATC CGCAGGCTTAACCAGCAGCCTTCTCAGGGGCTGGGTCCACGAGGCTACGACCCAAATCGA TACCGACTGCATTTTGAGAGAGACAGCAGGGAGGAGGTAGAGAGGAGAAAGAGAGCAGCC CGGGAGCAAGTTCTACAGCCGGTCAGTGCTGAGTTGTTGGAGCTGGACATCCGGGAGGTG TATCAGCCTGGCTCAGTGGACTTGAGCAGCTGGCGGGAGAAGATTGCTCGGGATGTGGCT GGGGCCACCTGGGGTAATGGCTCTGGGGAGGAGGAGGAAGAGGAGGATGGCCCAGCAGTC CTGGTGGAGCAGCAGACTGATTCAGCAATGGAGCCAACTGGCCCAACCCAAGAGCGCTAC AAGGATGGGGTGGTGACCATCGGCTGTGTGGGTTTCCCTAATGTGGGAAAGTCCTCGCTG ATCAATGGGCTGGTGGGGCGGAAAGTCGTTCTGGCGGGGATCTACCCTATCGCCCAGATC CAGGAGCCCTACACTGCTGTGGGCTACCTGGCCTCCCGAATTCCCGTGCAGGCCCTGCTC CACCTGCGCCACCCAGAGGCTGAGGACCCCTCAGCGGAACACCCCTGGTGTGCCTGGGAC ATCTGTGAAGAGATTCTGCCATTGATGAAGCTGCTGTCCACTCACCCCTAG >chr6_cox_hap1_29|SGP_v1.0_predicted_protein_29|277_AA MPRKKPFSVKQKKKQLQDKRERKRGLQDGLRSSSNSRSGSRERREEQTDTSDGESVTHHI RRLNQQPSQGLGPRGYDPNRYRLHFERDSREEVERRKRAAREQVLQPVSAELLELDIREV YQPGSVDLSSWREKIARDVAGATWGNGSGEEEEEEDGPAVLVEQQTDSAMEPTGPTQERY KDGVVTIGCVGFPNVGKSSLINGLVGRKVVLAGIYPIAQIQEPYTAVGYLASRIPVQALL HLRHPEAEDPSAEHPWCAWDICEEILPLMKLLSTHP* # Gene 30 (Forward). 2 exons. 71 aa. Score = 2.82 First 1973678 1973783 3.77 + 0 1 2.72 3.92 8.22 -37.10 AA 1: 36 chr6_cox_hap1_30 Terminal 1978722 1978828 -0.95 + 2 0 3.23 0.00 9.54 -36.40 AA 36: 71 chr6_cox_hap1_30 >chr6_cox_hap1_30|SGP_v1.0_predicted_cDNA_30|213_NN ATGCCGAAACGAAAGAAGCAGAATCATCACCAGCCACCGACACAGCAGCAGCCCCCGCTG CCCGAGCGGGAAGAGACTGGAGATGAGGAGGATGGGAGTCCCATCGACAAATCCGACCGC CCTGTCTGCCGACATTTTGCCAAAAAGGGCCACTGTCGATATGAGGACCTCTGTGCCTTC TACCACCCAGGCGTCAATGGACCTCCTCTGTGA >chr6_cox_hap1_30|SGP_v1.0_predicted_protein_30|71_AA MPKRKKQNHHQPPTQQQPPLPEREETGDEEDGSPIDKSDRPVCRHFAKKGHCRYEDLCAF YHPGVNGPPL* # Gene 31 (Forward). 23 exons. 777 aa. Score = 99.09 First 1987823 1987895 11.53 + 0 1 5.86 3.99 9.09 -25.55 AA 1: 25 chr6_cox_hap1_31 Internal 1993745 1993791 2.39 + 2 0 2.46 3.56 6.12 -16.45 AA 25: 40 chr6_cox_hap1_31 Internal 1994409 1994538 9.30 + 0 1 3.15 2.84 15.23 -45.50 AA 41: 84 chr6_cox_hap1_31 Internal 1994684 1994721 -2.51 + 2 0 3.45 4.33 0.17 -13.30 AA 84: 96 chr6_cox_hap1_31 Internal 1994806 1994913 2.64 + 0 0 4.25 1.31 9.78 -37.80 AA 97:132 chr6_cox_hap1_31 Internal 1996268 1996342 4.73 + 0 0 4.54 3.71 7.10 -26.25 AA 133:157 chr6_cox_hap1_31 Internal 1996742 1996855 5.45 + 0 0 2.81 1.80 13.53 -39.90 AA 158:195 chr6_cox_hap1_31 Internal 1999403 1999525 8.96 + 0 0 3.14 4.19 13.16 -43.05 AA 196:236 chr6_cox_hap1_31 Internal 1999945 2000045 5.14 + 0 2 1.29 3.00 12.66 -35.35 AA 237:270 chr6_cox_hap1_31 Internal 2000142 2000227 -2.91 + 1 1 0.97 2.00 7.52 -30.10 AA 270:299 chr6_cox_hap1_31 Internal 2000529 2000668 3.43 + 2 0 3.71 0.90 12.59 -49.00 AA 299:345 chr6_cox_hap1_31 Internal 2000755 2000903 3.57 + 0 2 6.46 1.39 9.55 -52.15 AA 346:395 chr6_cox_hap1_31 Internal 2001597 2001680 3.89 + 1 2 2.81 -0.13 12.34 -29.40 AA 395:423 chr6_cox_hap1_31 Internal 2001895 2002019 2.11 + 1 1 1.20 2.88 11.85 -43.75 AA 423:465 chr6_cox_hap1_31 Internal 2002216 2002328 11.29 + 2 0 3.11 3.58 15.08 -39.55 AA 465:502 chr6_cox_hap1_31 Internal 2002471 2002642 7.08 + 0 1 6.70 3.49 11.00 -60.20 AA 503:560 chr6_cox_hap1_31 Internal 2002811 2002885 3.66 + 2 1 4.83 0.83 8.80 -26.25 AA 560:585 chr6_cox_hap1_31 Internal 2002978 2003048 -2.84 + 2 0 4.08 3.67 1.56 -24.85 AA 585:608 chr6_cox_hap1_31 Internal 2006018 2006050 2.14 + 0 0 6.11 3.44 1.37 -11.55 AA 609:619 chr6_cox_hap1_31 Internal 2006136 2006304 12.73 + 0 1 3.68 0.03 22.15 -59.15 AA 620:676 chr6_cox_hap1_31 Internal 2006479 2006543 1.04 + 2 0 4.08 3.89 3.86 -22.75 AA 676:697 chr6_cox_hap1_31 Internal 2006636 2006708 1.80 + 0 1 1.07 3.67 8.37 -25.55 AA 698:722 chr6_cox_hap1_31 Terminal 2006865 2007031 4.47 + 2 0 3.06 0.00 16.59 -57.40 AA 722:777 chr6_cox_hap1_31 >chr6_cox_hap1_31|SGP_v1.0_predicted_cDNA_31|2331_NN ATGCCGAAGGCGCCCAAGCAGCAGCCGCCGGAGCCCGAGTGGATCGGGGACGGAGAGAGC ACGAGCCCATCAGACAAAGTGGTGAAGAAAGGGAAGAAGGACAAGAAGATCAAAAAAACG CAGCAAAAAAAAAAGCGAGATACCCGAAAAGGCAGGCGGAAGAAGGATGTGGATGATGAT GGAGAAGAGAAAGAGCTCATGGAGCGTCTTAAGAAGCTCTCAGTGCCAACCAGTGATGAG GAGGATGAAGTACCCGCCCCAAAACCCCGCGGAGGGAAGAAAACCAAGGGTGGTAATGTT TTTGCAGCCCTGATTCAGGATCAGAGTGAGGAAGAGGAGGAGGAAGAAAAACATCCTCCT AAGCCTGCCAAGCCGGAGAAGAATCGGATCAATAAGGCCGTATCTGAGGAACAGCAGCCT GCACTCAAGGGCAAAAAGGGAAAGGAAGAGAAGTCAAAAGGGAAGGCTAAGCCTCAAAAT AAATTCGCTGCTCTGGACAATGAAGAGGAGGATAAAGAAGAAGAAATTATAAAGGAAAAG GAGCCTCCCAAACAAGGGAAGGAGAAGGCCAAGAAGGCAGAGCAGATGGAGTATGAGCGC CAAGTGGCTTCATTAAAAGCAGCCAATGCAGCTGAAAATGACTTCTCCGTGTCCCAGGCG GAGATGTCCTCCCGCCAAGCCATGTTAGAAAATGCATCTGACATCAAGCTGGAGAAGTTC AGCATCTCCGCTCATGGCAAGGAGCTGTTCGTCAATGCAGACCTGTACATTGTAGCCGGC CGCCGCTACGGGCTGGTAGGACCCAATGGCAAGGGCAAGACCACACTCCTCAAGCACATT GCCAACCGAGCCCTGAGCATCCCTCCCAACATTGATGTGTTGCTGTGTGAGCAGGAGGTG GTAGCAGATGAGACACCAGCAGTCCAGGCTGTTCTTCGAGCTGACACCAAGCGATTGAAG CTGCTGGAAGAGGAGCGGCGGCTTCAGGGACAGCTGGAACAAGGGGATGACACAGCTGCT GAGAGGCTAGAGAAGGTGTATGAGGAATTGCGGGCCACTGGGGCGGCAGCTGCAGAGGCC AAAGCACGGCGGATCCTGGCTGGCCTGGGCTTTGACCCTGAAATGCAGAATCGACCCACA CAGAAGTTCTCAGGGGGCTGGCGCATGCGTGTCTCCCTGGCCAGGGCACTGTTCATGGAG CCCACACTGCTGATGCTGGATGAGCCCACCAACCACCTGGACCTCAACGCTGTCATCTGG CTTAATAACTACCTCCAGGGCTGGCGGAAGACCTTGCTGATCGTCTCCCATGACCAGGGC TTCTTGGATGATGTCTGCACTGATATCATCCACCTCGATGCCCAGCGGCTCCACTACTAT AGGGGCAATTACATGACCTTCAAAAAGATGTACCAGCAGAAGCAGAAAGAACTGCTGAAA CAGTATGAGAAGCAAGAGAAAAAGCTGAAGGAGCTGAAGGCAGGCGGGAAGTCCACCAAG CAGGCGGAAAAACAAACGAAGGAAGCCCTGACTCGGAAGCAGCAGAAATGCCGACGGAAA AACCAAGATGAGGAATCCCAGGAGGCCCCTGAGCTCCTGAAGCGCCCTAAGGAGTACACT GTGCGCTTCACTTTTCCAGACCCCCCACCACTCAGCCCTCCAGTGCTGGGTCTGCATGGT GTGACATTCGGCTACCAGGGACAGAAACCACTCTTTAAGAACTTGGATTTTGGCATCGAC ATGGATTCAAGGATTTGCATTGTGGGCCCTAATGGTGTGGGGAAGAGTACGCTACTCCTG CTGCTGACTGGCAAGCTGACACCGACCCATGGGGAAATGAGAAAGAACCACCGGCTGAAA ATTGGCTTCTTCAACCAGCAGTATGCAGAGCAGCTGCGCATGGAGGAGACGCCCACTGAG TACCTGCAGCGGGGCTTCAACCTGCCCTACCAGGATGCCCGCAAGTGCCTGGGCCGCTTC GGCCTGGAGAGTCACGCCCACACCATCCAGATCTGCAAACTCTCTGGTGGTCAGAAGGCG CGAGTTGTGTTTGCTGAGCTGGCCTGTCGGGAACCTGATGTCCTCATCTTGGACGAGCCA ACCAATAACCTGGACATAGAGTCTATTGATGCTCTAGGGGAGGCCATCAATGAATACAAG GGTGCTGTGATCGTTGTCAGCCATGATGCCCGACTCATCACAGAAACCAATTGCCAGCTG TGGGTGGTGGAGGAGCAGAGTGTTAGCCAAATCGATGGTGACTTTGAAGACTACAAGCGG GAGGTGTTGGAGGCCCTGGGTGAAGTCATGGTCAGCCGGCCCCGAGAGTGA >chr6_cox_hap1_31|SGP_v1.0_predicted_protein_31|777_AA MPKAPKQQPPEPEWIGDGESTSPSDKVVKKGKKDKKIKKTQQKKKRDTRKGRRKKDVDDD GEEKELMERLKKLSVPTSDEEDEVPAPKPRGGKKTKGGNVFAALIQDQSEEEEEEEKHPP KPAKPEKNRINKAVSEEQQPALKGKKGKEEKSKGKAKPQNKFAALDNEEEDKEEEIIKEK EPPKQGKEKAKKAEQMEYERQVASLKAANAAENDFSVSQAEMSSRQAMLENASDIKLEKF SISAHGKELFVNADLYIVAGRRYGLVGPNGKGKTTLLKHIANRALSIPPNIDVLLCEQEV VADETPAVQAVLRADTKRLKLLEEERRLQGQLEQGDDTAAERLEKVYEELRATGAAAAEA KARRILAGLGFDPEMQNRPTQKFSGGWRMRVSLARALFMEPTLLMLDEPTNHLDLNAVIW LNNYLQGWRKTLLIVSHDQGFLDDVCTDIIHLDAQRLHYYRGNYMTFKKMYQQKQKELLK QYEKQEKKLKELKAGGKSTKQAEKQTKEALTRKQQKCRRKNQDEESQEAPELLKRPKEYT VRFTFPDPPPLSPPVLGLHGVTFGYQGQKPLFKNLDFGIDMDSRICIVGPNGVGKSTLLL LLTGKLTPTHGEMRKNHRLKIGFFNQQYAEQLRMEETPTEYLQRGFNLPYQDARKCLGRF GLESHAHTIQICKLSGGQKARVVFAELACREPDVLILDEPTNNLDIESIDALGEAINEYK GAVIVVSHDARLITETNCQLWVVEEQSVSQIDGDFEDYKREVLEALGEVMVSRPRE* # Gene 32 (Reverse). 2 exons. 192 aa. Score = 34.12 Terminal 2017886 2017954 -1.55 - 0 0 0.00 -1.81 12.46 -23.10 AA 170:192 chr6_cox_hap1_32 First 2018273 2018779 35.67 - 0 0 3.87 2.41 51.34 -177.45 AA 1:169 chr6_cox_hap1_32 >chr6_cox_hap1_32|SGP_v1.0_predicted_cDNA_32|576_NN ATGGACGAGGGGGCCCTGGTGGGGGCATGGTTGGAGGTGGTGGGCATCGTCCTCACGAAG GCCCTGGTGGGGGCATGGGCAACAGCAGTGGACATCGTCCCCACGAAGGCCCTGGCGGTG GCATGGGAAGTGGGCATCGCCCCCATGAAGGCCCTGGTGGTAGCATGGGTGGGGGTGGAG GACATCGTCCCCACGAAGGCCCTGGCGGTGGCATCAGTGGTGGCAGTGGCCATCGTCCCC ATGAAGGCCCTGGCGGAGGAATGGGTGCCGGTGGTGGACATCGCCCCCACGAAGGCCCTG GCGGAAGCATGGGTGGAAGTGGTGGACATCGTCCCCATGAAGGCCCTGGACACGGGGGGC CCCATGGCCACCGGCCTCATGATGTCCCTGGTCACCGAGGCCATGACCATCGAGGGCCGC CACCTCATGAGCACCGTGGCCATGATGGTCCTGGCCACGGGGGAGGGGGCCACCGAGGGC ACGATGGAGGCCACAGCCATGGAGGAGGGCAACTGCCGCTATGAGAACAACTGTGCCTTC TACCACCCGGGTGTCAATGGGCCCCCCCTGCCCTAG >chr6_cox_hap1_32|SGP_v1.0_predicted_protein_32|192_AA MDEGALVGAWLEVVGIVLTKALVGAWATAVDIVPTKALAVAWEVGIAPMKALVVAWVGVE DIVPTKALAVASVVAVAIVPMKALAEEWVPVVDIAPTKALAEAWVEVVDIVPMKALDTGG PMATGLMMSLVTEAMTIEGRHLMSTVAMMVLATGEGATEGTMEATAMEEGNCRYENNCAF YHPGVNGPPLP* # Gene 33 (Reverse). 9 exons. 295 aa. Score = 24.00 Terminal 2019586 2019622 -4.25 - 1 0 0.00 4.46 2.37 -11.90 AA 283:295 chr6_cox_hap1_33 Internal 2019981 2020003 1.52 - 0 2 1.46 7.10 1.52 -8.05 AA 276:283 chr6_cox_hap1_33 Internal 2020117 2020180 1.31 - 1 0 5.44 2.70 3.82 -22.40 AA 254:275 chr6_cox_hap1_33 Internal 2020345 2020591 1.64 - 2 2 4.07 2.90 14.23 -86.45 AA 172:254 chr6_cox_hap1_33 Internal 2022260 2022372 2.25 - 1 1 1.53 1.45 12.59 -39.55 AA 134:172 chr6_cox_hap1_33 Internal 2022475 2022580 6.04 - 2 2 2.96 5.05 9.45 -37.10 AA 99:134 chr6_cox_hap1_33 Internal 2022805 2022978 12.51 - 2 1 2.70 3.45 19.89 -60.90 AA 41: 99 chr6_cox_hap1_33 Internal 2023116 2023193 2.88 - 2 1 2.65 4.60 6.99 -27.30 AA 15: 41 chr6_cox_hap1_33 First 2026175 2026217 0.11 - 0 1 4.51 2.57 2.74 -15.05 AA 1: 15 chr6_cox_hap1_33 >chr6_cox_hap1_33|SGP_v1.0_predicted_cDNA_33|885_NN ATGGGGAAGTCAAAAGTGTGGATGGGATTTCCAAGATCTTCAGAGCTCCGGAAATTGGCC TCAGTCCTTGTCAGCGACTGGATGGCTGTCATCCGCTCTCAGAGCAGTACCCAGCCTGCT GAGAAAGATAAGAAGAAACGTAAAGATGAAGGAAAAAGTCGAACTACCCTTCCTGAGCGA CCTTTGACAGAGGTGAAGGCTGAGACCCGGGCTGAGGAGGCCCCAGAGAAGAAGAGGGAG AAGCCCAAGTCTCTTCGCACCACAGCACCCAGTCATGCCAAGTTCCGTTCCACTGGACTA GAGCTGGAGACACCATCCTTGGTGCCTGTGAAGAAGAATGCCAGCACAGTGGTGGTTTCT GACAAGTACAACCTTAAACCCATCCCCCTCAAACGTCAGAGCAACGTAGCTGCTCCAGGA GATGCCACTCCCCCTGCAGAGAAGAAATACAAGCCACTCAACACAACACCTAATGCCACC AAAGAGATCAAAGTGAAGATCATCCCGCCACAGCTAAATGTGAATAAGATCAAGGACTTT GGTGAGGCGGCTAAGCGAGAGATACTGTCAGACCGACATGCATTTGAGACAGCGCGGCGT CTGAGCCATGATAACATGGAGGAGAAGGTGCCCTGGGTGTGCCCCCGGCCCCTGGTTCTG CCCTCACCTCTTGTCACCCCTGGAAGCAATAGTCAGGAGCGATATATCCAGGCTGAGCGG GAGAAGGGAATCCTTCAGGAGCTCTTCCTGAACAAGGAGAGTCCTCATGAGCCTGATCCT GAGCCCTACGAGCCCATACCCCCTAAACTCATCCCCCTAGATGAGGAGTGTTCCATGGAT GAGACTCCGGTAGCCCAAACAGTCATCCTTCAGAGGAACTACTGA >chr6_cox_hap1_33|SGP_v1.0_predicted_protein_33|295_AA MGKSKVWMGFPRSSELRKLASVLVSDWMAVIRSQSSTQPAEKDKKKRKDEGKSRTTLPER PLTEVKAETRAEEAPEKKREKPKSLRTTAPSHAKFRSTGLELETPSLVPVKKNASTVVVS DKYNLKPIPLKRQSNVAAPGDATPPAEKKYKPLNTTPNATKEIKVKIIPPQLNVNKIKDF GEAAKREILSDRHAFETARRLSHDNMEEKVPWVCPRPLVLPSPLVTPGSNSQERYIQAER EKGILQELFLNKESPHEPDPEPYEPIPPKLIPLDEECSMDETPVAQTVILQRNY* # Gene 34 (Forward). 1 exons. 36 aa. Score = 2.75 Single 2033579 2033686 2.75 + 0 0 4.05 0.00 11.38 -36.75 AA 1: 36 chr6_cox_hap1_34 >chr6_cox_hap1_34|SGP_v1.0_predicted_cDNA_34|108_NN ATGGCGGCCGCCCGCTCGGGTGGAGTCTTTTATACCCGGACGCCGCCCAACGCGCCCAAA CGTGCTAGTGAAACGCCCTTGTCGCGAGACATTATACGCGAGGCGTGA >chr6_cox_hap1_34|SGP_v1.0_predicted_protein_34|36_AA MAAARSGGVFYTRTPPNAPKRASETPLSRDIIREA* # Gene 35 (Forward). 3 exons. 73 aa. Score = 3.25 First 2034203 2034280 3.45 + 0 0 7.52 1.94 3.87 -27.30 AA 1: 26 chr6_cox_hap1_35 Internal 2036258 2036326 1.44 + 0 0 6.71 2.72 3.10 -24.15 AA 27: 49 chr6_cox_hap1_35 Terminal 2039169 2039240 -1.64 + 0 0 5.12 0.00 5.61 -24.15 AA 50: 73 chr6_cox_hap1_35 >chr6_cox_hap1_35|SGP_v1.0_predicted_cDNA_35|219_NN ATGGCGGCGTCTGTATTAAACACCGTGCTGAGGCGGCTTCCTATGCTATCTCTCTTCCGA GGTTCTCACAGAGTTCAGCGTCGGAATAAAGTTGTTGGGAATCCCTGCCCCATCTGTCGA GATCACAAGTTGCATGTTGACTTTAGGAACGTGAAGCTCTTGGAGCAATTTGTCTGCGCC CACACGGGTATCATCTTCTATGCTCCATACACAGGTTAG >chr6_cox_hap1_35|SGP_v1.0_predicted_protein_35|73_AA MAASVLNTVLRRLPMLSLFRGSHRVQRRNKVVGNPCPICRDHKLHVDFRNVKLLEQFVCA HTGIIFYAPYTG* # Gene 36 (Forward). 7 exons. 226 aa. Score = 17.43 First 2043223 2043329 5.79 + 0 2 2.54 0.43 14.15 -37.45 AA 1: 36 chr6_cox_hap1_36 Internal 2044188 2044248 4.96 + 1 0 5.13 3.28 6.03 -21.35 AA 36: 56 chr6_cox_hap1_36 Internal 2044369 2044482 2.28 + 0 0 5.80 0.97 8.47 -39.90 AA 57: 94 chr6_cox_hap1_36 Internal 2044666 2044767 2.66 + 0 0 4.84 0.95 9.24 -35.70 AA 95:128 chr6_cox_hap1_36 Internal 2056712 2056757 4.92 + 0 1 6.85 2.22 4.55 -16.10 AA 129:144 chr6_cox_hap1_36 Internal 2062402 2062444 -3.94 + 2 2 2.66 3.08 1.62 -15.05 AA 144:158 chr6_cox_hap1_36 Terminal 2067601 2067805 0.76 + 1 0 5.22 0.00 13.71 -70.70 AA 158:226 chr6_cox_hap1_36 >chr6_cox_hap1_36|SGP_v1.0_predicted_cDNA_36|678_NN ATGGAGTTCCCGTTCGATGTGGACGCGCTGTTCCCGGAGCGGATCACGGTGCTGGACCAG CACCTGAGGCCCCCAGCCCGCCGACCCGGAACCACAACGCCGGCCCGGGCTGGAAAAGGA GCCATTATTGGTTTCATCAAAGTTGGATACAAGAAGCTCTTTGTACTGGATGATCGTGAG GCTCATAATGAGGTAGAACCACTTTGCATCCTGGACTTTTACATCCATGAGTCTGTGCAA CGCCATGGCCATGGGCGAGAACTCTTCCAGTATATGTTGCAGAAGGAGCGAGTGGAACCG CACCAACTGGCAATTGACCGACCCTCACAGAAGCTGCTGAAATTCCTGAATAAGCACTAC AATCTGGAGACCACAGTCCCACAGGTGAACAACTTTGTGATCTTTGAAGGCTTCTTTGCC CATCAACATCGCAACCAAGACTCCAAGCAGGGAGAACAGGAAACAAAGAATAGGGGCCGG ACATGGTACATTCTTTCACTGACCCTCTGCCGTTTCCTGGCCTGGAATTATTTTGCACAC CTTCGTTTGGAGGTTTTACAGCTGACCCGCCACCCTGAGAACTGGACCCTGCAAGCCCGG TGGCGGCTTGTGGGGCTGCCCGTCCACTTGCTCTTTTTGCGGTTCTACAAGCGTGACAAA GACGAGCATTACCGGTAA >chr6_cox_hap1_36|SGP_v1.0_predicted_protein_36|226_AA MEFPFDVDALFPERITVLDQHLRPPARRPGTTTPARAGKGAIIGFIKVGYKKLFVLDDRE AHNEVEPLCILDFYIHESVQRHGHGRELFQYMLQKERVEPHQLAIDRPSQKLLKFLNKHY NLETTVPQVNNFVIFEGFFAHQHRNQDSKQGEQETKNRGRTWYILSLTLCRFLAWNYFAH LRLEVLQLTRHPENWTLQARWRLVGLPVHLLFLRFYKRDKDEHYR* # Gene 37 (Reverse). 17 exons. 912 aa. Score = 129.41 Terminal 2069569 2069697 -0.82 - 0 0 0.00 5.89 8.12 -44.10 AA 870:912 chr6_cox_hap1_37 Internal 2071064 2071237 9.32 - 0 0 3.65 4.10 15.43 -60.90 AA 812:869 chr6_cox_hap1_37 Internal 2071793 2071955 1.41 - 1 0 -0.64 5.22 12.62 -57.05 AA 757:811 chr6_cox_hap1_37 Internal 2072556 2072623 1.53 - 0 2 2.10 4.66 5.71 -23.80 AA 735:757 chr6_cox_hap1_37 Internal 2072749 2072867 4.20 - 2 0 4.18 3.18 9.46 -41.65 AA 695:734 chr6_cox_hap1_37 Internal 2072955 2073117 -1.19 - 0 1 1.30 5.17 8.64 -57.05 AA 641:695 chr6_cox_hap1_37 Internal 2075829 2075981 6.62 - 0 0 2.13 3.30 15.01 -53.55 AA 590:640 chr6_cox_hap1_37 Internal 2076389 2076599 7.71 - 1 0 0.02 4.46 19.67 -73.85 AA 519:589 chr6_cox_hap1_37 Internal 2078984 2079099 -1.14 - 0 2 0.94 1.88 10.44 -40.60 AA 481:519 chr6_cox_hap1_37 Internal 2079268 2079378 6.74 - 0 0 3.78 5.95 8.32 -38.85 AA 444:480 chr6_cox_hap1_37 Internal 2081158 2081349 7.78 - 0 0 2.02 5.43 15.15 -67.20 AA 380:443 chr6_cox_hap1_37 Internal 2081428 2081631 10.57 - 0 0 4.60 3.55 17.36 -71.40 AA 312:379 chr6_cox_hap1_37 Internal 2081836 2082090 32.15 - 0 0 3.44 3.85 36.53 -89.25 AA 227:311 chr6_cox_hap1_37 Internal 2086767 2086823 12.79 - 0 0 3.06 6.34 10.47 -19.95 AA 208:226 chr6_cox_hap1_37 Internal 2087147 2087309 9.24 - 1 0 2.33 -0.07 20.90 -57.05 AA 153:207 chr6_cox_hap1_37 Internal 2087393 2087631 9.75 - 0 2 3.57 4.30 18.76 -83.65 AA 74:153 chr6_cox_hap1_37 First 2088980 2089198 12.74 - 0 0 -0.46 7.56 20.10 -76.65 AA 1: 73 chr6_cox_hap1_37 >chr6_cox_hap1_37|SGP_v1.0_predicted_cDNA_37|2736_NN ATGGCGACGCCGGCGGGTCTGGAGCGCTGGGTTCAGGACGAGCTGCACTCGGTGTTGGGG CTGAGCGAGCGGCACGTCGCCCAGTTTCTGATCGGTACCGCACAGCGCTGCACCTCTGCC GAGGAGTTCGTGCAGCGCCTACGAGACACTGATACCTTGGATCTCAGTGGGCCGGCCCGG GACTTCGCCCTGAGACTCTGGAACAAGGTGTCGGCAGGGGTACCACGAAAGGCAGTGGTA GAAAAGCCAGCTCGGGCAGCAGAGCGAGAGGCCCGGGCCCTGCTGGAGAAGAACCGATCT TATAGGTTACTGGAAGACAGTGAAGAGAGCAGTGAGGAGACTGTGAGTAGGGCTGGAAGC AGCCTCCAGAAGAAACGTAAAAAGCGGAAACACCTCAGGAAGAAGCGTGAGGAAGAAGAG GAGGAAGAGGCTTCTGAGAAAGGGAAGAAGAAAACAGGGGGGAGTAAACAGCAGACAGAG AAGCCAGAGTCGGAAGATGAGTGGGAACGGACAGAGCGTGAACGCCTTCAGGACCTGGAG GAGCGTGATGCCTTTGCTGAGCGGGTTCGACAGCGGGACAAGGATCGGACTCGAAATGTC CTGGAACGGTCAGACAAGAAGGCTTATGAAGAGGCTCAGAAGCGCCTCAAGATGGCCGAG GAAGACCGGAAGGCCATGGTCCCTGAGCTGCGGAAGAAATCTCGCCGAGAGTACCTGGCT AAGCGGGAGCGAGAGAAGCTTGAGGACCTGGAGGCGGAGCTGGCTGATGAGGAGTTCCTT TTTGGGGACGTGGAGCTGAGCCGGCACGAGCGGCAGGAGCTCAAATATAAGCGGCGAGTG CGGGATCTCGCCCGGGAGTACCGGGCAGCTGGGGAGCAGGAGAAGCTGGAGGCCACCAAT CGCTACCACATGCCCAAGGAAACCCGAGGACAGCCAGCCCGAGCTGTGGATCTAGTGGAG GAGGAATCAGGAGCCCCTGGGGAGGAGCAGCGGCGCTGGGAGGAGGCGCGGCTTGGGGCA GCGTCCCTGAAGTTTGGGGCCCGAGATGCTGCCTCTCAGGAGCCCAAGTATCAACTGGTG CTGGAGGAGGAGGAGACCATTGAGTTTGTCCGGGCCACTCAGCTCCAGGGTGATGAGGAG CCGTCAGCTCCACCCACTTCAACTCAGGCCCAGCAGAAAGAGTCCATCCAGGCCGTCCGC CGCAGCCTCCCGGTGTTCCCATTTCGAGAGGAGCTCCTGGCTGCTATTGCAAATCACCAA GTCCTCATCATTGAAGGCGAGACAGGCTCAGGGAAGACCACCCAGATCCCGCAGTATCTC TTTGAGGAGGGTTATACAAACAAGGGTATGAAGATTGCCTGCACCCAACCCCGGAGAGTG GCTGCCATGAGTGTGGCCGCCCGAGTGGCCCGGGAGATGGGTGTGAAGCTTGGGAATGAG GTTGGCTACAGCATCCGCTTTGAGGACTGCACATCAGAGCGAACTGTCCTCCGCTACATG ACAGATGGGATGCTTCTCCGGGAGTTCCTCTCTGAGCCTGACCTGGCGAGTTACAGCGTG GTGATGGTGGATGAGGCACACGAAAGGACCCTACACACAGACATTCTCTTTGGATTGATC AAGGATGTTGCTCGCTTCCGACCTGAGCTCAAGGTCCTGGTGGCTTCAGCCACAATGGAC ACTGCCCGTTTTTCCACCTTCTTTGATGACGCCCCTGTGTTTCGAATCCCCGGACGCAGG TTTCCTGTGGACATCTTCTACACCAAGGAGGAGATTGAGGCTGCCTGTGAGATGCTCCAG GATCGCTGCCGCCGCCTGGGCTCCAAAATCCGGGAGCTCCTGGTGCTGCCCATTTATGCC AATCTGCCCTCTGACATGCAGGCCCGTATCTTCCAGCCCACACCACCTGGGGCACGAAAG GCCTCAGCCAATCAGCGAGCTGGCAGGGCAGGTCGGGTGGCTGCAGGGAAGTGCTTCCGC CTGTATACCGCCTGGGCCTATCAGCACGAGCTTGAGGAAACCACAGTGCCTGAGATCCAG AGGACCAGCTTGGGCAATGTCGTGTTGCTGCTCAAGAGCTTAGGGATCCATGACCTAATG CACTTTGATTTCCTGGACCCTCCACCATATGAGACACTGCTGCTGGCTTTGGAGCAGCTG TATGCTCTGGGAGCCCTCAACCACCTTGGGGAGCTCACCACGTCTGGTCGAAAGATGGCA GAGCTGCCGGTGGACCCCATGCTGTCCAAAATGATCTTAGCCTCTGAGAAGTACAGCTGT TCAGAGGAGATCCTGACAGTGGCTGCCATGCTCTCTGTCAACAACTCCATCTTCTACCGA CCAAAGGACAAGGTCGTCCATGCTGACAATGCCCGTGTCAACTTCTTTCTCCCTGGCGGT GACCACCTGGTTCTGCTAAATGTTTACACACAGGCCATCACTGCTGGTTACTTTTACCAC ACGGCACGGTTGACTCGGAGTGGCTACCGCACAGTGAAACAGCAGCAGACAGTCTTCATT CATCCCAACTCCTCCCTCTTTGAGCAACAGCCACGCTGGCTGCTCTACCACGAACTTGTC TTGACCACCAAAGAGTTCATGAGACAGGTACTGGAGATTGAGAGCAGTTGGCTTCTGGAG GTGGCTCCCCATTATTATAAGGCCAAGGAGCTAGAAGATCCCCATGCTAAGAAAATGCCC AAAAAAATAGGCAAAACACGAGAAGAGCTAGGGTAA >chr6_cox_hap1_37|SGP_v1.0_predicted_protein_37|912_AA MATPAGLERWVQDELHSVLGLSERHVAQFLIGTAQRCTSAEEFVQRLRDTDTLDLSGPAR DFALRLWNKVSAGVPRKAVVEKPARAAEREARALLEKNRSYRLLEDSEESSEETVSRAGS SLQKKRKKRKHLRKKREEEEEEEASEKGKKKTGGSKQQTEKPESEDEWERTERERLQDLE ERDAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLA KREREKLEDLEAELADEEFLFGDVELSRHERQELKYKRRVRDLAREYRAAGEQEKLEATN RYHMPKETRGQPARAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPKYQLV LEEEETIEFVRATQLQGDEEPSAPPTSTQAQQKESIQAVRRSLPVFPFREELLAAIANHQ VLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNE VGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLI KDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKEEIEAACEMLQ DRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKASANQRAGRAGRVAAGKCFR LYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQL YALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYR PKDKVVHADNARVNFFLPGGDHLVLLNVYTQAITAGYFYHTARLTRSGYRTVKQQQTVFI HPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMP KKIGKTREELG* # Gene 38 (Reverse). 8 exons. 353 aa. Score = 30.56 Terminal 2093626 2093645 -1.92 - 2 0 0.00 5.59 2.00 -5.95 AA 347:353 chr6_cox_hap1_38 Internal 2095536 2095746 24.02 - 0 1 4.32 5.63 25.16 -73.85 AA 277:347 chr6_cox_hap1_38 Internal 2105633 2105678 5.13 - 1 0 3.99 2.84 6.82 -16.10 AA 261:276 chr6_cox_hap1_38 Internal 2107605 2107638 -3.59 - 2 2 2.26 3.22 1.73 -11.90 AA 250:261 chr6_cox_hap1_38 Internal 2128020 2128079 1.13 - 2 1 3.69 2.92 5.19 -21.00 AA 230:250 chr6_cox_hap1_38 Internal 2129226 2129707 4.06 - 1 1 1.43 5.08 27.91 -168.70 AA 69:230 chr6_cox_hap1_38 Internal 2130001 2130070 -3.19 - 2 2 5.16 5.03 -1.44 -24.50 AA 46: 69 chr6_cox_hap1_38 First 2131393 2131528 4.91 - 0 1 1.41 2.96 13.74 -47.60 AA 1: 46 chr6_cox_hap1_38 >chr6_cox_hap1_38|SGP_v1.0_predicted_cDNA_38|1059_NN ATGGAGGACACCCAGGCTATTGACTGGGATGTTGAAGAAGAGGAGGAGACAGAGCAATCC AGTGAATCCTTGAGGTGTAACGTGGAGCCAGTAGGGCGGCTACATATCTTTAGTGGTGCC CATGGACCAGAAAAAGATTTTCTTTCTGAAAGGCGTATGGTAAAAAAATCAAGGACCACA TCTTCCTCTGTGATAGTTCCAGAGAGTGATGAAGAGGGGCATTCCCCGGTCCTGGGCGGC CTTGGGCCGCCTTTTGCCTTCAATTTGAACAGTGACACAGATGTGGAAGAAGGTCAGCAA CCAGCCACAGAGGAGGCCTCCTCAGCTGCCAGAAGAGGTGCCACTGTAGAGGCAAAGCAG TCTGAAGCTGAAGTTGTAACTGAAATCCAGCTTGAAAAGGATCAGCCTTTAGTGAAGGAG AGGGACAATGATACAAAAGTCAAGAGGGGTGCAGGGAATGGGGTGGTTCCAGCTGGGGTG ATTCTGGAGAGGAGCCAACCTCCTGGAGAGGACAGTGACACAGATGTGGATGATGACAGC AGGCCTCCTGGAAGGCCAGCTGAGGTCCATTTGGAAAGGGCTCAGCCTTTTGGCTTCATC GACAGCGACACTGATGCGGAAGAAGAGAGGATCCCAGCAACCCCAGTTGTCATTCCTATG AAGAAGAGGAAGATCTTCCATGGAGTAGATTCTGAAGATCTGGACCTACAAGCTACCCAG TGCTTTCTGGAGAATCAGGGCCTGGAAGATGGGAAAACTAGACGAGCTGAGATTCAACCC ACCATCCTTCTCGTCTTTGACTATGCTGAGCTCATGGGCCTCAAACAGCTTAAGATCTCC TTCAGCGAGACAGCCCTGGAGACCACGTACCAATACCCCTCCGAGAGTTCGGTACTGGAG GAGCTGGGCCCGGAGCCTGAGGTCCCCAGTGCCCCCAACCCTCCAGCAGCCCAACCCGAC GACGAAGAGGATGAGGAAGAGCTGCTGCTGCTGCAGCCAGAGCTCCAGGGCGGGCTGCGC ACCAAGGCCCTGATTGTGGATGAGTCCTGCCGGCGGTGA >chr6_cox_hap1_38|SGP_v1.0_predicted_protein_38|353_AA MEDTQAIDWDVEEEEETEQSSESLRCNVEPVGRLHIFSGAHGPEKDFLSERRMVKKSRTT SSSVIVPESDEEGHSPVLGGLGPPFAFNLNSDTDVEEGQQPATEEASSAARRGATVEAKQ SEAEVVTEIQLEKDQPLVKERDNDTKVKRGAGNGVVPAGVILERSQPPGEDSDTDVDDDS RPPGRPAEVHLERAQPFGFIDSDTDAEEERIPATPVVIPMKKRKIFHGVDSEDLDLQATQ CFLENQGLEDGKTRRAEIQPTILLVFDYAELMGLKQLKISFSETALETTYQYPSESSVLE ELGPEPEVPSAPNPPAAQPDDEEDEEELLLLQPELQGGLRTKALIVDESCRR* # Gene 39 (Forward). 4 exons. 445 aa. Score = 83.21 First 2136859 2136915 1.50 + 0 0 1.11 4.64 5.52 -19.95 AA 1: 19 chr6_cox_hap1_39 Internal 2138889 2138997 14.10 + 0 1 2.06 4.38 17.23 -38.15 AA 20: 56 chr6_cox_hap1_39 Internal 2139270 2139380 1.73 + 2 1 3.91 3.33 7.40 -38.85 AA 56: 93 chr6_cox_hap1_39 Terminal 2139692 2140749 65.88 + 2 0 2.63 0.00 105.11 -369.25 AA 93:445 chr6_cox_hap1_39 >chr6_cox_hap1_39|SGP_v1.0_predicted_cDNA_39|1335_NN ATGAGGGAAATCGTGCACATCCAGGCTGGTCAGTGTGGCAACCAGATCGGTGCCAAGTTC TGGGAGGTGATCAGTGATGAACATGGCATCGACCCCACCGGCACCTACCACGGGGACAGC GACCTGCAGCTGGACCGCATCTCTGTGTACTACAATGAAGCCACAGGTGGCAAATATGTT CCTCGTGCCATCCTGGTGGATCTAGAACCTGGGACCATGGACTCTGTTCGCTCAGGTCCT TTTGGCCAGATCTTTAGACCAGACAACTTTGTATTTGGTCAGTCTGGGGCAGGTAACAAC TGGGCCAAAGGCCACTACACAGAGGGCGCCGAGCTGGTTGATTCTGTCCTGGATGTGGTA CGGAAGGAGGCAGAGAGCTGTGACTGCCTGCAGGGCTTCCAGCTGACCCACTCACTGGGC GGGGGCACAGGCTCTGGAATGGGCACTCTCCTTATCAGCAAGATCCGAGAAGAATACCCT GATCGCATCATGAATACCTTCAGTGTGGTGCCTTCACCCAAAGTGTCTGACACCGTGGTC GAGCCCTACAATGCCACCCTCTCCGTCCATCAGTTGGTAGAGAATACTGATGAGACCTAT TGCATTGACAACGAGGCCCTCTATGATATCTGCTTCCGCACTCTGAAGCTGACCACACCA ACCTACGGGGATCTGAACCACCTTGTCTCAGCCACCATGAGTGGTGTCACCACCTGCCTC CGTTTCCCTGGCCAGCTCAATGCTGACCTCCGCAAGTTGGCAGTCAACATGGTCCCCTTC CCACGTCTCCATTTCTTTATGCCTGGCTTTGCCCCTCTCACCAGCCGTGGAAGCCAGCAG TATCGAGCTCTCACAGTGCCGGAACTCACCCAGCAGGTCTTCGATGCCAAGAACATGATG GCTGCCTGTGACCCCCGCCACGGCCGATACCTCACCGTGGCTGCTGTCTTCCGTGGTCGG ATGTCCATGAAGGAGGTCGATGAGCAGATGCTTAACGTGCAGAACAAGAACAGCAGCTAC TTTGTGGAATGGATCCCCAACAATGTCAAGACAGCCGTCTGTGACATCCCACCTCGTGGC CTCAAGATGGCAGTCACCTTCATTGGCAATAGCACAGCCATCCAGGAGCTCTTCAAGCGC ATCTCGGAGCAGTTCACTGCCATGTTCCGCCGGAAGGCCTTCCTCCACTGGTACACAGGC GAGGGCATGGACGAGATGGAGTTCACCGAGGCTGAGAGCAACATGAACGACCTCGTCTCT GAGTATCAGCAGTACCAGGATGCCACCGCAGAAGAGGAGGAGGATTTCGGTGAGGAGGCC GAAGAGGAGGCCTAA >chr6_cox_hap1_39|SGP_v1.0_predicted_protein_39|445_AA MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS EYQQYQDATAEEEEDFGEEAEEEA* # Gene 40 (Reverse). 8 exons. 293 aa. Score = 43.72 Terminal 2147266 2147451 18.82 - 0 0 0.00 3.43 27.57 -64.05 AA 232:293 chr6_cox_hap1_40 Internal 2156511 2156663 13.17 - 0 0 1.37 1.82 22.26 -53.55 AA 181:231 chr6_cox_hap1_40 Internal 2156849 2156944 3.84 - 0 0 2.37 5.57 7.43 -33.60 AA 149:180 chr6_cox_hap1_40 Internal 2157032 2157151 4.27 - 0 0 2.37 2.79 11.99 -42.00 AA 109:148 chr6_cox_hap1_40 Internal 2157543 2157686 2.11 - 0 0 0.44 2.97 13.52 -50.40 AA 61:108 chr6_cox_hap1_40 Internal 2157967 2158057 5.25 - 1 0 2.25 7.22 6.17 -31.85 AA 30: 60 chr6_cox_hap1_40 Internal 2158145 2158220 -5.72 - 2 2 3.21 2.69 1.39 -26.60 AA 5: 30 chr6_cox_hap1_40 First 2158500 2158512 1.99 - 0 1 5.03 1.94 2.04 -4.55 AA 1: 5 chr6_cox_hap1_40 >chr6_cox_hap1_40|SGP_v1.0_predicted_cDNA_40|879_NN ATGGTGGTCTCCGGGTTCTGCCGAAGCCCCCCAGTCATGGTGGCTGGAGGGCGTGTCTTT GTCCTGCCCTGCATCCAACAGATCCAGAGGATCTCTCTCAACACACTGACCCTCAATGTC AAGAGTGAAAAGGTTTACACTCGCCATGGGGTCCCCATCTCAGTCACTGGCATTGCCCAG GTAAAAATCCAGGGGCAGAACAAGGAGATGTTGGCGGCCGCCTGTCAGATGTTCCTGGGG AAGACGGAGGCTGAGATTGCCCACATTGCCCTGGAGACGTTAGAGGGCCACCAGAGGGCC ATCATGGCCCACATGACTGTGGAGGAGATCTATAAGGACAGGCAGAAATTCTCAGAACAG GTTTTCAAAGTGGCCTCCTCAGACCTGGTCAACATGGGCATCAGTGTGGTTAGCTACACT CTGAAGGACATTCACGATGACCAGGACTATTTGCACTCTTTGGGGAAGGCTCGAACAGCT CAAGTCCAAAAAGATGCACGGATTGGAGAAGCAGAGGCCAAGAGAGATGCTGGGATCCGG GAAGCTAAAGCCAAGCAGGAAAAGGTGTCTGCTCAGTACCTGAGTGAGATCGAGATGGCC AAGGCACAGAGAGATTACGAACTGAAGAAGGCCGCCTATGACATCGAGGTCAACACCCGC CGAGCACAGGCTGACCTGGCCTATCAGCTTCAGGTGGCCAAGACTAAGCAGCAGATTGAG GAGCAGCGGGTGCAGGTGCAGGTGGTGGAGCGGGCCCAGCAGGTGGCAGTGCAGGAGCAG GAGATCGCCCGGCGGGAGAAGGAGCTGGAGGCCCGGGTGCGGAAGCCAGCGGAAGCGGAG CGCTACAAGCTGGAGCGCCTAGCCGAGGCAGAGAAGTAA >chr6_cox_hap1_40|SGP_v1.0_predicted_protein_40|293_AA MVVSGFCRSPPVMVAGGRVFVLPCIQQIQRISLNTLTLNVKSEKVYTRHGVPISVTGIAQ VKIQGQNKEMLAAACQMFLGKTEAEIAHIALETLEGHQRAIMAHMTVEEIYKDRQKFSEQ VFKVASSDLVNMGISVVSYTLKDIHDDQDYLHSLGKARTAQVQKDARIGEAEAKRDAGIR EAKAKQEKVSAQYLSEIEMAKAQRDYELKKAAYDIEVNTRRAQADLAYQLQVAKTKQQIE EQRVQVQVVERAQQVAVQEQEIARREKELEARVRKPAEAERYKLERLAEAEK* # Gene 41 (Reverse). 2 exons. 147 aa. Score = 7.79 Terminal 2160289 2160549 8.28 - 0 0 0.00 6.99 19.22 -90.30 AA 61:147 chr6_cox_hap1_41 First 2160662 2160841 -0.50 - 0 0 3.61 2.62 9.15 -63.00 AA 1: 60 chr6_cox_hap1_41 >chr6_cox_hap1_41|SGP_v1.0_predicted_cDNA_41|441_NN ATGACCATCCTGCAGGCCCCGACCCCGGCCCCCTCCACCATCCCGGGACCCCGGCGGGGC TCCGGTCCTGAGATCTTCACCTTCGACCCTCTCCCGGAGCCCGCAGCGGCCCCTGCCGGG CGCCCCAGCGCCTCTCGCGGGCACCGAAAGCGCAGCCGCAGGGTTCTCTACCCTCGAGTG GTCCGGCGCCAGCTGCCAGTCGAGGAACCGAACCCAGCCAAAAGGCTTCTCTTTCTGCTG CTCACCATCGTCTTCTGCCAGATCCTGATGGCTGAAGAGGGTGTGCCGGCGCCCCTGCCT CCAGAGGACGCCCCTAACGCCGCATCCCTGGCGCCCACCCCTGTGTCCCCCGTCCTCGAG CCCTTTAATCTGACTTCGGAGCCCTCGGACTACGCTCTGGACCTCAGCACTTTCCTCCAG CAACACCCGGCCGCCTTCTAA >chr6_cox_hap1_41|SGP_v1.0_predicted_protein_41|147_AA MTILQAPTPAPSTIPGPRRGSGPEIFTFDPLPEPAAAPAGRPSASRGHRKRSRRVLYPRV VRRQLPVEEPNPAKRLLFLLLTIVFCQILMAEEGVPAPLPPEDAPNAASLAPTPVSPVLE PFNLTSEPSDYALDLSTFLQQHPAAF* # Gene 42 (Forward). 19 exons. 924 aa. Score = 143.23 First 2301086 2301092 -4.14 + 0 1 1.67 3.01 -0.19 -2.45 AA 1: 3 chr6_cox_hap1_42 Internal 2305290 2305392 -0.65 + 2 2 1.46 2.11 8.97 -36.05 AA 3: 37 chr6_cox_hap1_42 Internal 2305584 2305812 9.70 + 1 0 5.08 3.87 16.68 -80.15 AA 37:113 chr6_cox_hap1_42 Internal 2307355 2307502 5.47 + 0 1 4.96 3.02 10.73 -51.80 AA 114:163 chr6_cox_hap1_42 Internal 2307762 2307861 2.31 + 2 2 3.00 3.31 7.95 -35.00 AA 163:196 chr6_cox_hap1_42 Internal 2308386 2308572 13.53 + 1 0 3.92 4.94 17.54 -65.45 AA 196:258 chr6_cox_hap1_42 Internal 2308680 2308926 3.65 + 0 1 6.75 2.63 12.68 -86.45 AA 259:341 chr6_cox_hap1_42 Internal 2309656 2309807 11.65 + 2 0 2.17 1.70 19.99 -53.20 AA 341:391 chr6_cox_hap1_42 Internal 2313070 2313249 6.43 + 0 0 2.62 4.59 13.85 -63.00 AA 392:451 chr6_cox_hap1_42 Internal 2313398 2313525 1.09 + 0 2 2.68 3.65 8.39 -44.80 AA 452:494 chr6_cox_hap1_42 Internal 2313763 2313981 23.02 + 1 2 4.38 2.09 28.66 -76.65 AA 494:567 chr6_cox_hap1_42 Internal 2314457 2314691 26.17 + 1 0 3.78 2.40 32.06 -82.25 AA 567:645 chr6_cox_hap1_42 Internal 2315272 2315421 7.59 + 0 0 3.33 1.37 16.01 -52.50 AA 646:695 chr6_cox_hap1_42 Internal 2315573 2315674 0.46 + 0 0 4.07 0.20 8.95 -35.70 AA 696:729 chr6_cox_hap1_42 Internal 2327790 2327858 1.49 + 0 0 5.63 4.60 1.88 -24.15 AA 730:752 chr6_cox_hap1_42 Internal 2328373 2328505 7.42 + 0 1 4.70 2.70 12.44 -46.55 AA 753:797 chr6_cox_hap1_42 Internal 2328687 2328817 3.14 + 2 0 1.45 0.59 15.15 -45.85 AA 797:840 chr6_cox_hap1_42 Internal 2329668 2329746 2.34 + 0 1 3.02 3.51 6.72 -27.65 AA 841:867 chr6_cox_hap1_42 Terminal 2330170 2330342 22.56 + 2 0 2.80 0.00 30.00 -59.50 AA 867:924 chr6_cox_hap1_42 >chr6_cox_hap1_42|SGP_v1.0_predicted_cDNA_42|2772_NN ATGAGAGCCAAGTGCCGCTATGCCCTGGGCATGCAGGACCGGACCATCCCAGACAGTGAC ATCTCTGCTTCCAGCTCCTGGTCAGATTCCACTGCCGCCCGCCACAGCAGGTTGGAGAGC AGTGACGGGGATGGGGCCTGGTGCCCCGCAGGGTCGGTGTTTCCCAAGGAGGAGGAGTAC TTGCAGGTGGATCTACAACGACTGCACCTGGTGGCTCTGGTGGGCACCCAGGGACGGCAT GCCGGGGGCCTGGGCAAGGAGTTCTCCCGGAGCTACCGGCTGCGTTACTCCCGGGATGGT CGCCGCTGGATGGGCTGGAAGGACCGCTGGGGTCAGGAGGTGATCTCAGGCAATGAGGAC CCTGAGGGAGTGGTGCTGAAGGACCTTGGGCCCCCCATGGTTGCCCGACTGGTTCGCTTC TACCCCCGGGCTGACCGGGTCATGAGCGTCTGTCTGCGGGTAGAGCTCTATGGCTGCCTC TGGAGGGATGGACTCCTGTCTTACACCGCCCCTGTGGGGCAGACAATGTATTTATCTGAG GCCGTGTACCTCAACGACTCCACCTATGACGGACATACCGTGGGCGGACTGCAGTATGGG GGTCTGGGCCAGCTGGCAGATGGTGTGGTGGGGCTGGATGACTTTAGGAAGAGTCAGGAG CTGCGGGTCTGGCCAGGCTATGACTATGTGGGATGGAGCAACCACAGCTTCTCCAGTGGC TATGTGGAGATGGAGTTTGAGTTTGACCGGCTGAGGGCCTTCCAGGCTATGCAGGTCCAC TGTAACAACATGCACACGCTGGGAGCCCGTCTGCCTGGCGGGGTGGAATGTCGCTTCCGG CGTGGCCCTGCCATGGCCTGGGAGGGGGAGCCCATGCGCCACAACCTAGGGGGCAACCTG GGGGACCCCAGAGCCCGGGCTGTCTCAGTGCCCCTTGGCGGCCGTGTGGCTCGCTTTCTG CAGTGCCGCTTCCTCTTTGCGGGGCCCTGGTTACTCTTCAGCGAAATCTCCTTCATCTCT GAGCTGGAGCCCAGAGGCCAGCAGCCCGTGGCCAAGGCCGAGGGGAGCCCGACCGCCATC CTCATCGGCTGCCTGGTGGCCATCATCCTGCTCCTGCTGCTCATCATTGCCCTCATGCTC TGGCGGCTGCACTGGCGCAGGCTCCTCAGCAAGAACAGCGTCCCCCATTATGCCGAGGCT GACATTGTTACCCTGCAGGGCGTCACCGGGGGCAACACCTATGCTGTGCCTGCACTGCCC CCAGGGGCAGTCGGGGATGGGCCCCCCAGAGTGGATTTCCCTCGATCTCGACTCCGCTTC AAGGAGAAGCTTGGCGAGGGCCAGTTTGGGGAGGTGCACCTGTGTGAGGTCGACAGCCCT CAAGATCTGGTCAGTCTTGATTTCCCCCTTAATGTGCGTAAGGGACACCCTTTGCTGGTA GCTGTCAAGATCTTACGGCCAGATGCCACCAAGAATGCCAGGAATGATTTCCTGAAAGAG GTGAAGATCATGTCGAGGCTCAAGGACCCAAACATCATTCGGCTGCTGGGCGTGTGTGTG CAGGACGACCCCCTCTGCATGATTACTGACTACATGGAGAACGGCGACCTCAACCAGTTC CTCAGTGCCCACCAGCTGGAGGACAAGGCAGCCGAGGGGGCCCCTGGGGACGGGCAGGCT GCGCAGGGGCCCACCATCAGCTACCCAATGCTGCTGCATGTGGCAGCCCAGATCGCCTCC GGCATGCGCTATCTGGCCACACTCAACTTTGTACATCGGGACCTGGCCACGCGGAACTGC CTAGTTGGGGAAAATTTCACCATCAAAATCGCAGACTTTGGCATGAGCCGGAACCTCTAT GCTGGGGACTATTACCGTGTGCAGGGCCGGGCAGTGCTGCCCATCCGCTGGATGGCCTGG GAGTGCATCCTCATGGGGAAGTTCACGACTGCGAGTGACGTGTGGGCCTTTGGTGTGACC CTGTGGGAGGTGCTGATGCTCTGTAGGGCCCAGCCCTTTGGGCAGCTCACCGACGAGCAG GTCATCGAGAACGCGGGGGAGTTCTTCCGGGACCAGGGCCGGCAGGGCCTATATGAGCTG ATGCTTCGGTGCTGGAGCCGGGAGTCTGAGCAGCGACCACCCTTTTCCCAGCTGCATCGG TTCCTGGCAGAGGATGCACTCAACACGAGCCGGGGCATGGACCTGGTAGAGATTCTCTCC TTCCTCTTCCAGCTCAGCTTCTCTACTCTGGGCAAGAGGAAATCTCGGCGTTACTACCCC ACACGCCTGGCCATCAATCTCTCATCAGGTGTCTCTGGAGCTGGGGGCACTGTGCATCAG CCAGGTTTCATTGTCGTGGAAACCAATTACCGACTGTATGCCTACACGGAGTCGGAGCTG CAGATTGCCCTCATTGCCCTCTTCTCTGAGATGCTCTATCGGTTCCCCAACATGGTGGTG GCGCAGGTGACCCGGGAGAGTGTGCAGCAGGCAATCGCCAGTGGCATCACAGCCCAGCAG ACACCTGTGCTGCCCCCCACCATCACCGACCAGATCCGGCTCTGGGAGCTGGAAAGGGAC AGACTCCGGTTCACTGAGGGTGTCCTGTATAACCAGTTCCTGTCGCAAGTGGACTTTGAG CTGCTGCTGGCCCACGCGCGGGAGCTGGGCGTGCTCGTGTTCGAGAACTCGGCCAAGCGG CTCATGGTGGTGACCCCGGCCGGGCACAGCGACGTCAAGCGCTTTTGGAAGCGGCAGAAA CATAGCTCCTGA >chr6_cox_hap1_42|SGP_v1.0_predicted_protein_42|924_AA MRAKCRYALGMQDRTIPDSDISASSSWSDSTAARHSRLESSDGDGAWCPAGSVFPKEEEY LQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRLRYSRDGRRWMGWKDRWGQEVISGNED PEGVVLKDLGPPMVARLVRFYPRADRVMSVCLRVELYGCLWRDGLLSYTAPVGQTMYLSE AVYLNDSTYDGHTVGGLQYGGLGQLADGVVGLDDFRKSQELRVWPGYDYVGWSNHSFSSG YVEMEFEFDRLRAFQAMQVHCNNMHTLGARLPGGVECRFRRGPAMAWEGEPMRHNLGGNL GDPRARAVSVPLGGRVARFLQCRFLFAGPWLLFSEISFISELEPRGQQPVAKAEGSPTAI LIGCLVAIILLLLLIIALMLWRLHWRRLLSKNSVPHYAEADIVTLQGVTGGNTYAVPALP PGAVGDGPPRVDFPRSRLRFKEKLGEGQFGEVHLCEVDSPQDLVSLDFPLNVRKGHPLLV AVKILRPDATKNARNDFLKEVKIMSRLKDPNIIRLLGVCVQDDPLCMITDYMENGDLNQF LSAHQLEDKAAEGAPGDGQAAQGPTISYPMLLHVAAQIASGMRYLATLNFVHRDLATRNC LVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECILMGKFTTASDVWAFGVT LWEVLMLCRAQPFGQLTDEQVIENAGEFFRDQGRQGLYELMLRCWSRESEQRPPFSQLHR FLAEDALNTSRGMDLVEILSFLFQLSFSTLGKRKSRRYYPTRLAINLSSGVSGAGGTVHQ PGFIVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGITAQQ TPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFELLLAHARELGVLVFENSAKR LMVVTPAGHSDVKRFWKRQKHSS* # Gene 43 (Forward). 12 exons. 1627 aa. Score = 67.07 First 2331564 2331596 -4.95 + 0 0 -2.27 5.91 1.63 -11.55 AA 1: 11 chr6_cox_hap1_43 Internal 2332105 2332226 3.28 + 0 2 6.81 2.01 7.32 -42.70 AA 12: 52 chr6_cox_hap1_43 Internal 2336879 2336960 7.49 + 1 0 4.28 4.03 8.65 -28.70 AA 52: 79 chr6_cox_hap1_43 Internal 2338327 2338452 0.95 + 0 0 5.93 4.42 3.76 -44.10 AA 80:121 chr6_cox_hap1_43 Internal 2338661 2338765 3.13 + 0 0 5.28 3.65 5.89 -36.75 AA 122:156 chr6_cox_hap1_43 Internal 2338917 2338985 4.54 + 0 0 5.62 4.51 3.86 -24.15 AA 157:179 chr6_cox_hap1_43 Internal 2339109 2339187 -4.99 + 0 1 5.16 2.64 -0.04 -27.65 AA 180:206 chr6_cox_hap1_43 Internal 2339315 2339442 5.06 + 2 0 4.36 4.60 8.39 -44.80 AA 206:248 chr6_cox_hap1_43 Internal 2339564 2339716 3.70 + 0 0 4.27 3.28 10.17 -53.55 AA 249:299 chr6_cox_hap1_43 Internal 2341485 2341596 5.35 + 0 1 1.29 4.21 11.65 -39.20 AA 300:337 chr6_cox_hap1_43 Internal 2364735 2368459 45.95 + 2 0 7.18 0.26 214.80 -1303.75 AA 337:1578 chr6_cox_hap1_43 Terminal 2369159 2369305 -2.44 + 0 0 4.11 0.00 9.43 -50.40 AA 1579:1627 chr6_cox_hap1_43 >chr6_cox_hap1_43|SGP_v1.0_predicted_cDNA_43|4881_NN ATGAAATCCCTACGAAACCCGGTGAAAAGAAAGGCCCGGCTGCCCCAAGCTACAGGGGAG ACCTTTTCCATGTGTATCCCACCTCCCAATGTCACTGGCTCCCTGCACATTGGCCACGCA CTCACGGTGGCCATACAGGATGCCCTCGTGCGCTGCCGTTCTGGGGATGTGATAGAATAC CTGCTGAAGAACCAGTGGTTTGTCCGCTGCCAGGAAATGGGGGCCCGAGCTGCCAAGACC CCAGACCTTGCTCGTTTCTACCCCCTGTCACTTTTGGAAACGGGCAGCGACCTTCTGCTG TTCTGGGTGGGCCGCATGGTCATGTTGGGGACCCAGCTCACAGGGCAGCTGCCCTTCAGC AAGGTGCTTCTTCATCCCATGGTTCGGGACAGGCAGGGCCGGAAGATGAGCAAGTCCCTG GGGAATGTGCTGGACCCAAGAGACATCATCAGTGGGGTGGAGATGCAGGTGCTGCAGGAA AAGCTGAGAAGCGGAAATTTGGACCCTGCAGAGCTGGCCATTGTGGCTGCAGCACAGAAA AAGGACTTTCCTCACGGGATCCCTGAGTGTGGGACAGATGCCCTGAGATTCACACTCTGC TCCCATGGAGTTCAGGCGGGCGACTTGCACCTGTCAGTCTCTGAGGTCCAGAGCTGCCGA CATTTCTGCAACAAGATCTGGAATGCTCTTCGCTTTATCCTCAATGCTTTAGGGGAGAAA TTTGTGCCACAGCCTGCTGAGGAGCTGTCTCCCTCCTCCCCGATGGATGCCTGGATCCTG AGCCGCCTTGCCCTGGCTGCCCAGGAGTGTGAGCGGGGCTTCCTCACCCGAGAGCTCTCG CTCGTCACTCATGCCCTGCACCACTTCTGGCTTCACAACCTCTGTGACGTCTACCTGGAG CACTGGCGCCAGCCAGAGCTGGAGCGGCGCTTCTCCCGGGTCCAAGAGGTCGTGCAGGTG CTAAGGGCTCTCCGAGCCACGTACCAGCTCACCAAAGCCCGGCCCCGAGGTGCTACTACA TTCCAAGAATATCAGAAAACTGGGGAACTCTCAACATCCGATCACATATTTCCCCTCACT CCAGGCCTTGTTTATAGTATCCCTTTTGATCACATTGTTCTGCATTCAGGACAAAGACCT CCAGAGCTCCCTAAATCTACAGAAATCCATGAGCAAAAACGCCACTGCAACACCACACGC CATTCTAAGCCAACTGACAAGCCTACAGGCAACTCCAAAACTATAGACCACAAAAGCTCT ACAGATAATCATGAGGCTCCTCCCACTTCTGAAGAAAACTCCAGCAACCAAGGGAAAGAC CCAATGATCCGGAACCAGCGCTCTGTTGATCCTGCTGACTCCACTACCACACATAAAGAA TCCGCTGGAAAAAAACATATAACGCCAGCACCCAAGAGCAAAATAAACTGTCGTAAGTCC ACAACAGGCAAATCAACGGTAACAAGAAAATCAGATAAAACTGGAAGACCTTTGGAAAAG TCCATGAGTACTTTGGATAAGACAAGTACCAGCTCACATAAGACTACAACTTCCTTCCAC AACTCAGGCAATTCACAGACCAAGCAAAAAAGCACATCTTTTCCAGAAAAAATCACAGCA GCCTCAAAAACAACATACAAGACCACAGGAACCCCAGAAGAGTCAGAAAAAACTGAAGAT TCCAGAACAACAGTTGCCTCAGACAAGCTCCTGACAAAAACTACAAAAAACATACAAGAG ACCATATCAGCCAATGAGCTCACACAATCTCTAGCAGAGCCTACAGAACATGGAGGAAGG ACAGCCAATGAGAACAACACACCATCCCCAGCAGAGCCTACAGAAAATAGAGAAAGGACA GCCAATGAGAACACCACACTATCCCCAGCAGAGCCTACAGAAAATAGAGAAAGGACAGCC AATGAGAACACCGCACCATTCCCAGCAGGGCCTACAGAAAATAGAGAAATGACAGCCAAT GAGAATACCACACTATTCCCAGCAGAGCCTACAGAACATGGAGAAAGGACAGCCAATGAG AACACCACACCATCCCCAGCAGAGCCTACAGAACATGGAGAAAGGACAGCCAATGAGAAC ACTACACCATCCCCAGCAGAGCCTACAGAACATGGAGAAAGGACCCCATTTGCCAATGAC AAAACCACATCATCCTCAGCAGAGTCTACAGAACATGGAGAAAGGACCCCACTGGCCAAC GAGAACACCACACCATCCCCAGCAGAGCCTACAGAAAATAGAGAAAGGACAGCCAATGAG AACACCACACCATCCCCAGCAGGGCCTACAGAAAACAGAGAAACGACAGCCAACGAGAAG ACCACACTATCCCCAGTAGAGCCTACAGAAAATAGAGAAACAACAGCCAATGAGAAGACC ACACCATCCCCAGCAGAGCCTACAGAAAATGGACAAAGGACCCCATTTGCCAATGAGAAA ACCACATCATCCTCAGCAGAGCCTACAGAACACGGAGAAAGGACCCCACTGGCCAATGAG AACACCACACCATCCCCAGCAGAGCCTACAGAAAATAGAGAAAGGACAGCCAATGAGAAG ACCACACCATCCCCAGCAGAGCCTACAGAAAATGGAGACAGGACTCCTTTGGCCAATGAG AAGACCACGCCATCTCTAGCAGAGCCTACAGAAAATGGACAAAGGACCCCATTTGCCAAT GAGAAGACCACATCATCCTCAGCAGAGCCTACAGAACACGAAGAAAGGACTCCACTGGCC AATGAGAACACCACACCATCCCCGGCAGAGCCTACAGAAAATAGAGAAAGGACAGCCAAT GAGAACACCACACCATCCCCAGCAGGGCCTACAGAAAATAGAGAAATGACAGCCAACGAG AAGACCACACTATTCCCAGCAGAGCCTACAGAAAATAGAGAAAGGACAGCCAATGAGAAG ACCACATCATCCCCAGCAGAGCCTACAGAAAATGGACAAAGGACCCCATTTGCCAATGAG AAAACCACATCATCCTCAGCAGAGCCTACAGAACACGGAGAAAGGACCCCACTGGCCAAT GAGAACACCACACTATCCCCAGCAGAGCCTACAGAAAATAGAGAAAGGACAGCCAATGAG AAGACCACACCATTCCCAGCAGAGCCTACAGAAAATAGAGAAAGGACAGCCAATGAGAAC ACCACACCATCCCCAGCACAGCCTACAGAAAATGGAGACAGGACTCCATTGGCCAATGAG AAGACCACACCATCTCTAGCAGAGCCTACAGAAAATGGAAAAAGGACCCCATTTGCCAAT GAGAAGACCACATCATCCTCAGCAGAGCCTACAGAACACGCAGAAAGGACTCCACTGGCC AATGAGAACACCACATCATCCCCAGCAGAGCCTACAGAAAATAGAGAAAGGACAGCCAAT GAGAAGACCACACAATTCCCAGCAGAGCCTACAGAAAATAGAGAAAGCACAGCCAATGAG AAGACCACACCATTCCCAGCAGAGCCTACAGAAAATAGAGAATGGACAGCCAATGAGAAC ACCACACTATCCCCAGCAGAGCCTACAGAACATGAAGAAATGACCCCATTGGCCAATGAG AAGACCACACTATCCCCAGCAGAGCCTACAGAAAATGGAGAAAGGACCCCATTTACCAAT GAGAAGACCACACCATCCTCAGCAGAGCCTACAGAACATGGAGAAAGGACCCCACTGGCC AATGAGATCACCACACCATCCCGAGCAGAGCCTACAGAACATGGAGAAAGGATAGCCAAT GAGAAGGCCACACCATCCCCAGCAAAGCCTACAGAACATGGAGAAACGACAGTCAATGAG GACACCACACCATCCTCAGCAGAGCCTACAGAAAATGGAGAAAGGACCCCACTGGCCAAT GAGAACACCACAACATCCCCAACAGAGTCTACAGAACATGGAGAAAGGACAGCCAATGAG AAGACCACACCATCCCCAGCAGAGCCTACAGAACATGGAGAAAGGACACCATCAGCCAAT GAGAAGACCATACCATCTCCAGCAAAGCCTACAGAACACGAAGAAATGACCCCATCAGCC AATGAGAACACCACACCATCCCCAGTAAAGCCTACAGAACATGGAGAAAAGACTACATTG GCCAATGAGAAGATCACACTATCCCCAGAAGGGCCTACAGAACATGGAGCAAAAACTACG TCGGCCAATGAGAAGATCACACCATCCCTAGCAAAGCCTACAGAACATGGAGAAAGGACC ACATCACCCAATGACAAGATCACCTCATCTGCAGCAGAGTCTACAGAACATAGAGATAGG GCTACATCAGCCAATGTGATCACACCAGCCCCAGCAGAGCCTATAAAACATGCAAAAAGG ACCACATTGGCCCATGAGAAGATGACACAAGTCACAGAAAAGTCCACAGAACACCCAGAA AAGACCACGTCAACCACAGAGAAAACCACAAGAACCCCAGAAAAGCCTACGCTATACTCA GAGAAGACCATATGCACCAAAGGGAAAAACACACCAGTCCCAGAAAAGCCTACAGAAAAC CTGGGGAACACCACACTGACCACTGAGACCATAAAAGCCCCAGTAAAGTCCACAGAAAAC CCAGAAAAAACAGCAGCAGTCACAAAGACTATAAAACCTTCAGTCAAGGTCACAGGAGAC AAATCTCTCACTACTACCTCTTCTCATCTAAATAAAACTGAAGTTACTCATCAGGTCTCC TATATGATGCGGACACGCCGCACACTAACCCAGAACACCCAGTACAATGATGCAGAGGAT GAGGGTGGCCCCAATTCCTACCCGGTCTACCTGATGGAGCAGCAGAATCTTGGCATGGGC CAGATCCCTTCCCCACGGTGA >chr6_cox_hap1_43|SGP_v1.0_predicted_protein_43|1627_AA MKSLRNPVKRKARLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALVRCRSGDVIEY LLKNQWFVRCQEMGARAAKTPDLARFYPLSLLETGSDLLLFWVGRMVMLGTQLTGQLPFS KVLLHPMVRDRQGRKMSKSLGNVLDPRDIISGVEMQVLQEKLRSGNLDPAELAIVAAAQK KDFPHGIPECGTDALRFTLCSHGVQAGDLHLSVSEVQSCRHFCNKIWNALRFILNALGEK FVPQPAEELSPSSPMDAWILSRLALAAQECERGFLTRELSLVTHALHHFWLHNLCDVYLE HWRQPELERRFSRVQEVVQVLRALRATYQLTKARPRGATTFQEYQKTGELSTSDHIFPLT PGLVYSIPFDHIVLHSGQRPPELPKSTEIHEQKRHCNTTRHSKPTDKPTGNSKTIDHKSS TDNHEAPPTSEENSSNQGKDPMIRNQRSVDPADSTTTHKESAGKKHITPAPKSKINCRKS TTGKSTVTRKSDKTGRPLEKSMSTLDKTSTSSHKTTTSFHNSGNSQTKQKSTSFPEKITA ASKTTYKTTGTPEESEKTEDSRTTVASDKLLTKTTKNIQETISANELTQSLAEPTEHGGR TANENNTPSPAEPTENRERTANENTTLSPAEPTENRERTANENTAPFPAGPTENREMTAN ENTTLFPAEPTEHGERTANENTTPSPAEPTEHGERTANENTTPSPAEPTEHGERTPFAND KTTSSSAESTEHGERTPLANENTTPSPAEPTENRERTANENTTPSPAGPTENRETTANEK TTLSPVEPTENRETTANEKTTPSPAEPTENGQRTPFANEKTTSSSAEPTEHGERTPLANE NTTPSPAEPTENRERTANEKTTPSPAEPTENGDRTPLANEKTTPSLAEPTENGQRTPFAN EKTTSSSAEPTEHEERTPLANENTTPSPAEPTENRERTANENTTPSPAGPTENREMTANE KTTLFPAEPTENRERTANEKTTSSPAEPTENGQRTPFANEKTTSSSAEPTEHGERTPLAN ENTTLSPAEPTENRERTANEKTTPFPAEPTENRERTANENTTPSPAQPTENGDRTPLANE KTTPSLAEPTENGKRTPFANEKTTSSSAEPTEHAERTPLANENTTSSPAEPTENRERTAN EKTTQFPAEPTENRESTANEKTTPFPAEPTENREWTANENTTLSPAEPTEHEEMTPLANE KTTLSPAEPTENGERTPFTNEKTTPSSAEPTEHGERTPLANEITTPSRAEPTEHGERIAN EKATPSPAKPTEHGETTVNEDTTPSSAEPTENGERTPLANENTTTSPTESTEHGERTANE KTTPSPAEPTEHGERTPSANEKTIPSPAKPTEHEEMTPSANENTTPSPVKPTEHGEKTTL ANEKITLSPEGPTEHGAKTTSANEKITPSLAKPTEHGERTTSPNDKITSSAAESTEHRDR ATSANVITPAPAEPIKHAKRTTLAHEKMTQVTEKSTEHPEKTTSTTEKTTRTPEKPTLYS EKTICTKGKNTPVPEKPTENLGNTTLTTETIKAPVKSTENPEKTAAVTKTIKPSVKVTGD KSLTTTSSHLNKTEVTHQVSYMMRTRRTLTQNTQYNDAEDEGGPNSYPVYLMEQQNLGMG QIPSPR* # Gene 44 (Reverse). 2 exons. 458 aa. Score = 2.72 Terminal 2399177 2399188 -1.91 - 0 0 0.00 6.32 0.82 -3.15 AA 455:458 chr6_cox_hap1_44 First 2402456 2403817 4.63 - 0 0 0.31 -0.35 77.54 -476.70 AA 1:454 chr6_cox_hap1_44 >chr6_cox_hap1_44|SGP_v1.0_predicted_cDNA_44|1374_NN ATGAGGAAGATTTCCCACGGCACCAGGGACCCACCAGGCTTCGCCTCACTCACTGCAGTA GATGCACTATGGGAAGTTGTGTGCATTCCAGTCAGAGCTGCTGTTCCAGAGCCTGCAGAG GTCACACTGGACCCAGAGTTGGTGGCTGTGTTGGCCCCACTGGAGGTTGTGCTGGACTCA GAATTGGTGGCAGTGCTGGCCCCACTGGACACTGTGCTGGACTCAGAGTTGGTGGCTGTG CTGGCCCCACTGGAGGTCGTGCTGGACTCAGAGGTGGTGGCTGTGCTGGCCCCACTGGAC ACTGTGCTGGACTCAGAGTTGGTGGCTGTGCTGGTCCCACTGGAGGTCGTGCTGGACCCA GAGTTGGTGGCTGTGCTGGCCCCACTGGAGGTTGTGCTGGACTCAGAGTTGGTGGCTGTG CTGGCCCCACTGGAGGTCGTGCTGGACTCAGAGTTGGTGGCTGTGCTGGCCCCACTGGAG GTTGTGCTGGAGTCAGAGTTGGTGGCTGTGTTGGCCCCACTGGAGGTTGTACTGGACTCA GAGTTGGTGGCTGTGTTGGCCCCACTGGAGGGTGTGCTGGACTCAGAATTGGTGACTGTG CTGATCCCACTGGACACTGTGCTGGACTCAGAGTTGGTGGCTGTGCCGGCCCCACTGGAG GTCGTGCTGGACTCAGAGTTGGTGGCTGTGCCGGCCCCACTGGAGGGTGTGCTGGACTCA GAGTTGGTGGCTGTGCTGGCCCCACTGGAGGTCGTGCTGGACTCAGAGTTGGTGGCTGTG CCAGCCCCATTGGAGGTCGTTCTGGACTCAGAGTTGGTGGCTGTGCTGGCCCCACTGGAG GTTGTGCTGGACTCAGAGTTGGTGGCAGTGCTGGCCCTACTGGACACTGTGCTGGACTCA GAGTTGGTGGCTGTGCTGGCCCCACTGGAGGTTGTGCTGGACTCAGAGTTGGTGGCTGTG CTGGCCTCACTGGAGGTTGTGCTGGAGTCAGAGTTGGTGGCTGTGCTAGCCCCACTGGAG GTTGTGCTGGAGTCAGAGTTGGTGGCTGTGCTGGCCCCACTGGAGGGTGTGCTGGACTCA GAGTTGGTGGCTGTGCTGGCCCCACTGGAGGTTGTGCTGGACTCAGAGTTGGTGGCTATG CTGATCCCACTGGACGCTGTGCTGAACTCAGAGTTGGTGGCTGTGCTGATCCCACTGGAG GTTGTATGGAACTCAGAGTTGGTGACTATGCTGACCCCATTGGAGGTCACGCTGGACCCT GAGATGGTGGCTGTGCTGACCCCACTGGAGGTCACACTGGACCCAGAGTTGGTGGCTGTG CTGGCTCCACTGGAGATCACACTGGATCCAGTGTTGGCAGAGACGGCTGTATAG >chr6_cox_hap1_44|SGP_v1.0_predicted_protein_44|458_AA MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS ELVAVLAPLDTVLDSELVAVLAPLEVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDP ELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLEVVLDS ELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDS ELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDS ELVAVLAPLEVVLDSELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDS ELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP EMVAVLTPLEVTLDPELVAVLAPLEITLDPVLAETAV* # Gene 45 (Forward). 2 exons. 39 aa. Score = 5.05 First 2451211 2451322 5.23 + 0 1 4.50 0.32 12.31 -39.20 AA 1: 38 chr6_cox_hap1_45 Terminal 2458324 2458328 -0.17 + 2 0 7.89 0.00 0.00 -0.70 AA 38: 39 chr6_cox_hap1_45 >chr6_cox_hap1_45|SGP_v1.0_predicted_cDNA_45|117_NN ATGGCGGGCATTATGGACATGGAGGAGGCCACTGAGGACACCATGGAGTGGATCACAGAG GGAGCCACCAAGGAGGCCACGGCAGGACAAGATGGCTGTGGCCATAGATTGGGTTAG >chr6_cox_hap1_45|SGP_v1.0_predicted_protein_45|39_AA MAGIMDMEEATEDTMEWITEGATKEATAGQDGCGHRLG* # Gene 46 (Reverse). 15 exons. 555 aa. Score = 44.54 Terminal 2529486 2529518 -4.47 - 0 0 0.00 3.28 3.33 -10.50 AA 545:555 chr6_cox_hap1_46 Internal 2562306 2562457 4.01 - 2 0 1.14 2.37 14.81 -53.20 AA 494:544 chr6_cox_hap1_46 Internal 2563731 2563832 4.46 - 2 1 2.74 2.04 11.32 -35.70 AA 460:494 chr6_cox_hap1_46 Internal 2563929 2564117 6.23 - 2 1 -0.69 2.94 19.62 -66.15 AA 397:460 chr6_cox_hap1_46 Internal 2564210 2564346 6.06 - 1 1 1.54 4.33 12.97 -47.95 AA 351:397 chr6_cox_hap1_46 Internal 2564492 2564537 2.34 - 2 2 1.91 6.09 3.48 -16.10 AA 336:351 chr6_cox_hap1_46 Internal 2564740 2564852 1.45 - 1 1 1.50 1.68 11.43 -39.55 AA 298:336 chr6_cox_hap1_46 Internal 2567436 2567542 -2.01 - 0 2 0.99 3.99 6.62 -37.45 AA 263:298 chr6_cox_hap1_46 Internal 2567649 2567759 5.29 - 0 0 1.62 5.38 9.90 -38.85 AA 226:262 chr6_cox_hap1_46 Internal 2569096 2569245 6.36 - 0 0 -0.64 6.15 14.22 -52.50 AA 176:225 chr6_cox_hap1_46 Internal 2569485 2569595 4.59 - 0 0 2.39 2.70 11.50 -38.85 AA 139:175 chr6_cox_hap1_46 Internal 2584167 2584325 2.98 - 0 0 1.96 2.33 13.90 -55.65 AA 86:138 chr6_cox_hap1_46 Internal 2584610 2584740 7.87 - 2 0 4.60 2.75 12.74 -45.85 AA 42: 85 chr6_cox_hap1_46 Internal 2593580 2593610 -0.52 - 0 1 1.96 6.66 0.35 -10.85 AA 32: 42 chr6_cox_hap1_46 First 2616831 2616923 -0.11 - 0 0 5.16 1.10 5.54 -32.55 AA 1: 31 chr6_cox_hap1_46 >chr6_cox_hap1_46|SGP_v1.0_predicted_cDNA_46|1665_NN ATGCAGACCCGCGGGGCAGTAATTCCGAGTCCAGCCTGGGGCGCGATCTGGAATCTTGAC TCGCTTGAAACACCACGGCGGATTCGGAGACAGGTGTGCAGAGAAGTCTACATTCCCATG TCAAGGAAGGTATTCAGCCAAACGACCATCTGCCGCTTTGAGGCTCTGCAGCTTAGCTTC AAGAACATGTGTAAGCTGCGGCCCTTGCTGCAGAAGTGGGTGGAGGAAGCTGACAACAAT GAAAATCTTCAGGAGATATGCAAAGCAGAAACCCTCGTGCAGGCCCGAAAGAGAAAGCGA ACCAGTATCGAGAACCGAGTGAGAGGCAACCTGGAGAATTTGTTCCTGCAGTGCCCGAAA CCCACACTGCAGCAGATCAGCCACATCGCCCAGCAGCTTGGGCTCGAGAAGGATCACTTG CAGGAGGACCGGGACAGCCTGCATGCCACCGCGGAGCTGCTGCAGGTGCGGGTGCAGAGC CTCACACACATCCTCGCCCTGCAGGAGGAGGAGCTGACCAGGAAGGTTCAACCTTCAGAT TCCCTGGAGCCTGAGTTTACCAGGAAGTGCCAGTCCCTGCTGAACCGCTGGCGGGAGAAG GTGTTTGCCCTCATGGTGCAGCTAAAGGCCCAGGAGCTGGAACACAGTGACTCTGTTAAG CAGCTGAAGGGACAGGTGGCCTCACTCCAGGAAAAAGTGACATCCCAGAGCCAGGAGCAG GCCATCCTGCAGCGATCCCTGCAGGACAAAGCCGCAGAGGTGGAGGTGGAGCGTATGGGT GCCAAGGGCCTGCAGTTGGAGCTGAGCCGTGCTCAGGAGGCCAGGCGTTGGTGGCAGCAG CAGACAGCCTCAGCCGAGGAGCAGTTGAGGCTTGTGGTCAATGCTGTCAGCAGCTCTCAG ATCTGGCTCGAGACCACCATGGCTAAGGTGGAAGGGGCTGCCGCCCAGCTTCCCAGCCTC AACAACCGACTCAGCTATGCTGTCCGCAAGGTCCACACCATTCGGGGCCTGATTGCTCGA AAGCTTGCCCTTGCTCAGCTGCGCCAGGAGAGCTGTCCCCTACCACCACCGGTCACAGAT GTGAGCCTTGAGTTGCAGCAGCTGCGGGAAGAACGGAACCGCCTGGATGCAGAACTGCAG CTGAGTGCCCGCCTCATCCAGCAGGAGGTGGGCCGGGCTCGGGAGCAAGGGGAGGCAGAG CGGCAGCAGCTGAGCAAGGTGGCCCAGCAGCTGGAGCAGGAGCTGCAGCAGACCCAGGAG TCCCTGGCTAGCTTGGGGCTGCAGCTGGAGGTAGCACGCCAGTGCCAGCAGGAGAGCACA GAGGAGGCTGCCAGTCTGCGGCAGGAGCTGACCCAGCAGCAGGAACTCTACGGGCAAGCC CTGCAAGAAAAGGTGGCTGAAGTGGAAACTCGGCTGCGGGAGCAACTCTCAGACACAGAG AGGAGGCTGAACGAGGCTCGGAGGGAGCATGCCAAGGCCGTGGTCTCCTTGCGCCAGATT CAGCGCAGAGCCGCCCAGGAAAAGGAGCGGAGCCAGGAACTCAGGCGTCTGCAGGAGGAG GCCCGGAAGGAGGAGGGGCAGCGACTGGCCCGGCGCTTGCAGGAGCTAGAGAGGGATAAG AACCTCATGCTGGAGCTCAACATCCTCACACAGGAGTTGGAGTGA >chr6_cox_hap1_46|SGP_v1.0_predicted_protein_46|555_AA MQTRGAVIPSPAWGAIWNLDSLETPRRIRRQVCREVYIPMSRKVFSQTTICRFEALQLSF KNMCKLRPLLQKWVEEADNNENLQEICKAETLVQARKRKRTSIENRVRGNLENLFLQCPK PTLQQISHIAQQLGLEKDHLQEDRDSLHATAELLQVRVQSLTHILALQEEELTRKVQPSD SLEPEFTRKCQSLLNRWREKVFALMVQLKAQELEHSDSVKQLKGQVASLQEKVTSQSQEQ AILQRSLQDKAAEVEVERMGAKGLQLELSRAQEARRWWQQQTASAEEQLRLVVNAVSSSQ IWLETTMAKVEGAAAQLPSLNNRLSYAVRKVHTIRGLIARKLALAQLRQESCPLPPPVTD VSLELQQLREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQTQE SLASLGLQLEVARQCQQESTEEAASLRQELTQQQELYGQALQEKVAEVETRLREQLSDTE RRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEEARKEEGQRLARRLQELERDK NLMLELNILTQELE* # Gene 47 (Reverse). 4 exons. 206 aa. Score = 45.70 Terminal 2682113 2682147 -6.16 - 2 0 0.00 2.18 3.76 -11.20 AA 195:206 chr6_cox_hap1_47 Internal 2686877 2686924 2.69 - 2 1 3.59 5.07 3.47 -16.80 AA 179:195 chr6_cox_hap1_47 Internal 2688612 2688887 17.57 - 2 1 1.71 -5.63 38.94 -96.60 AA 87:179 chr6_cox_hap1_47 First 2689138 2689396 31.61 - 0 1 4.61 -1.09 39.40 -90.65 AA 1: 87 chr6_cox_hap1_47 >chr6_cox_hap1_47|SGP_v1.0_predicted_cDNA_47|618_NN ATGAGGTATTTCGACACCGCCGTGTCCCGGCCCGGCCGCGGAGAGCCCCGCTTCATCTCA GTGGGCTACGTGGACGACACGCAGTTCGTGCGGTTCGACAGCGACGCCGCGAGTCCGAGA GGGGAGCCGCGGGCGCCGTGGGTGGAGCAGGAGGGGCCGGAGTATTGGGACCGGGAGACA CAGAACTACAAGCGCCAGGCACAGGCTGACCGAGTGAGCCTGCGGAACCTGCGCGGCTAC TACAACCAGAGCGAGGACGGGTCTCACACCCTCCAGAGGATGTATGGCTGCGACCTGGGG CCCGACGGGCGCCTCCTCCGCGGGTATGACCAGTCCGCCTACGACGGCAAGGATTACATC GCCCTGAACGAGGACCTGCGCTCCTGGACCGCCGCGGACACCGCGGCTCAGATCACCCAG CGCAAGTTGGAGGCGGCCCGTGCGGCGGAGCAGCTGAGAGCCTACCTGGAGGGCACGTGC GTGGAGTGGCTCCGCAGATACCTGGAGAACGGGAAGGAGACGCTGCAGCGCGCAGGCAGC AACAGTGCCCAGGGCTCTGATGAGTCTCTCATCACTTGTAAAGTTCATACTCCAGATTAT TGGAGTGGCATGGTGTGA >chr6_cox_hap1_47|SGP_v1.0_predicted_protein_47|206_AA MRYFDTAVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRET QNYKRQAQADRVSLRNLRGYYNQSEDGSHTLQRMYGCDLGPDGRLLRGYDQSAYDGKDYI ALNEDLRSWTAADTAAQITQRKLEAARAAEQLRAYLEGTCVEWLRRYLENGKETLQRAGS NSAQGSDESLITCKVHTPDYWSGMV* # Gene 48 (Forward). 2 exons. 321 aa. Score = 39.54 First 2697996 2698628 30.35 + 0 0 -1.13 3.46 58.31 -221.55 AA 1:211 chr6_cox_hap1_48 Terminal 2698713 2699042 9.19 + 0 0 -4.03 0.00 35.77 -114.45 AA 212:321 chr6_cox_hap1_48 >chr6_cox_hap1_48|SGP_v1.0_predicted_cDNA_48|963_NN ATGACCCACATCGTGCGGGAAGTCGACAGGCCAGGATCCAAGGTGAACAAGAAGGAGGTG GTGGAGGCTGTGACCATTGTGGAGAGGCCACCAGTGGGCATTGTGGGCTGCGTGGAAACC CCTCAAGGCTTCCGGACTTGCAAGACTGTCTTCGCTGAGCACATCAGTGATGAATGCAAG AGACGTTTCTATAAGAACTGGCATAAATCTAAGAAGAAGGCCTTTACCAAGTACTGCAAG AAATGGCAGGATGAGGATGGCAAGAAGCAGCTGGAGAAGGACTTCAGCAGCATGAAGAAG TACTGCCAAGTCATCTGCGTCATTGCCCACACCCAGATGCAACTGCTTCCTCTGTGCCAG AAGAAGGCCCACCTGATGGAGATCCAGGTGAATGGAGGCACTGTGGCTGAGAAGCTGGAC TGGGCTGGCGAGAGGCTCAAGCACCAGGTACCTGTGAACCAAGTGTTTGGGCAGGATGAG ATGATCGACGTCATCAGGGTGACCAAGGGCAAAGGCTACAAAAGGGTCACCAGTCGTTGG CACACCAAGAAGCTGCCCCGCAAGACCCACCAAGGCCTGTGCAAGGTGGCCTGTATTGGG GCATGGCATCCTGCTCGTGTGGGCTTCTCTGTGGATGGCAAGCTGATCAAGAACAATGCC TCCACTGACTATGACCTGTCTGACAAGAGCATCAACCCTTTGGGTGGCTTCGTCCACTAT GGTGAAGTGACCAATGACTTTGTCATGCTGAAAGGCTGTGTGGTGGGAACCAAGAAGTGG GTGCTCACCCTCCGCAAGTCCTTGCTGGTGCAGACAAAGCAGCGGGCTCTGGAGAAGATT GACCTTAAGTTCATTGACACCCCCTCCAAGTTTGGCCATGGCCACTTCCAGACCATGGAG GAGAAGAAAGCATTCATGGGACCACTCAAGAAAGACCGAATTGCAAAGGAAGAAGGAGCT TAA >chr6_cox_hap1_48|SGP_v1.0_predicted_protein_48|321_AA MTHIVREVDRPGSKVNKKEVVEAVTIVERPPVGIVGCVETPQGFRTCKTVFAEHISDECK RRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVICVIAHTQMQLLPLCQ KKAHLMEIQVNGGTVAEKLDWAGERLKHQVPVNQVFGQDEMIDVIRVTKGKGYKRVTSRW HTKKLPRKTHQGLCKVACIGAWHPARVGFSVDGKLIKNNASTDYDLSDKSINPLGGFVHY GEVTNDFVMLKGCVVGTKKWVLTLRKSLLVQTKQRALEKIDLKFIDTPSKFGHGHFQTME EKKAFMGPLKKDRIAKEEGA* # Gene 49 (Reverse). 4 exons. 218 aa. Score = 52.65 Terminal 2771456 2771499 -6.11 - 2 0 0.00 3.36 2.58 -14.35 AA 204:218 chr6_cox_hap1_49 Internal 2773138 2773413 21.19 - 2 1 0.41 -3.93 41.13 -96.60 AA 112:204 chr6_cox_hap1_49 Internal 2773660 2773929 32.67 - 2 1 4.10 2.62 37.89 -94.50 AA 22:112 chr6_cox_hap1_49 First 2774058 2774121 4.90 - 0 1 4.10 3.31 6.14 -22.40 AA 1: 22 chr6_cox_hap1_49 >chr6_cox_hap1_49|SGP_v1.0_predicted_cDNA_49|654_NN ATGGCGCCCCGAACCGTCCTCCTGCTGCTCTCGGCGGCCCTGGCCCTGACCGAGACCTGG GCCGGCTCCCACTCCATGAGGTATTTCGACACCGCCATGTCCCGGCCCGGCCGCGGGGAG CCCCGCTTCATCTCAGTGGGCTACGTGGACGACACGCAGTTCGTGAGGTTCGACAGCGAC GCCGCGAGTCCGAGAGAGGAGCCGCGGGCGCCGTGGATAGAGCAGGAGGGGCCGGAGTAT TGGGACCGGAACACACAGATCTTCAAGACCAACACACAGACTGACCGAGAGAGCCTGCGG AACCTGCGCGGCTACTACAACCAGAGCGAGGCCGGGTCTCACACCCTCCAGAGCATGTAC GGCTGCGACGTGGGGCCGGACGGGCGCCTCCTCCGCGGGCATAACCAGTACGCCTACGAC GGCAAGGATTACATCGCCCTGAACGAGGACCTGCGCTCCTGGACCGCGGCGGACACCGCG GCTCAGATCACCCAGCGCAAGTGGGAGGCGGCCCGTGTGGCGGAGCAGGACAGAGCCTAC CTGGAGGGCACGTGCGTGGAGTGGCTCCGCAGATACCTGGAGAACGGGAAGGACACGCTG GAGCGCGCGGGCAGCGACAGTGCCCAGGGCTCTGATGTGTCTCTCACAGCTTGA >chr6_cox_hap1_49|SGP_v1.0_predicted_protein_49|218_AA MAPRTVLLLLSAALALTETWAGSHSMRYFDTAMSRPGRGEPRFISVGYVDDTQFVRFDSD AASPREEPRAPWIEQEGPEYWDRNTQIFKTNTQTDRESLRNLRGYYNQSEAGSHTLQSMY GCDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAARVAEQDRAY LEGTCVEWLRRYLENGKDTLERAGSDSAQGSDVSLTA* # Gene 50 (Forward). 2 exons. 44 aa. Score = 2.16 First 2828217 2828343 4.60 + 0 1 3.40 2.43 10.73 -44.45 AA 1: 43 chr6_cox_hap1_50 Terminal 2834023 2834027 -2.44 + 2 0 6.40 0.00 0.00 -0.70 AA 43: 44 chr6_cox_hap1_50 >chr6_cox_hap1_50|SGP_v1.0_predicted_cDNA_50|132_NN ATGAACGTCAGGAATTTCTTGAAGGAAGATGCCATGAAGACCAAGACACACTATCACGCT ATGCATGCAGACTGCCTGCAGGAACTACGGCGATATCTAGAATCCGGCGTAGTCCTGAGG AGAACAGGTTGA >chr6_cox_hap1_50|SGP_v1.0_predicted_protein_50|44_AA MNVRNFLKEDAMKTKTHYHAMHADCLQELRRYLESGVVLRRTG* # Gene 51 (Reverse). 6 exons. 217 aa. Score = 28.37 Terminal 2919628 2919674 -5.02 - 2 0 0.00 2.70 3.88 -15.40 AA 202:217 chr6_cox_hap1_51 Internal 2934209 2934280 3.08 - 2 1 2.13 2.98 8.86 -25.20 AA 178:202 chr6_cox_hap1_51 Internal 2944725 2944872 14.44 - 0 1 2.17 6.11 17.31 -51.80 AA 129:178 chr6_cox_hap1_51 Internal 2944999 2945143 8.79 - 1 0 0.81 2.55 18.49 -50.75 AA 80:128 chr6_cox_hap1_51 Internal 2945242 2945351 0.67 - 0 2 3.82 1.93 8.23 -38.50 AA 44: 80 chr6_cox_hap1_51 First 2946726 2946854 6.41 - 0 0 2.09 0.94 15.98 -45.15 AA 1: 43 chr6_cox_hap1_51 >chr6_cox_hap1_51|SGP_v1.0_predicted_cDNA_51|651_NN ATGGAGATCTTCGTGGATGATGAGACGAAGTTGACGCTGCATGGGTTGCAGCAGTACTAC GTGAAACTGAAGGACAACGAGAAGAACCGGAAGCTCTTTGACCTTCTGGATGTCCTTGAG TTCAACCAGGTGGTGATCTTTGTGAAGTCTGTGCAGCGGTGCATTGCCTTGGCCCAGCTA CTAGTGGAGCAGAACTTCCCAGCCATTGCCATCCACCGTGGGATGCCCCAGGAGGAGAGG CTTTCTCGGTATCAGCAGTTTAAAGATTTTCAACGACGAATTCTTGTGGCTACCAACCTA TTTGGCCGAGGCATGGACATCGAGCGGGTGAACATTGCTTTTAATTATGACATGCCTGAG GATTCTGACACCTACCTGCATCGGGTGGCCAGAGCAGGCCGGTTTGGCACCAAGGGCTTG GCTATCACATTTGTGTCCGATGAGAATGATGCCAAGATCCTCAATGATGTGCAGGATCGC TTTGAGGTCAATATTAGTGAGCTGCCTGATGAGATAGACATCTCCTCCTACAACGCCACC ATCAGGAGCCCCATACTATCAGCCATGGTCAACCCCACCGTGTCCTTCAACATCGCTGTC AATGCGCAGGAAGGGCTGACCATCCAGATGTCCCTCAGCGAGAAACCCTGA >chr6_cox_hap1_51|SGP_v1.0_predicted_protein_51|217_AA MEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQL LVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPE DSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYNAT IRSPILSAMVNPTVSFNIAVNAQEGLTIQMSLSEKP* # Gene 52 (Reverse). 6 exons. 249 aa. Score = 17.56 Terminal 2947764 2947775 -5.14 - 0 0 0.00 5.94 -1.12 -3.15 AA 246:249 chr6_cox_hap1_52 Internal 2949313 2949431 6.71 - 2 0 0.03 5.62 13.18 -41.65 AA 206:245 chr6_cox_hap1_52 Internal 2950446 2950629 6.93 - 0 1 5.20 3.00 14.04 -64.40 AA 145:206 chr6_cox_hap1_52 Internal 2952709 2952801 0.87 - 0 0 4.33 1.94 7.34 -32.55 AA 114:144 chr6_cox_hap1_52 Internal 2953093 2953220 -2.01 - 2 0 1.21 2.99 9.22 -44.80 AA 71:113 chr6_cox_hap1_52 First 2954266 2954476 10.21 - 0 1 2.28 0.92 22.17 -73.85 AA 1: 71 chr6_cox_hap1_52 >chr6_cox_hap1_52|SGP_v1.0_predicted_cDNA_52|747_NN ATGGCAGAGAACGATGTGGACAATGAGCTCTTGGACTATGAAGATGATGAGGTGGAGACA GCAGCTGGGGGAGATGGGGCTGAGGCCCCTGCCAAGAAGGATGTCAAGGGCTCCTATGTC TCCATCCACAGCTCTGGCTTTCGTGACTTCCTGCTCAAGCCAGAGTTGCTCCGGGCCATT GTCGACTGTGGCTTTGAGCATCCGTCAGAAGTCCAGCATGAGTGCATCCCTCAGGCCATT CTGGGAATGGATGTCCTGTGCCAGGCCAAGTCGGGCATGGGAAAGACAGCAGTGTTTGTC TTGGCCACACTGCAACAGCTGGAGCCAGTTACTGGGCAGGTGTCTGTGCTGGTGATGTGT CACACTCGGGAGTTGGCTTTTCAGATCAGCAAGGAATATGAGCGCTTCTCTAAATACATG CCCAATGTCAAGGTTGCTGTTTTTTTTGGTGGTCTGTCTATCAAGAAGGATGAAGAGGTG CTGAAGAAGAACTGCCCGCATATCGTCGTGGGGACTCCAGGCCGTATCCTAGCCCTGGCT CGAAATAAGAGCCTCAACCTCAAACACATTAAACACTTTATTTTGGATGAATGTGATAAG ATGCTTGAACAGCTCGACATGCGTCGGGATGTCCAGGAAATTTTTCGCATGACCCCCCAC GAGAAGCAGGTCATGATGTTCAGTGCTACCTTGAGCAAAGAGATCCGTCCAGTCTGCCGC AAGTTCATGCAAGATGGGGTTTTTTAA >chr6_cox_hap1_52|SGP_v1.0_predicted_protein_52|249_AA MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR KFMQDGVF* # Gene 53 (Reverse). 3 exons. 119 aa. Score = 7.83 Terminal 2959351 2959524 -1.20 - 0 0 0.00 4.72 10.96 -59.85 AA 62:119 chr6_cox_hap1_53 Internal 2960052 2960152 12.16 - 2 0 4.12 5.84 11.52 -35.35 AA 28: 61 chr6_cox_hap1_53 First 2960417 2960498 -3.14 - 0 1 1.23 0.79 7.49 -28.70 AA 1: 28 chr6_cox_hap1_53 >chr6_cox_hap1_53|SGP_v1.0_predicted_cDNA_53|357_NN ATGGCCAGTCAGTCCCAAGGTATCCAGCAGCTTCTGCAAGCTGAGAAGCGGGCAGCTGAG AAGGTGGCAGATGCCAGAAAGAGGAAGGCCCGGCGACTGAAGCAGGCAAAGGAGGAGGCA CAGATGGAGGTGGAGCAATACCGCAGAGAGCGAGAGCACGAATTCCAGAGCAAGCAGCAG GCGGCCATGGGCTCCCAGGGGAACCTGTCTGCTGAGGTGGAGCAGGCTACAAGGCGCCAG GTGCAGGGCATGCAGAGCTCCCAGCAGAGAAACCGAGAGCGTGTCCTGGCCCAGCTTCTT GGCATGGTCTGCGACGTCAGGCCCCAGGTCCACCCCAACTACCGGATTTCTGCCTAG >chr6_cox_hap1_53|SGP_v1.0_predicted_protein_53|119_AA MASQSQGIQQLLQAEKRAAEKVADARKRKARRLKQAKEEAQMEVEQYRREREHEFQSKQQ AAMGSQGNLSAEVEQATRRQVQGMQSSQQRNRERVLAQLLGMVCDVRPQVHPNYRISA* # Gene 54 (Forward). 5 exons. 391 aa. Score = 14.23 First 2962113 2962377 -0.90 + 0 1 1.01 3.06 15.74 -92.75 AA 1: 89 chr6_cox_hap1_54 Internal 2971554 2971775 0.84 + 2 1 2.82 3.93 12.31 -77.70 AA 89:163 chr6_cox_hap1_54 Internal 2971948 2972163 1.51 + 2 1 3.61 1.45 14.38 -75.60 AA 163:235 chr6_cox_hap1_54 Internal 2990667 2990714 1.77 + 2 1 7.29 4.02 -0.49 -16.80 AA 235:251 chr6_cox_hap1_54 Terminal 2991016 2991437 11.00 + 2 0 5.26 0.00 31.30 -146.65 AA 251:391 chr6_cox_hap1_54 >chr6_cox_hap1_54|SGP_v1.0_predicted_cDNA_54|1173_NN ATGGCCTCCACTTCCCGCCGCCAACGCCGAGAACGTCGCTTTCGTCGTTACTTGTCTGCA GGACGGCTGGTCCGGGCCCAGGCCCTCCTCCAGCGACACCCAGGCCTCGATGTAGATGCT GGGCAGCCCCCACCACTGCACCGGGCCTGTGCCCGCCACGATGCCCCTGCCCTGTGCCTG CTGCTTCGGCTCGGGGCTGACCCTGCCCACCAGGACCGCCATGGGGACACGGCACTGCAT GCTGCTGCCCGCCAGGGCCCAGATGCCTACACCGATTTCTTCCTCCCGCTGCTAAGCCGC TGTCCCTCCGCCATGGGAATAAAGAATAAGGATGGGGAGACCCCTGGCCAAATTTTGGGC TGGGGACCCCCCTGGGATTCTGCTGAAGAGGAGGAAGAAGATGATGCCTCCAAGGAGCGG GAATGGAGACAGAAGCTCCAGGGTGAGCTGGAGGACGAGTGGCAGGAAGTCATGGGGAGG TTTGAAGGTGATGCCTCCCATGAAACCCAGGAACCTGAGTCCTTCTCAGCCTGGTCAGAT CGCCTGGCCCGGGAACATGCCCAGAAGTGCCAGCAGCAGCAGCGAGAAGCAGAGGGATCC TGTCGACCCCCACGTGCTGAGGGCTCCAGCCAGAGCTGGCGACAGCAGGAGGAGGAGCAG CGGCTCTTCAGGGAGCGAGCCCGGGCCAAGGAGGAAGAGCTGCGATCATCTTCTCGAACC CCGAGTGACAAGCCTGTAGCCCATGTTGTAGCAAACCCTCAAGCTGAGGGGCAGCTCCAG TGGCTGAACCGCCGGGCCAATGCCCTCCTGGCCAATGGCGTGGAGCTGAGAGATAACCAG CTGGTGGTGCCATCAGAGGGCCTGTACCTCATCTACTCCCAGGTCCTCTTCAAGGGCCAA GGCTGCCCCTCCACCCATGTGCTCCTCACCCACACCATCAGCCGCATCGCCGTCTCCTAC CAGACCAAGGTCAACCTCCTCTCTGCCATCAAGAGCCCCTGCCAGAGGGAGACCCCAGAG GGGGCTGAGGCCAAGCCCTGGTATGAGCCCATCTATCTGGGAGGGGTCTTCCAGCTGGAG AAGGGTGACCGACTCAGCGCTGAGATCAATCGGCCCGACTATCTCGACTTTGCCGAGTCT GGGCAGGTCTACTTTGGGATCATTGCCCTGTGA >chr6_cox_hap1_54|SGP_v1.0_predicted_protein_54|391_AA MASTSRRQRRERRFRRYLSAGRLVRAQALLQRHPGLDVDAGQPPPLHRACARHDAPALCL LLRLGADPAHQDRHGDTALHAAARQGPDAYTDFFLPLLSRCPSAMGIKNKDGETPGQILG WGPPWDSAEEEEEDDASKEREWRQKLQGELEDEWQEVMGRFEGDASHETQEPESFSAWSD RLAREHAQKCQQQQREAEGSCRPPRAEGSSQSWRQQEEEQRLFRERARAKEEELRSSSRT PSDKPVAHVVANPQAEGQLQWLNRRANALLANGVELRDNQLVVPSEGLYLIYSQVLFKGQ GCPSTHVLLTHTISRIAVSYQTKVNLLSAIKSPCQRETPEGAEAKPWYEPIYLGGVFQLE KGDRLSAEINRPDYLDFAESGQVYFGIIAL* # Gene 55 (Forward). 7 exons. 214 aa. Score = 13.17 First 3006586 3006655 1.32 + 0 1 1.64 0.52 9.64 -24.50 AA 1: 24 chr6_cox_hap1_55 Internal 3029423 3029484 1.54 + 2 0 4.64 0.66 7.04 -21.70 AA 24: 44 chr6_cox_hap1_55 Internal 3029572 3029638 4.05 + 0 1 3.76 3.70 6.72 -23.45 AA 45: 67 chr6_cox_hap1_55 Internal 3030006 3030047 3.16 + 2 1 2.94 2.84 6.71 -14.70 AA 67: 81 chr6_cox_hap1_55 Internal 3030246 3030408 0.60 + 2 2 4.51 1.78 10.15 -57.05 AA 81:135 chr6_cox_hap1_55 Internal 3039919 3040061 0.15 + 1 1 4.56 5.66 4.51 -50.05 AA 135:183 chr6_cox_hap1_55 Terminal 3040671 3040765 2.35 + 2 0 4.03 0.00 10.48 -32.20 AA 183:214 chr6_cox_hap1_55 >chr6_cox_hap1_55|SGP_v1.0_predicted_cDNA_55|642_NN ATGATCAAGATGAGCAACAGCATCCAGGCCATGTCGGAAGATGTCCCAGTTGGCGAAGGG GATCTGAGCAGAGGAAAAGCTTTCGGACTGCTGAAGGCCCAGCAGGAAGAGAGGCTGGAT GAGATCAACAAGCAATTCCTAGACGATCCCAAATATAGCAGTGATGAGGATCTGCCCTCC AAACTGGAAGGCTTCAAAGAGAAATACATGGAGTTTGACCTTAATGGAAATGGCGATATT GATATCATGTCCCTGAAACGAATGCTGGAGAAACTTGGAGTCCCCAAGACTCACCTAGAG CTAAAGAAATTAATTGGAGAGGTGTCCAGTGGCTCCGGGGAGACGTTCAGCTACCCTGAC TTTCTCAGGATGATGCTGGGCAAGAGATCTGCCATCCTAAAAATCCGTTTTCCCCGTGTG GCGGGCCCCCGAGGCTCAGGGCCACCAATGCGCTTAGTAGAGCCTGTGGGTCGTCCCTCT ATTCTCAAAGAGGATAATCTCAAAGAGTTTGATCAGTTGGATCAGGAGAATGATGATGGT TGGGCAGGGGCCCATGAAGAGGTTGACTACACTGAAAAGCTCAAGTTCAGCGATGAGGAA GATGGGCGAGACTCTGATGAGGAGGGAGCTGAGGGCCAGTGA >chr6_cox_hap1_55|SGP_v1.0_predicted_protein_55|214_AA MIKMSNSIQAMSEDVPVGEGDLSRGKAFGLLKAQQEERLDEINKQFLDDPKYSSDEDLPS KLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPD FLRMMLGKRSAILKIRFPRVAGPRGSGPPMRLVEPVGRPSILKEDNLKEFDQLDQENDDG WAGAHEEVDYTEKLKFSDEEDGRDSDEEGAEGQ* # Gene 56 (Reverse). 8 exons. 257 aa. Score = 21.74 Terminal 3053030 3053125 3.72 - 0 0 0.00 5.17 10.26 -32.55 AA 226:257 chr6_cox_hap1_56 Internal 3054099 3054206 4.48 - 0 0 1.06 7.17 8.16 -37.80 AA 190:225 chr6_cox_hap1_56 Internal 3055439 3055492 0.98 - 0 0 1.47 6.53 3.25 -18.90 AA 172:189 chr6_cox_hap1_56 Internal 3058427 3058504 0.21 - 0 0 3.49 4.26 3.76 -27.30 AA 146:171 chr6_cox_hap1_56 Internal 3059309 3059506 0.42 - 0 0 2.19 1.72 14.34 -69.30 AA 80:145 chr6_cox_hap1_56 Internal 3062580 3062654 3.27 - 0 0 5.88 3.26 4.67 -26.25 AA 55: 79 chr6_cox_hap1_56 Internal 3062814 3062867 3.45 - 0 0 1.52 4.46 7.28 -18.90 AA 37: 54 chr6_cox_hap1_56 First 3065559 3065666 5.20 - 0 0 3.65 3.99 8.62 -37.80 AA 1: 36 chr6_cox_hap1_56 >chr6_cox_hap1_56|SGP_v1.0_predicted_cDNA_56|771_NN ATGGAGCCTAATGATAGTACCAGTACCGCTGTGGAGGAGCCTGACAGCTTGGAGGTGTTG GTGAAGACCTTGGACTCTCAAACTCGTACCTTTATTGTGGGGGCCCAGAGTGACGGCTCT GCTGTGGATGTTCACATCAACATGGAACAGGCCCCGATTCAGAGTGAGCCCCGGGTACGG CTGGTGATGGCTCAGCACATGATCAGGGATATACAGACCTTACTATCCCGGATGGAGCAC GAGGGCCGGGAGGAGGATCAGCGGTTGATCAACTTGGTAGGGGAGAGCCTGCGACTGCTG GGCAACACCTTTGTTGCACTGTCTGACCTGCGCTGCAATCTGGCCTGCACGCCCCCACGA CACCTGCATGTGGTCCGGCCTATGTCTCACTACACCACCCCCATGGTGCTCCAGCAGGCA GCCATTCCCATACAGATTCTGGCACACAGCCTGGTGGTGTTCCGAGTGCTCCCACTGGCC CCCTGGGACCCCCTGGTCATGGCCAAACCCTGGATGGCAACCCACACATTGATCACGGGG CTAGAAGAGTATGTGCGGGAGAGTTTTGAATGGGTCCCTATTATCCAGCAGGACATTCAG AGCCAGCGGAAGGTGAAACCGCAGCCCCCTCTGAGTGATGCCTACCTCAGTGGTATGCCT GCCAAGAGACGCAAGCTCCGGTCTGATATACAAAAACGACTGCAGGAAGACCCCAACTAC AGTCCCCAGCGCTTCCCCAATGCCCAGCGGGCCTTTGCTGATGATCCTTAG >chr6_cox_hap1_56|SGP_v1.0_predicted_protein_56|257_AA MEPNDSTSTAVEEPDSLEVLVKTLDSQTRTFIVGAQSDGSAVDVHINMEQAPIQSEPRVR LVMAQHMIRDIQTLLSRMEHEGREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPR HLHVVRPMSHYTTPMVLQQAAIPIQILAHSLVVFRVLPLAPWDPLVMAKPWMATHTLITG LEEYVRESFEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRKLRSDIQKRLQEDPNY SPQRFPNAQRAFADDP* # Gene 57 (Forward). 6 exons. 230 aa. Score = 15.02 First 3069869 3069982 -5.49 + 0 0 0.72 2.96 5.49 -39.90 AA 1: 38 chr6_cox_hap1_57 Internal 3081772 3081874 9.29 + 0 1 3.55 2.33 14.03 -36.05 AA 39: 73 chr6_cox_hap1_57 Internal 3082443 3082558 8.96 + 2 0 1.26 2.54 16.72 -40.60 AA 73:111 chr6_cox_hap1_57 Internal 3083001 3083076 -1.00 + 0 1 2.34 3.89 4.83 -26.60 AA 112:137 chr6_cox_hap1_57 Internal 3083223 3083412 4.05 + 2 2 1.43 2.79 16.26 -66.50 AA 137:200 chr6_cox_hap1_57 Terminal 3083740 3083830 -0.79 + 1 0 1.86 0.00 10.39 -30.80 AA 200:230 chr6_cox_hap1_57 >chr6_cox_hap1_57|SGP_v1.0_predicted_cDNA_57|690_NN ATGTTCCACCAAATTTGGGCAGCTCTGCTCTACTTCTATGGTATTATCCTTAACTCCATC TACCAGTGCCCTGAGCACAGTCAACTGACAACTCTGGGCGTGGATGGGAAGGAGGTGGAT GAAGACTACATCCAGGACAAATTTAATCTTACTGGACTCAATGAGCAGGTCCCTCACTAT CGACAAGCTCTAGACATGATCTTGGACCTGGAGCCTGATGAAGAACTGGAAGACAACCCC AACCAGAGTGACCTGATTGAGCAGGCAGCCGAGATGCTTTATGGATTGATCCACGCCCGC TACATCCTTACCAACCGTGGCATCGCCCAGATGTTGGAAAAGTACCAGCAAGGAGACTTT GGTTACTGTCCTCGTGTGTACTGTGAGAACCAGCCAATGCTTCCCATTGGCCTTTCAGAC ATCCCAGGTGAAGCCATGGTGAAGCTCTACTGCCCCAAGTGCATGGATGTGTACACACCC AAGTCATCAAGACACCATCACACGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACATG CTCTTCATGGTGCATCCCGAGTACCGGCCCAAGAGACCTGCCAACCAGTTTGTGCCCAGG CTCTACGGTTTCAAGATCCATCCGATGGCCTACCAGCTGCAGCTCCAAGCCGCCAGCAAC TTCAAGAGCCCAGTCAAGACGATTCGCTGA >chr6_cox_hap1_57|SGP_v1.0_predicted_protein_57|230_AA MFHQIWAALLYFYGIILNSIYQCPEHSQLTTLGVDGKEVDEDYIQDKFNLTGLNEQVPHY RQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDF GYCPRVYCENQPMLPIGLSDIPGEAMVKLYCPKCMDVYTPKSSRHHHTDGAYFGTGFPHM LFMVHPEYRPKRPANQFVPRLYGFKIHPMAYQLQLQAASNFKSPVKTIR* # Gene 58 (Reverse). 14 exons. 410 aa. Score = 6689.80 Terminal 3097114 3097165 -3.06 - 1 0 0.00 3.75 4.39 -17.15 AA 393:410 chr6_cox_hap1_58 Internal 3101944 3102006 7.35 - 1 2 3.92 2.42 9.80 -22.05 AA 372:393 chr6_cox_hap1_58 Internal 3102152 3102208 5.19 - 1 2 2.71 2.47 9.22 -19.95 AA 353:372 chr6_cox_hap1_58 Internal 3102626 3102689 -0.18 - 2 2 3.66 3.68 3.24 -22.40 AA 332:353 chr6_cox_hap1_58 Internal 3103484 3103607 14.70 - 0 1 0.04 6.20 18.23 -43.40 AA 291:332 chr6_cox_hap1_58 Internal 3105707 3105821 5.76 - 1 0 4.21 4.96 8.40 -40.25 AA 252:290 chr6_cox_hap1_58 Internal 3107262 3107335 1.32 - 0 2 3.15 2.38 7.20 -25.90 AA 228:252 chr6_cox_hap1_58 Internal 3110850 3110935 12.58 - 2 0 3.71 4.98 12.51 -30.10 AA 199:227 chr6_cox_hap1_58 Internal 3142547 3142646 11.04 - 0 1 3.15 3.89 13.52 -35.00 AA 166:199 chr6_cox_hap1_58 Internal 3144764 3144904 10.17 - 0 0 -3.32 5.80 20.28 -49.35 AA 119:165 chr6_cox_hap1_58 Internal 3146118 3146299 3.69 - 2 0 1.59 3.41 15.12 -63.70 AA 58:118 chr6_cox_hap1_58 Internal 3147467 3147573 4.03 - 1 1 1.52 4.24 10.52 -37.45 AA 22: 58 chr6_cox_hap1_58 Internal 3150001 3150031 6625.38 - 2 2 -3.17 -2.99 -1.31 34989.50 AA 12: 22 chr6_cox_hap1_58 First 3159333 3159366 -8.18 - 0 1 4.25 2.25 -3.11 -11.90 AA 1: 12 chr6_cox_hap1_58 >chr6_cox_hap1_58|SGP_v1.0_predicted_cDNA_58|1230_NN ATGCTCAAGCTTGGGGGGCGGGGGGTACAAATAGGGGTGGTTTTGAGAGGGGAAGACATT AACTTGTACCCCAAGCTGGCAGCTCTGAACCCTGAGTCCAACACAGCTGGGCTGGACATA TTTGCCAAATTTTCTGCCTACATCAAGAATTCAAACCCAGCACTCAATGACAATCTGGAG AAGGGACTCCTGAAAGCCCTGAAGGTTTTAGACAATTACTTAACATCCCCCCTCCCAGAA GAAGTGGATGAAACCAGTGCTGAAGATGAAGGTGTCTCTCAGAGGAAGTTTTTGGATGGC AACGAGCTCACCCTGGCTGACTGCAACCTGTTGCCAAAGTTACACATAGTACAGGTGGTG TGTAAGAAGTACCGGGGATTCACCATCCCCGAGGCCTTCCGGGGAGTGCATCGGTACTTG AGCAATGCCTACGCCCGGGAAGAATTCGCTTCCACCTGTCCAGATGATGAGGAGATCGAG CTCGCCTATGAGCAAGTCGATGGAGTCCGCAAAGCCCTGCAAGACCTGGGGCTCCGAATT GTGGAAATAGGAGACGAGAACGCGACGCTGGATGGCACTGACGTTCTCTTCACCGGCATT GGCCGCTGGACCAACCCCCAGTACCGGCAGTTCATCACCATCTTGGAAGCAACACATCGG AACCAGTCTTCAGAAAACAAGAGGCAGCTTGCCAACTACAACTTTGACTTCCGGAGCTGG CCAGTCGACTTCCACTGGGAAGAACCCAGCAGCCGCTACCTGGTGGCGCACACCCTAGGG CGCCGGATGCTGTATCCAGGCTCTGTGTACCTGCTGCAGAAGGCCCTCATGCCTGTGCTG CTGCAGGGCCAGGCCCGACTGGTGGAAGAGGGGGTGCCATTCCCGCAGAATGAGGCTAAT GCCATGGATGTGGTGGTCCAGTTTGCCATCCACCGCCTGGGCTTCCAGCCCCAGGACATC ATCATCTACGCCTGGTCCATCGGCGGCTTCACTGGGGGCCTGGTGACCAGGACCGTGAGG CAGCATCTCAATCTAAACAACGCGGAGCAGCTGTGCAGATACCAGGGTCCTGTACTGCTG ATCCGGAGAACCAAGGATGAGATCATCACCACCACGGTTCCTGAGGACATCATGTCCAAC CGAGGCAATGACCTCCTGCTGAAGCTCCTGCAGCATCGGAAAACCTTCGCGGAACCCGTC ACCATGGAAACGAACTCTCTGGACTCTTAG >chr6_cox_hap1_58|SGP_v1.0_predicted_protein_58|410_AA MLKLGGRGVQIGVVLRGEDINLYPKLAALNPESNTAGLDIFAKFSAYIKNSNPALNDNLE KGLLKALKVLDNYLTSPLPEEVDETSAEDEGVSQRKFLDGNELTLADCNLLPKLHIVQVV CKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDDEEIELAYEQVDGVRKALQDLGLRI VEIGDENATLDGTDVLFTGIGRWTNPQYRQFITILEATHRNQSSENKRQLANYNFDFRSW PVDFHWEEPSSRYLVAHTLGRRMLYPGSVYLLQKALMPVLLQGQARLVEEGVPFPQNEAN AMDVVVQFAIHRLGFQPQDIIIYAWSIGGFTGGLVTRTVRQHLNLNNAEQLCRYQGPVLL IRRTKDEIITTTVPEDIMSNRGNDLLLKLLQHRKTFAEPVTMETNSLDS* # Gene 59 (Forward). 9 exons. 267 aa. Score = 12.25 First 3167460 3167507 -1.23 + 0 0 -0.59 4.74 4.87 -16.80 AA 1: 16 chr6_cox_hap1_59 Internal 3172035 3172163 3.59 + 0 0 5.62 0.97 10.34 -45.15 AA 17: 59 chr6_cox_hap1_59 Internal 3172967 3173047 0.35 + 0 0 4.76 2.91 4.46 -28.35 AA 60: 86 chr6_cox_hap1_59 Internal 3173295 3173382 -1.50 + 0 1 -0.62 1.73 10.70 -30.80 AA 87:116 chr6_cox_hap1_59 Internal 3173656 3173845 6.79 + 2 2 1.49 4.61 16.19 -66.50 AA 116:179 chr6_cox_hap1_59 Internal 3175620 3175650 0.13 + 1 0 7.13 1.87 0.40 -10.85 AA 179:189 chr6_cox_hap1_59 Internal 3175688 3175735 1.47 + 0 0 4.95 0.63 5.98 -16.80 AA 190:205 chr6_cox_hap1_59 Internal 3175982 3176055 4.12 + 0 2 5.37 1.04 8.27 -25.90 AA 206:230 chr6_cox_hap1_59 Terminal 3176290 3176401 -1.46 + 1 0 4.75 0.00 7.73 -38.15 AA 230:267 chr6_cox_hap1_59 >chr6_cox_hap1_59|SGP_v1.0_predicted_cDNA_59|801_NN ATGAAGTTGTCCCACACCAAGGTCAGCGACTGGCAGGTTCTCTACAAGACTGTGTACAGT GCCCTGGGCCTGAGGGATGCCTGCCGCTCCCTGCCGCAGTCCATCCAGCTCTTTCGGGAC ATTGCCCAAGAGTTCTCTGATGACCTGCACCATATCGCCAGCCTCATTGGGAAAGTAATT GGCTTCCTTCTTTCTATTCCCCGCCTGCCTTCCATGGTAGAGGCCAGTGACTTTGAGATT AATGGACTGGACTTCATGTTTCTCTCAGAGGAGAAGCTGCACTATCGTAGTGCCCGAACC AAGGAGCTGGATGCATTGCTGGGGGACCTGCACTGCGAGATCCGGGACCAGGAGACGCTG CTGATGTACCAGCTACAGTGCCAGGTGCTGGCACGAGCAGCTGTCTTAACCCGAGTATTG GACCTTGCCTCCCGCCTGGACGTCCTGCTGGCTCTTGCCAGTGCTGCCCGGGACTATGGC TACTCAAGGCCGCGTTACTCCCCACAAGTCCTTGGGGTACGAATCCAGAATGGCAGGATT GGCCAAGGGTTTCAGGACAGGAAGGAGACCATGGAGACCTGTGAGGATGGCAACGATCTT GTCTTCTTCTATCAGGTCTCAGACTTGATCCGCAGTGGAAAACCCATCAAGCCTGTCAAG GATTTGCTAAAGAAGAACCAAATGGAAAATTGCCAGACATTAGTGGATAAGTTTATGAAA CTGGATTTGGAAGATCCTAACCTGGACTTGAACGTTTTCATGAGCCAGGAAGTGCTGCCT GCTGCCACCAGCATCCTCTGA >chr6_cox_hap1_59|SGP_v1.0_predicted_protein_59|267_AA MKLSHTKVSDWQVLYKTVYSALGLRDACRSLPQSIQLFRDIAQEFSDDLHHIASLIGKVI GFLLSIPRLPSMVEASDFEINGLDFMFLSEEKLHYRSARTKELDALLGDLHCEIRDQETL LMYQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYSRPRYSPQVLGVRIQNGRI GQGFQDRKETMETCEDGNDLVFFYQVSDLIRSGKPIKPVKDLLKKNQMENCQTLVDKFMK LDLEDPNLDLNVFMSQEVLPAATSIL* # Gene 60 (Reverse). 25 exons. 1617 aa. Score = 225.91 Terminal 3179610 3179641 0.62 - 2 0 0.00 7.93 1.48 -10.15 AA 1607:1617 chr6_cox_hap1_60 Internal 3181491 3181581 2.29 - 0 1 1.66 0.11 12.52 -31.85 AA 1577:1607 chr6_cox_hap1_60 Internal 3182875 3183060 1.73 - 0 0 4.00 2.26 12.13 -65.10 AA 1515:1576 chr6_cox_hap1_60 Internal 3183532 3183617 -2.69 - 2 0 2.56 0.71 7.36 -30.10 AA 1486:1514 chr6_cox_hap1_60 Internal 3186810 3186979 13.83 - 1 1 5.66 3.67 16.42 -59.50 AA 1429:1486 chr6_cox_hap1_60 Internal 3187098 3187144 -3.95 - 0 2 4.94 0.19 2.11 -16.45 AA 1414:1429 chr6_cox_hap1_60 Internal 3189819 3190097 4.24 - 0 0 3.89 3.63 16.71 -97.65 AA 1321:1413 chr6_cox_hap1_60 Internal 3190401 3190574 2.12 - 0 0 2.19 1.99 13.76 -60.90 AA 1263:1320 chr6_cox_hap1_60 Internal 3192822 3193147 12.83 - 2 0 1.62 5.13 26.10 -114.10 AA 1154:1262 chr6_cox_hap1_60 Internal 3193280 3193391 9.82 - 0 1 0.21 3.95 16.39 -39.20 AA 1117:1154 chr6_cox_hap1_60 Internal 3193463 3193669 5.65 - 0 0 3.30 3.97 14.52 -72.45 AA 1048:1116 chr6_cox_hap1_60 Internal 3193853 3194008 14.60 - 0 0 2.84 0.84 22.55 -54.60 AA 996:1047 chr6_cox_hap1_60 Internal 3194296 3194423 7.97 - 2 0 4.38 1.52 13.90 -44.80 AA 953:995 chr6_cox_hap1_60 Internal 3194560 3194638 -2.69 - 0 1 1.43 4.48 3.73 -27.65 AA 927:953 chr6_cox_hap1_60 Internal 3194725 3194793 7.79 - 0 0 2.74 3.26 10.79 -24.15 AA 904:926 chr6_cox_hap1_60 Internal 3194874 3194978 11.75 - 0 0 1.41 3.06 17.12 -36.75 AA 869:903 chr6_cox_hap1_60 Internal 3196576 3196700 3.48 - 2 0 2.33 -0.30 14.75 -43.75 AA 827:868 chr6_cox_hap1_60 Internal 3196951 3197041 8.17 - 0 1 1.66 4.50 11.96 -31.85 AA 797:827 chr6_cox_hap1_60 Internal 3198070 3198164 2.93 - 2 0 1.47 1.65 11.69 -33.25 AA 765:796 chr6_cox_hap1_60 Internal 3198250 3198358 10.65 - 0 1 2.80 3.08 14.94 -38.15 AA 729:765 chr6_cox_hap1_60 Internal 3198451 3198570 6.53 - 0 0 2.06 3.68 12.63 -42.00 AA 689:728 chr6_cox_hap1_60 Internal 3206245 3206343 4.44 - 0 0 4.21 0.05 11.73 -34.65 AA 656:688 chr6_cox_hap1_60 Internal 3211842 3211901 0.73 - 0 0 2.93 3.03 5.61 -21.00 AA 636:655 chr6_cox_hap1_60 Internal 3212329 3212359 -2.16 - 1 0 3.56 3.00 1.43 -10.85 AA 625:635 chr6_cox_hap1_60 First 3223964 3225837 105.24 - 0 2 2.38 2.42 170.43 -655.90 AA 1:625 chr6_cox_hap1_60 >chr6_cox_hap1_60|SGP_v1.0_predicted_cDNA_60|4851_NN ATGGCTACTGCCAAGGGAATCGCCATAGGCATCGACCTGGGCACCACCTACTCCTGTGTG GGGGTGTTCCAGCACGGCAAGGTGGAGATCATCGCCAACGACCAGGGCAACCGCACCACC CCCAGCTACGTGGCCTTCACAGACACCGAGCGGCTCATTGGGGATGCGGCCAAGAACCAG GTAGCAATGAATCCCCAGAACACTGTTTTTGATGCTAAACGTCTGATCGGCAGGAAATTT AATGATCCTGTTGTACAAGCAGATATGAAACTTTGGCCTTTTCAAGTGATTAATGAAGGA GGCAAGCCCAAAGTCCTTGTGTCCTACAAAGGGGAGAATAAAGCTTTCTACCCTGAGGAA ATCTCTTCGATGGTATTGACTAAGTTGAAGGAGACTGCTGAGGCCTTTTTGGGCCACCCT GTCACCAATGCAGTGATTACCGTGCCAGCCTATTTCAATGACTCTCAACGTCAGGCTACT AAGGATGCAGGTGTGATTGCTGGACTTAATGTGCTAAGAATCATCAATGAGCCCACGGCT GCTGCCATTGCCTATGGTTTAGATAAAGGAGGTCAAGGAGAACGACATGTCCTGATTTTT GATCTGGGTGGAGGCACATTTGATGTGTCAATTCTGACCATAGATGATGGGATTTTTGAG GTAAAGGCCACTGCTGGGGACACTCACCTGGGTGGGGAGGACTTTGACAACAGGCTTGTG AGCCACTTCGTGGAGGAGTTCAAGAGGAAACACAAAAAGGACATCAGCCAGAACAAGCGA GCCGTGAGGCGGCTGCGCACCGCCTGCGAGAGGGCCAAGAGGACCCTGTCGTCCAGCACC CAGGCCAACCTAGAAATTGATTCACTTTATGAAGGCATTGACTTCTATACATCCATCACC AGAGCTCGATTTGAAGAGTTGTGTGCAGACCTGTTTAGGGGTACCCTGGAGCCTGTAGAA AAAGCGCTTCGGGATGCCAAGATGGATAAGGCTAAAATCCATGACATTGTTTTAGTAGGG GGCTCCACCCGCATCCCCAAGGTGCAGCGGCTGCTTCAGGACTACTTCAATGGACGTGAT CTCAACAAGAGCATCAACCCTGATGAGGCCGTAGCATATGGGGCTGCGGTACAAGCAGCC ATCCTGATGGGGGACAAGTCTGAGAAGGTACAGGACCTGCTGCTGCTGGACGTGGCTCCC CTGTCCCTGGGGCTGGAGACGGCTGGGGGCGTGATGACTGCCCTGATAAAGCGCAACTCC ACCATCCCCACCAAGCAGACACAGATTTTCACCACCTACTCTGACAACCAACCCGGGGTG CTGATCCAGGTGTATGAGGGCGAGAGGGCCATGACAAAGGACAACAACCTGCTGGGGCGG TTTGACCTGACTGGAATCCCTCCAGCACCCAGGGGAGTTCCTCAGATCGAGGTGACGTTT GACATTGATGCCAATGGTATTCTCAATGTCACAGCCATGGACAAGAGCACCGGCAAGGTG AACAAGATCACCATCACCAATGACAAGGGCCGCCTGAGCAAGGAGGAGATTGAGCGCATG GTTCTGGATGCTGAGAAATATAAAGCTGAAGATGAGGTCCAGAGGGAGAAAATTGCTGCA AAGAATGCCTTAGAATCCTATGCTTTTAACATGAAGAGTGTTGTGAGTGATGAAGGTTTG AAGGGCAAGATTAGTGAGTCTGATAAAAATAAAATATTGGATAAATGCAACGAGCTCCTT TCGTGGCTGGAGGTCAATCAACTGGCAGAGAAAGATGAGTTTGATCATAAGAGAAAGGAA TTGGAGCAGATGTGTAACCCTATCATCACAAAACTCTACCAAGGAGGATGCACTGGGCCT GCCTGCGGAACAGGCATCTGTGGAACCCTCCATTCTGTGGATCAGTATCTCAACATCAAA CTAACTGACATCAGTGTCACAGACCCTGAGAAATACCCTCACATGACAGCTGCTCAGCTC AAGAAAGAGGCAAAGAAACGGGAGAAGCTAGAGAAATTCCAACAGAAGCAGAAGATCCAA CAGCAGCAGCCACCTCCAGGGGAGAAACTCTCAGCAGCTGTGACAGAGGCCTTTGTCCGG CTTCACGAGGAAGGCATCATCTATCGCAGTACCCGCCTTGTTAACTGGTCCTGCACCCTC AACTCCGCCATCTCTGACATTGAGGTGGATAAGAAGGAGCTGACAGGTCGCACCCTGCTC TCCGTGCCTGGCTACAAGGAGAAGGTGGAGTTCGGGGTCCTCGTGTCCTTTGCCTATAAG GTCCAAGGCTCAGATAGCGACGAGGAGGTGGTGGTGGCAACAACTCGGATCGAGACAATG CTGGGAGATGTGGCTGTAGCTGTGCACCCCAAAGATACCAGATACCAGCACCTGAAGGGG AAGAACGTGATCCACCCATTCCTGTCTCGGAGCCTTCCCATTGTCTTCGATGAATTTGTG GACATGGACTTTGGCACAGGTGCTGTGAAGATCACCCCCGCACATGACCAAAATGACTAT GAAGTTGGGCAGCGGCACGGGCTGGAGGCCATCAGCATCATGGACTCCCGGGGGGCCCTC ATCAATGTGCCTCCGCCTTTCCTGGTCTACCTCCATGCCATCGTGCGAGATGCTCACGGC CGGAAGATGAGCAAGTCTCTAGGCAATGTCATCGATCCCCTGGACGTCATCTATGGAATC TCCCTGCAGGGCCTCCACAACCAGCTGCTGAACAGCAACCTGGATCCCAGCGAGGTGGAG AAGGCCAAAGAAGGGCAGAAAGCTGACTTCCCAGCGGGGATTCCTGAATGTGGCACCGAT GCTCTCCGGTTTGGATTATGTGCCTACATGTCCCAGGGTCGTGACATCAACCTGGATGTG AACCGGATACTGGGTTACCGCCACTTCTGCAACAAGCTCTGGAATGCCACCAAGTTTGCC CTTCGTGGCCTTGGGAAGGGTTTTGTGCCCTCACCCACCTCCCAGCCCGGAGGCCATGAG AGCCTGGTGGACCGCTGGATCCGCAGCCGCCTGACAGAGGCTGTGAGGCTCAGCAATCAA GGCTTCCAGGCCTACGACTTCCCGGCCGTCACCACTGCCCAGTACAGCTTCTGGCTCTAT GAGCTCTGTGATGTCTACTTGGAGTGCCTGAAACCTGTACTGAATGGGGTGGACCAGGTG GCAGCTGAGTGTGCCCGCCAGACCCTGTACACTTGCCTGGACGTTGGCCTGCGGCTGCTC TCACCCTTCATGCCCTTCGTGACGGAGGAGCTGTTCCAGAGGCTGCCCCGGAGGATGCCG CAAGCTCCCCCTAGCCTCTGTGTTACCCCCTACCCGGAGCCCTCAGAGTGCTCCTGGAAG GACCCCGAGGCAGAAGCCGCCCTTGAGCTGGCGCTAAGCATCACGCGAGCCGTGCGCTCC CTGCGGGCCGACTACAACCTCACCCGGATCCGGCCTGACTGTTTCCTGGAAGTGGCGGAT GAGGCCACGGGCGCCCTGGCATCGGCGGTGTCGGGCTACGTGCAGGCCCTGGCCAGCGCA GGTGTGGTGGCTGTTCTGGCCCTGGGGGCTCCCGCCCCCCAGGGTTGCGCTGTGGCTCTG GCTTCTGATCGCTGCTCCATCCACCTGCAGCTTCAGGGGCTGGTGGACCCTGCACGGGAG CTGGGCAAGCTGCAAGCCAAGCGAGTTGAGGCCCAGCGGCAGGCCCAGCGTCTGCGGGAA CGCCGTGCTGCCTCGGGCTATCCTGTCAAGGTGCCGCTCGAAGTCCAGGAGGCAGATGAA GCCAAGCTGTTGCTGCCCCCCACATCTGCCTTCTTCCCCAACATCTGGAGCCTGCTGGCT GCCCCTGGCTCCATCACCCACCAAGACCTAACTGAGGAGGCAGCGCTCAACGTCACCCTG CAGCTCTTCCTGGAGCAGCCACCCCCAGGCCGCCCCCCTCTTCGTCTTGAGGACTTCCTG GGTCGAACACTCCTTGCTGATGACCTCTTTGCCGCCTACTTTGGACCTGGTTCTTCTCGG CGGTTCCGAGCAGCCTTAGGTGAGGTGTCTCGTGCCAATGCAGCCCAGGACTTCCTGCCA ACTTCCAGGAATGACCCCGACCTGCACTTTGATGCTGAGCGACTGGGTCAGGGACGCGCG CGCCTGGTAGGGGCTCTGCGGGAGACCGTGGTGGCAGCCAGGGCCCTTGACCACACCCTG GCTCGCCAGCGCCTCGGGGCTGCACTTCATGCCCTGCAGGCCTTCAGCCTTCTGCGAAGC CGCCTGGGAGACAGGGATTTCTCCAGGCTGCTGGACATCACCCCAGCCTCCAGCCTGAGC TTTGTCCTGGACACCACGGGCAGCATGGGTGAGGAGATCAACGCTGCCAAAATCCAGGCT CGCCACCTTGTGGAGCAGCGGAGAGGCAGCCCCATGGAGCCTGTCCACTATGTCCTGGTG CCTTTTCATGACCCAGATATCTTTGTCTTCACGGATGCCTCCCCCAAGGATGCCTTTCTC ACCAACCAGGTGGAATCCCTGACTCAGGAGCGGCGCTGCCGGGTAACATTCCTGGTGACT GAAGATACATCAAGGGTTCAGGGTCGAGCTCGGCGTGAGATCTTGTCCCCTCTGCGTTTT GAGCCATACAAAGCAGTGGCCCTGGCCTCAGGAGGAGAGGTGATCTTCACCAAAGACCAG CACATTCGAGACGTGGCAGCCATTGTTGGGGAGAGCATGGCTGCCCTGCCACTTGTGTTC AGCGTGGATGGGCTGCTCCAGAAGATCACAGTCCGGATCCACGGAGACATCAGCAGCTTC TGGATCAAGAACCCTGCAGGACCGGCACACCACCCCTACCGGCTCATCTGA >chr6_cox_hap1_60|SGP_v1.0_predicted_protein_60|1617_AA MATAKGIAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ VAMNPQNTVFDAKRLIGRKFNDPVVQADMKLWPFQVINEGGKPKVLVSYKGENKAFYPEE ISSMVLTKLKETAEAFLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTA AAIAYGLDKGGQGERHVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLV SHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSIT RARFEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRD LNKSINPDEAVAYGAAVQAAILMGDKSEKVQDLLLLDVAPLSLGLETAGGVMTALIKRNS TIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFDLTGIPPAPRGVPQIEVTF DIDANGILNVTAMDKSTGKVNKITITNDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAA KNALESYAFNMKSVVSDEGLKGKISESDKNKILDKCNELLSWLEVNQLAEKDEFDHKRKE LEQMCNPIITKLYQGGCTGPACGTGICGTLHSVDQYLNIKLTDISVTDPEKYPHMTAAQL KKEAKKREKLEKFQQKQKIQQQQPPPGEKLSAAVTEAFVRLHEEGIIYRSTRLVNWSCTL NSAISDIEVDKKELTGRTLLSVPGYKEKVEFGVLVSFAYKVQGSDSDEEVVVATTRIETM LGDVAVAVHPKDTRYQHLKGKNVIHPFLSRSLPIVFDEFVDMDFGTGAVKITPAHDQNDY EVGQRHGLEAISIMDSRGALINVPPPFLVYLHAIVRDAHGRKMSKSLGNVIDPLDVIYGI SLQGLHNQLLNSNLDPSEVEKAKEGQKADFPAGIPECGTDALRFGLCAYMSQGRDINLDV NRILGYRHFCNKLWNATKFALRGLGKGFVPSPTSQPGGHESLVDRWIRSRLTEAVRLSNQ GFQAYDFPAVTTAQYSFWLYELCDVYLECLKPVLNGVDQVAAECARQTLYTCLDVGLRLL SPFMPFVTEELFQRLPRRMPQAPPSLCVTPYPEPSECSWKDPEAEAALELALSITRAVRS LRADYNLTRIRPDCFLEVADEATGALASAVSGYVQALASAGVVAVLALGAPAPQGCAVAL ASDRCSIHLQLQGLVDPARELGKLQAKRVEAQRQAQRLRERRAASGYPVKVPLEVQEADE AKLLLPPTSAFFPNIWSLLAAPGSITHQDLTEEAALNVTLQLFLEQPPPGRPPLRLEDFL GRTLLADDLFAAYFGPGSSRRFRAALGEVSRANAAQDFLPTSRNDPDLHFDAERLGQGRA RLVGALRETVVAARALDHTLARQRLGAALHALQAFSLLRSRLGDRDFSRLLDITPASSLS FVLDTTGSMGEEINAAKIQARHLVEQRRGSPMEPVHYVLVPFHDPDIFVFTDASPKDAFL TNQVESLTQERRCRVTFLVTEDTSRVQGRARREILSPLRFEPYKAVALASGGEVIFTKDQ HIRDVAAIVGESMAALPLVFSVDGLLQKITVRIHGDISSFWIKNPAGPAHHPYRLI* # Gene 61 (Forward). 1 exons. 642 aa. Score = 376.96 Single 3229621 3231546 376.96 + 0 0 3.10 0.00 373.31 -673.05 AA 1:642 chr6_cox_hap1_61 >chr6_cox_hap1_61|SGP_v1.0_predicted_cDNA_61|1926_NN ATGGCCAAAGCCGCGGCGATCGGCATCGACCTGGGCACCACCTACTCCTGCGTGGGGGTG TTCCAACACGGCAAGGTGGAGATCATCGCCAACGACCAGGGCAACCGCACCACCCCCAGC TACGTGGCCTTCACGGACACCGAGCGGCTCATCGGGGATGCGGCCAAGAACCAGGTGGCG CTGAACCCGCAGAACACCGTGTTTGACGCGAAGCGGCTGATCGGCCGCAAGTTCGGCGAC CCGGTGGTGCAGTCGGACATGAAGCACTGGCCTTTCCAGGTGATCAACGACGGAGACAAG CCCAAGGTGCAGGTGAGCTACAAGGGGGAGACCAAGGCATTCTACCCCGAGGAGATCTCG TCCATGGTGCTGACCAAGATGAAGGAGATCGCCGAGGCGTACCTGGGCTACCCGGTGACC AACGCGGTGATCACCGTGCCGGCCTACTTCAACGACTCGCAGCGCCAGGCCACCAAGGAT GCGGGTGTGATCGCGGGGCTCAACGTGCTGCGGATCATCAACGAGCCCACGGCCGCCGCC ATCGCCTACGGCCTGGACAGAACGGGCAAGGGGGAGCGCAACGTGCTCATCTTTGACCTG GGCGGGGGCACCTTCGACGTGTCCATCCTGACGATCGACGACGGCATCTTCGAGGTGAAG GCCACGGCCGGGGACACCCACCTGGGTGGGGAGGACTTTGACAACAGGCTGGTGAACCAC TTCGTGGAGGAGTTCAAGAGAAAACACAAGAAGGACATCAGCCAGAACAAGCGAGCCGTG AGGCGGCTGCGCACCGCCTGCGAGAGGGCCAAGAGGACCCTGTCGTCCAGCACCCAGGCC AGCCTGGAGATCGACTCCCTGTTTGAGGGCATCGACTTCTACACGTCCATCACCAGGGCG AGGTTCGAGGAGCTGTGCTCCGACCTGTTCCGAAGCACCCTGGAGCCCGTGGAGAAGGCT CTGCGCGACGCCAAGCTGGACAAGGCCCAGATTCACGACCTGGTCCTGGTCGGGGGCTCC ACCCGCATCCCCAAGGTGCAGAAGCTGCTGCAGGACTTCTTCAACGGGCGCGACCTGAAC AAGAGCATCAACCCCGACGAGGCTGTGGCCTACGGGGCGGCGGTGCAGGCGGCCATCCTG ATGGGGGACAAGTCCGAGAACGTGCAGGACCTGCTGCTGCTGGACGTGGCTCCCCTGTCG CTGGGGCTGGAGACGGCCGGAGGCGTGATGACTGCCCTGATCAAGCGCAACTCCACCATC CCCACCAAGCAGACGCAGATCTTCACCACCTACTCCGACAACCAACCCGGGGTGCTGATC CAGGTGTACGAGGGCGAGAGGGCCATGACGAAAGACAACAATCTGTTGGGGCGCTTCGAG CTGAGCGGCATCCCTCCGGCCCCCAGGGGCGTGCCCCAGATCGAGGTGACCTTCGACATC GATGCCAACGGCATCCTGAACGTCACGGCCACGGACAAGAGCACCGGCAAGGCCAACAAG ATCACCATCACCAACGACAAGGGCCGCCTGAGCAAGGAGGAGATCGAGCGCATGGTGCAG GAGGCGGAGAAGTACAAAGCGGAGGACGAGGTGCAGCGCGAGAGGGTGTCAGCCAAGAAC GCCCTGGAGTCCTACGCCTTCAACATGAAGAGCGCCGTGGAGGATGAGGGGCTCAAGGGC AAGATCAGCGAGGCCGACAAGAAGAAGGTGCTGGACAAGTGTCAAGAGGTCATCTCGTGG CTGGACGCCAACACCTTGGCCGAGAAGGACGAGTTTGAGCACAAGAGGAAGGAGCTGGAG CAGGTGTGTAACCCCATCATCAGCGGACTGTACCAGGGTGCCGGTGGTCCCGGGCCTGGG GGCTTCGGGGCTCAGGGTCCCAAGGGAGGGTCTGGGTCAGGCCCCACCATTGAGGAGGTA GATTAG >chr6_cox_hap1_61|SGP_v1.0_predicted_protein_61|642_AA MAKAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEIS SMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAA IAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNH FVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRA RFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLN KSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTI PTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFELSGIPPAPRGVPQIEVTFDI DANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRERVSAKN ALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELE QVCNPIISGLYQGAGGPGPGGFGAQGPKGGSGSGPTIEEVD* # Gene 62 (Forward). 1 exons. 642 aa. Score = 376.48 Single 3241817 3243742 376.48 + 0 0 3.10 0.00 372.96 -673.05 AA 1:642 chr6_cox_hap1_62 >chr6_cox_hap1_62|SGP_v1.0_predicted_cDNA_62|1926_NN ATGGCCAAAGCCGCGGCGATCGGCATCGACCTGGGCACCACCTACTCCTGCGTGGGGGTG TTCCAACACGGCAAGGTGGAGATCATCGCCAACGACCAGGGCAACCGCACCACCCCCAGC TACGTGGCCTTCACGGACACCGAGCGGCTCATCGGGGATGCGGCCAAGAACCAGGTGGCG CTGAACCCGCAGAACACCGTGTTTGACGCGAAGCGGCTGATCGGCCGCAAGTTCGGCGAC CCGGTGGTGCAGTCGGACATGAAGCACTGGCCTTTCCAGGTGATCAACGACGGAGACAAG CCCAAGGTGCAGGTGAGCTACAAGGGGGAGACCAAGGCATTCTACCCCGAGGAGATCTCG TCCATGGTGCTGACCAAGATGAAGGAGATCGCCGAGGCGTACCTGGGCTACCCGGTGACC AACGCGGTGATCACCGTGCCGGCCTACTTCAACGACTCGCAGCGCCAGGCCACCAAGGAT GCGGGTGTGATCGCGGGGCTCAACGTGCTGCGGATCATCAACGAGCCCACGGCCGCCGCC ATCGCCTACGGCCTGGACAGAACGGGCAAGGGGGAGCGCAACGTGCTCATCTTTGACCTG GGCGGGGGCACCTTCGACGTGTCCATCCTGACGATCGACGACGGCATCTTCGAGGTGAAG GCCACGGCCGGGGACACCCACCTGGGTGGGGAGGACTTTGACAACAGGCTGGTGAACCAC TTCGTGGAGGAGTTCAAGAGAAAACACAAGAAGGACATCAGCCAGAACAAGCGAGCCGTG AGGCGGCTGCGCACCGCCTGCGAGAGGGCCAAGAGGACCCTGTCGTCCAGCACCCAGGCC AGCCTGGAGATCGACTCCCTGTTTGAGGGCATCGACTTCTACACGTCCATCACCAGGGCG AGGTTCGAGGAGCTGTGCTCCGACCTGTTCCGAAGCACCCTGGAGCCCGTGGAGAAGGCT CTGCGCGACGCCAAGCTGGACAAGGCCCAGATTCACGACCTGGTCCTGGTCGGGGGCTCC ACCCGCATCCCCAAGGTGCAGAAGCTGCTGCAGGACTTCTTCAACGGGCGCGACCTGAAC AAGAGCATCAACCCCGACGAGGCTGTGGCCTACGGGGCGGCGGTGCAGGCGGCCATCCTG ATGGGGGACAAGTCCGAGAACGTGCAGGACCTGCTGCTGCTGGACGTGGCTCCCCTGTCG CTGGGGCTGGAGACGGCCGGAGGCGTGATGACTGCCCTGATCAAGCGCAACTCCACCATC CCCACCAAGCAGACGCAGATCTTCACCACCTACTCCGACAACCAACCCGGGGTGCTGATC CAGGTGTACGAGGGCGAGAGGGCCATGACGAAAGACAACAATCTGTTGGGGCGCTTCGAG CTGAGCGGCATCCCTCCGGCCCCCAGGGGCGTGCCCCAGATCGAGGTGACCTTCGACATC GATGCCAACGGCATCCTGAACGTCACGGCCACGGACAAGAGCACCGGCAAGGCCAACAAG ATCACCATCACCAACGACAAGGGCCGCCTGAGCAAGGAGGAGATCGAGCGCATGGTGCAG GAGGCGGAGAAGTACAAAGCGGAGGACGAGGTGCAGCGCGAGAGGGTGTCAGCCAAGAAC GCCCTGGAGTCCTACGCCTTCAACATGAAGAGCGCCGTGGAGGATGAGGGGCTCAAGGGC AAGATCAGCGAGGCGGACAAGAAGAAGGTTCTGGACAAGTGTCAAGAGGTCATCTCGTGG CTGGACGCCAACACCTTGGCCGAGAAGGACGAGTTTGAGCACAAGAGGAAGGAGCTGGAG CAGGTGTGTAACCCCATCATCAGCGGACTGTACCAGGGTGCCGGTGGTCCCGGGCCTGGC GGCTTCGGGGCTCAGGGTCCCAAGGGAGGGTCTGGGTCAGGCCCTACCATTGAGGAGGTG GATTAG >chr6_cox_hap1_62|SGP_v1.0_predicted_protein_62|642_AA MAKAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEIS SMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAA IAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNH FVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRA RFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLN KSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTI PTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFELSGIPPAPRGVPQIEVTFDI DANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRERVSAKN ALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELE QVCNPIISGLYQGAGGPGPGGFGAQGPKGGSGSGPTIEEVD* # Gene 63 (Reverse). 4 exons. 217 aa. Score = 22.83 Terminal 3273750 3273976 1.71 - 2 0 0.00 4.79 15.58 -78.40 AA 142:217 chr6_cox_hap1_63 Internal 3274073 3274295 14.62 - 0 1 2.93 3.67 22.94 -78.05 AA 68:142 chr6_cox_hap1_63 Internal 3274470 3274652 6.43 - 0 0 1.36 3.19 16.94 -64.05 AA 7: 67 chr6_cox_hap1_63 First 3276187 3276204 0.07 - 0 0 3.61 2.25 2.12 -6.30 AA 1: 6 chr6_cox_hap1_63 >chr6_cox_hap1_63|SGP_v1.0_predicted_cDNA_63|651_NN ATGGAGCAACTGCTGTGGAAACAGCGGGAGCCACGGAAGGGCCGCCTCATCGTGTGTGGC CATGGGACGCTGGAGCGGGACGGAGTCTTCTGTCTCCTCAGCGATGATCATGGTGCCTCC TGGCGCTACGGAAGTGGGGTCAGCGGCATCCCCTACGGTCAGCCCAAGCAGGAAAATGAT TTCAATCCTGATGAATGCCAGCCCTATGAGCTCCCAGATGGCTCAGTCGTCATCAATGCC CGAAACCAGAACAACTACCACTGCCACTGCCGAATTGTCCTCCGCAGCTATGATGCCTGT GATACACTAAGGCCCCGTGATGTGACCTTCGACCCTGAGCTCGTGGACCCTGTGGTAGCT GCAGGAGCTGTAGTCACCAGCTCCGGCATTGTCTTCTTCTCCAACCCAGCACATCCAGAG TTCCGAGTGAACCTGACCCTGCGATGGAGCTTCAGCAATGGTACCTCATGGCGGAAAGAG ACAGTCCAGCTATGGCCAGGCCCCAGTGGCTATTCATCCCTGGCAACCCTGGAGGGCAGC ATGGATGGAGAGGAGCAGGCCCCCCAGCTCTACGTCCTGTATGAGAAAGGCCGGAACCAC TACACAGAGAGCATCTCCGTGGCCAAAATCAGTGTCTATGGGACACTCTGA >chr6_cox_hap1_63|SGP_v1.0_predicted_protein_63|217_AA MEQLLWKQREPRKGRLIVCGHGTLERDGVFCLLSDDHGASWRYGSGVSGIPYGQPKQEND FNPDECQPYELPDGSVVINARNQNNYHCHCRIVLRSYDACDTLRPRDVTFDPELVDPVVA AGAVVTSSGIVFFSNPAHPEFRVNLTLRWSFSNGTSWRKETVQLWPGPSGYSSLATLEGS MDGEEQAPQLYVLYEKGRNHYTESISVAKISVYGTL* # Gene 64 (Reverse). 10 exons. 325 aa. Score = 71.85 Terminal 3277658 3277779 17.56 - 2 0 0.00 0.11 26.85 -41.65 AA 285:325 chr6_cox_hap1_64 Internal 3279041 3279111 8.42 - 1 1 3.49 2.50 11.36 -24.85 AA 261:285 chr6_cox_hap1_64 Internal 3279346 3279419 4.93 - 0 2 1.27 4.09 9.65 -25.90 AA 237:261 chr6_cox_hap1_64 Internal 3279529 3279632 0.73 - 2 0 2.15 2.03 9.35 -36.40 AA 202:236 chr6_cox_hap1_64 Internal 3279721 3279815 -2.08 - 1 1 4.73 0.21 6.03 -33.25 AA 170:202 chr6_cox_hap1_64 Internal 3284641 3284740 12.35 - 2 2 -1.47 3.50 20.01 -35.00 AA 137:170 chr6_cox_hap1_64 Internal 3284850 3285085 15.95 - 1 1 1.84 3.12 26.00 -82.60 AA 58:137 chr6_cox_hap1_64 Internal 3285352 3285435 2.92 - 1 2 1.32 3.85 8.88 -29.40 AA 30: 58 chr6_cox_hap1_64 Internal 3291072 3291120 5.03 - 2 2 3.60 4.20 5.82 -17.15 AA 14: 30 chr6_cox_hap1_64 First 3292979 3293018 6.03 - 0 1 3.32 1.93 8.20 -14.00 AA 1: 14 chr6_cox_hap1_64 >chr6_cox_hap1_64|SGP_v1.0_predicted_cDNA_64|975_NN ATGGGGGGAAAGCAGCGGGACGAGGATGACGAGGCCTACGGGAAGCCAGTCAAATACGAC CCCTCCTTTCGAGGCCCCATCAAGAACAGCGGTCTTATTGACAGCCTCAATGCCCGAGAC ATCAGTGTTAAGATCTTTGAAGATTTTGCCCAGTCCTGGTATTGGATTCTTGTTGCCCTG GGGGTGGCTCTGGTCTTGAGCCTACTGTTTATCTTGCTTCTGCGCCTGGTGGCTGGGCCC CTGGTGCTGGTGCTGATCCTGGGAGTGCTGGGCGTGCTGGCATACGGCATCTACTACTGC TGGGAGGAGTACCGAGTGCTGCGGGACAAGGGCGCCTCCATCTCCCAGCTGGGTTTCACC ACCAACCTCAGTGCCTACCAGAGCGTGCAGGAGACCTGGCTGGCCGCCCTGATCGTGTTG GCGGTGCTTGAAGCCATCCTGCTGCTGATGCTCATCTTCCTGCGGCAGCGGATTCGTATT GCCATCGCCCTCCTGAAGGAGGCCAGCAATTACCACACTGGGTCATTGGCATTTGGAGCC CTCATCCTGACCCTTGTGCAGATAGCCCGGGTCATCTTGGAGTATATTGACCACAAGCTC AGAGGAGTGCAGAACCCTGTAGCCCGCTGCATCATGTGCTGTTTCAAGTGCTGCCTCTGG TGTCTGGAAAAATTTATCAAGTTCCTAAACCGCAATGCATACATCATGATCGCCATCTAC GGGAAGAATTTCTGTGTCTCAGCCAAAAATGCGTTCATGCTACTCATGCGAAACATTGTC AGGGTGGTCGTCCTGGACAAAGTCACAGACCTGCTGCTGTTCTTTGGGAAGCTGCTGGTG GTCGGAGGCGTGGTGGAAGACCTGGAGCGGAACAACGGCTCCCTGGACCGGCCCTACTAC ATGTCCAAGAGCCTTCTAAAGATTCTGGGCAAGAAGAACGAGGCGCCCCCGGACAACAAG AAGAGGAAGAAGTGA >chr6_cox_hap1_64|SGP_v1.0_predicted_protein_64|325_AA MGGKQRDEDDEAYGKPVKYDPSFRGPIKNSGLIDSLNARDISVKIFEDFAQSWYWILVAL GVALVLSLLFILLLRLVAGPLVLVLILGVLGVLAYGIYYCWEEYRVLRDKGASISQLGFT TNLSAYQSVQETWLAALIVLAVLEAILLLMLIFLRQRIRIAIALLKEASNYHTGSLAFGA LILTLVQIARVILEYIDHKLRGVQNPVARCIMCCFKCCLWCLEKFIKFLNRNAYIMIAIY GKNFCVSAKNAFMLLMRNIVRVVVLDKVTDLLLFFGKLLVVGGVVEDLERNNGSLDRPYY MSKSLLKILGKKNEAPPDNKKRKK* # Gene 65 (Reverse). 20 exons. 776 aa. Score = 182.60 Terminal 3294122 3294302 14.74 - 1 0 0.00 4.62 22.68 -62.30 AA 716:776 chr6_cox_hap1_65 Internal 3294711 3294886 18.63 - 0 2 2.00 1.37 26.79 -61.60 AA 658:716 chr6_cox_hap1_65 Internal 3295052 3295130 7.09 - 1 0 3.89 3.29 9.46 -27.65 AA 631:657 chr6_cox_hap1_65 Internal 3296737 3296823 5.21 - 1 2 2.30 3.71 9.77 -30.45 AA 602:631 chr6_cox_hap1_65 Internal 3296932 3297047 3.77 - 0 2 1.58 3.46 11.21 -40.60 AA 564:602 chr6_cox_hap1_65 Internal 3297400 3297477 5.64 - 0 0 3.24 3.31 9.05 -27.30 AA 538:563 chr6_cox_hap1_65 Internal 3297844 3297988 29.55 - 1 0 5.16 5.02 25.73 -50.75 AA 489:537 chr6_cox_hap1_65 Internal 3298430 3298597 6.00 - 1 2 2.74 4.12 13.34 -58.80 AA 433:489 chr6_cox_hap1_65 Internal 3298683 3298837 13.66 - 0 2 0.27 4.79 20.29 -54.25 AA 382:433 chr6_cox_hap1_65 Internal 3298950 3299054 12.00 - 0 0 2.74 5.47 13.16 -36.75 AA 347:381 chr6_cox_hap1_65 Internal 3300619 3300720 8.04 - 0 0 2.20 4.36 11.96 -35.70 AA 313:346 chr6_cox_hap1_65 Internal 3300813 3300935 8.82 - 0 0 1.18 2.84 16.35 -43.05 AA 272:312 chr6_cox_hap1_65 Internal 3301033 3301139 11.28 - 2 0 1.55 1.49 18.45 -37.45 AA 236:271 chr6_cox_hap1_65 Internal 3301615 3301666 0.72 - 0 1 1.76 1.31 8.05 -18.20 AA 219:236 chr6_cox_hap1_65 Internal 3302401 3302544 9.55 - 0 0 4.68 0.71 16.39 -50.40 AA 171:218 chr6_cox_hap1_65 Internal 3302637 3302785 4.92 - 2 0 2.02 1.56 15.26 -52.15 AA 121:170 chr6_cox_hap1_65 Internal 3303266 3303380 10.85 - 0 1 3.87 4.22 12.94 -40.25 AA 83:121 chr6_cox_hap1_65 Internal 3306445 3306600 8.75 - 0 0 3.69 3.99 14.22 -54.60 AA 31: 82 chr6_cox_hap1_65 Internal 3306732 3306772 1.03 - 2 0 2.90 6.05 1.60 -14.35 AA 17: 30 chr6_cox_hap1_65 First 3310961 3311009 2.35 - 0 1 5.16 1.82 4.03 -17.15 AA 1: 17 chr6_cox_hap1_65 >chr6_cox_hap1_65|SGP_v1.0_predicted_cDNA_65|2328_NN ATGGGGGCGCTGCTGCTGGAGAAGGAAACCAGAGGAGCCACCGAGAGAGATCTGGCCAAA AGGAGGAAGCTGAACTCAGGAGGTGGCCTGTCAGAGGAGTTAGGTTCTGCCCGGCGTTCA GGAGAAGTGACCCTGACGAAAGGGGACCCCGGGTCCCTGGAGGAGTGGGAGACGGTGGTG GGTGATGACTTCAGTCTCTACTATGATTCCTACTCTGTGGATGAGCGCGTGGACTCCGAC AGCAAGAGTGGTTCCAGTGGCCGGCGCAAGGCCAAGAAGAAATGGCGAAAAGACAGCCCA TGGGTGAAGCCGTCTCGGAAACGGCGCAAGCGGGAGCCTCCGCGGGCCAAGGAGCCACGA GGGGTGTCCAATGACACATCTTCGCTGGAGACAGAGCGAGGGTTTGAGGAGTTGCCCCTG TGCAGCTGCCGCATGGAGGCACCCAAGATTGACCGCATCAGCGAGAGGGCGGGGCACAAG TGCATGGCCACTGAGAGTGTGGACGGAGAGCTGTCAGGCTGCAATGCCGCCATCCTCAAG CGGGAGACCATGAGGCCATCCAGCCGTGTGGCCCTGATGGTGCTCTGTGAGACCCACCGC GCCCGCATGGTCAAACACCACTGCTGCCCGGGCTGCGGCTACTTCTGCACGGCGTTGTAC CTGTCCGTGAAGCAGGGCGAGCTGCAGAAGGTGATCCTGATGCTGTTGGACAACCTGGAC CCCAACTTCCAGAGCGACCAGCAGAGCAAGCGCACGCCCCTGCATGCAGCCGCCCAGAAG GGCTCCGTGGAGATCTGCCATGTGCTGCTGCAGGCTGGAGCCAACATAAATGCAGTGGAC AAACAGCAGCGGACGCCACTGATGGAGGCCGTGGTGAACAACCACCTGGAGGTAGCCCGT TACATGGTGCAGCGTGGTGGCTGTGTCTATAGCAAGGAGGAGGACGGTTCCACCTGCCTC CACCACGCAGCCAAAATCGGGAACTTGGAGATGGTCAGCCTGCTGCTGAGCACAGGACAG GTGGACGTCAACGCCCAGGACAGTGGGGGGTGGACGCCCATCATCTGGGCTGCAGAGCAC AAGCACATCGAGGTGATCCGCATGCTACTGACGCGGGGCGCCGACGTCACCCTCACTGAC AACGAGGAGAACATCTGCCTGCACTGGGCCTCCTTCACGGGCAGCGCCGCCATCGCCGAA GTCCTTCTGAATGCGCGCTGTGACCTCCATGCTGTCAACTACCATGGGGACACCCCCCTG CACATCGCAGCTCGGGAGAGCTACCATGACTGCGTGCTGTTATTCCTGTCACGTGGGGCC AACCCTGAGCTGCGGAACAAAGAGGGGGACACAGCATGGGACCTGACTCCCGAGCGCTCC GACGTGTGGTTTGCGCTTCAACTCAACCGCAAGCTCCGACTTGGGGTGGGAAATCGGGCC ATCCGCACAGAGAAGATCATCTGCCGGGACGTGGCTCGGGGCTATGAGAACGTGCCCATT CCCTGTGTCAACGGTGTGGATGGGGAGCCCTGCCCTGAGGATTACAAGTACATCTCAGAG AACTGCGAGACGTCCACCATGAACATCGATCGCAACATCACCCACCTGCAGCACTGCACG TGTGTGGACGACTGCTCTAGCTCCAACTGCCTGTGCGGCCAGCTCAGCATCCGGTGCTGG TATGACAAGGATGGGCGATTGCTCCAGGAATTTAACAAGATTGAGCCTCCGCTGATTTTC GAGTGTAACCAGGCGTGCTCATGCTGGAGAAACTGCAAGAACCGGGTCGTACAGAGTGGC ATCAAGGTGCGGCTACAGCTCTACCGAACAGCCAAGATGGGCTGGGGGGTCCGCGCCCTG CAGACCATCCCACAGGGGACCTTCATCTGCGAGTATGTCGGGGAGCTGATCTCTGATGCT GAGGCTGATGTGAGAGAGGATGATTCTTACCTCTTCGACTTAGACAACAAGGATGGAGAG GTGTACTGCATAGATGCCCGTTACTATGGCAACATCAGCCGCTTCATCAACCACCTGTGT GACCCCAACATCATTCCCGTCCGGGTCTTCATGCTGCACCAAGACCTGCGATTTCCACGC ATCGCCTTCTTCAGTTCCCGAGACATCCGGACTGGGGAGGAGCTAGGGTTTGACTATGGC GACCGCTTCTGGGACATCAAAAGCAAATATTTCACCTGCCAATGTGGCTCTGAGAAGTGC AAGCACTCAGCCGAAGCCATTGCCCTGGAGCAGAGCCGTCTGGCCCGCCTGGACCCACAC CCTGAGCTGCTGCCCGAGCTCGGCTCCCTGCCCCCTGTCAACACATGA >chr6_cox_hap1_65|SGP_v1.0_predicted_protein_65|776_AA MGALLLEKETRGATERDLAKRRKLNSGGGLSEELGSARRSGEVTLTKGDPGSLEEWETVV GDDFSLYYDSYSVDERVDSDSKSGSSGRRKAKKKWRKDSPWVKPSRKRRKREPPRAKEPR GVSNDTSSLETERGFEELPLCSCRMEAPKIDRISERAGHKCMATESVDGELSGCNAAILK RETMRPSSRVALMVLCETHRARMVKHHCCPGCGYFCTALYLSVKQGELQKVILMLLDNLD PNFQSDQQSKRTPLHAAAQKGSVEICHVLLQAGANINAVDKQQRTPLMEAVVNNHLEVAR YMVQRGGCVYSKEEDGSTCLHHAAKIGNLEMVSLLLSTGQVDVNAQDSGGWTPIIWAAEH KHIEVIRMLLTRGADVTLTDNEENICLHWASFTGSAAIAEVLLNARCDLHAVNYHGDTPL HIAARESYHDCVLLFLSRGANPELRNKEGDTAWDLTPERSDVWFALQLNRKLRLGVGNRA IRTEKIICRDVARGYENVPIPCVNGVDGEPCPEDYKYISENCETSTMNIDRNITHLQHCT CVDDCSSSNCLCGQLSIRCWYDKDGRLLQEFNKIEPPLIFECNQACSCWRNCKNRVVQSG IKVRLQLYRTAKMGWGVRALQTIPQGTFICEYVGELISDAEADVREDDSYLFDLDNKDGE VYCIDARYYGNISRFINHLCDPNIIPVRVFMLHQDLRFPRIAFFSSRDIRTGEELGFDYG DRFWDIKSKYFTCQCGSEKCKHSAEAIALEQSRLARLDPHPELLPELGSLPPVNT* # Gene 66 (Reverse). 3 exons. 326 aa. Score = 109.25 Terminal 3313964 3314350 52.08 - 0 0 0.00 -2.89 68.21 -134.40 AA 198:326 chr6_cox_hap1_66 Internal 3314630 3314805 11.79 - 2 0 0.74 0.42 24.25 -61.60 AA 139:197 chr6_cox_hap1_66 First 3314929 3315343 45.38 - 0 1 1.59 0.88 58.18 -145.25 AA 1:139 chr6_cox_hap1_66 >chr6_cox_hap1_66|SGP_v1.0_predicted_cDNA_66|978_NN ATGGCCTCTGGGGTGGAAGTCCTGCGCTTCCAGCTGCCCGGCCACGAGGCCGCAACGCTA CGGAACATGAACCAGCTCCGGGCAGAGGAGCGGTTCTGCGACGTGACCATTGTGGCCGAC AGCCTCAAGTTTCGAGGCCACAAGGTCATCTTGGCCGCCTGCTCACCCTTCCTGCGGGAC CAGTTCCTGCTGAACCCCAGCTCGGAGCTGCAGGTCTCCCTGATGCACAGTGCACGCATC GTGGCCGACTTGCTCCTCTCCTGCTACACGGGCGCCTTGGAATTCGCTGTTAGGGACATC GTCAACTACCTTACAGCCGCCTCCTACCTGCAGATGGAGCACGTGGTGGAGAAATGCCGG AATGCCCTCAGCCAGTTCATTGAGCCCAAAATAGGCCTCAAAGAGGATGGGGTCATGAAG CTGGAGTTCCCACTGGATGAAGACTTGGAGCTGAAAGCCGAGGAAGAGGATGAGGATGAG GATGAGGACGTGTCTGACATCTGCATCGTCAAGGTGGAGTCGGCCCTGGAGGTGGCACAC CGGCTCAAACCCCCTGGAGGCCTGGGAGGGGGTCTGGGCATTGGAGGCTCCAACATCAAG TGCACCAAGTGCCCGGAAGTGTTCCAGGGCGTGGAGAAGCTGGTCTTCCACATGCGGGCG CAGCACTTCATCTTCATGTGCCCTCGCTGTGGCAAGCAGTTCAACCACAGCAGCAACCTC AACCGCCACATGAACGTGCATCGTGGTGTCAAGTCACACTCGTGCGGCATCTGCGGCAAG TGCTTCACACAGAAGTCCACCCTTCACGACCACCTCAACCTGCACTCGGGAGCGCGGCCC TACCGCTGCTCCTACTGCGACGTGCGCTTCGCCCACAAGCCTGCCATTAGGCGGCACCTC AAGGAGCAACACGGCAAGACCACGGCCGAGAACGTGCTGGAGGCCAGTGTGGCCGAGATT AACGTCCTCATCCGCTAG >chr6_cox_hap1_66|SGP_v1.0_predicted_protein_66|326_AA MASGVEVLRFQLPGHEAATLRNMNQLRAEERFCDVTIVADSLKFRGHKVILAACSPFLRD QFLLNPSSELQVSLMHSARIVADLLLSCYTGALEFAVRDIVNYLTAASYLQMEHVVEKCR NALSQFIEPKIGLKEDGVMKLEFPLDEDLELKAEEEDEDEDEDVSDICIVKVESALEVAH RLKPPGGLGGGLGIGGSNIKCTKCPEVFQGVEKLVFHMRAQHFIFMCPRCGKQFNHSSNL NRHMNVHRGVKSHSCGICGKCFTQKSTLHDHLNLHSGARPYRCSYCDVRFAHKPAIRRHL KEQHGKTTAENVLEASVAEINVLIR* # Gene 67 (Forward). 16 exons. 624 aa. Score = 67.22 First 3334802 3334817 -5.27 + 0 1 1.54 1.58 1.51 -5.60 AA 1: 6 chr6_cox_hap1_67 Internal 3347650 3347823 2.72 + 2 1 5.01 2.62 10.39 -60.90 AA 6: 64 chr6_cox_hap1_67 Internal 3349928 3350101 8.94 + 2 1 3.63 3.77 15.54 -60.90 AA 64:122 chr6_cox_hap1_67 Internal 3351359 3351499 2.26 + 2 1 2.35 1.51 13.34 -49.35 AA 122:169 chr6_cox_hap1_67 Internal 3353271 3353360 5.74 + 2 1 6.19 2.69 7.50 -31.50 AA 169:199 chr6_cox_hap1_67 Internal 3356999 3357139 10.80 + 2 1 3.17 4.05 15.13 -49.35 AA 199:246 chr6_cox_hap1_67 Internal 3357265 3357296 -4.21 + 2 0 2.71 -0.46 4.38 -11.20 AA 246:256 chr6_cox_hap1_67 Internal 3357456 3357567 5.18 + 0 1 3.72 3.81 9.28 -39.20 AA 257:294 chr6_cox_hap1_67 Internal 3361047 3361232 6.18 + 2 1 2.17 4.11 14.98 -65.10 AA 294:356 chr6_cox_hap1_67 Internal 3361985 3362121 -1.69 + 2 0 0.15 -0.78 14.86 -47.95 AA 356:401 chr6_cox_hap1_67 Internal 3362414 3362552 2.94 + 0 1 5.08 1.41 10.47 -48.65 AA 402:448 chr6_cox_hap1_67 Internal 3362870 3363001 3.78 + 2 1 5.57 0.14 11.61 -46.20 AA 448:492 chr6_cox_hap1_67 Internal 3363283 3363384 10.94 + 2 1 5.10 4.27 11.34 -35.70 AA 492:526 chr6_cox_hap1_67 Internal 3363460 3363597 12.91 + 2 1 5.99 3.04 14.89 -48.30 AA 526:572 chr6_cox_hap1_67 Internal 3364659 3364812 8.42 + 2 2 2.24 3.67 15.84 -53.90 AA 572:623 chr6_cox_hap1_67 Terminal 3365595 3365598 -2.43 + 1 0 6.36 0.00 0.00 -0.35 AA 623:624 chr6_cox_hap1_67 >chr6_cox_hap1_67|SGP_v1.0_predicted_cDNA_67|1872_NN ATGGCGCCTACAGGAGCTGGCCACTGCCCCAACCCAGGCATTTCACTGGGCGCAGTGCGG ACAGGCTTCCGCTTTGGTCATGGGGACAAGGTCCGCTATCGCTGCTCCTCGAATCTTGTG CTCACGGGGTCTTCGGAGCGGGAGTGCCAGGGCAACGGGGTCTGGAGTGGAACGGAGCCC ATCTGCCGCCGGCCCTTTACGCTGCCTCTCACTTGCCCCGCACAGATCTTCAGCTTTGAG ATCAATGTGAGCGTTGCCATTATCACCTTTGCCTCAGAGCCCAAAGTCCTCATGTCTGTC CTGAACGACAACTCCCGGGATATGACTGAGGTGATCAGCAGCCTGGAAAATGCCAACTAT AAAGATCATGAAAATGGAACTGGGACTAACACCTATGCGGCCTTAAACAGTGTCTATCTC ATGATGAACAACCAAATGCGACTCCTCGGCATGGAAACGATGGCCTGGCAGGAAATCCGA CATGCCATCATCCTTCTGACAGATGGAAAGTCCAATATGGGTGGCTCTCCCAAGACAGCT GTTGACCATATCAGAGAGATCCTGAACATCAACCAGAAGAGGAATGACTATCTGGACATC TATGCCATCGGGGTGGGCAAGCTGGATGTGGACTGGAGAGAACTGAATGAGCTAGGGTCC AAGAAGGATGGTGAGAGGCATGCCTTCATTCTGCAGGACACAAAGGCTCTGCACCAGGTC TTTGAACATATGCTGGATGTCTCCAAGCTCACAGACACCATCTGCGGGCCCAAGAGCCAA GAGACCTGCCGGGGGGCCCTCATCTCCGACCAATGGGTCCTGACAGCAGCTCATTGCTTC CGCGATGGCAACGACCACTCCCTGTGGAGGGTCAATGTGGCAATCCACTGTCCAAGACCA CACGACTTCGAGAACGGGGAATACTGGCCCCGGTCTCCCTACTACAATGTGAGTGATGAG ATCTCTTTCCACTGCTATGACGGTTACACTCTCCGGGGCTCTGCCAATCGCACCTGCCAA GTGAATGGCCGGTGGAGTGGGCAGACAGCGATCTGTGACAACGGAGGGGAACAACAGAAG CGGAAGATCGTCCTGGACCCTTCAGGCTCCATGAACATCTACCTGGTGCTAGATGGATCA GACAGCATTGGGGCCAGCAACTTCACAGGAGCCAAAAAGTGTCTAGTCAACTTAATTGAG AAGGTGGCAAGTTATGGTGTGAAGCCAAGATATGGTCTAGTGACATATGCCACATACCCC AAAATTTGGGTCAAAGTGTCTGAAGCAGACAGCAGTAATGCAGACTGGGTCACGAAGCAG CTCAATGAAATCAATTATGAAGACCACAAGTTGAAGTCAGGGACTAACACCAAGAAGGCC CTCCAGGCAGTGTACAGCATGATGAGCTGGCCAGATGACGTCCCTCCTGAAGGCTGGAAC CGCACCCGCCATGTCATCATCCTCATGACTGATGGATTGCACAACATGGGCGGGGACCCA ATTACTGTCATTGATGAGATCCGGGACTTGCTATACATTGGCAAGGATCGCAAAAACCCA AGGGAGGATTATCTGGATGTCTATGTGTTTGGGGTCGGGCCTTTGGTGAACCAAGTGAAC ATCAATGCTTTGGCTTCCAAGAAAGACAATGAGCAACATGTGTTCAAAGTCAAGGATATG GAAAACCTGGAAGATGTTTTCTACCAAATGATCGGAGGGGAGAAGCGGGACCTGGAGATA GAAGTAGTCCTATTTCACCCCAACTACAACATTAATGGGAAAAAAGAAGCAGGAATTCCT GAATTTTATGACTATGACGTTGCCCTGATCAAGCTCAAGAATAAGCTGAAATATGGCCAG ACTATCAGGTGA >chr6_cox_hap1_67|SGP_v1.0_predicted_protein_67|624_AA MAPTGAGHCPNPGISLGAVRTGFRFGHGDKVRYRCSSNLVLTGSSERECQGNGVWSGTEP ICRRPFTLPLTCPAQIFSFEINVSVAIITFASEPKVLMSVLNDNSRDMTEVISSLENANY KDHENGTGTNTYAALNSVYLMMNNQMRLLGMETMAWQEIRHAIILLTDGKSNMGGSPKTA VDHIREILNINQKRNDYLDIYAIGVGKLDVDWRELNELGSKKDGERHAFILQDTKALHQV FEHMLDVSKLTDTICGPKSQETCRGALISDQWVLTAAHCFRDGNDHSLWRVNVAIHCPRP HDFENGEYWPRSPYYNVSDEISFHCYDGYTLRGSANRTCQVNGRWSGQTAICDNGGEQQK RKIVLDPSGSMNIYLVLDGSDSIGASNFTGAKKCLVNLIEKVASYGVKPRYGLVTYATYP KIWVKVSEADSSNADWVTKQLNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDVPPEGWN RTRHVIILMTDGLHNMGGDPITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQVN INALASKKDNEQHVFKVKDMENLEDVFYQMIGGEKRDLEIEVVLFHPNYNINGKKEAGIP EFYDYDVALIKLKNKLKYGQTIR* # Gene 68 (Reverse). 5 exons. 164 aa. Score = 23.77 Terminal 3366341 3366438 3.61 - 2 0 0.00 5.66 9.74 -33.25 AA 132:164 chr6_cox_hap1_68 Internal 3367769 3367871 8.54 - 0 1 4.86 4.32 9.84 -36.05 AA 98:132 chr6_cox_hap1_68 Internal 3370733 3370878 10.29 - 2 0 3.89 4.82 14.09 -51.10 AA 49: 97 chr6_cox_hap1_68 Internal 3370981 3371050 -0.54 - 0 1 1.64 3.06 6.93 -24.50 AA 26: 49 chr6_cox_hap1_68 First 3372412 3372486 1.87 - 0 0 3.70 -0.38 9.36 -26.25 AA 1: 25 chr6_cox_hap1_68 >chr6_cox_hap1_68|SGP_v1.0_predicted_cDNA_68|492_NN ATGTTGGTGATACCCCCCGGACTGAGCGAGGAAGAGGAGGCTCTGCAGAAGAAATTCAAC AAGCTCAAGAAAAAGAAAAAGGCATTGCTGGCTCTGAAGAAGCAAAGTAGCAGCAGCACA ACCAGCCAAGGTGGTGTCAAACGCTCACTATCAGAGCAGCCTGTCATGGACACAGCCACA GCAACAGAGCAGGCAAAGCAGCTGGTGAAGTCAGGAGCCATCAGTGCCATCAAGGCTGAG ACCAAGAACTCAGGCTTCAAGCGTTCTCGAACCCTTGAGGGGAAGTTAAAGCTCAACGGG ACCCAGGTGGAGTCTGTACAGCTCAAAGTCAACATAGCCCGAAAACAGCCCATGCTGGAT GCCGCTACTGGCAAGTCTGTCTGGGGCTCCCTCGCTGTCCAGAACAGCCCTAAGGGTTGC CACCGGGACAAGAGGACCCAGATTGTCTACAGTGATGACGTCTACAAGGAAAACCTTGTG GATGGCTTCTAG >chr6_cox_hap1_68|SGP_v1.0_predicted_protein_68|164_AA MLVIPPGLSEEEEALQKKFNKLKKKKKALLALKKQSSSSTTSQGGVKRSLSEQPVMDTAT ATEQAKQLVKSGAISAIKAETKNSGFKRSRTLEGKLKLNGTQVESVQLKVNIARKQPMLD AATGKSVWGSLAVQNSPKGCHRDKRTQIVYSDDVYKENLVDGF* # Gene 69 (Forward). 16 exons. 706 aa. Score = 95.86 First 3374711 3374780 1.61 + 0 1 0.41 4.19 7.51 -24.50 AA 1: 24 chr6_cox_hap1_69 Internal 3376025 3376094 -0.51 + 2 2 3.12 2.43 5.65 -24.50 AA 24: 47 chr6_cox_hap1_69 Internal 3376479 3376625 19.68 + 1 2 2.86 3.92 22.39 -51.45 AA 47: 96 chr6_cox_hap1_69 Internal 3376754 3376838 15.96 + 1 0 4.28 4.60 14.35 -29.75 AA 96:124 chr6_cox_hap1_69 Internal 3377025 3377131 -1.00 + 0 2 3.61 2.76 5.81 -37.45 AA 125:160 chr6_cox_hap1_69 Internal 3377453 3377599 6.07 + 1 2 6.18 2.64 10.20 -51.45 AA 160:209 chr6_cox_hap1_69 Internal 3377677 3377773 2.87 + 1 0 3.59 3.89 6.92 -33.95 AA 209:241 chr6_cox_hap1_69 Internal 3378272 3378382 3.56 + 0 0 1.44 0.42 14.31 -38.85 AA 242:278 chr6_cox_hap1_69 Internal 3379823 3380053 8.95 + 0 0 5.80 3.04 16.72 -80.85 AA 279:355 chr6_cox_hap1_69 Internal 3380749 3380886 7.82 + 0 0 0.25 4.41 15.65 -48.30 AA 356:401 chr6_cox_hap1_69 Internal 3381044 3381181 0.69 + 0 0 0.66 3.85 10.60 -48.30 AA 402:447 chr6_cox_hap1_69 Internal 3381313 3381417 3.47 + 0 0 4.49 3.66 7.01 -36.75 AA 448:482 chr6_cox_hap1_69 Internal 3382726 3382836 8.51 + 0 0 -1.00 2.97 17.80 -38.85 AA 483:519 chr6_cox_hap1_69 Internal 3382911 3383129 7.28 + 0 0 6.09 2.80 14.50 -76.65 AA 520:592 chr6_cox_hap1_69 Internal 3383320 3383460 9.99 + 0 0 6.29 3.71 11.48 -49.35 AA 593:639 chr6_cox_hap1_69 Terminal 3383555 3383755 0.92 + 0 0 4.06 0.00 14.19 -69.30 AA 640:706 chr6_cox_hap1_69 >chr6_cox_hap1_69|SGP_v1.0_predicted_cDNA_69|2118_NN ATGGATGAACCCACCATAACAGATCTGAACACACGGGAGGAGGCTGAGGAGGAGATAGAC TTTGAGAAAGCTCACACATCTGCAGGAAAAACAGTTGTGGCTGAATATGCCATTGCCCTG GCCCAGAAACACATGACACGCACCATCTACACTTCGCCCATCAAGGCCCTGAGCAACCAG AAGTTCCGGGACTTCCGAAACACATTCGGGGATGTGGGGCTGCTCACCGGGGATGTACAG CTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGAGATCCTTCGCTCCATGCTGTAC AGTGGCTCAGATGTTATTCGGGACCTGGAGTGGGTCATCTTTGATGAGGTTCACTATATC AACGATGTCGAGCGTGGGGTCGTGTGGGAGGAGGTGCTTATCATGCTACCTGACCACGTT TCTATCATCCTTCTGAGTGCCACCGTCCCCAACGCCCTTGAGTTTGCTGACTGGATTGGG CGGCTGAAGCGTCGTCAGATCTATGTGATTAGCACTGTAACCCGCCCCGTGCCCCTGGAG CACTATCTTTTCACAGGGAACAGCTCCAAGACCCAGGGGGAGCTCTTTTTGTTGCTGGAC TCCCGAGGAGCCTTCCATACAAAAGGGTACTATGCAGCTGTGGAGGCCAAGAAGGAGAGA ATGAGCAAACACGCCCAGACCTTTGGGGCCAAGCAGCCCACACATCAGGGGGGCCCTGCA CAGGTCCTGCACATGTCAGAGCTCCTGAATCGCGGCCTGGGTGTGCACCATAGCGGCATC CTGCCCATCCTCAAGGAGATCGTGGAGATGCTCTTCAGCCGTGGCCTGGTCAAGGTCTTG TTTGCCACAGAGACCTTTGCCATGGGAGTAAACATGCCTGCTCGTACAGTAGTGTTTGAC TCCATGCGCAAACACGATGGCTCCACCTTCCGGGACCTGCTCCCTGGGGAGTATGTGCAG ATGGCAGGCCGGGCAGGGCGGAGGGGCCTGGACCCCACAGGCACCGTTATCCTGCTCTGC AAGGGCCGAGTGCCCGAGATGGCAGACCTGCACCGCATGATGATGGGGAAGCCGTCCCAG CTGCAGTCCCAGTTCCGCCTCACGTACACTATGATCCTCAACTTGCTGCGAGTGGATGCC CTCAGGGTGGAGGACATGATGAAGAGGAGCTTCTCTGAGTTTCCCTCCCGCAAAGACAGC AAGGCCCATGAACAGGCCCTGGCTGAACTGACCAAGAGGCTGGGAGCTTTGGAGGAGCCT GACATGACTGGCCAACTGGTCGACCTGCCTGAATATTACAGCTGGGGGGAGGAACTGACA GAGACCCAGCACATGATCCAGCGACGCATCATGGAGTCTGTGAACGGGCTGAAGTCTCTC TCAGCAGGAAGGGTGGTGGTTGTGAAGAATCAGGAGCATCACAACGCATTGGGAGTGATC CTACAGTACCTGAAGCTGCGGGAGCGAATGCAGATACAGAAGGAGATGGAGCGGCTGCGC TTCCTACTGTCGGATCAGTCATTGCTGCTGCTTCCTGAGTACCATCAGCGAGTAGAGGTG CTCCGAACCCTGGGTTATGTGGACGAGGCGGGCACTGTGAAGCTGGCAGGGCGGGTGGCT TGTGCCATGAGCAGCCATGAGTTGCTCCTCACTGAGCTCATGTTTGACAATGCACTGAGC ACCCTGCGGCCTGAGGAGATTGCTGCCTTGCTCTCTGGCCTGGTCTGCCAGAGCCCTGGG GACGCTGGGGATCAGCTCCCAAACACCCTCAAGCAGGGAATAGAACGTGTCCGGGCTGTG GCCAAGCGGATTGGTGAGGTCCAGGTGGCTTGTGGCCTGAACCAGACGGTGGAGGAATTT GTGGGGGAGCTGAATTTTGGGCTGGTTGAGGTTGTATATGAGTGGGCCCGGGGCATGCCC TTCTCCGAGTTGGCAGGGCTCTCAGGGACCCCTGAGGGCCTGGTGGTCCGCTGCATTCAG CGCCTGGCTGAGATGTGTCGCTCACTGCGGGGGGCAGCCCGCCTGGTAGGAGAGCCTGTG CTGGGTGCCAAGATGGAGACAGCGGCTACCTTGCTACGGCGGGACATCGTATTTGCGGCC AGCCTCTACACCCAGTGA >chr6_cox_hap1_69|SGP_v1.0_predicted_protein_69|706_AA MDEPTITDLNTREEAEEEIDFEKAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQ KFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYI NDVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPLE HYLFTGNSSKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFGAKQPTHQGGPA QVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFD SMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRMMMGKPSQ LQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALAELTKRLGALEEP DMTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKSLSAGRVVVVKNQEHHNALGVI LQYLKLRERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVA CAMSSHELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQGIERVRAV AKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQ RLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLYTQ* # Gene 70 (Forward). 31 exons. 1231 aa. Score = 147.44 First 3386690 3386810 0.63 + 0 1 0.28 2.16 11.66 -42.35 AA 1: 41 chr6_cox_hap1_70 Internal 3397169 3397239 9.92 + 2 0 3.47 4.73 10.01 -24.85 AA 41: 64 chr6_cox_hap1_70 Internal 3397318 3397406 9.37 + 0 2 3.29 1.21 14.57 -31.15 AA 65: 94 chr6_cox_hap1_70 Internal 3397625 3397707 5.07 + 1 1 3.39 2.22 9.92 -29.05 AA 94:122 chr6_cox_hap1_70 Internal 3397878 3397974 -3.79 + 2 2 -0.41 2.14 8.42 -33.95 AA 122:154 chr6_cox_hap1_70 Internal 3398113 3398218 3.78 + 1 0 3.08 3.07 9.50 -37.10 AA 154:189 chr6_cox_hap1_70 Internal 3398316 3398448 7.38 + 0 1 3.85 2.75 12.92 -46.55 AA 190:234 chr6_cox_hap1_70 Internal 3398865 3398980 -4.42 + 2 0 7.28 -2.14 5.10 -40.60 AA 234:272 chr6_cox_hap1_70 Internal 3399720 3399905 15.77 + 0 0 3.16 2.32 22.87 -65.10 AA 273:334 chr6_cox_hap1_70 Internal 3400059 3400217 5.05 + 0 0 0.89 0.68 18.06 -55.65 AA 335:387 chr6_cox_hap1_70 Internal 3400469 3400514 -2.44 + 0 1 4.95 -0.46 3.88 -16.10 AA 388:403 chr6_cox_hap1_70 Internal 3401098 3401295 3.64 + 2 1 0.94 3.88 15.32 -69.30 AA 403:469 chr6_cox_hap1_70 Internal 3401918 3402057 9.76 + 2 0 4.31 0.62 16.86 -49.00 AA 469:515 chr6_cox_hap1_70 Internal 3402171 3402380 0.06 + 0 0 5.60 2.30 9.89 -73.50 AA 516:585 chr6_cox_hap1_70 Internal 3403880 3403996 2.24 + 0 0 4.44 3.55 6.87 -40.95 AA 586:624 chr6_cox_hap1_70 Internal 3404816 3404983 12.48 + 0 0 1.91 1.39 21.99 -58.80 AA 625:680 chr6_cox_hap1_70 Internal 3406486 3406579 5.40 + 0 1 -0.63 2.02 15.36 -32.90 AA 681:712 chr6_cox_hap1_70 Internal 3406677 3406863 16.99 + 2 2 2.36 0.64 26.54 -65.45 AA 712:774 chr6_cox_hap1_70 Internal 3406978 3407068 -2.07 + 1 0 0.98 0.12 10.08 -31.85 AA 774:804 chr6_cox_hap1_70 Internal 3407159 3407233 4.40 + 0 0 4.17 5.20 4.88 -26.25 AA 805:829 chr6_cox_hap1_70 Internal 3408725 3408827 5.68 + 0 1 1.55 3.01 12.49 -36.05 AA 830:864 chr6_cox_hap1_70 Internal 3409168 3409266 5.39 + 2 1 1.26 1.88 13.66 -34.65 AA 864:897 chr6_cox_hap1_70 Internal 3409449 3409532 2.56 + 2 1 3.39 0.58 9.95 -29.40 AA 897:925 chr6_cox_hap1_70 Internal 3409795 3409927 4.54 + 2 2 3.40 1.52 12.72 -46.55 AA 925:969 chr6_cox_hap1_70 Internal 3410071 3410184 5.37 + 1 2 4.16 -0.47 13.76 -39.90 AA 969:1007 chr6_cox_hap1_70 Internal 3411846 3411889 -4.10 + 1 1 4.05 -2.04 5.68 -15.40 AA 1007:1022 chr6_cox_hap1_70 Internal 3414029 3414183 15.00 + 2 0 3.02 4.92 18.08 -54.25 AA 1022:1073 chr6_cox_hap1_70 Internal 3414291 3414392 4.86 + 0 0 4.03 -0.11 12.56 -35.70 AA 1074:1107 chr6_cox_hap1_70 Internal 3414481 3414582 1.72 + 0 0 4.45 2.00 7.46 -35.70 AA 1108:1141 chr6_cox_hap1_70 Internal 3414684 3414770 3.04 + 0 0 3.31 1.50 9.51 -30.45 AA 1142:1170 chr6_cox_hap1_70 Terminal 3415341 3415523 4.17 + 0 0 1.37 0.00 18.65 -63.00 AA 1171:1231 chr6_cox_hap1_70 >chr6_cox_hap1_70|SGP_v1.0_predicted_cDNA_70|3693_NN ATGCAGCTGTTCCCGCGAGGCCTGTTTGAGGACGCGCTGCCGCCCATCGTGCTGAGGAGC CAGGTGTACAGCCTTGTGCCTGACAGGACCGTGGCCGACCGGCAGCTGGTGAGGGGCGTC GTTCGGTACCGGGTCTTTGCTCTGGATCAGAAGATGCGCCCGAGCACTGACACCATCACA GTCATGGTGGAGAACTCTCACGGCCTCCGCGTGCGGAAGAAGGAGGTGTACATGCCCTCG TCCATCTTCCAGGATGACTTTGTGATCCCAGACATCTCAGAGCCAGGGACCTGGAAGATC TCAGCCCGATTCTCAGATGGCCTGGAATCCAACAGCAGCACCCAGTTTGAGGTGAAGAAA TATGTCCTTCCCAACTTTGAGGTGAAGATCACCCCTGGAAAGCCCTACATCCTGACGGTG CCAGGCCATCTTGATGAAATGCAGTTAGACATCCAGGCCAGGTACATCTATGGGAAGCCA GTGCAGGGGGTGGCATATGTGCGCTTTGGGCTCCTAGATGAGGATGGTAAGAAGACTTTC TTTCGGGGGCTGGAGAGTCAGACCAAGCTGGTGAATGGACAGAGCCACATTTCCCTCTCA AAGGCAGAGTTCCAGGACGCCCTGGAGAAGCTGAATATGGGCATTACTGACCTCCAGGGG CTGCGCCTCTACGTTGCTGCAGCCATCATTGAGTCTCCAGGTGGGGAGATGGAGGAGGCA GAGCTCACATCCTGGTATTTTGTGTCATCTCCCTTCTCCTTGGATCTTAGCAAGACCAAG CGACACCTTGTGCCTGGGGCCCCCTTCCTGCTGCAGATCCTATCCCGAGGGCAGATCGTG TTCATGAATCGAGAGCCCAAGAGGACCCTGACCTCGGTCTCGGTGTTTGTGGACCATCAC CTGGCACCCTCCTTCTACTTTGTGGCCTTCTACTACCATGGAGACCACCCAGTGGCCAAC TCCCTGCGAGTGGATGTCCAGGCTGGGGCCTGCGAGGGCAAGCTGGAGCTCAGCGTGGAC GGTGCCAAGCAGTACCGGAACGGGGAGTCCGTGAAGCTCCACTTAGAAACCGACTCCCTA GCCCTGGTGGCGCTGGGAGCCTTGGACACAGCTCTGTATGCTGCAGGCAGCAAGTCCCAC AAGCCCCTCAACATGGGCAAGGTCTTTGAAGCTATGAACAGCTATGACCTCGGCTGTGGT CCTGGGGTGGGTCAGTATGCTTCCCCGACAGCCAAGCGCTGCTGCCAGGATGGGGTGACA CGTCTGCCCATGATGCGTTCCTGCGAGCAGCGGGCAGCCCGCGTGCAGCAGCCGGACTGC CGGGAGCCCTTCCTGTCCTGCTGCCAATTTGCTGAGAGTCTGCGCAAGAAGAGCAGGGAC AAGGGCCAGGCGGGCCTCCAACGAGGCCTATGTGTGGCCACCCCAGTTCAGCTCCGGGTG TTCCGCGAGTTCCACCTGCACCTCCGCCTGCCCATGTCTGTCCGCCGCTTTGAGCAGCTG GAGCTGCGGCCTGTCCTCTATAACTACCTGGATAAAAACCTGACTGTGAGCGTCCACGTG TCCCCAGTGGAGGGGCTGTGCCTGGCTGGGGGCGGAGGGCTGGCCCAGCAGGTGCTGGTG CCTGCGGGCTCTGCCCGGCCTGTTGCCTTCTCTGTGGTGCCCACGGCAGCCACCGCTGTG TCTCTGAAGGTGGTGGCTCGAGGGTCCTTCGAATTCCCTGTGGGAGATGCGGTGTCCAAG GTTCTGCAGATTGAGGGGGGTTTGGTGGGCAATGATGAGACTGTGGCACTCACAGCCTTT GTGACCATCGCCCTTCATCATGGGCTGGCCGTCTTCCAGGATGAGGGTGCAGAGCCATTG AAGCAGAGAGTGGACACGGTGATTGCCCTGGATGCCCTGTCTGCCTACTGGATTGCCTCC CACACCACTGAGGAGAGGGGTCTCAATGTGACTCTCAGCTCCACAGGCCGGAATGGGTTC AAGTCCCACGCGCTGCAGCTGAACAACCGCCAGATTCGCGGCCTGGAGGAGGAGCTGCAG GTCCTTCGTACCTACAATGTCCTGGACATGAAGAACACGACCTGCCAGGACCTACAGATA GAAGTGACAGTCAAAGGCCACGTCGAGTACACGATGGAAGCAAACGAGGACTATGAGGAC TATGAGTACGATGAGCTTCCAGCCAAGGATGACCCAGATGCCCCTCTGCAGCCCGTGACA CCCCTGCAGCTGTTTGAGGGTCGGAGGAACCGCCGCAGGAGGGAGGCGCCCAAGGTGGTG GAGGAGCAGGAGTCCAGGGTGCACTACACCGTGTGCATCTGGCGGAACGGCAAGGTGGGG CTGTCTGGCATGGCCATCGCGGACGTCACCCTCCTGAGTGGATTCCACGCCCTGCGTGCT GACCTGGAGAAGCTGACCTCCCTCTCTGACCGTTACGTGAGTCACTTTGAGACCGAGGGG CCCCACGTCCTGCTGTATTTTGACTCGGTCCCCACCTCCCGGGAGTGCGTGGGCTTTGAG GCTGTGCAGGAAGTGCCGGTGGGGCTGGTGCAGCCGGCCAGCGCAACCCTGTACGACTAC TACAACCCCGGGAAGTGCCCTCGCCAGCGTCGCGCCCTGGAGCGGGGTCTGCAGGACGAG GATGGCTACAGGATGAAGTTTGCCTGCTACTACCCCCGTGTGGAGTACGGCTTCCAGGTT AAGGTTCTCCGAGAAGACAGCAGAGCTGCTTTCCGCCTCTTTGAGACCAAGATCACCCAA GTCCTGCACTTCACCAAGGATGTCAAGGCCGCTGCTAATCAGATGCGCAACTTCCTGGTT CGAGCCTCCTGCCGCCTTCGCTTGGAACCTGGGAAAGAATATTTGATCATGGGTCTGGAT GGGGCCACCTATGACCTCGAGGGACACCCCCAGTACCTGCTGGACTCGAATAGCTGGATC GAGGAGATGCCCTCTGAACGCCTGTGCCGGAGCACCCGCCAGCGGGCAGCCTGTGCCCAG CTCAACGACTTCCTCCAGGATCCTGATCATGGATTCAGCAGCAGCGAACTCGCCAATGTA GTGGACAAGCTGGTGTCTAGGAACTACCCGGACCTGTCCTTGGGAGACTACTCCCTGCTC TGGAAAGCCCACAAGAAGCTCACCCGCTCAGCCCTGCTGCTGGGCATCCGTGACTCCATG GAGCCAGTGGTGGAGCAGCTGACCCAGGAGTTCTGTGAGCGCATGAGAGCCCAGCCCGGC ACCCCTGTGGCCATTGAGGAGGAATTCTCTCTCCTCACCTGCAGCATCATCTGTTACCTC ACCTTCGGAGACAAGATCAAGGACGACAACTTAATGCCTGCCTATTACAAATGTATCCAG GAGGTGTTAAAAACCTGGAGCCACTGGTCCATCCAAATTGTGGACGTGATTCCCTTTCTC AGGTTCTTCCCCAATCCAGGTCTCCGGAGGCTGAAGCAGGCCATAGAGAAGAGGGATCAC ATCGTGGAGATGCAGCTGAGGCAGCACAAGATTCAGCAGCGACTGCAGGAGGAGCTAGAC CACGAACTGGGCCCTGGTGCCTCCAGCTCCCGGGTCCCCTACAAGGACCGTGCACGGCTG CCCTTGCTCAATGCCACCATCGCCGAGGTGCTGCGCCTGCGGCCCGTTGTGCCCTTAGCC TTGCCCCACCGCACCACACGGCCCAGCAGGTGA >chr6_cox_hap1_70|SGP_v1.0_predicted_protein_70|1231_AA MQLFPRGLFEDALPPIVLRSQVYSLVPDRTVADRQLVRGVVRYRVFALDQKMRPSTDTIT VMVENSHGLRVRKKEVYMPSSIFQDDFVIPDISEPGTWKISARFSDGLESNSSTQFEVKK YVLPNFEVKITPGKPYILTVPGHLDEMQLDIQARYIYGKPVQGVAYVRFGLLDEDGKKTF FRGLESQTKLVNGQSHISLSKAEFQDALEKLNMGITDLQGLRLYVAAAIIESPGGEMEEA ELTSWYFVSSPFSLDLSKTKRHLVPGAPFLLQILSRGQIVFMNREPKRTLTSVSVFVDHH LAPSFYFVAFYYHGDHPVANSLRVDVQAGACEGKLELSVDGAKQYRNGESVKLHLETDSL ALVALGALDTALYAAGSKSHKPLNMGKVFEAMNSYDLGCGPGVGQYASPTAKRCCQDGVT RLPMMRSCEQRAARVQQPDCREPFLSCCQFAESLRKKSRDKGQAGLQRGLCVATPVQLRV FREFHLHLRLPMSVRRFEQLELRPVLYNYLDKNLTVSVHVSPVEGLCLAGGGGLAQQVLV PAGSARPVAFSVVPTAATAVSLKVVARGSFEFPVGDAVSKVLQIEGGLVGNDETVALTAF VTIALHHGLAVFQDEGAEPLKQRVDTVIALDALSAYWIASHTTEERGLNVTLSSTGRNGF KSHALQLNNRQIRGLEEELQVLRTYNVLDMKNTTCQDLQIEVTVKGHVEYTMEANEDYED YEYDELPAKDDPDAPLQPVTPLQLFEGRRNRRRREAPKVVEEQESRVHYTVCIWRNGKVG LSGMAIADVTLLSGFHALRADLEKLTSLSDRYVSHFETEGPHVLLYFDSVPTSRECVGFE AVQEVPVGLVQPASATLYDYYNPGKCPRQRRALERGLQDEDGYRMKFACYYPRVEYGFQV KVLREDSRAAFRLFETKITQVLHFTKDVKAAANQMRNFLVRASCRLRLEPGKEYLIMGLD GATYDLEGHPQYLLDSNSWIEEMPSERLCRSTRQRAACAQLNDFLQDPDHGFSSSELANV VDKLVSRNYPDLSLGDYSLLWKAHKKLTRSALLLGIRDSMEPVVEQLTQEFCERMRAQPG TPVAIEEEFSLLTCSIICYLTFGDKIKDDNLMPAYYKCIQEVLKTWSHWSIQIVDVIPFL RFFPNPGLRRLKQAIEKRDHIVEMQLRQHKIQQRLQEELDHELGPGASSSRVPYKDRARL PLLNATIAEVLRLRPVVPLALPHRTTRPSR* # Gene 71 (Reverse). 39 exons. 3268 aa. Score = 402.81 Terminal 3416284 3416385 -7.55 - 0 0 0.00 2.00 5.48 -34.65 AA 3235:3268 chr6_cox_hap1_71 Internal 3416706 3416869 12.91 - 2 0 3.66 1.43 20.14 -57.40 AA 3180:3234 chr6_cox_hap1_71 Internal 3416947 3417108 18.94 - 2 1 4.56 0.24 24.75 -56.70 AA 3126:3180 chr6_cox_hap1_71 Internal 3417201 3417297 0.59 - 0 1 1.76 3.31 7.93 -33.95 AA 3094:3126 chr6_cox_hap1_71 Internal 3417390 3417541 10.91 - 2 0 1.09 5.36 16.59 -53.20 AA 3043:3093 chr6_cox_hap1_71 Internal 3418684 3418827 1.46 - 2 1 2.26 2.80 10.85 -50.40 AA 2995:3043 chr6_cox_hap1_71 Internal 3419316 3419651 1.21 - 2 1 4.37 2.78 17.67 -117.60 AA 2883:2995 chr6_cox_hap1_71 Internal 3419941 3420261 7.51 - 2 1 1.69 2.19 25.16 -112.35 AA 2776:2883 chr6_cox_hap1_71 Internal 3421110 3421391 8.60 - 2 1 3.99 3.78 19.76 -98.70 AA 2682:2776 chr6_cox_hap1_71 Internal 3422669 3422947 6.79 - 2 1 4.51 3.16 18.40 -97.65 AA 2589:2682 chr6_cox_hap1_71 Internal 3423298 3423585 7.72 - 2 1 4.10 3.31 19.80 -100.80 AA 2493:2589 chr6_cox_hap1_71 Internal 3424205 3424522 16.63 - 2 1 3.65 4.01 27.49 -111.30 AA 2387:2493 chr6_cox_hap1_71 Internal 3424933 3425256 13.61 - 2 1 3.65 1.56 28.28 -113.40 AA 2279:2387 chr6_cox_hap1_71 Internal 3427605 3427928 15.46 - 2 1 5.16 4.71 24.48 -113.40 AA 2171:2279 chr6_cox_hap1_71 Internal 3428323 3428646 17.52 - 2 1 4.94 1.55 29.72 -113.40 AA 2063:2171 chr6_cox_hap1_71 Internal 3430786 3431109 18.49 - 2 1 4.94 3.93 27.80 -113.40 AA 1955:2063 chr6_cox_hap1_71 Internal 3431521 3431838 15.13 - 2 1 3.65 1.38 29.30 -111.30 AA 1849:1955 chr6_cox_hap1_71 Internal 3432993 3433325 11.42 - 2 1 4.94 3.65 23.39 -116.55 AA 1738:1849 chr6_cox_hap1_71 Internal 3436332 3436655 16.81 - 2 1 3.50 4.10 27.98 -113.40 AA 1630:1738 chr6_cox_hap1_71 Internal 3437092 3437418 16.70 - 2 1 4.94 3.02 27.64 -114.45 AA 1521:1630 chr6_cox_hap1_71 Internal 3439756 3440052 11.15 - 2 1 3.28 4.50 22.70 -103.95 AA 1422:1521 chr6_cox_hap1_71 Internal 3442613 3442936 15.78 - 2 1 3.65 4.86 26.22 -113.40 AA 1314:1422 chr6_cox_hap1_71 Internal 3443342 3443659 9.97 - 2 1 4.94 3.12 22.18 -111.30 AA 1208:1314 chr6_cox_hap1_71 Internal 3444505 3444813 12.07 - 2 1 3.28 2.73 25.54 -108.15 AA 1105:1208 chr6_cox_hap1_71 Internal 3445079 3445366 8.34 - 2 1 2.37 1.41 24.27 -100.80 AA 1009:1105 chr6_cox_hap1_71 Internal 3446942 3447136 3.98 - 2 1 2.26 -0.02 18.27 -68.25 AA 944:1009 chr6_cox_hap1_71 Internal 3448599 3448793 20.77 - 2 1 3.86 0.78 27.88 -68.25 AA 879:944 chr6_cox_hap1_71 Internal 3453984 3454316 20.57 - 2 1 4.94 4.37 29.26 -116.55 AA 768:879 chr6_cox_hap1_71 Internal 3456318 3456512 5.51 - 2 1 2.85 1.22 17.38 -68.25 AA 703:768 chr6_cox_hap1_71 Internal 3459363 3459659 23.84 - 2 1 2.16 1.97 35.64 -103.95 AA 604:703 chr6_cox_hap1_71 Internal 3462201 3462491 10.86 - 2 1 0.38 0.47 29.50 -101.85 AA 507:604 chr6_cox_hap1_71 Internal 3463732 3463995 5.27 - 2 1 3.08 -0.05 21.69 -92.40 AA 419:507 chr6_cox_hap1_71 Internal 3471241 3471944 17.05 - 1 1 2.81 -1.22 53.23 -246.40 AA 184:419 chr6_cox_hap1_71 Internal 3493721 3493812 1.19 - 0 2 3.65 4.28 5.32 -32.20 AA 154:184 chr6_cox_hap1_71 Internal 3493902 3494087 14.28 - 0 0 2.17 0.70 25.03 -65.10 AA 92:153 chr6_cox_hap1_71 Internal 3496209 3496294 -1.16 - 2 0 3.85 4.69 2.64 -30.10 AA 63: 91 chr6_cox_hap1_71 Internal 3502047 3502086 3.99 - 0 1 3.89 5.29 3.46 -14.00 AA 50: 63 chr6_cox_hap1_71 Internal 3502615 3502670 -1.80 - 2 0 0.46 1.93 7.51 -19.60 AA 31: 49 chr6_cox_hap1_71 First 3503061 3503151 10.30 - 0 1 0.71 5.27 12.98 -31.85 AA 1: 31 chr6_cox_hap1_71 >chr6_cox_hap1_71|SGP_v1.0_predicted_cDNA_71|9804_NN ATGGCGGAGCTGATGCTGCTCAGCGAGATTGCTGACCCGACGCGTTTCTTCACCGACAAC CTGCTTAGCCCGGAGGACTGGGGTCTGCAGAATGAAGTGGCCGAGGAGCAGACGCAGCTC TTCCGTTGCCCGGAGCAGGATGTCCCGCTCCGAGTCATCGCGTCTCTCCACAGAGCCATC CAGCGAGATGTCCAGACCAAGATAGAACCTGTCTCTCCATGTTCTTCCGTCAACTCTGAG GCCTCCCTGCTCTCAGCCGACTCCTCCAGCCAGGCAAAGCTGCTGAAGCGGCAGCAGCGA ATGATCAAGAACCGGGAGTCAGCCTGCCAGTCCCGGAGAAAGAAGAAAGAGTATCTGCAG GGACTGGAGGCTCGGCTGCAAGCAGTACTGGCTGACAACCAGCAGCTCCGCCGAGAGAAT GCTGCCCTCCGGCGGCGGCTGGAGGCCCTGCTGGCTGAAAACAGCGAGCTCAAGTTAGGG TCTGGAAACAGGAAGGTGGTCTGCATCATGGTCTTCCTTCTCTTCATTGCCTTCAACTTT GGACCTGTCAGTCAGAGGGGGCGCTGTGAGAATGGGCGCTGCGTGTGTAACCCCGGCTAC GCTGGCGAGGACTGTGGGGTGAGGAGCTGCCCTCGGGGCTGCAGCCAGCGGGGACGCTGC AAGGACGGGCGCTGCGTGTGTGACCCCGGCTACACTGGCGAGGACTGTGGTACGCGGAGC TGCCCCTGGGACTGTGGCGAGGGCGGGCGCTGCGTGGACGGCCGCTGCGTGTGCTGGCCC GGGTACACAGGCGAGGACTGCAGCACGCGGACATGTCCGAGGGACTGCCGGGGCCGCGGG CGCTGCGAGGACGGCGAATGCATTTGCGACACGGGCTACAGCGGGGACGACTGCGGCGTG CGCAGCTGCCCTGGCGACTGCAACCAAAGGGGCCGCTGCGAGGACGGCCGCTGCGTGTGC TGGCCGGGGTACACTGGAACCGATTGCGGCTCGCGCGCCTGCCCACGCGACTGTAGAGGT CGCGGGCGCTGCGAGAACGGCGTGTGTGTTTGCAATGCGGGCTACAGCGGCGAGGACTGC GGTGTGCGCAGCTGTCCTGGGGACTGTCGTGGCCGGGGCCGCTGTGAGAGTGGCCGCTGC ATGTGTTGGCCGGGGTACACAGGCCGGGACTGCGGCACGCGCGCCTGTCCTGGCGACTGT CGCGGGCGCGGGCGCTGCGTGGATGGCCGCTGCGTGTGCAACCCGGGCTTCACCGTGATC GATGGGCCCCAGGACCTCCGAGTGGTGGCTGTGACACCGACAACACTGGAGCTTGGCTGG CTGCGTCCCCAGGCTGAGGTGGACCGATTTGTGGTGTCCTACGTCAGTGCCGGCAACCAG AGGGTGAGGCTGGAAGTGCCCCCTGAAGCAGACGGGACGCTGCTGACTGACCTGATGCCA GGCGTAGAATATGTGGTGACTGTCACAGCGGAGCGGGGCCGGGCAGTCAGCTACCCAGCT TCTGTCAGGGCCAACACAGGCGTCGACCGGGTGGCTGCGTCCCGCCACCCCAAGCCAGAG GTGCTGGGCAGTTCCGCCGATGGCGCGCTTCTCGTGTCTCTCGACGGGCTCCGCGGCCAG TTCGAGCGCGTGGTGCTGCGCTGGCGGCCTCAGCCGCCTGCAGAGGGCCCCGGCGGTGAG CTGACTGTGCCGGGCACCACGCGCACCGTCAGCCTGCCCGACCTCAGGCCCGGCACCACC TACCACGTGGAGGTCCACGGGGTGCGGGCGGGGCAGACCTCCAAGTCCTACGCCTTCATC ACCACCACAGACAAGGATGAGGAGAAGCCTGGGAAGTCCTCAGGCCCACCACGCCTGGGT GAGCTGACGGTGACAGACAGGACCTCCGACTCCTTGCTCCTGCGCTGGACGGTCCCCGAG GGCGAGTTTGACTCCTTCGTGATCCAGTACAAAGACAGGGACGGGCAGCCCCAGGTGGTG CCCGTGGAAGGACCCCAGCGCTCGGCCGTCATCACCTCCCTGGATCCTGGCCGCAAGTAC AAATTTGTCCTGTATGGGTTTGTTGGCAAGAAGAGGCATGGTCCGCTGGTGGCTGAAGCC AAGATCTTGGCCCAGGGCCCCTTCGACTCATTCATGGTCCAGTACAAGGATGCACAGGGG CAGCCCCAGGCAGTGCCTGTTGCGGGGGATGAGAATGAGGTTACTGTCCCCGGCCTGGAT CCCGACCGGAAGTATAAGATGAACCTCTACGGGCTTCGTGGCAGGCAGCGTGTGGGGCCC GAGTCTGTGGTGGCCAAGACTGCTCCTCAGGAGGATGTGGACGAGACCCCCAGCCCCACA GAACTGGGCACGGAGGCCCCGGAGTCCCCCGAGGAGCCGCTCCTGGGGGAGCTGACAGTG ACAGGATCCTCCCCTGATTCGCTGAGCCTCTTCTGGACCGTCCCCCAGGGCAGCTTCGAC TCTTTCACCGTGCAGTACAAGGACAGGGATGGGCGGCCCCGGGCGGTGCGTGTTGGGGGC AAGGAGAGTGAGGTCACCGTGGGAGGCCTAGAGCCCGGGCACAAGTACAAGATGCACCTG TACGGCCTCCACGAGGGGCAGCGCGTGGGCCCGGTGTCCGCCGTGGGCGTGACAGTCCCC GAGGGCCAGTTTGACTCCTTCATAGTCCAGTACAAGGACAAGGACGGGCAGCCCCAGGTG GTGCCGGTGGCGGCAGACCAGCGAGAGGTCACAGTCTACAACCTGGAGCCTGAGAGAAAA TATAAGATGAACATGTATGGACTACATGATGGGCAACGCATGGGCCCCCTGTCTGTGGTC ATCGTGACGGTCCCTGAGGGTGAATTCGACTCCTTTGTGGTTCAGTACAAGGACAGGGAC GGGCAGCCCCAGGTGGTGCCCGTGGCTGCAGATCAGCGGGAGGTCACTATCCCTGACCTG GAACCCTCCCGCAAGTACAAGTTCCTGCTCTTTGGGATCCAGGATGGGAAACGACGCAGC CCAGTCTCTGTGGAGGCAAAGACGGTTGCCCGAGGTGACGCCAGCCCAGGGGCCCCACCC CGCCTTGGGGAGCTGTGGGTGACAGACCCCACCCCAGACTCACTGCGCCTCTCCTGGACG GTTCCTGAGGGCCAGTTCGACTCTTTTGTGGTCCAGTTCAAGGACAAAGACGGGCCCCAG GTGGTGCCCGTGGAGGGCCATGAGCGCTCTGTCACTGTCACCCCTCTGGATGCCGGCCGC AAGTACAGATTCCTCCTCTATGGCCTCCTGGGCAAGAAGCGCCATGGCCCTCTCACTGCC GACGGCACCACGGAAGCCCGGAGTGCTATGGATGATACTGGAACAAAGCGTCCCCCAAAA CCCCGTCTGGGGGAGGAGCTGCAGGTGACCACCGTGACCCAGAACTCCGTGGGCCTCTCC TGGACAGTCCCTGAGGGCCAGTTTGACTCCTTTGTGGTCCAGTACAAAGACAGGGACGGG CAGCCCCAGGTGGTGCCCGTGGAGGGCAGCCTCAGGGAGGTCAGCGTGCCGGGCCTGGAC CCTGCCCACAGGTACAAGCTGCTGCTCTACGGGCTGCACCACGGCAAGCGTGTGGGCCCC ATCTCGGCCGTCGCCATTACTGTCCCGGAGGAGGAGAAGCCTTCAGAACCTCCCACCGCA ACCCCCGAGCCCCCCATCAAGCCTCGCCTGGGGGAGCTGACCGTGACAGATGCCACCCCT GACTCCCTCAGCCTGTCCTGGACAGTTCCCGAGGGACAGTTTGACCACTTCCTGGTCCAG TACAGGAATGGAGATGGGCAGCCCAAGGCAGTGAGGGTGCCAGGGCACGAGGAAGGGGTC ACCATCTCGGGCCTGGAGCCAGACCATAAATACAAGATGAACCTGTACGGCTTCCACGGT GGCCAGCGCATGGGCCCTGTGTCTGTCGTCGGGGTGACAGCTGCAGAGGAAGAGACCCCC AGCCCCACAGAACCCAGCATGGAGGCCCCGGAGCCCGCTGAGGAGCCACTCCTGGGGGAG CTAACAGTGACAGGATCCTCCCCTGACTCGCTGAGCCTCTCCTGGACCGTCCCCCAGGGC CGCTTCGACTCCTTCACCGTGCAGTACAAGGACAGGGACGGGCGGCCCCAGGTGGTGCGT GTTGGGGGCGAGGAGAGTGAAGTCACCGTGGGGGGCCTGGAGCCTGGGCGCAAGTACAAG ATGCACCTGTACGGCCTCCACGAGGGGCGGCGCGTGGGCCCAGTGTCTGCTGTGGGCGTC ACGGCCCCCGAAGAGGAGTCCCCTGATGCTCCTCTTGCAAAGCTGCGCCTAGGGCAGATG ACAGTGAGAGACATCACCTCCGACTCCCTCAGCCTCTCCTGGACAGTCCCCGAGGGCCAG TTTGACCATTTCTTGGTCCAGTTTAAGAATGGGGACGGGCAGCCCAAGGCGGTGCGGGTG CCGGGACACGAGGATGGGGTCACCATCTCGGGCCTGGAGCCAGACCACAAGTACAAGATG AACCTGTACGGCTTCCACGGTGGCCAGCGCGTGGGCCCCGTGTCTGCTGTTGGTTTAACT GCCCCAGGAAAGGATGAAGAAATGGCCCCAGCCTCGACAGAACCTCCCACCCCTGAACCC CCCATCAAGCCTCGCCTGGAGGAGCTGACCGTGACAGATGCGACCCCTGACTCCCTCAGC CTGTCCTGGACGGTTCCCGAGGGACAGTTTGACCACTTCCTGGTCCAGTACAAGAATGGG GATGGGCAGCCCAAGGCAACACGGGTGCCAGGACATGAGGACAGGGTCACCATCTCCGGC CTGGAGCCAGACAACAAGTACAAGATGAACCTGTACGGCTTCCACGGTGGCCAGCGTGTG GGCCCCGTGTCTGCCATCGGGGTGACAGCTGCAGAGGAAGAGACCCCCAGCCCCACAGAA CCCAGCATGGAGGCCCCGGAGCCCCCTGAGGAGCCGCTCCTGGGGGAGCTAACAGTGACA GGATCCTCCCCTGACTCGCTGAGCCTCTCCTGGACCGTCCCCCAGGGCCGCTTCGACTCC TTCACCGTGCAGTACAAGGACAGGGACGGGCGGCCCCAGGTGGTGCGTGTTGGGGGCGAG GAGAGCGAGGTCACCGTGGGGGGCCTGGAGCCTGGGCGCAAATACAAGATGCACCTGTAC GGCCTCCACGAGGGGCGGCGTGTGGGCCCGGTGTCCACCGTGGGCGTGACTGCCCCACAA GAGGATGTGGACGAGACCCCCAGCCCTACAGAACCAGGCACAGAGGCCCCAGAGCCCCCC GAGGAGCCTCTCCTGGGGGAGCTGACAGTGACAGGATCCTCCCCTGACTCGCTGAGCCTT TCCTGGACCGTCCCCCAGGGCCGCTTTGACTCCTTCACCGTGCAGTACAAGGACAGGGAC GGGCGGCCCCAGGCGGTGCGTGTTGGGGGCCAGGAGAGCAAGGTCACTGTGAGGGGCCTG GAGCCTGGGCGCAAGTACAAGATGCACCTGTACGGCCTCCACGAGGGGCGGCGCCTAGGC CCGGTGTCTGCCGTGGGCGTCACAGAGGATGAAGCCGAGACCACCCAAGCAGTGCCTACC ATGACCCCTGAGCCCCCCATCAAGCCTCGCCTGGGGGAGCTGACCATGACAGATGCCACC CCTGACTCCCTCAGCCTGTCCTGGACGGTTCCCGAGGGCCAGTTTGACCACTTCCTGGTC CAGTACAGGAATGGGGATGGGCAGCCCAAGGCGGTGCGGGTGCCGGGGCACGAGGACGGG GTCACCATCTCAGGCCTGGAGCCAGACCATAAATACAAGATGAACCTGTACGGCTTCCAC GGTGGCCAGCGCGTGGGCCCCATCTCTGTCATTGGGGTGACGGCTGCAGAGGAAGAGACC CCCAGCCCCACGGAACTCAGCACTGAGGCCCCGGAGCCCCCTGAGGAGCCGCTCCTGGGG GAGCTGACAGTGACAGGATCCTCCCCTGACTCGCTGAGCCTCTCCTGGACCATCCCCCAG GGCCACTTCGACTCCTTCACCGTGCAGTACAAGGACAGGGACGGGCGGCCCCAGGTGATG CGTGTCAGGGGCGAGGAGAGCGAGGTCACCGTGGGGGGCCTGGAGCCCGGGCGCAAATAC AAGATGCACCTGTACGGCCTCCACGAGGGGCGGCGTGTGGGCCCGGTGTCCACCGTGGGT GTGACAGCTCCAGAGGATGAAGCAGAGACCACCCAAGCAGTGCCCACCACAACCCCTGAG CCCCCCAACAAGCCTCGCCTCGGGGAGCTGACCGTGACAGATGCCACCCCTGACTCCCTC AGCCTGTCCTGGATGGTCCCCGAGGGCCAGTTTGACCACTTCCTGGTCCAGTACAGGAAT GGGGATGGGCAGCCCAAGGTGGTGCGGGTGCCGGGGCACGAGGACGGGGTCACCATCTCA GGCCTGGAGCCAGACCACAAGTACAAGATGAACCTGTACGGCTTCCACGGTGGCCAGCGC GTGGGCCCCATCTCTGTCATTGGGGTGACAGCTGCAGAGGAAGAAACTCCCGCCCCCACA GAACCCAGCACGGAGGCCCCGGAGCCCCCTGAGGAGCCGCTCCTGGGGGAGCTGACAGTG ACAGGATCCTCCCCTGACTCGCTGAGCCTCTCCTGGACCATCCCCCAGGGCCGCTTCGAC TCCTTCACTGTGCAGTACAAGGACAGGGACGGGCGGCCCCAGGTGGTGCGTGTCAGGGGC GAGGAGAGCGAGGTCACCGTGGGGGGCCTGGAGCCCGGGTGCAAATACAAGATGCACCTG TACGGCCTCCACGAGGGGCAGCGCGTGGGCCCAGTGTCCGCTGTGGGTGTGACAGCTCCA AAGGATGAAGCCGAGACCACCCAAGCAGTGCCTACCATGACCCCTGAGCCCCCCATCAAG CCTCGCCTGGGGGAGCTGACCGTGACAGATGCCACCCCCGACTCCCTCAGCCTGTCCTGG ATGGTTCCCGAGGGCCAGTTTGACCACTTCCTGGTCCAGTACAGGAATGGGGATGGGCAG CCCAAGGCGGTGCGGGTGCCGGGGCACGAGGACGGGGTCACCATCTCAGGCCTGGAGCCA GACCATAAATACAAGATGAACCTGTACGGCTTCCACGGTGGCCAGCGCGTAGGCCCTGTG TCTGCCATTGGGGTGACGGAGGAAGAGACCCCCAGCCCCACAGAACCCAGCACTGAGGCC CCGGAGGCCCCTGAGGAGCCGCTCCTGGGGGAGTTGACAGTGACAGGATCCTCCCCTGAC TCGCTGAGCCTCTCCTGGACCGTCCCCCAGGGCCGCTTCGACTCCTTCACCGTGCAGTAC AAGGACAGGGACGGGCAGCCCCAGGTGGTGCGTGTCAGGGGCGAGGAGAGCGAGGTCACC GTGGGGGGCCTGGAGCCCGGGCGCAAATACAAGATGCATCTGTACGGCCTCCACGAGGGG CAGCGCGTGGGCCCAGTGTCCACCGTGGGCATCACGGCGCCCCTGCCCACACCACTGCCG GTGGAGCCCCGCCTGGGGGAGCTGGCGGTGGCGGCCGTGACCTCGGACTCAGTGGGCCTC TCATGGACGGTGGCCCAGGGCCCCTTTGACTCCTTCCTGGTACAGTACAGGGACGCGCAG GGGCAGCCCCAGGCAGTGCCTGTGAGCGGAGACCTCCGAGCGGTCGCCGTCTCGGGGCTG GACCCGGCCCGCAAGTACAAGTTCCTGCTCTTTGGACTCCAGAATGGGAAACGCCACGGC CCAGTCCCTGTGGAGGCCAGGACCGCCCCAGACACCAAACCGTCTCCCCGCCTGGGGGAG CTGACTGTGACAGATGCGACCCCTGACTCCGTGGGCCTCTCGTGGACGGTCCCTGAGGGC GAATTCGACTCCTTCGTGGTCCAGTACAAGGATAAGGATGGTCGGCTCCAGGTGGTGCCG GTGGCAGCCAACCAGCGGGAGGTCACAGTCCAGGGCCTGGAGCCCAGTAGGAAATACAGG TTCCTGCTCTATGGTCTGTCAGGCAGGAAACGACTGGGCCCCATCTCTGCTGACAGCACC ACAGCTCCCCTGGAGAAGGAGCTACCTCCCCACCTGGGGGAACTGACCGTGGCTGAGGAG ACCTCCAGCTCTCTGCGCCTGTCCTGGACGGTAGCCCAGGGCCCCTTTGACTCCTTCGTG GTCCAGTACAGGGACACGGACGGGCAGCCCAGGGCAGTGCCTGTGGCCGCAGACCAGCGC ACAGTCACCGTAGAGGACCTGGAGCCTGGCAAGAAATACAAGTTTCTGCTCTACGGGCTC CTTGGGGGAAAGCGCCTGGGCCCGGTCTCTGCCCTGGGAATGACAGCCCCAGAAGAGGAC ACACCAGCCCCAGAGTTAGCCCCAGAGGCCCCTGAGCCTCCTGAAGAGCCCCGCCTAGGA GTGCTGACCGTGACCGACACAACCCCAGACTCCATGCGCCTCTCGTGGAGCGTGGCCCAG GGCCCCTTTGATTCCTTCGTGGTCCAGTATGAGGACACGAACGGGCAGCCCCAGGCCTTG CTCGTGGACGGCGACCAGAGCAAGATCCTCATCTCAGGCCTGGAGCCCAGCACCCCCTAC AGGTTCCTCCTCTATGGCCTCCATGAAGGGAAGCGCCTGGGGCCCCTCTCAGCTGAGGGC ACCACAGGGCTGGCTCCTGCTGGTCAGACCTCAGAGGAGTCAAGGCCCCGCCTGTCCCAG CTGTCTGTGACTGACGTGACCACCAGTTCACTGAGGCTCAACTGGGAGGCCCCACCGGGG GCCTTCGACTCCTTCCTGCTCCGCTTTGGGGTTCCATCACCAAGCACTCTGGAGCCGCAT CCGCGTCCACTGCTGCAGCGCGAGCTGATGGTGCCGGGGACGCGGCACTCGGCCGTGCTC CGGGACCTGCGTTCCGGGACTCTGTACAGCCTGACACTGTATGGGCTGCGAGGACCCCAC AAGGCCGACAGCATCCAGGGAACCGCCCGCACCCTCAGCCCAGGGGAGCCTCAGAGTGTG CAGGTGGATGGCCAGGCCCGGACCCAGAAACTCCAGGGGCTGATCCCAGGCGCTCGCTAT GAGGTGACCGTGGTCTCGGTCCGAGGCTTTGAGGAGAGTGAGCCTCTCACAGGCTTCCTC ACCACGGGTGGGCTGCGGATCCCCTTCCCCAGGGACTGCGGGGAGGAGATGCAGAACGGA GCCGGTGCCTCCAGGACCAGCACCATCTTCCTCAACGGCAACCGCGAGCGGCCCCTGAAC GTGTTTTGCGACATGGAGACTGATGGGGGCGGCTGGCTGGTGTTCCAGCGCCGCATGGAT GGACAGACAGACTTCTGGAGGGACTGGGAGGACTATGCCCATGGTTTTGGGAACATCTCT GGAGAGTTCTGGCTGGGCAATGAGGCCCTGCACAGCCTGACACAGGCAGGTGACTACTCC ATGCGCGTGGACCTGCGGGCTGGGGACGAGGCTGTGTTCGCCCAGTACGACTCCTTCCAC GTAGACTCGGCTGCGGAGTACTACCGCCTCCACTTGGAGGGCTACCACGGCACCGCAGGG GACTCCATGAGCTACCACAGCGGCAGTGTCTTCTCTGCCCGTGATCGGGACCCCAACAGC TTGCTCATCTCCTGCGCTGTCTCCTACCGAGGGGCCTGGTGGTACAGGAACTGCCACTAC GCCAACCTCAACGGGCTCTACGGGAGCACAGTGGACCATCAGGGAGTGAGCTGGTACCAC TGGAAGGGCTTCGAGTTCTCGGTGCCCTTCACGGAAATGAAGCTGAGACCAAGAAACTTT CGCTCCCCAGCGGGGGGAGGCTGA >chr6_cox_hap1_71|SGP_v1.0_predicted_protein_71|3268_AA MAELMLLSEIADPTRFFTDNLLSPEDWGLQNEVAEEQTQLFRCPEQDVPLRVIASLHRAI QRDVQTKIEPVSPCSSVNSEASLLSADSSSQAKLLKRQQRMIKNRESACQSRRKKKEYLQ GLEARLQAVLADNQQLRRENAALRRRLEALLAENSELKLGSGNRKVVCIMVFLLFIAFNF GPVSQRGRCENGRCVCNPGYAGEDCGVRSCPRGCSQRGRCKDGRCVCDPGYTGEDCGTRS CPWDCGEGGRCVDGRCVCWPGYTGEDCSTRTCPRDCRGRGRCEDGECICDTGYSGDDCGV RSCPGDCNQRGRCEDGRCVCWPGYTGTDCGSRACPRDCRGRGRCENGVCVCNAGYSGEDC GVRSCPGDCRGRGRCESGRCMCWPGYTGRDCGTRACPGDCRGRGRCVDGRCVCNPGFTVI DGPQDLRVVAVTPTTLELGWLRPQAEVDRFVVSYVSAGNQRVRLEVPPEADGTLLTDLMP GVEYVVTVTAERGRAVSYPASVRANTGVDRVAASRHPKPEVLGSSADGALLVSLDGLRGQ FERVVLRWRPQPPAEGPGGELTVPGTTRTVSLPDLRPGTTYHVEVHGVRAGQTSKSYAFI TTTDKDEEKPGKSSGPPRLGELTVTDRTSDSLLLRWTVPEGEFDSFVIQYKDRDGQPQVV PVEGPQRSAVITSLDPGRKYKFVLYGFVGKKRHGPLVAEAKILAQGPFDSFMVQYKDAQG QPQAVPVAGDENEVTVPGLDPDRKYKMNLYGLRGRQRVGPESVVAKTAPQEDVDETPSPT ELGTEAPESPEEPLLGELTVTGSSPDSLSLFWTVPQGSFDSFTVQYKDRDGRPRAVRVGG KESEVTVGGLEPGHKYKMHLYGLHEGQRVGPVSAVGVTVPEGQFDSFIVQYKDKDGQPQV VPVAADQREVTVYNLEPERKYKMNMYGLHDGQRMGPLSVVIVTVPEGEFDSFVVQYKDRD GQPQVVPVAADQREVTIPDLEPSRKYKFLLFGIQDGKRRSPVSVEAKTVARGDASPGAPP RLGELWVTDPTPDSLRLSWTVPEGQFDSFVVQFKDKDGPQVVPVEGHERSVTVTPLDAGR KYRFLLYGLLGKKRHGPLTADGTTEARSAMDDTGTKRPPKPRLGEELQVTTVTQNSVGLS WTVPEGQFDSFVVQYKDRDGQPQVVPVEGSLREVSVPGLDPAHRYKLLLYGLHHGKRVGP ISAVAITVPEEEKPSEPPTATPEPPIKPRLGELTVTDATPDSLSLSWTVPEGQFDHFLVQ YRNGDGQPKAVRVPGHEEGVTISGLEPDHKYKMNLYGFHGGQRMGPVSVVGVTAAEEETP SPTEPSMEAPEPAEEPLLGELTVTGSSPDSLSLSWTVPQGRFDSFTVQYKDRDGRPQVVR VGGEESEVTVGGLEPGRKYKMHLYGLHEGRRVGPVSAVGVTAPEEESPDAPLAKLRLGQM TVRDITSDSLSLSWTVPEGQFDHFLVQFKNGDGQPKAVRVPGHEDGVTISGLEPDHKYKM NLYGFHGGQRVGPVSAVGLTAPGKDEEMAPASTEPPTPEPPIKPRLEELTVTDATPDSLS LSWTVPEGQFDHFLVQYKNGDGQPKATRVPGHEDRVTISGLEPDNKYKMNLYGFHGGQRV GPVSAIGVTAAEEETPSPTEPSMEAPEPPEEPLLGELTVTGSSPDSLSLSWTVPQGRFDS FTVQYKDRDGRPQVVRVGGEESEVTVGGLEPGRKYKMHLYGLHEGRRVGPVSTVGVTAPQ EDVDETPSPTEPGTEAPEPPEEPLLGELTVTGSSPDSLSLSWTVPQGRFDSFTVQYKDRD GRPQAVRVGGQESKVTVRGLEPGRKYKMHLYGLHEGRRLGPVSAVGVTEDEAETTQAVPT MTPEPPIKPRLGELTMTDATPDSLSLSWTVPEGQFDHFLVQYRNGDGQPKAVRVPGHEDG VTISGLEPDHKYKMNLYGFHGGQRVGPISVIGVTAAEEETPSPTELSTEAPEPPEEPLLG ELTVTGSSPDSLSLSWTIPQGHFDSFTVQYKDRDGRPQVMRVRGEESEVTVGGLEPGRKY KMHLYGLHEGRRVGPVSTVGVTAPEDEAETTQAVPTTTPEPPNKPRLGELTVTDATPDSL SLSWMVPEGQFDHFLVQYRNGDGQPKVVRVPGHEDGVTISGLEPDHKYKMNLYGFHGGQR VGPISVIGVTAAEEETPAPTEPSTEAPEPPEEPLLGELTVTGSSPDSLSLSWTIPQGRFD SFTVQYKDRDGRPQVVRVRGEESEVTVGGLEPGCKYKMHLYGLHEGQRVGPVSAVGVTAP KDEAETTQAVPTMTPEPPIKPRLGELTVTDATPDSLSLSWMVPEGQFDHFLVQYRNGDGQ PKAVRVPGHEDGVTISGLEPDHKYKMNLYGFHGGQRVGPVSAIGVTEEETPSPTEPSTEA PEAPEEPLLGELTVTGSSPDSLSLSWTVPQGRFDSFTVQYKDRDGQPQVVRVRGEESEVT VGGLEPGRKYKMHLYGLHEGQRVGPVSTVGITAPLPTPLPVEPRLGELAVAAVTSDSVGL SWTVAQGPFDSFLVQYRDAQGQPQAVPVSGDLRAVAVSGLDPARKYKFLLFGLQNGKRHG PVPVEARTAPDTKPSPRLGELTVTDATPDSVGLSWTVPEGEFDSFVVQYKDKDGRLQVVP VAANQREVTVQGLEPSRKYRFLLYGLSGRKRLGPISADSTTAPLEKELPPHLGELTVAEE TSSSLRLSWTVAQGPFDSFVVQYRDTDGQPRAVPVAADQRTVTVEDLEPGKKYKFLLYGL LGGKRLGPVSALGMTAPEEDTPAPELAPEAPEPPEEPRLGVLTVTDTTPDSMRLSWSVAQ GPFDSFVVQYEDTNGQPQALLVDGDQSKILISGLEPSTPYRFLLYGLHEGKRLGPLSAEG TTGLAPAGQTSEESRPRLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPH PRPLLQRELMVPGTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGTARTLSPGEPQSV QVDGQARTQKLQGLIPGARYEVTVVSVRGFEESEPLTGFLTTGGLRIPFPRDCGEEMQNG AGASRTSTIFLNGNRERPLNVFCDMETDGGGWLVFQRRMDGQTDFWRDWEDYAHGFGNIS GEFWLGNEALHSLTQAGDYSMRVDLRAGDEAVFAQYDSFHVDSAAEYYRLHLEGYHGTAG DSMSYHSGSVFSARDRDPNSLLISCAVSYRGAWWYRNCHYANLNGLYGSTVDHQGVSWYH WKGFEFSVPFTEMKLRPRNFRSPAGGG* # Gene 72 (Reverse). 3 exons. 113 aa. Score = 33.65 Terminal 3524172 3524348 28.00 - 0 0 0.00 5.61 31.05 -60.90 AA 55:113 chr6_cox_hap1_72 Internal 3524487 3524609 6.27 - 0 0 2.80 2.75 12.80 -43.05 AA 14: 54 chr6_cox_hap1_72 First 3533323 3533361 -0.61 - 0 0 5.87 1.33 1.51 -13.65 AA 1: 13 chr6_cox_hap1_72 >chr6_cox_hap1_72|SGP_v1.0_predicted_cDNA_72|339_NN ATGGAGGGGACAAAGCTGGAGGCTGTTATAATAGTCCAGGGCCCAGGGCTGGCCCTACTG GAGCCGAGGCGCCCGCCACACGACTACATGCCCATCGCGGTGCTGACCACCATCTGTTGC TTCTGGCCTACTGGCATCATTGCCATCTTCAAGGCCGTGCAGGTGCGCACGGCCTTGGCC CGCGGAGACATGGTGTCGGCCGAGATCGCTTCACGCGAGGCCCGGAACTTCTCCTTCATC TCCCTGGCCGTGGGCATCGCGGCCATGGTGCTCTGTACCATCCTCACCGTAGTCATCATC ATCGCCGCGCAGCACCACGAGAACTACTGGGATCCCTAA >chr6_cox_hap1_72|SGP_v1.0_predicted_protein_72|113_AA MEGTKLEAVIIVQGPGLALLEPRRPPHDYMPIAVLTTICCFWPTGIIAIFKAVQVRTALA RGDMVSAEIASREARNFSFISLAVGIAAMVLCTILTVVIIIAAQHHENYWDP* # Gene 73 (Forward). 3 exons. 71 aa. Score = 9.70 First 3541670 3541775 4.61 + 0 1 3.13 4.03 8.25 -37.10 AA 1: 36 chr6_cox_hap1_73 Internal 3542315 3542394 12.73 + 2 0 4.36 3.58 12.79 -28.00 AA 36: 62 chr6_cox_hap1_73 Terminal 3543200 3543226 -7.63 + 0 0 5.21 0.00 -1.77 -8.40 AA 63: 71 chr6_cox_hap1_73 >chr6_cox_hap1_73|SGP_v1.0_predicted_cDNA_73|213_NN ATGTACCGCGTTATGTGGCGGGAGGTGAAGCGGGAGGTTCAGCAGACCCATGCAGTGTGC TGCCAGGGCTGGAAGAAGCGGCACCCGGGGGCGCTCACCTGTGAAGTTCGGGAGGCGGAA AAAGATGAGCGCGCTCTGAAGCAGGAGATTCACGAGCTGCGAGGGCGCCTGGAGCGGCTG GAGCAGTTTTTTTGCTGTTATCCAGATAATTAA >chr6_cox_hap1_73|SGP_v1.0_predicted_protein_73|71_AA MYRVMWREVKREVQQTHAVCCQGWKKRHPGALTCEVREAEKDERALKQEIHELRGRLERL EQFFCCYPDN* # Gene 74 (Reverse). 11 exons. 477 aa. Score = 73.34 Terminal 3544241 3544413 -10.33 - 2 0 0.00 3.23 5.53 -59.50 AA 420:477 chr6_cox_hap1_74 Internal 3544931 3545003 5.82 - 0 1 2.37 4.13 9.00 -25.55 AA 396:420 chr6_cox_hap1_74 Internal 3545390 3545565 6.08 - 2 0 2.49 -0.15 18.78 -61.60 AA 337:395 chr6_cox_hap1_74 Internal 3545902 3545947 -1.52 - 0 1 2.60 3.94 2.29 -16.10 AA 322:337 chr6_cox_hap1_74 Internal 3545981 3546035 2.59 - 1 0 2.15 1.89 8.49 -19.25 AA 303:321 chr6_cox_hap1_74 Internal 3546262 3546375 15.12 - 1 2 1.47 1.80 21.35 -39.90 AA 265:303 chr6_cox_hap1_74 Internal 3562263 3562357 16.72 - 0 2 -1.38 6.39 19.66 -33.25 AA 234:265 chr6_cox_hap1_74 Internal 3562609 3562744 9.25 - 1 0 1.19 4.43 15.53 -47.60 AA 188:233 chr6_cox_hap1_74 Internal 3562928 3563118 13.41 - 0 2 1.39 0.46 25.40 -66.85 AA 125:188 chr6_cox_hap1_74 Internal 3563219 3563466 12.74 - 2 0 4.37 0.33 24.53 -86.80 AA 42:124 chr6_cox_hap1_74 First 3592954 3593077 3.45 - 0 1 3.50 1.42 10.77 -43.40 AA 1: 42 chr6_cox_hap1_74 >chr6_cox_hap1_74|SGP_v1.0_predicted_cDNA_74|1431_NN ATGTCCCCAGGCTTAGAAGGGCAGCTCTGTGAGGTGGAGACCAACGAGTGTGCCTCAGCT CCCTGCCTGAACCACGCGGATTGCCATGACCTGCTCAACGGCTTCCAGTGCATCTGCCTG CCTGGCCTCAGCATTCGGAGCTCCCAGGAGGAGGAGCCGGTGGACCCACAGCTGATGCGC TTGGACAACATGCTTCTGGCAGAGGGTGTGGCTGGGCCCGAGAAAGGGGGCGGCTCAGCA GCAGCAGCTGCAGCCGCTGCAGCCTCTGGTGGTGGTGTGTCCCCTGACAACTCCATCGAA CACTCGGACTATCGCAGCAAACTTGCCCAGATCCGTCACATATACCACTCGGAGCTGGAG AAGTATGAGCAGGCATGTAATGAGTTCACGACCCATGTCATGAACCTGCTGAGGGAGCAG AGCCGCACCAGGCCCGTGGCCCCCAAAGAGATGGAACGCATGGTGAGCATCATCCATCGA AAGTTCAGCGCCATCCAGATGCAGCTGAAGCAGAGCACCTGCGAGGCTGTGATGATCCTG CGCTCCCGTTTCCTGGATGCCAGACGAAAGCGCCGTAACTTCAGCAAACAGGCCACTGAG GTCCTAAATGAGTATTTCTACTCCCACCTGAGTAACCCATATCCTAGTGAGGAGGCCAAG GAGGAGCTTGCCAAGAAGTGTGGCATCACCGTGTCTCAGGTCTCCAACTGGTTTGGCAAC AAGAGGATTCGCTATAAGAAAAACATCGGAAAGTTCCAAGAGGAGGCAAACATCTATGCT GTCAAGACCGCCGTCCCCAGTGCCAAGTACTTCTTCAAGATGGCCTTCTACAATGGCTGG ATCCTCTTCCTGGCTGTGCTCGCCATCCCTGTGTGTGCCGTGCGAGGACGCAACGTCGAG AACATGAAGATCTTGCGTCTAATGCTGCTCCACATCAAATACCTGTACGGGATCCGAGTG GAGCCCTATGTTGTTGTCTCCAACCACCAGAGCTCTCTCGATCTGCTTGGGATGATGGAG GTACTGCCAGGCCGCTGTGTGCCCATTGCCAAGCGCGAGCTACTGTGGGCTGGCTCTGCC GGGCTGGCCTGCTGGCTGGCAGGAGTCATCTTCATCGACCGGAAGCGCACGGGGGATGCC ATCAGTGTCATGTCTGAGGTCGCCCAGACCCTGCTCACCCAGGACGTTCCCATTGTCCCC ATAGTCATGTCCTCCTACCAAGACTTCTACTGCAAGAAGGAGCGTCGCTTCACCTCGGGA CAATGTCAGGTGCGGGTGCTGCCCCCAGTGCCCACGGAAGGGCTGACACCAGATGACGTC CCAGCTCTGGCTGACAGAGTCCGGCACTCCATGCTCACTGTTTTCCGGGAAATCTCCACT GATGGCCGGGGTGGTGGTGACTATCTGAAGAAGCCTGGGGGCGGTGGGTGA >chr6_cox_hap1_74|SGP_v1.0_predicted_protein_74|477_AA MSPGLEGQLCEVETNECASAPCLNHADCHDLLNGFQCICLPGLSIRSSQEEEPVDPQLMR LDNMLLAEGVAGPEKGGGSAAAAAAAAASGGGVSPDNSIEHSDYRSKLAQIRHIYHSELE KYEQACNEFTTHVMNLLREQSRTRPVAPKEMERMVSIIHRKFSAIQMQLKQSTCEAVMIL RSRFLDARRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGN KRIRYKKNIGKFQEEANIYAVKTAVPSAKYFFKMAFYNGWILFLAVLAIPVCAVRGRNVE NMKILRLMLLHIKYLYGIRVEPYVVVSNHQSSLDLLGMMEVLPGRCVPIAKRELLWAGSA GLACWLAGVIFIDRKRTGDAISVMSEVAQTLLTQDVPIVPIVMSSYQDFYCKKERRFTSG QCQVRVLPPVPTEGLTPDDVPALADRVRHSMLTVFREISTDGRGGGDYLKKPGGGG* # Gene 75 (Reverse). 13 exons. 517 aa. Score = 31.52 Terminal 3660667 3660672 -7.52 - 0 0 0.00 3.42 0.00 -1.05 AA 516:517 chr6_cox_hap1_75 Internal 3668349 3669085 9.36 - 2 0 5.16 0.77 45.16 -257.95 AA 270:515 chr6_cox_hap1_75 Internal 3698676 3698699 1.70 - 2 1 4.83 3.72 2.07 -8.40 AA 262:270 chr6_cox_hap1_75 Internal 3705679 3705699 2.08 - 2 1 4.42 4.86 1.40 -7.35 AA 255:262 chr6_cox_hap1_75 Internal 3710522 3710542 5.14 - 2 1 4.17 7.00 1.55 -7.35 AA 248:255 chr6_cox_hap1_75 Internal 3710997 3711017 2.38 - 2 1 2.70 5.87 2.41 -7.35 AA 241:248 chr6_cox_hap1_75 Internal 3724475 3724495 2.50 - 2 1 4.04 4.36 2.67 -7.35 AA 234:241 chr6_cox_hap1_75 Internal 3729855 3729875 2.04 - 2 1 5.30 3.93 1.42 -7.35 AA 227:234 chr6_cox_hap1_75 Internal 3740909 3740929 4.19 - 2 1 6.09 3.85 2.21 -7.35 AA 220:227 chr6_cox_hap1_75 Internal 3742690 3742722 4.37 - 2 1 3.23 6.71 2.93 -11.55 AA 209:220 chr6_cox_hap1_75 Internal 3770744 3771091 0.14 - 2 1 1.83 3.26 20.48 -121.80 AA 93:209 chr6_cox_hap1_75 Internal 3776475 3776495 5.60 - 2 1 4.98 5.39 2.76 -7.35 AA 86: 93 chr6_cox_hap1_75 First 3777625 3777880 -0.47 - 0 1 2.65 0.89 16.56 -89.60 AA 1: 86 chr6_cox_hap1_75 >chr6_cox_hap1_75|SGP_v1.0_predicted_cDNA_75|1551_NN ATGGAGGGACCTGGGGAGAGTGGAGTCCAGCTTGTGTGCACTGCAAGGGGCTGGTTCCCA GAGCCCCAGGTGTATTGGGAAGACATCCGGGGAGAGAAGCTGCTGGCCGTGTCTGAGCAT CGCATCCAAGATAAAGATGGCCTGTTCTATGCGGAAGCCACCCTGGTGGTCAGGAACGCC TCTGCAGAGTCTGTGTCCTGCTTGGTCCACAACCCCGTCCTCACTGAGGAGAAGGGGTCG GTCATCAGCCTCCCAGAGAAACTCCAGACTGAGCTGGCTTCTTTAAAAGTGAATGGACCT TCCCAGCCCATCCTCGTCAGAGTGGGAGAAGATATACAGCTAACCTGTTACCTGTCCCCC AAGGCGAATGCACAGAGCATGGAGGTGAGGTGGGACCGATCCCACCGTTACCCTGCTGTG CATGTGTATATGGATGGGGACCATGTGGCTGGAGAGCAGATGGCAGAGTACAGAGGGAGG ACTGTACTGGTGAGTGACGCCATTGACGAGGGCAGACTGACCCTGCAGATACTCAGTGCC AGACCTTCGGACGACGGGCAGTACCGCTGCCTTTTTGAAAAAGATGATGTCTACCAGGAG GCCAGTTTGGATCTGAAGGTGGTAAGTGCTAGACTTCTGGACTATGAGGATGGTAGAGAC ACTTCATATGATAACCGAGCACCATCAACCAACTCTCTAGCACTGTCTCGATCAAGTATT GCCGGAGCTACAGGACCTTTCAAGCTCTCTCAAAAAACCATTGTACAATATCCTGGATCC AATGCTGGTCCACCTTCAGCACCCCGCGGTTACATGGATGAAGAACTTGCAAAAAAATCT TGTTCCAAAATCCAGATTCTAAAATGTGGAGGCACTGCAAGGTCTCAGAATAGCCGAGAA GAAAACAAGGAAGCACTAAAGAATGACATCATATTTACGAATTCTGTAGAATCCTTGAAA TCAGCACACATAAAGGAGCCAGAAAGAGAAGGAAAAGGCACTGATTTAGAGAAAGACAAA ATAGGAATGGAGGTCAAGGTAGACAGTGACGCTGGAATACCAAAAAGACAGGAAACCCAA CTAAAAATCAGTGAGATGAGTGTACCACAAGGACAGGGAGCCCAAATAAAGAAAAGTGTG TCAGATGTACCAAGAGGACAGGAGTCCCAAGTAAAGAAGAGTGAGTCAGGTGTCCCAAAA GGACAAGAAGCCCAAGTAACGAAGAGTGGGTTGGTTGTACTGAAAGGACAGGAAGCCCAG GTAGAGAAGAGTGAGATGGGTGTGCCAAGAAGACAGGAATCCCAAGTAAAGAAGAGTCAG TCTGGTGTCTCAAAGGGACAGGAAGCCCAGGTAAAGCAGAGGGAGTCAGTTGTACTGAAA GGACAGGAAGCCCAGGTAGAGAAGAGTGAGTTGAAGGTACCAAAAGGACAAGAAGGCCAA GTAGAGAAGACTGAGGCAGATGTGCCAAAGGAACAAGAGGTCCAAGAAAAGAAGAGTGAG GCAGGTGTACTGAAAGGACCAGAATCCCAAGTAAAGAACACTGAGGTATAA >chr6_cox_hap1_75|SGP_v1.0_predicted_protein_75|517_AA MEGPGESGVQLVCTARGWFPEPQVYWEDIRGEKLLAVSEHRIQDKDGLFYAEATLVVRNA SAESVSCLVHNPVLTEEKGSVISLPEKLQTELASLKVNGPSQPILVRVGEDIQLTCYLSP KANAQSMEVRWDRSHRYPAVHVYMDGDHVAGEQMAEYRGRTVLVSDAIDEGRLTLQILSA RPSDDGQYRCLFEKDDVYQEASLDLKVVSARLLDYEDGRDTSYDNRAPSTNSLALSRSSI AGATGPFKLSQKTIVQYPGSNAGPPSAPRGYMDEELAKKSCSKIQILKCGGTARSQNSRE ENKEALKNDIIFTNSVESLKSAHIKEPEREGKGTDLEKDKIGMEVKVDSDAGIPKRQETQ LKISEMSVPQGQGAQIKKSVSDVPRGQESQVKKSESGVPKGQEAQVTKSGLVVLKGQEAQ VEKSEMGVPRRQESQVKKSQSGVSKGQEAQVKQRESVVLKGQEAQVEKSELKVPKGQEGQ VEKTEADVPKEQEVQEKKSEAGVLKGPESQVKNTEV* # Gene 76 (Forward). 3 exons. 144 aa. Score = 11.31 First 3814741 3814771 -1.10 + 0 1 1.45 4.12 2.94 -10.85 AA 1: 11 chr6_cox_hap1_76 Internal 3817184 3817429 13.85 + 2 1 3.84 0.20 26.69 -86.10 AA 11: 93 chr6_cox_hap1_76 Terminal 3818492 3818646 -1.44 + 2 0 4.82 0.00 10.12 -53.20 AA 93:144 chr6_cox_hap1_76 >chr6_cox_hap1_76|SGP_v1.0_predicted_cDNA_76|432_NN ATGAGCGCTCAGGAATCATGGGCTATCAAAGAAGAACATGTGATCATCCAGGCCGAGTTC TATCTGAATCCTGACCAATCAGGCGAGTTTATGTTTGACTTTGATGGTGATGAGATTTTC CATGTGGATATGGCAAAGAAGGAGACGGTCTGGCGGCTTGAAGAATTTGGACGATTTGCC AGCTTTGAGGCTCAAGGTGCATTGGCCAACATAGCTGTGGACAAAGCCAACCTGGAAATC ATGACAAAGCGCTCCAACTATACTCCGATCACCAATGAGTTTGATGCTCCAAGCCCTCTC CCAGAGACTACAGAGAACGTGGTGTGTGCCCTGGGCCTGACTGTGGGTCTGGTGGGCATC ATTATTGGGACCATCTTCATCATCAAGGGATTGCGCAAAAGCAATGCAGCAGAACGCAGG GGGCCTCTGTAA >chr6_cox_hap1_76|SGP_v1.0_predicted_protein_76|144_AA MSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFA SFEAQGALANIAVDKANLEIMTKRSNYTPITNEFDAPSPLPETTENVVCALGLTVGLVGI IIGTIFIIKGLRKSNAAERRGPL* # Gene 77 (Reverse). 10 exons. 392 aa. Score = 59.95 Terminal 3870956 3870964 -2.51 - 0 0 0.00 6.30 0.62 -2.10 AA 390:392 chr6_cox_hap1_77 Internal 3871764 3871787 3.21 - 0 0 2.14 6.53 2.68 -8.40 AA 382:389 chr6_cox_hap1_77 Internal 3873267 3873337 -4.24 - 2 0 2.16 4.84 1.37 -24.85 AA 358:381 chr6_cox_hap1_77 Internal 3875612 3875881 18.77 - 2 1 4.07 3.34 27.36 -94.50 AA 268:358 chr6_cox_hap1_77 Internal 3909658 3909681 -0.12 - 2 1 2.18 6.09 1.06 -8.40 AA 260:268 chr6_cox_hap1_77 Internal 3939603 3939872 24.78 - 2 1 4.72 3.56 30.78 -94.50 AA 170:260 chr6_cox_hap1_77 Internal 3947867 3947967 -3.64 - 1 1 3.64 3.66 3.30 -35.35 AA 136:170 chr6_cox_hap1_77 Internal 3981638 3981665 -3.91 - 2 2 2.23 3.72 1.05 -9.80 AA 127:136 chr6_cox_hap1_77 Internal 4014543 4014812 27.51 - 2 1 4.72 1.61 34.94 -94.50 AA 37:127 chr6_cox_hap1_77 First 4016251 4016359 0.11 - 0 1 4.82 -1.27 9.85 -38.15 AA 1: 37 chr6_cox_hap1_77 >chr6_cox_hap1_77|SGP_v1.0_predicted_cDNA_77|1176_NN ATGTCTTGGAAAAAGGCTTTGCGGATCCCCGGAGGCCTTCGGGCAGCAACTGTGACCTTG ATGCTGTCGATGCTGAGCACCCCAGTGGCTGAGGGCAGAGACTCTCCCGAGGATTTCGTG TACCAGTTTAAGGGCATGTGCTACTTCACCAACGGGACAGAGCGCGTGCGTCTTGTGAGC AGAAGCATCTATAACCGAGAAGAGATCGTGCGCTTCGACAGCGACGTGGGGGAGTTCCGG GCGGTGACGCTGCTGGGGCTGCCTGCCGCCGAGTACTGGAACAGCCAGAAGGACATCCTG GAGAGGAAACGGGCGGCGGTGGACAGGGTGTGCAGACACAACTACCAGTTGGAGCTCCGC ACGACCTTGCAGCGGCGAGATATACTGGATGTTCATCAGCCAGGCTGCATGGTGTGTCTG AGGCTCCCTGGAGGCTCCTGCATGGCAGTTCTGACAGTGACACTGATGGTGCTGAGCTCC CCACTGGCTTTGGCTGGGGACACCAGACCACGTTTCTTGGAGTACTCTACGTCTGAGTGT CATTTCTTCAATGGGACGGAGCGGGTGCGGTACCTGGACAGATACTTCCATAACCAGGAG GAGAACGTGCGCTTCGACAGCGACGTGGGGGAGTTCCGGGCGGTGACGGAGCTGGGGCGG CCTGATGCCGAGTACTGGAACAGCCAGAAGGACCTCCTGGAGCAGAAGCGGGGCCGGGTG GACAACTACTGCAGACACAACTACGGGGTTGTGGAGAGCTTCACAGTGCAGCGGCGAGGA CACTCTGGACTTCACCCAAAAGCACGTTTCTTGGAGCTGCGTAAGTCTGAGTGTCATTTC TTCAATGGGACGGAGCGGGTGCGGTACCTGGACAGATACTTCCATAACCAGGAGGAGTTC CTGCGCTTCGACAGCGACGTGGGGGAGTACCGGGCGGTGACGGAGCTGGGGCGGCCTGTC GCCGAGTCCTGGAACAGCCAGAAGGACCTCCTGGAGCAGAAGCGGGGCCGGGTGGACAAT TACTGCAGACACAACTACGGGGTTGGTGAGAGCTTCACAGTGCAGCGGCGAGTCCATCCT CAGGTGACTGTGTATCCTGCAAAGACCCAGCCCCTGCAGCACCACAACCTCCTGGTCTGC TCTGACACTCTGGACTTCAGCCAACAGGATTCCTGA >chr6_cox_hap1_77|SGP_v1.0_predicted_protein_77|392_AA MSWKKALRIPGGLRAATVTLMLSMLSTPVAEGRDSPEDFVYQFKGMCYFTNGTERVRLVS RSIYNREEIVRFDSDVGEFRAVTLLGLPAAEYWNSQKDILERKRAAVDRVCRHNYQLELR TTLQRRDILDVHQPGCMVCLRLPGGSCMAVLTVTLMVLSSPLALAGDTRPRFLEYSTSEC HFFNGTERVRYLDRYFHNQEENVRFDSDVGEFRAVTELGRPDAEYWNSQKDLLEQKRGRV DNYCRHNYGVVESFTVQRRGHSGLHPKARFLELRKSECHFFNGTERVRYLDRYFHNQEEF LRFDSDVGEYRAVTELGRPVAESWNSQKDLLEQKRGRVDNYCRHNYGVGESFTVQRRVHP QVTVYPAKTQPLQHHNLLVCSDTLDFSQQDS* # Gene 78 (Reverse). 3 exons. 132 aa. Score = 37.14 Terminal 4096568 4096599 -1.29 - 2 0 0.00 4.76 4.33 -10.15 AA 122:132 chr6_cox_hap1_78 Internal 4111667 4111933 37.28 - 2 1 4.53 3.54 39.99 -93.45 AA 33:122 chr6_cox_hap1_78 First 4113381 4113477 1.16 - 0 1 2.16 2.92 8.33 -33.95 AA 1: 33 chr6_cox_hap1_78 >chr6_cox_hap1_78|SGP_v1.0_predicted_cDNA_78|396_NN ATGGCTCTGCAGATCCCTGGAGGCTTTTGGGCAGCAGCTGTGACCGTGATGCTGGTGATG CTGAGCACCCCAGTGGCTGAGGCCAGAGACTTTCCCAAGGATTTCTTGGTCCAGTTTAAG GGCATGTGCTACTTCACCAACGGGACAGAGCGCGTGCGCGGTGTGGCCAGATACATCTAT AACCGCGAGGAGTACGGGCGCTTCGACAGCGACGTTGGGGAGTTCCAGGCGGTGACCGAG CTGGGGCGGAGCATCGAGGACTGGAACAACTATAAGGACTTCTTGGAGCAGGAGCGGGCC GCGGTGGACAAGGTGTGCAGACACAACTACGAGGCGGAGCTGCGCACGACCTTGCAGCGG CAAGATGGTGATGCACCTGCAACAGGACAGACATGA >chr6_cox_hap1_78|SGP_v1.0_predicted_protein_78|132_AA MALQIPGGFWAAAVTVMLVMLSTPVAEARDFPKDFLVQFKGMCYFTNGTERVRGVARYIY NREEYGRFDSDVGEFQAVTELGRSIEDWNNYKDFLEQERAAVDKVCRHNYEAELRTTLQR QDGDAPATGQT* # Gene 79 (Reverse). 9 exons. 485 aa. Score = 18.34 Terminal 4144809 4144939 -1.67 - 2 0 0.00 4.20 9.47 -44.80 AA 442:485 chr6_cox_hap1_79 Internal 4163678 4163947 2.17 - 2 1 3.64 2.22 17.32 -94.50 AA 352:442 chr6_cox_hap1_79 Internal 4165495 4165586 -0.05 - 1 1 4.61 5.37 2.52 -32.20 AA 321:352 chr6_cox_hap1_79 Internal 4178547 4178722 0.72 - 0 2 0.20 3.45 13.78 -61.60 AA 263:321 chr6_cox_hap1_79 Internal 4178900 4179073 1.72 - 0 0 2.75 4.88 10.02 -60.90 AA 205:262 chr6_cox_hap1_79 Internal 4180966 4181094 3.52 - 0 0 4.50 7.26 4.59 -45.15 AA 162:204 chr6_cox_hap1_79 Internal 4181269 4181457 6.12 - 0 0 1.28 3.96 16.60 -66.15 AA 99:161 chr6_cox_hap1_79 Internal 4183787 4183992 5.57 - 2 0 4.50 4.33 13.06 -72.10 AA 30: 98 chr6_cox_hap1_79 First 4184275 4184362 0.23 - 0 1 1.39 2.91 7.72 -30.80 AA 1: 30 chr6_cox_hap1_79 >chr6_cox_hap1_79|SGP_v1.0_predicted_cDNA_79|1455_NN ATGTCTCGAATCAACTTGCGGATCCGGGAGCAGCTTTTCTCCTCCCTGCTGCGCCAGGAC CTCGGTTTCTTCCAGGAGACTAAGACAGGGGAGCTGAACTCACGGCTGAGCTCGGATACC ACCCTGATGAGTAACTGGCTTCCTTTAAATGCCAATGTGCTCTTGCGAAGCCTGGTGAAA GTGGTGGGGCTGTATGGCTTCATGCTCAGCATATCGCCTCGACTCACCCTCCTTTCTCTG CTGCACATGCCCTTCACAATAGCAGCGGAGAAGGTGTACAACACCCGCCATCAGGAAGTG CTTCGGGAGATCCAGGATGCAGTGGCCAGGGCGGGGCAGGTGGTGCGGGAAGCCGTTGGA GGGCTGCAGACCGTTCGCAGTTTTGGGGCCGAGGAGCATGAAGTCTGTCGCTATAAAGAG GCCCTTGAACAATGTCGGCAGCTGTATTGGCGGAGAGACCTGGAACGCGCCTTGTACCTG CTCGTGCTGCACTTGGGGGTGCAGATGCTGATGCTGAGCTGTGGGCTGCAGCAGATGCAG GATGGGGAGCTCACCCAGGGCAGCCTGCTTTCCTTTATGATCTACCAGGAGAGCGTGGGG AGCTATGTGCAGGGGCTGACGTTTACCCTACGTCCTGGTGAGGTGACGGCGCTGGTGGGA CCCAATGGGTCTGGGAAGAGCACAGTGGCTGCCCTGCTGCAGAATCTGTACCAGCCCACA GGGGGACAGGTGCTGCTGGATGAAAAGCCCATCTCACAGTATGAACACTGCTACCTGCAC AGCCAGGTGGTTTCAGTTGGGCAGGAGCCTGTGCTGTTCTCCGGTTCTGTGAGGAACAAC ATTGCTTATGGGCTGCAGAGCTGCGAAGATGATAAGGTGATGGCGGCTGCCCAGGCTGCC CACGCAGATGACTTCATCCAGGAAATGGAGCATGGAATATACACAGGTATCTTCTACAAA TTAATGGGTTCTGGGTGGGTCCCCTGGGTGGTGGCTCTGCTAGTGAATCTGACCCGACTG GATTCCTCCATGACTCAAGGCACAGACTCTCCAGAAGACTTTGTGATTCAGGCAAAGGCT GACTGTTACTTCACCAACGGGACAGAAAAGGTGCAGTTTGTGGTCAGATTCATCTTTAAC TTGGAGGAGTATGTACGTTTCGACAGTGATGTGGGGATGTTTGTGGCATTGACCAAGCTG GGGCAGCCAGATGCTGAGCAGTGGAACAGCCGGCTGGATCTCTTGGAGAGGAGCAGACAG GCCGTGGATGGGGTCTGTAGACACAACTACAGGCTGGGCGCACCCTTCACTGTGGGGAGA AAAGGTAATCCTCTTACTCTGGGCTATGAACTTGCTACTGCCAAGATGGATGCCATGAAA AAAAGAGATCTCATCAAAATGGTCAGAGAGATGGAGGGCCTCTGTGTAGATGGCAGGGTG GTGGTGGCCGTGTAA >chr6_cox_hap1_79|SGP_v1.0_predicted_protein_79|485_AA MSRINLRIREQLFSSLLRQDLGFFQETKTGELNSRLSSDTTLMSNWLPLNANVLLRSLVK VVGLYGFMLSISPRLTLLSLLHMPFTIAAEKVYNTRHQEVLREIQDAVARAGQVVREAVG GLQTVRSFGAEEHEVCRYKEALEQCRQLYWRRDLERALYLLVLHLGVQMLMLSCGLQQMQ DGELTQGSLLSFMIYQESVGSYVQGLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPT GGQVLLDEKPISQYEHCYLHSQVVSVGQEPVLFSGSVRNNIAYGLQSCEDDKVMAAAQAA HADDFIQEMEHGIYTGIFYKLMGSGWVPWVVALLVNLTRLDSSMTQGTDSPEDFVIQAKA DCYFTNGTEKVQFVVRFIFNLEEYVRFDSDVGMFVALTKLGQPDAEQWNSRLDLLERSRQ AVDGVCRHNYRLGAPFTVGRKGNPLTLGYELATAKMDAMKKRDLIKMVREMEGLCVDGRV VVAV* # Gene 80 (Reverse). 8 exons. 340 aa. Score = 20.07 Terminal 4189591 4189679 2.64 - 2 0 0.00 5.08 9.60 -30.10 AA 311:340 chr6_cox_hap1_80 Internal 4190163 4190367 5.14 - 0 1 0.30 2.71 19.13 -71.75 AA 243:311 chr6_cox_hap1_80 Internal 4190766 4190895 1.24 - 1 0 2.79 3.22 9.32 -45.50 AA 199:242 chr6_cox_hap1_80 Internal 4191304 4191415 6.87 - 2 2 5.21 3.95 9.08 -39.20 AA 162:199 chr6_cox_hap1_80 Internal 4191574 4191721 -1.99 - 0 1 1.26 3.92 8.76 -51.80 AA 113:162 chr6_cox_hap1_80 Internal 4197622 4197750 3.00 - 0 0 3.66 5.38 7.21 -45.15 AA 70:112 chr6_cox_hap1_80 Internal 4198952 4199149 7.21 - 0 0 -0.09 3.39 19.98 -69.30 AA 4: 69 chr6_cox_hap1_80 First 4199765 4199773 -4.04 - 0 0 0.69 3.47 0.91 -3.15 AA 1: 3 chr6_cox_hap1_80 >chr6_cox_hap1_80|SGP_v1.0_predicted_cDNA_80|1020_NN ATGTCTCGGTTGCTGGAAGTGCAGGTGCGGGAATCTCTGGCAAAGTCCAGCCAGGTGGCC ATTGAGGCTCTGTCGGCCATGCCTACAGTTCGAAGCTTTGCCAACGAGGAGGGCGAAGCC CAGAAGTTTAGGGAAAAGCTGCAAGAAATAAAGACACTCAACCAGAAGGAGGCTGTGGCC TATGCAGTCAACTCCTGGACCACTAGTATTTCAGGTATGCTGCTGAAAGTGGGAATCCTC TACATTGGTGGGCAGCTGGTGACCAGTGGGGCTGTAAGCAGTGGGAACCTTGTCACATTT GTTCTCTACCAGATGCAGTTCACCCAGGCTGTGGAGCCCACAGAATTCTTCCAGTCCCTG GGTGGGGACGGAGAAAGGAACGTTCAGATTGAGATGGCCCATGGCACCACCACGCTCGCC TTCAAGTTCCAGCATGGAGTGATTGCAGCAGTGGATTCTCGGGCCTCAGCTGGGTCCTAC ATTAGTGCCTTACGGGTGAACAAGGTGATTGAGATTAACCCTTACCTGCTTGGCACCATG TCTGGCTGTGCAGCAGACTGTCAGTACTGGGAGCGCCTGCTGGCCAAGGAATGCAGGCTG TACTATCTGCGAAATGGAGAACGTATTTCAGTGTCGGCAGCCTCCAAGCTGCTGTCCAAC ATGATGTGCCAGTACCGGGGCATGGGCCTCTCTATGGGCAGTATGATCTGTGGCTGGGAT AAGAAGGGTCCTGGACTCTACTACGTGGATGAACATGGGACTCGGCTCTCAGGAAATATG TTCTCCACGGGTAGTGGGAACACTTATGCCTACGGGGTCATGGACAGTGGCTATCGGCCT AATCTTAGCCCTGAAGAGGCCTATGACCTTGGCCGCAGGGCTATTGCTTATGCCACTCAC AGAGACAGCTATTCTGGAGGCGTTGTCAATATGTACCACATGAAGGAAGATGGTTGGGTG AAAGTAGAAAGTACAGATGTCAGTGACCTGCTGCACCAGTACCGGGAAGCCAATCAATAA >chr6_cox_hap1_80|SGP_v1.0_predicted_protein_80|340_AA MSRLLEVQVRESLAKSSQVAIEALSAMPTVRSFANEEGEAQKFREKLQEIKTLNQKEAVA YAVNSWTTSISGMLLKVGILYIGGQLVTSGAVSSGNLVTFVLYQMQFTQAVEPTEFFQSL GGDGERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTM SGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWD KKGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATH RDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREANQ* # Gene 81 (Forward). 5 exons. 197 aa. Score = 10.53 First 4204779 4204837 1.62 + 0 2 2.11 3.51 6.23 -20.65 AA 1: 20 chr6_cox_hap1_81 Internal 4205895 4206026 9.74 + 1 2 2.75 2.09 17.29 -46.20 AA 20: 64 chr6_cox_hap1_81 Internal 4206637 4206766 1.90 + 1 0 4.36 4.39 6.78 -45.50 AA 64:107 chr6_cox_hap1_81 Internal 4206996 4207137 0.32 + 0 1 0.84 2.02 12.73 -49.70 AA 108:155 chr6_cox_hap1_81 Terminal 4208037 4208164 -3.05 + 2 0 1.18 0.00 11.65 -43.75 AA 155:197 chr6_cox_hap1_81 >chr6_cox_hap1_81|SGP_v1.0_predicted_cDNA_81|591_NN ATGGCAGTGGAGTTTGACGGGGGCGTTGTGATGGGTTCTGATTCCCGAGTGTCTGCAGGC GAGGCGGTGGTGAACCGAGTGTTTGACAAGCTGTCCCCGCTGCACGAGCGCATCTACTGT GCACTCTCTGGTTCAGCTGCTGATGCCCAAGCCGTGGCCGACATGGCCGCCTACCAGCTG GAGCTCCATGGGATAGAACTGGAGGAACCTCCACTTGTTTTGGCTGCTGCAAATGTGGTG AGAAATATCAGCTATAAATATCGAGAGGACTTGTCTGCACATCTCATGGTAGCTGGCTGG GACCAACGTGAAGGAGGTCAGGTATATGGAACCCTGGGAGGAATGCTGACTCGACAGCCT TTTGCCATTGGTGGCTCCGGCAGCACCTTTATCTATGGTTATGTGGATGCAGCATATAAG CCAGGCATGTCTCCCGAGGAGTGCAGGCGCTTCACCACAGACGCTATTGCTCTGGCCATG AGCCGGGATGGCTCAAGCGGGGGTGTCATCTACCTGGTCACTATTACAGCTGCCGGTGTG GACCATCGAGTCATCTTGGGCAATGAACTGCCAAAATTCTATGATGAGTGA >chr6_cox_hap1_81|SGP_v1.0_predicted_protein_81|197_AA MAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQAVADMAAYQL ELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQREGGQVYGTLGGMLTRQP FAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVIYLVTITAAGV DHRVILGNELPKFYDE* # Gene 82 (Reverse). 1 exons. 206 aa. Score = 41.03 Single 4227848 4228465 41.03 - 0 0 0.00 5.15 63.21 -215.25 AA 1:206 chr6_cox_hap1_82 >chr6_cox_hap1_82|SGP_v1.0_predicted_cDNA_82|618_NN ATGGCGGCCTCCACGGCCTCGCAACGGCCCCTCAAGGGGATCCTGAAGGACAACACCTCT ACGACTTCCTCTATGGTGGCGTCGGCCGAACATCCCCGTGGGAGTGTCCACGAGCAGCTG AGCAAAAAATCCCAGAAGTGGGATGAAATGAACATCCTGGCGACATATCGTCCAGCAGAC AAAGACTATGGTTTAATGAAAATAGATGAACCAAGCACTCCTTACCATAGTACGATGGGT GATGATGAAGATGCATGTAGTGATACAGAAACCACTGAAGCTATGGCAACAGATAGCTTG GCTAAGAACTTAGCTGCTGCTGAAGGCTTGGAGCCAAAGTATCAGGTTCAGGAACAAGAA AGCAGTGGAGAGGAGGATAGTGACCTCTCACCTGAAGAACGAGAAAAAAAGCGACAATTT GAAATGAGAAGGACGCTTCACTACAATGAAGGACTCAATATCAAACTAGCTAGACAATTA ATTTCAAAAGACCTACACGATGATGACAAAGTTGAAGAAATGTTAGAGACTGCACATGGA GAAAGCATGAATACGGAAGAATCAAATCAAGGATCTACTGCAAGTGACCAACAGCAAAAT AAATCACGAAGTTCATAG >chr6_cox_hap1_82|SGP_v1.0_predicted_protein_82|206_AA MAASTASQRPLKGILKDNTSTTSSMVASAEHPRGSVHEQLSKKSQKWDEMNILATYRPAD KDYGLMKIDEPSTPYHSTMGDDEDACSDTETTEAMATDSLAKNLAAAEGLEPKYQVQEQE SSGEEDSDLSPEEREKKRQFEMRRTLHYNEGLNIKLARQLISKDLHDDDKVEEMLETAHG ESMNTEESNQGSTASDQQQNKSRSS* # Gene 83 (Reverse). 4 exons. 129 aa. Score = 2.54 Terminal 4289327 4289331 -3.72 - 2 0 0.00 5.55 0.00 -0.70 AA 128:129 chr6_cox_hap1_83 Internal 4299152 4299436 3.87 - 2 1 1.58 5.33 17.78 -99.75 AA 33:128 chr6_cox_hap1_83 Internal 4319176 4319237 -1.76 - 1 1 3.94 4.49 0.80 -21.70 AA 12: 33 chr6_cox_hap1_83 First 4320896 4320930 4.14 - 0 2 3.24 2.66 5.86 -12.25 AA 1: 12 chr6_cox_hap1_83 >chr6_cox_hap1_83|SGP_v1.0_predicted_cDNA_83|387_NN ATGGCGGCCCCGGACGACTCGAAGGCTCTGTATCGGGAGAAAACAAACTTGTGTACGTAT CTGGGAAAAATAATCAACGTAGGTGAACAAATATACGCTCCTACTCCAATGTGGCCAGAT GACCTGCAAAACCACACATTCCTGCACACAGTGTACTGCCAGGATGGGAGTCCCAGTGTG GGACTCTCTGAGGCCTACGACGAGGACCAGCTTTTCTTCTTCGACTTTTCCCAGAACACT CGGGTGCCTCGCCTGCCCGAATTTGCTGACTGGGCTCAGGAACAGGGAGATGCTCCTGCC ATTTTATTTGACAAAGAGTTCTGCGAGTGGATGATCCAGCAAATAGGGCCAAAACTTGAT GGGAAAATCCCGGTGTCCAGAGGGTAA >chr6_cox_hap1_83|SGP_v1.0_predicted_protein_83|129_AA MAAPDDSKALYREKTNLCTYLGKIINVGEQIYAPTPMWPDDLQNHTFLHTVYCQDGSPSV GLSEAYDEDQLFFFDFSQNTRVPRLPEFADWAQEQGDAPAILFDKEFCEWMIQQIGPKLD GKIPVSRG* # Gene 84 (Forward). 10 exons. 598 aa. Score = 38.15 First 4323216 4323407 3.27 + 0 0 2.81 4.32 11.85 -67.20 AA 1: 64 chr6_cox_hap1_84 Internal 4324028 4324165 4.78 + 0 0 3.46 4.42 10.23 -48.30 AA 65:110 chr6_cox_hap1_84 Internal 4324675 4324813 3.73 + 0 1 3.55 3.03 10.95 -48.65 AA 111:157 chr6_cox_hap1_84 Internal 4324894 4325108 -1.64 + 2 0 6.18 2.68 8.56 -75.25 AA 157:228 chr6_cox_hap1_84 Internal 4325206 4325580 0.99 + 0 0 5.87 2.10 18.86 -131.25 AA 229:353 chr6_cox_hap1_84 Internal 4326086 4326214 15.32 + 0 0 4.06 4.94 16.24 -45.15 AA 354:396 chr6_cox_hap1_84 Internal 4326770 4326968 1.33 + 0 1 5.71 -1.45 14.67 -69.65 AA 397:463 chr6_cox_hap1_84 Internal 4328523 4328780 8.49 + 2 1 3.06 2.24 21.61 -90.30 AA 463:549 chr6_cox_hap1_84 Internal 4328990 4329112 7.06 + 2 1 1.35 5.20 12.65 -43.05 AA 549:590 chr6_cox_hap1_84 Terminal 4329341 4329366 -5.18 + 2 0 4.17 0.00 1.49 -8.05 AA 590:598 chr6_cox_hap1_84 >chr6_cox_hap1_84|SGP_v1.0_predicted_cDNA_84|1794_NN ATGGCTTCGGTGCCTGCTTTGCAACTTACCCCTGCCAACCCACCACCCCCGGAGGTGTCC AATCCCAAAAAGCCAGGACGAGTTACCAACCAGCTGCAATACCTACACAAGGTAGTGATG AAGGCTCTGTGGAAACATCAGTTCGCATGGCCATTCCGGCAGCCTGTGGATGCTGTCAAA CTGGGTCTACCGGATTATCACAAAATTATAAAACAGCCTATGGACATGGGTACTATTAAG AGGAGACTTGAAAACAATTATTATTGGGCTGCTTCAGAGTGTATGCAAGATTTTAATACC ATGTTCACCAACTGTTACATTTACAACAAGCCCACTGATGATATTGTCCTAATGGCACAA ACGCTGGAAAAGATATTCCTACAGAAGGTTGCATCAATGCCACAAGAAGAACAAGAGCTG GTAGTGACCATCCCTAAGAACAGCCACAAGAAGGGGGCCAAGTTGGCAGCGCTCCAGGGC AGTGTTACCAGTGCCCATCAGGTGCCTGCCGTCTCTTCTGTGTCACACACAGCCCTCTAT ACTCCTCCACCTGAGATACCTACCACTGTCCTCAACATTCCCCACCCATCAGTCATTTCC TCTCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCCGCTCCTTGCTGTTACTGCAGCT CCTCCAGCCCAGCCCCTTGCCAAGAAAAAAGGCGTAAAGCGGAAAGCAGATACTACCACC CCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCCTGGGAGTCTTGAG CCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCCCATCAAGCCCCCA CGCAAAGACTTGCCTGACTCTCAGCAACAACACCAGAGCTCTAAGAAAGGAAAGCTTTCA GAACAGTTAAAACATTGCAATGGCATTTTGAAGGAGTTACTCTCTAAGAAGCATGCTGCC TATGCTTGGCCTTTCTATAAACCAGTGGATGCTTCTGCACTTGGCCTGCATGACTACCAT GACATCATTAAGCACCCCATGGACCTCAGCACTGTCAAGCGGAAGATGGAGAACCGTGAT TACCGGGATGCACAGGAGTTTGCTGCTGATGTACGGCTTATGTTCTCCAACTGCTATAAG TACAATCCCCCAGATCACGATGTTGTGGCAATGGCACGAAAGCTACAGCTTCGGGCAGTA CATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAGGAAAAGAGAG AAAAAAGAGAAAAAGAAGAAACGGAAGGCAGAGAAGCATCGAGGCCGAGCTGGGGCCGAT GAAGATGACAAGGGGCCTAGGGCACCCCGCCCACCTCAACCTAAGAAGTCCAAGAAAGCA AGTGGCAGTTATGATTCAGAGGAGGAGGAAGAGAGCAGGCCCATGAGTTACGATGAGAAG CGGCAGCTGAGCCTGGACATCAACAAATTACCTGGGGAGAAGCTGGGCCGAGTTGTGCAT ATAATCCAAGCCAGGGAGCCCTCTTTACGTGATTCAAACCCAGAAGAGATTGAGATTGAT TTTGAAACACTCAAGCCATCCACACTTAGAGAGCTTGAGCGCTATGTCCTTTCCTGCCTA CGTAAGAAACCCCGGAAGCCCTACACCATTAAGAAGCCTGTGGGAAAGACAAAGGAGGAA CTGGCTTTGGAGAAAAAGCGGGAATTAGAAAAGCGGTTACAAGATGTCAGCGGACAGCTC AATTCTACTAAAAAGCCCCCCAAGAAAGACACCAGTGATTCAGACTCAGGCTAA >chr6_cox_hap1_84|SGP_v1.0_predicted_protein_84|598_AA MASVPALQLTPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVK LGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQ TLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSVTSAHQVPAVSSVSHTALY TPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVTAAPPAQPLAKKKGVKRKADTTT PTPTAILAPGSPASPPGSLEPKAARLPPMRRESGRPIKPPRKDLPDSQQQHQSSKKGKLS EQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQLRAVHEQLAALSQGPISKPKRKRE KKEKKKKRKAEKHRGRAGADEDDKGPRAPRPPQPKKSKKASGSYDSEEEEESRPMSYDEK RQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCL RKKPRKPYTIKKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKDTSDSDSG* # Gene 85 (Reverse). 4 exons. 224 aa. Score = 55.75 Terminal 4335895 4335907 -0.20 - 1 0 0.00 8.32 0.26 -3.50 AA 220:224 chr6_cox_hap1_85 Internal 4355681 4355816 7.72 - 2 2 0.21 5.60 14.20 -47.60 AA 175:220 chr6_cox_hap1_85 Internal 4355912 4356193 17.82 - 2 1 1.80 0.41 32.63 -98.70 AA 81:175 chr6_cox_hap1_85 First 4356614 4356854 30.41 - 0 1 2.11 0.82 38.31 -84.35 AA 1: 81 chr6_cox_hap1_85 >chr6_cox_hap1_85|SGP_v1.0_predicted_cDNA_85|672_NN ATGGGCTCCTACGGACCCGCCTTCTACCAGTCTTACGGCGCCTCGGGCCAGTTCACCCAT GAATTTGATGAGGAACAGCTGTTCTCTGTGGACCTGAAGAAAAGCGAGGCCGTGTGGCGT CTGCCTGAGTTTGGCGACTTTGCCCGCTTTGACCCGCAGGGCGGGCTGGCCGGCATCGCC GCAATCAAAGCCCATCTGGACATCCTGGTGGAGCGCTCCAACCGCAGCAGAGCCATCAAC GTGCCTCCACGGGTGACCGTGCTCCCCAAGTCTCGGGTGGAGCTGGGCCAGCCCAACATC CTCATCTGCATCGTGGACAACATCTTCCCCCCTGTGATCAATATCACCTGGCTGCGCAAC GGCCAAACTGTCACTGAGGGAGTGGCCCAGACCAGCTTCTATTCCCAGCCTGACCATTTG TTCCGCAAGTTCCACTACCTGCCCTTCGTGCCCTCAGCCGAGGACGTCTATGACTGCCAG GTGGAGCACTGGGGCCTGGATGCGCCACTCCTCAGGCATTGGGAGCTCCAGGTGCCTATT CCACCACCAGATGCCATGGAGACCCTGGTCTGTGCCCTGGGCCTGGCCATCGGCCTGGTG GGCTTCCTCGTGGGCACCGTCCTCATCATCATGGGCACATATGTGTCCAGTGTCCCCAGG AACTCTGGGTGA >chr6_cox_hap1_85|SGP_v1.0_predicted_protein_85|224_AA MGSYGPAFYQSYGASGQFTHEFDEEQLFSVDLKKSEAVWRLPEFGDFARFDPQGGLAGIA AIKAHLDILVERSNRSRAINVPPRVTVLPKSRVELGQPNILICIVDNIFPPVINITWLRN GQTVTEGVAQTSFYSQPDHLFRKFHYLPFVPSAEDVYDCQVEHWGLDAPLLRHWELQVPI PPPDAMETLVCALGLAIGLVGFLVGTVLIIMGTYVSSVPRNSG* # Gene 86 (Reverse). 4 exons. 261 aa. Score = 14.70 Terminal 4416934 4417088 0.43 - 2 0 0.00 4.78 11.16 -53.20 AA 210:261 chr6_cox_hap1_86 Internal 4417303 4417584 2.57 - 2 1 1.02 5.03 17.64 -98.70 AA 116:210 chr6_cox_hap1_86 Internal 4417925 4418170 13.65 - 2 1 3.32 4.15 22.39 -86.10 AA 34:116 chr6_cox_hap1_86 First 4421755 4421854 -1.95 - 0 1 3.29 1.05 7.02 -35.00 AA 1: 34 chr6_cox_hap1_86 >chr6_cox_hap1_86|SGP_v1.0_predicted_cDNA_86|783_NN ATGCGCCCTGAAGACAGAATGTTCCATATCAGAGCTGTGATCTTGAGAGCCCTCTCCTTG GCTTTCCTGCTGAGTCTCCGAGGAGCTGGGGCCATCAAGGCGGACCATGTGTCAACTTAT GCCGCGTTTGTACAGACGCATAGACCAACAGGGGAGTTTATGTTTGAATTTGATGAAGAT GAGATGTTCTATGTGGATCTGGACAAGAAGGAGACCGTCTGGCATCTGGAGGAGTTTGGC CAAGCCTTTTCCTTTGAGGCTCAGGGCGGGCTGGCTAACATTGCTATATTGAACAACAAC TTGAATACCTTGATCCAGCGTTCCAACCACACTCAGGCCACCAACGATCCCCCTGAGGTG ACCGTGTTTCCCAAGGAGCCTGTGGAGCTGGGCCAGCCCAACACCCTCATCTGCCACATT GACAAGTTCTTCCCACCAGTGCTCAACGTCACGTGGCTGTGCAACGGGGAGCTGGTCACT GAGGGTGTCGCTGAGAGCCTCTTCCTGCCCAGAACAGATTACAGCTTCCACAAGTTCCAT TACCTGACCTTTGTGCCCTCAGCAGAGGACTTCTATGACTGCAGGGTGGAGCACTGGGGC TTGGACCAGCCGCTCCTCAAGCACTGGGAGGCCCAAGAGCCAATCCAGATGCCTGAGACA ACGGAGACTGTGCTCTGTGCCCTGGGCCTGGTGCTGGGCCTAGTCGGCATCATCGTGGGC ACCGTCCTCATCATAAAGTCTCTGCGTTCTGGCCATGACCCCCGGGCCCAGGGGACCCTG TGA >chr6_cox_hap1_86|SGP_v1.0_predicted_protein_86|261_AA MRPEDRMFHIRAVILRALSLAFLLSLRGAGAIKADHVSTYAAFVQTHRPTGEFMFEFDED EMFYVDLDKKETVWHLEEFGQAFSFEAQGGLANIAILNNNLNTLIQRSNHTQATNDPPEV TVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGELVTEGVAESLFLPRTDYSFHKFH YLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG TVLIIKSLRSGHDPRAQGTL* # Gene 87 (Forward). 4 exons. 197 aa. Score = 63.47 First 4424383 4424425 -6.44 + 0 1 0.14 4.38 0.41 -15.05 AA 1: 15 chr6_cox_hap1_87 Internal 4428955 4429218 36.75 + 2 1 4.59 5.16 37.60 -92.40 AA 15:103 chr6_cox_hap1_87 Internal 4465170 4465433 35.35 + 2 1 3.97 3.88 38.31 -92.40 AA 103:191 chr6_cox_hap1_87 Terminal 4476957 4476976 -2.18 + 2 0 5.78 0.00 1.60 -5.95 AA 191:197 chr6_cox_hap1_87 >chr6_cox_hap1_87|SGP_v1.0_predicted_cDNA_87|591_NN ATGGTGCTGCTCACATCTGTGGTCCAGGGCAGGGCCACTCCAGAGAATTACGTGTACCAG TTACGGCAGGAATGCTACGCGTTTAATGGGACACAGCGCTTCCTGGAGAGATACATCTAC AACCGGGAGGAGTTCGTGCGCTTCGACAGCGACGTGGGGGAGTTCCGGGCGGTGACGGAG CTGGGGCGGCCTGATGAGGACTACTGGAACAGCCAGAAGGACCTCCTGGAGGAGAAGCGG GCAGTGCCGGACAGGGTATGCAGACACAACTACGAGCTGGACGAGGCCGTGACCCTGCAG CGCCGAGAGAATTCCGTCTACCAGGAACGGCAGGAATGCTATGCGTTCAATGGGACTCAG CGCGTTGTGGACGGGCTCATCTACAACCGGGAGGAATACGTGCATTTTGACAGCGCAGTG GGGGAGTTCCTAGCAGTGATGGAGCTGGGGCGGCCCATAGGCGAGTACTTCAATAGCCAG AAGGACTTTATGGAACGGAAGCGAGCCGAGGTGGACAAGGTGTGCAGACACAAGTACGAG CTGATGGAGCCACTCATCCGGCAGCGCCGAGTTCAACAAGGATCTGCATAA >chr6_cox_hap1_87|SGP_v1.0_predicted_protein_87|197_AA MVLLTSVVQGRATPENYVYQLRQECYAFNGTQRFLERYIYNREEFVRFDSDVGEFRAVTE LGRPDEDYWNSQKDLLEEKRAVPDRVCRHNYELDEAVTLQRRENSVYQERQECYAFNGTQ RVVDGLIYNREEYVHFDSAVGEFLAVMELGRPIGEYFNSQKDFMERKRAEVDKVCRHKYE LMEPLIRQRRVQQGSA* # Gene 88 (Reverse). 15 exons. 499 aa. Score = 51.50 Terminal 4478957 4478989 -6.45 - 0 0 0.00 4.52 0.88 -10.50 AA 489:499 chr6_cox_hap1_88 Internal 4512208 4512414 1.64 - 0 0 1.70 3.20 14.21 -72.45 AA 420:488 chr6_cox_hap1_88 Internal 4512793 4512905 2.70 - 2 0 3.67 3.78 7.61 -39.55 AA 382:419 chr6_cox_hap1_88 Internal 4513490 4513757 4.36 - 0 1 1.19 2.86 20.09 -93.80 AA 293:382 chr6_cox_hap1_88 Internal 4515011 4515064 1.01 - 0 0 4.98 4.49 1.28 -18.90 AA 275:292 chr6_cox_hap1_88 Internal 4517773 4517826 3.66 - 0 0 4.98 5.80 1.76 -18.90 AA 257:274 chr6_cox_hap1_88 Internal 4524199 4524243 2.54 - 0 0 3.89 5.39 2.17 -15.75 AA 242:256 chr6_cox_hap1_88 Internal 4525121 4525165 2.59 - 0 0 5.70 4.51 1.18 -15.75 AA 227:241 chr6_cox_hap1_88 Internal 4526248 4526292 4.47 - 0 0 5.20 5.36 2.16 -15.75 AA 212:226 chr6_cox_hap1_88 Internal 4527659 4527745 1.22 - 0 0 3.29 3.39 6.11 -30.45 AA 183:211 chr6_cox_hap1_88 Internal 4533641 4533718 3.00 - 0 0 2.13 1.26 10.61 -27.30 AA 157:182 chr6_cox_hap1_88 Internal 4536302 4536464 7.76 - 1 0 2.57 4.23 14.81 -57.05 AA 102:156 chr6_cox_hap1_88 Internal 4542885 4542990 3.55 - 2 2 3.22 3.62 8.93 -37.10 AA 67:102 chr6_cox_hap1_88 Internal 4545702 4545881 16.82 - 2 1 2.72 5.20 21.01 -63.00 AA 7: 67 chr6_cox_hap1_88 First 4548180 4548198 2.63 - 0 1 3.02 4.75 1.91 -6.65 AA 1: 7 chr6_cox_hap1_88 >chr6_cox_hap1_88|SGP_v1.0_predicted_cDNA_88|1497_NN ATGGGCGACAGCGGGCGGGGCAAACACTACGGGGTTTACAGCTGTGAGGGTTGCAAGGGC TTCTTCAAACGCACCATCCGCAAAGACCTTACATACTCTTGCCGGGACAACAAAGACTGC ACAGTGGACAAGCGCCAGCGGAACCGCTGTCAGTACTGCCGCTATCAGAAGTGCCTGGCC ACTGGCATGAAGAGGGAGGATGCCAAGGGCCTCTCCAACCCTAGTGAGGTGGAGGTCCTG CGGGAGAAAGTGTATGCATCACTGGAGACCTACTGCAAACAGAAGTACCCTGAGCAGCAG GGACGGTGGCACCGTGTGGCTGTGGCTGTGAAGGGCCAGTCTGTCACCCTCATTGTTGAC TGCAAGAAGCGAGTCACCCGGCCTCTCCCCCGAAGTGCTCGTCCAGTATTGGACACCCAT GGAGTGATCATCTTTGGTGCCCGTATTCTGGATGAAGAAGTCTTTGAGCCCACTGAGTCT CTCTACTATGACTACGAGCCCCCCTATTATGATGTGATGACTACGGGGACAACCCCTGAT TATCAGTTCCGGTTTGGCAGTGGTGGGGGTGACAAGGGCCCTGTGGTGGCGGCCCAGGAG GCTCAGGCCCAGGCGATCCTGCAGCAGGCGAGGGGAGATGACGGGGAGATTGGGCCTCGA GGGCTGCCTGGAGAGTCGGGTCTTCCCGGGCCCCAGGGTGCCATCGGCCCTCATGGAGAG AAGGGTGTGGACGGAATTCGGGGTCTGAAGGGTCATAAGGGTGAGAAGGGGGAACCAGGA GAGTCAGGATCTCCAGGGATCCAGGGCGAGCCAGGTGTCAAGGGACCCCCAGGGCTGCCT GGTCTCCGGGGCGATGCTGGAGCCAAGGGAGAGAAGGGTCCCCCAGGCGAGGTGATCCAG CCACTGCCCATTCAGATGCCCAAGAAGACTCGGCGCTCGGTGGATGGAAGCCGTCTGATG CAGGAAGATGAGGCCATACCGACCGGGGGAGCCCCCGGCAGTCCTGGGGGGCTGGAGGAG ATCTTTGGCTCACTCGACTCCCTGCGGGAGGAGATCGAGCAGATGAGGCGGCCAACAGGG ACCCAGGACAGCCCTGCTCGCACCTGCCAGGACCTGAAGCTGTGCCACCCAGAGCTTCCC GATGGAGAGTACTGGGTCGACCCCAACCAGGGCTGTGCTCGGGATGCCTTCCGAGTTTTC TGCAACTTCACAGCAGGGGGTGAGACCTGTGTGACGCCTAGGGATGACGTCACGCAGTTC TCTTACGTGGACTCAGAGGGCTCCCCAGTGGGTGTGGTCCAGCTCACCTTCCTGCGGCTG CTCAGCGTCTCAGCCCACCAGGACGTCTCCTACCCCTGCTCTGGAGCAGCCCGTGACGGT CCCCTGAGACTCCGTGGGGCCAATGAGGATGAGCTGAGCCCGGAGACTAGCCCCTATGTC AAAGAATTCAGAGATGGCTGCCAGGTGTCAAACTTTCTCAGTCAGAAGTTGACATAA >chr6_cox_hap1_88|SGP_v1.0_predicted_protein_88|499_AA MGDSGRGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLA TGMKREDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRWHRVAVAVKGQSVTLIVD CKKRVTRPLPRSARPVLDTHGVIIFGARILDEEVFEPTESLYYDYEPPYYDVMTTGTTPD YQFRFGSGGGDKGPVVAAQEAQAQAILQQARGDDGEIGPRGLPGESGLPGPQGAIGPHGE KGVDGIRGLKGHKGEKGEPGESGSPGIQGEPGVKGPPGLPGLRGDAGAKGEKGPPGEVIQ PLPIQMPKKTRRSVDGSRLMQEDEAIPTGGAPGSPGGLEEIFGSLDSLREEIEQMRRPTG TQDSPARTCQDLKLCHPELPDGEYWVDPNQGCARDAFRVFCNFTAGGETCVTPRDDVTQF SYVDSEGSPVGVVQLTFLRLLSVSAHQDVSYPCSGAARDGPLRLRGANEDELSPETSPYV KEFRDGCQVSNFLSQKLT* # Gene 89 (Forward). 7 exons. 304 aa. Score = 5.06 First 4548736 4548769 -1.12 + 0 1 3.27 1.58 3.14 -11.90 AA 1: 12 chr6_cox_hap1_89 Internal 4550498 4550638 2.50 + 2 1 5.04 4.02 7.41 -49.35 AA 12: 59 chr6_cox_hap1_89 Internal 4552840 4552940 2.11 + 2 0 3.83 1.92 8.47 -35.35 AA 59: 92 chr6_cox_hap1_89 Internal 4553159 4553298 -2.23 + 0 2 4.07 -1.89 11.15 -49.00 AA 93:139 chr6_cox_hap1_89 Internal 4557849 4558064 8.11 + 1 2 2.87 0.31 21.64 -75.60 AA 139:211 chr6_cox_hap1_89 Internal 4559663 4559936 0.31 + 1 0 5.03 3.34 12.66 -95.90 AA 211:302 chr6_cox_hap1_89 Terminal 4562058 4562063 -4.62 + 0 0 4.67 0.00 0.00 -1.05 AA 303:304 chr6_cox_hap1_89 >chr6_cox_hap1_89|SGP_v1.0_predicted_cDNA_89|912_NN ATGGATTCGTCGCTACCGGAGTGCCGCCATATTGAGCGTTCTACCAAGGAGAAGCAGAGC TCAGAGGAAGAAGAAAAGGAAACAAGAGGGGTTCAGAAGAGGCGAGGAGGGAGCACAGTA CCCAAAGATGGGCCAGTGAGACCTCAGAACGCTGAAGAAGAAAAAAGAGGCTTAGGTGCG GGGAGCGGCATCGGCCGAGCGGTCAGTGTACGCCTGGCCGGAGAGGGGGCCACCGTAGCT GCCTGCGACCTGGACCGGGCAGCGGCACAGGAGACGGCCTGCTTTTCTCGCCCACCATCT GTCGTTGTGTCCTGTGCGGGCATCACCCAGGATGAGTTTCTGCTGCACATGTCTGAGGAT GACTGGGACAAAGTCATAGCTGTCAACCTCAAGGTGGCGATCTCTGAACCTGCGACGAAC AAGGAGTGTCCTACCTGCCGAAAGAAGCTGGTGTCCAAGCGATCCCTACGGCCAGACCCC AACTTTGATGCCCTGATCTCTAAGATCTATCCTAGCCGGGAGGAATACGAGGCCCATCAA GACCGAGTGCTTATCCGCCTGAGCCGCCTGCACAACCAGCAGGCATTGAGCTCCAGCATT GAGGAGGGGCTACGCATGCAGGCCATGCACAGGTATGTGAAGACAACTGGGAATGCCACA GTGGACCACCTCTCCAAGTACTTGGCCCTGCGCATTGCCCTCGAGCGGAGGCAACAGCAG GAAGCAGGGGAGCCAGGAGGGCCTGGAGGGGGCGCCTCTGACACCGGAGGACCTGATGGG TGTGGCGGGGAGGGTGGGGGTGCCGGAGGAGGTGACGGTCCTGAGGAGCCTGCTTTGCCC AGCCTGGAGGGCGTCAGTGAAAAGCAGTACACCATCTACATCGCACCTGGAGGCGGGGCG TTCACGCCCTAA >chr6_cox_hap1_89|SGP_v1.0_predicted_protein_89|304_AA MDSSLPECRHIERSTKEKQSSEEEEKETRGVQKRRGGSTVPKDGPVRPQNAEEEKRGLGA GSGIGRAVSVRLAGEGATVAACDLDRAAAQETACFSRPPSVVVSCAGITQDEFLLHMSED DWDKVIAVNLKVAISEPATNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQ DRVLIRLSRLHNQQALSSSIEEGLRMQAMHRYVKTTGNATVDHLSKYLALRIALERRQQQ EAGEPGGPGGGASDTGGPDGCGGEGGGAGGGDGPEEPALPSLEGVSEKQYTIYIAPGGGA FTP* # Gene 90 (Reverse). 6 exons. 241 aa. Score = 33.94 Terminal 4598771 4598917 1.27 - 0 0 0.00 1.83 14.64 -50.40 AA 193:241 chr6_cox_hap1_90 Internal 4611398 4611463 8.34 - 0 0 2.80 6.12 8.19 -23.10 AA 171:192 chr6_cox_hap1_90 Internal 4611686 4611793 4.62 - 0 0 0.70 6.67 9.22 -37.80 AA 135:170 chr6_cox_hap1_90 Internal 4611922 4612017 5.15 - 0 0 3.66 4.78 7.84 -33.60 AA 103:134 chr6_cox_hap1_90 Internal 4615779 4615911 9.57 - 1 0 4.15 3.48 13.75 -46.55 AA 58:102 chr6_cox_hap1_90 First 4616928 4617100 4.99 - 0 2 2.15 1.85 15.64 -60.55 AA 1: 58 chr6_cox_hap1_90 >chr6_cox_hap1_90|SGP_v1.0_predicted_cDNA_90|723_NN ATGGAGCAGATGTTGGGAGCTTTTCAGAGTGACCTCAGCTCCATCAGCTCTGAGATCCGG ACACTGCAGGAACAGTCAGGAGCCATGAACATTCGACTTCGAAATCGCCAGGCAGTTCGG GGGAAACTTGGGGAGCTTGTTGATGGTCTGGTGGTGCCTTCTGCTCTGGTCACGTTCTTC TATCAGTTTCTGCTGGGCAATGAACGAGCAACAGCAAAGGAGATCAGGGATGAATATGTG GAGACGCTGAGCAAGATTTACCTGTCTTACTACCGCTCTTACCTGGGGCGGCTCATGAAG GTGCAGATCACACGCCGCTATGCAGAGTTCTCCTCCGCTCTTGTCAGTATCAACCAGACA ATTCCTAATGAACGGACCATGCAATTGCTGGGACAGCTGCAGGTGGAGGTGGAGAATTTT GTCCTCCGAGTGGCAGCTGAGTTCTCCTCAAGGAAGGAGCAGCTTGTGTTTCTGATCAAC AACTATGACATGATGCTGGGTGTGCTGATGGAGCGGGCTGCAGATGACAGCAAAGAGGTT GAGAGCTTCCAGCAGCTGCTCAATGCTCGGACACAGGGAGCGCTGACCCAGCTGATCCAG CTCTATCATCGCTTCCACCGGGTGCTGTCCCAGCCGCAGCTCCGAGCCCTCCCTGCCCGG GCTGAGCTCATCAACATTCACCACCTTATGGTGGAGCTCAAGAAGCATAAGCCCAACTTC TGA >chr6_cox_hap1_90|SGP_v1.0_predicted_protein_90|241_AA MEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQAVRGKLGELVDGLVVPSALVTFF YQFLLGNERATAKEIRDEYVETLSKIYLSYYRSYLGRLMKVQITRRYAEFSSALVSINQT IPNERTMQLLGQLQVEVENFVLRVAAEFSSRKEQLVFLINNYDMMLGVLMERAADDSKEV ESFQQLLNARTQGALTQLIQLYHRFHRVLSQPQLRALPARAELINIHHLMVELKKHKPNF * # Gene 91 (Forward). 6 exons. 153 aa. Score = 18.20 First 4620034 4620036 -4.63 + 0 0 1.42 2.91 0.00 -1.05 AA 1: 1 chr6_cox_hap1_91 Internal 4620542 4620640 10.51 + 0 0 2.03 5.70 12.69 -34.65 AA 2: 34 chr6_cox_hap1_91 Internal 4623711 4623797 0.68 + 0 0 2.28 3.87 6.67 -30.45 AA 35: 63 chr6_cox_hap1_91 Internal 4623879 4623980 3.29 + 0 0 2.81 1.80 11.01 -35.70 AA 64: 97 chr6_cox_hap1_91 Internal 4624090 4624181 5.48 + 0 2 3.77 3.02 9.71 -32.20 AA 98:128 chr6_cox_hap1_91 Terminal 4624305 4624380 2.88 + 1 0 5.18 0.00 8.30 -25.55 AA 128:153 chr6_cox_hap1_91 >chr6_cox_hap1_91|SGP_v1.0_predicted_cDNA_91|459_NN ATGTCTCTAGTGATCCCTGAAAAGTTCCAGCATATTTTGCGAGTACTCAACACCAACATC GATGGGCGGCGGAAAATAGCCTTTGCCATCACTGCCATTAAGGGTGTGGGCCGAAGATAT GCTCATGTGGTGTTGAGGAAAGCAGACATTGACCTCACCAAGAGGGCGGGAGAACTCACT GAGGATGAGGTGGAACGTGTGATCACCATTATGCAGAATCCACGCCAGTACAAGATCCCA GACTGGTTCTTGAACAGACAGAAGGATGTAAAGGATGGAAAATACAGCCAGGTCCTAGCC AATGGTCTGGACAACAAGCTCCGTGAAGACCTGGAGCGACTGAAGAAGATTCGGGCCCAT AGAGGGCTGCGTCACTTCTGGGGCCTTCGTGTCCGAGGCCAGCACACCAAGACCACTGGC CGCCGTGGCCGCACCGTGGGTGTGTCCAAGAAGAAATAA >chr6_cox_hap1_91|SGP_v1.0_predicted_protein_91|153_AA MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH RGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK* # Gene 92 (Reverse). 11 exons. 371 aa. Score = 24.23 Terminal 4627190 4627288 -0.10 - 0 0 0.00 4.12 8.43 -33.60 AA 339:371 chr6_cox_hap1_92 Internal 4627411 4627524 2.20 - 0 0 1.15 5.58 8.09 -39.90 AA 301:338 chr6_cox_hap1_92 Internal 4628342 4628436 11.99 - 2 0 4.03 5.56 11.15 -33.25 AA 269:300 chr6_cox_hap1_92 Internal 4635009 4635144 -1.71 - 0 1 1.41 4.23 7.87 -47.60 AA 224:269 chr6_cox_hap1_92 Internal 4635273 4635423 3.23 - 1 0 1.64 6.13 9.86 -52.85 AA 173:223 chr6_cox_hap1_92 Internal 4635532 4635636 0.31 - 1 2 1.80 2.09 9.77 -36.75 AA 138:173 chr6_cox_hap1_92 Internal 4635883 4635944 5.57 - 0 2 4.19 5.08 5.58 -21.70 AA 118:138 chr6_cox_hap1_92 Internal 4636066 4636153 2.41 - 1 0 3.62 4.06 6.30 -30.80 AA 88:117 chr6_cox_hap1_92 Internal 4636276 4636388 0.20 - 0 2 4.05 0.42 9.44 -39.55 AA 51: 88 chr6_cox_hap1_92 Internal 4636532 4636612 2.64 - 0 0 3.48 5.55 4.64 -28.35 AA 24: 50 chr6_cox_hap1_92 First 4637020 4637088 -2.51 - 0 0 0.90 2.52 5.76 -24.15 AA 1: 23 chr6_cox_hap1_92 >chr6_cox_hap1_92|SGP_v1.0_predicted_cDNA_92|1113_NN ATGGAGACAGCCCCCAAGCCGGGCAAGGATGTCCCGCCCAAGAAAGACAAACTTCAGACC AAGAGAAAGGCCCAAGATCCATTCCCAGGCCCCGCCCCCGTCCCTGTGGAAGTGGTCCAG AAGTTCTGTCGCATTGACAAATCCCGAAAGCTACCACATTCTAAAGCCAAAACTCGAAGC CGACTTGAGGTGGCTGAAGCTGAGGAAGAGGAAACAAGTATCAAAGCTGCTCGTTCTGAG CTGCTGCTTGCTGAAGAACCTGGGTTTCTGGAAGGGGAGGATGGGGAAGACACAGCAAAG ATATGCCAGGCTGACATTGTGGAGGCTGTGGACATTGCAAGTGCAGCCAAGCACTTTGAC TTGAATCTGCGGCAGTTTGGACCCTACAGACTAAACTACTCTCGAACTGGAAGACACCTG GCTTTTGGAGGGCGCCGAGGTCATGTGGCTGCCCTTGATTGGGTAACAAAGAAGCTTATG TGCGAGATCAACGTCATGGAGGCGGTGCGGGACATCCGGTTTCTCCATTCTGAGGCACTG CTTGCTGTTGCTCAGAACCGCTGGCTCCACATCTATGACAATCAGGGCATTGAGCTCCAC TGTATCCGCCGCTGTGACCGAGTAACACGGCTTGAGTTCCTGCCCTTCCACTTCCTCCTG GCTACAGCTTCAGAAACAGGGTTTCTAACCTACCTGGATGTGTCAGTGGGGAAGATTGTG GCAGCTCTGAATGCTCGAGCTGGGCGGCTCGATGTTATGAGTCAGAACCCTTACAATGCC GTCATCCATCTCGGACACAGCAATGGGGCCGGTGAGCCCAACTTCGATGGCCTGGAGAGT AATCCATACAGAAGCCGGAAGCAGCGCCAGGAGTGGGAGGTGAAGGCCCTGCTAGAGAAG GGCTATGACCCGCAGGCTAAGGCTCCCTTCCAGCCAAAGCCAAAGCAGAAGGGCCGCAGC TCCACGGCAAGCCTGGTGAAGAGGAAGAGGAAGGTCATGGATGAGGAACACAGGGACAAG GTCCGGCAGAGCCTTCAGCAGCAGCATCATAAGGAGGCGAAGGCCAAGCCCACGGGGGCC CGGCCATCTGCCCTGGACAGATTTGTGCGCTGA >chr6_cox_hap1_92|SGP_v1.0_predicted_protein_92|371_AA METAPKPGKDVPPKKDKLQTKRKAQDPFPGPAPVPVEVVQKFCRIDKSRKLPHSKAKTRS RLEVAEAEEEETSIKAARSELLLAEEPGFLEGEDGEDTAKICQADIVEAVDIASAAKHFD LNLRQFGPYRLNYSRTGRHLAFGGRRGHVAALDWVTKKLMCEINVMEAVRDIRFLHSEAL LAVAQNRWLHIYDNQGIELHCIRRCDRVTRLEFLPFHFLLATASETGFLTYLDVSVGKIV AALNARAGRLDVMSQNPYNAVIHLGHSNGAGEPNFDGLESNPYRSRKQRQEWEVKALLEK GYDPQAKAPFQPKPKQKGRSSTASLVKRKRKVMDEEHRDKVRQSLQQQHHKEAKAKPTGA RPSALDRFVR* # Gene 93 (Forward). 4 exons. 130 aa. Score = 14.75 First 4637775 4637838 14.49 + 0 1 7.84 2.73 10.03 -22.40 AA 1: 22 chr6_cox_hap1_93 Internal 4638092 4638162 1.86 + 2 0 4.77 3.88 3.99 -24.85 AA 22: 45 chr6_cox_hap1_93 Internal 4638244 4638368 -1.39 + 0 2 2.80 1.22 9.36 -43.75 AA 46: 87 chr6_cox_hap1_93 Terminal 4638634 4638763 -0.21 + 1 0 4.41 0.00 9.88 -44.45 AA 87:130 chr6_cox_hap1_93 >chr6_cox_hap1_93|SGP_v1.0_predicted_cDNA_93|390_NN ATGGCGGAGCTGATCCAGAAGAAGCTACAGGGAGAAGTGGAGAAATATCAACAGCTACAG AAGGACTTAAGTAAATCCATGTCGGGGAGGCAGAAACTTGAAGCACAACTAACAGAAAAT AATATCGTGAAAGAGGAACTGGCCCTGCTGGATGGGTCCAACGTGGTCTTTAAACTTCTG GGTCCGGTGCTAGTCAAACAGGAGCTGGGGGAGGCTCGGGCCACAGTAGGGAAGAGGCTG GACTATATCACAGCTGAAATTAAGCGATACGAATCCCAGCTTCGGGATCTTGAGCGGCAG TCAGAGCAACAGAGGGAGACCCTTGCTCAGCTGCAGCAGGAGTTCCAGCGGGCCCAGGCA GCAAAGGCAGGGGCTCCTGGCAAGGCCTGA >chr6_cox_hap1_93|SGP_v1.0_predicted_protein_93|130_AA MAELIQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLL GPVLVKQELGEARATVGKRLDYITAEIKRYESQLRDLERQSEQQRETLAQLQQEFQRAQA AKAGAPGKA* # Gene 94 (Reverse). 7 exons. 196 aa. Score = 40.54 Terminal 4640334 4640462 -2.30 - 0 0 0.00 4.46 8.26 -44.10 AA 154:196 chr6_cox_hap1_94 Internal 4641952 4641984 10.42 - 0 0 4.53 4.88 7.20 -11.55 AA 143:153 chr6_cox_hap1_94 Internal 4642606 4642680 0.24 - 0 0 2.87 1.50 7.38 -26.25 AA 118:142 chr6_cox_hap1_94 Internal 4643426 4643464 2.55 - 0 0 3.89 2.47 5.11 -13.65 AA 105:117 chr6_cox_hap1_94 Internal 4644950 4645033 0.85 - 0 0 2.50 5.58 4.15 -29.40 AA 77:104 chr6_cox_hap1_94 Internal 4651882 4651916 3.98 - 2 0 1.84 5.57 4.80 -12.25 AA 65: 76 chr6_cox_hap1_94 First 4663146 4663338 24.81 - 0 1 1.12 3.13 30.43 -67.55 AA 1: 65 chr6_cox_hap1_94 >chr6_cox_hap1_94|SGP_v1.0_predicted_cDNA_94|588_NN ATGCGGGACCGGCACGTGAACATGCACCTCAATCTGCGGCCGTTTGACTGCCCCGTGTGC AACAAAAAGTTCAAGATGAAGCACCATCTGACTGAGCACATGAAGACGCACACAGGTCTC AAGCCCTACGAGTGCGGAGTCTGCGCCAAGAAGTTCATGTGGCGAGACAGCTTCATGCGC CACCGAGGACACTCTGTCTACCTGTCCACCTGCAAGGATTCAAAGAAGGCCCCTGTGTCC GTCTGGGATGAGGAGGAGGATGGTGCCGTGTTTACCGTCACAAGCCGCCAATATCGACCT CTTGATCCCTTGAGGGCCCGGCTCCTGGAGAAGTGGATCCGCGTGGCAGAGGGTGTGGTC CCATACCTTGGCACCTTCCTGAAGGACCTTGTGATGCTGGATGCAGCCTCCAAGGATGAG TTGGAGAATGGATACATCAATTTTGACAAGCGGAGGAAGGTGACAAGCCAGGACAAGGCT CCAAGTGTCATCAGTCGTGTCCTTAAGAAAAACAATCGTGACTCTGCAGTGGCTTCAGAG TATGAGCTGGTACAGCTGCTACCAGGGGAGCGAGGTCAGAGGCCATGA >chr6_cox_hap1_94|SGP_v1.0_predicted_protein_94|196_AA MRDRHVNMHLNLRPFDCPVCNKKFKMKHHLTEHMKTHTGLKPYECGVCAKKFMWRDSFMR HRGHSVYLSTCKDSKKAPVSVWDEEEDGAVFTVTSRQYRPLDPLRARLLEKWIRVAEGVV PYLGTFLKDLVMLDAASKDELENGYINFDKRRKVTSQDKAPSVISRVLKKNNRDSAVASE YELVQLLPGERGQRP* # Gene 95 (Reverse). 4 exons. 427 aa. Score = 48.55 Terminal 4667296 4667774 0.75 - 2 0 0.00 7.59 24.02 -166.60 AA 268:427 chr6_cox_hap1_95 Internal 4668395 4668511 2.25 - 2 1 1.28 4.18 10.04 -40.95 AA 229:268 chr6_cox_hap1_95 Internal 4668656 4669133 36.12 - 0 1 2.80 -0.29 55.16 -167.30 AA 70:229 chr6_cox_hap1_95 First 4669639 4669845 9.43 - 0 0 3.82 1.75 18.43 -72.45 AA 1: 69 chr6_cox_hap1_95 >chr6_cox_hap1_95|SGP_v1.0_predicted_cDNA_95|1281_NN ATGGCCACCGCTAACAGCATCATCGTGCTGGATGATGATGACGAAGATGAAGCAGCTGCT CAGCCAGGGCCCTCCCACCCACTCCCCAATGCGGCCTCACCTGGGGCAGAAGCCCCTAGC TCCTCTGAGCCTCATGGGGCCAGAGGAAGCAGTAGTTCGGGCGGCAAGAAATGCTACAAG CTGGAGAATGAGAAGCTGTTCGAAGAGATCCAGCGTTTGGAGCAGCTGCTGGCGCTCTAT GTGGCAGAGATCCGGCGGCTGCAGGAAAAGGAGTTGGATCTCTCAGAATTGGATGACCCA GACTCCGCATACCTGCAGGAGGCACGGTTGAAGCGTAAGCTGATCCGCCTCTTTGGGCGA CTATGTGAGCTGAAAGACTGCTCTTCACTGACCGGCCGTGTCATAGAGCAGCGCATCCCC TACCGTGGCACCCGCTACCCAGAGGTTAACAGGCGCATTGAGCGGCTCATCAACAAGCCA GGGCCTGATACCTTCCCTGACTATGGGGATGTGCTTCGGGCTGTAGAGAAGGCAGCTGCC CGACACAGCCTTGGCCTCCCCCGACAGCAGCTCCAGCTCATGGCTCAGGATGCCTTCCGA GATGTGGGCATCAGGTTACAGGAGCGACGTCACCTCGATCTCATCTACAACTTTGGCTGC CACCTCACAGATGACTATAGGCCAGGCGTTGACCCTGCACTATCAGATCCTGTGTTGGCC CGGCGCCTTCGGGAAAACCGGAGTTTGGCCATGAGTCGGCTGGATGAGGTCATCTCCAAA TACGCAATGTTGCAAGACAAAAGTAAAGATGGAGACAAGAGCCCCATGTCCTCACTACAG ATCTCCAATGAAAAGAACCTGGAACCTGGCAAACAGATCAGCAGATCTTCAGGGGAGCAG CAAAACAAAGGACGCATAGTGTCACCATCGTTACTGTCAGAAGAACCCCTGGCCCCCTCC AGCATAGATGCTGAAAGCAATGGAGAACAGCCTGAGGAGCTGACCCTGGAGGAAGAAAGC CCTGTGTCTCAGCTCTTTGAGCTAGAGATTGAAGCTTTGCCCCTGGATACCCCTTCCTCT GTGGAGACGGACATTTCCTCTTCCAGGAAGCAATCAGAGGAGCCCTTCACCACTGTCTTA GAGAATGGAGCAGGCATGGTCTCTTCTACTTCCTTCAATGGAGGCGTCTCTCCTCACAAC TGGGGAGATTCTGGTCCCCCCTGCAAAAAATCTCGGAAGGAGAAGAAGCAAACAGGATCA GGGCCATTAGGAAACAGGTAA >chr6_cox_hap1_95|SGP_v1.0_predicted_protein_95|427_AA MATANSIIVLDDDDEDEAAAQPGPSHPLPNAASPGAEAPSSSEPHGARGSSSSGGKKCYK LENEKLFEEIQRLEQLLALYVAEIRRLQEKELDLSELDDPDSAYLQEARLKRKLIRLFGR LCELKDCSSLTGRVIEQRIPYRGTRYPEVNRRIERLINKPGPDTFPDYGDVLRAVEKAAA RHSLGLPRQQLQLMAQDAFRDVGIRLQERRHLDLIYNFGCHLTDDYRPGVDPALSDPVLA RRLRENRSLAMSRLDEVISKYAMLQDKSKDGDKSPMSSLQISNEKNLEPGKQISRSSGEQ QNKGRIVSPSLLSEEPLAPSSIDAESNGEQPEELTLEEESPVSQLFELEIEALPLDTPSS VETDISSSRKQSEEPFTTVLENGAGMVSSTSFNGGVSPHNWGDSGPPCKKSRKEKKQTGS GPLGNR* # Gene 96 (Forward). 3 exons. 200 aa. Score = 18.27 First 4677849 4677867 -3.07 + 0 1 2.49 2.38 1.32 -6.65 AA 1: 7 chr6_cox_hap1_96 Internal 4678714 4678732 -3.93 + 2 2 3.41 1.48 1.41 -6.65 AA 7: 13 chr6_cox_hap1_96 Terminal 4686854 4687415 25.28 + 1 0 3.06 0.00 51.31 -195.65 AA 13:200 chr6_cox_hap1_96 >chr6_cox_hap1_96|SGP_v1.0_predicted_cDNA_96|600_NN ATGGATCAGCAGGGCAAGGGCATTGGCCTGAAGGTTGGGGCAGCCCACTTCTGGTGTTTG GCGCTGGAATTAAACAACCACCATGTGGAGCAAAAAGGCAAGACCAAGACCACCAAAAAG CGCCCTCAGCGCACAACATCCAACGTGTTTGCCATGTTTGACCAGTCACAGATTCAGGAG TTCAAAGAGGCCTTCAACATGATTGATCAGAACAGAGATGGTTTCATCAACAAAGAAGAT TTGCATGATATGCTTGTTTCCCTAGGGAAGAATCCCACCGATGCATACCTTGATGCCATA ATGAATGAGGCACCAGGGCCCATCGATTTCACCATGTTCCTCACCATATTTGGTGAGAAG TTAAATGGCACAGATCCTGAAGATGTCATTGGAAATGCTTTTGCTTGCTTTGATGAAGAA GCAACAGGCATTATTCAGGAAGATTACCTGAGAGAGCTGCTGATAACCATGTGGGATCGG TTTACGGATGAGGAAGTGGATGAGCTGTACAGAGAAGCGCCTATTAACAAAAAGGGGAAT TTCAATTACATCGAGTTCACATGCATCCTGAAACATGGAGCAAAAGACAAAGACGACTGA >chr6_cox_hap1_96|SGP_v1.0_predicted_protein_96|200_AA MDQQGKGIGLKVGAAHFWCLALELNNHHVEQKGKTKTTKKRPQRTTSNVFAMFDQSQIQE FKEAFNMIDQNRDGFINKEDLHDMLVSLGKNPTDAYLDAIMNEAPGPIDFTMFLTIFGEK LNGTDPEDVIGNAFACFDEEATGIIQEDYLRELLITMWDRFTDEEVDELYREAPINKKGN FNYIEFTCILKHGAKDKDD* # Gene 97 (Reverse). 1 exons. 227 aa. Score = 3.55 Single 4713466 4714146 3.55 - 0 0 0.00 1.37 42.36 -237.30 AA 1:227 chr6_cox_hap1_97 >chr6_cox_hap1_97|SGP_v1.0_predicted_cDNA_97|681_NN ATGTCTGTGCCCCTGCTCAACGATGCTGCCACCGTGTCTGGAGCTGAGCGGGAAACGGCC GTGGTTATTTTTTTACATGGACTTGGAGACACAGGGCACAGCTGGGCTGACGCCCTCTCC ACCATTCGGCTCCCTCACGTCAAGTACATCTGTTCCCATGAGCCTAGGATCCCTGTGACC CTCAACATGAAGATGGTGATGCCCTCCTGGTTTGACCTGATGGGGCTGAGTCCAGATGCC CCAGAGGACGAGGCTGGCATCAAGAAGGCAGCAGAGAACATCAAGGCCTTGATTGAGCAT GAAATGAAGAACGGGATCCCTGCCAATCAAATCATCCTGGGAGGCTTTTCACAGGGCCGG GCCCTGTCCCTCTACATGGCCCTCACCTGCCCCCACCCTCTGGCTGGCATCCTGGCTTTG AGCTGCTGGCCGCCTCTGCACCGGGCCTTCCCCCAGGCAGCTAATGGCAGTGCCAAGGAC CTGGCCATCCTCCAGTGCCATGGGGAGCTGGACCCCATGGTGCCCGTACGGTTTGGGGCC CTGATGGCTGAGAAGCTCCGGTCTGTTGTCACACCTGCCAGGGTCCAGTTCCAGACATAC CTGGGTGTCATGCACAGCTCCTGTCCTCAGGAGATGGCAGCTGTGAAGGAATTTCTTGAG AAGCTGCTGCCTCCTGTCTAA >chr6_cox_hap1_97|SGP_v1.0_predicted_protein_97|227_AA MSVPLLNDAATVSGAERETAVVIFLHGLGDTGHSWADALSTIRLPHVKYICSHEPRIPVT LNMKMVMPSWFDLMGLSPDAPEDEAGIKKAAENIKALIEHEMKNGIPANQIILGGFSQGR ALSLYMALTCPHPLAGILALSCWPPLHRAFPQAANGSAKDLAILQCHGELDPMVPVRFGA LMAEKLRSVVTPARVQFQTYLGVMHSSCPQEMAAVKEFLEKLLPPV*