## date Tue May 2 18:26:53 2006 ## source-version: geneid v 1.2 -- geneid@imim.es # Sequence chr5_random - Length = 143687 bps # Optimal Gene Structure. 3 genes. Score = 543.70 # Gene 1 (Reverse). 2 exons. 908 aa. Score = 478.13 Terminal 13848 16549 483.13 - 2 0 0.00 3.29 251.35 769.15 AA 8:908 chr5_random_1 First 34048 34069 -5.00 - 0 1 2.47 0.77 2.23 -7.70 AA 1: 8 chr5_random_1 >chr5_random_1|SGP_v1.0_predicted_cDNA_1|2724_NN ATGGACACAAACTCTACAAAAGTGTCACATTTGAAGACGAGCACTGAGGATGAGGAACCA ACTGAAGAATATGAAAATGTTGGAAATGCAGCATCTAAGTGGCCAAAAGTGGAGGATCCT ATCCCTGAATCTAAGGTTGGTGACACATGTGTTTGGGATAGCAAGGTAGAGAATCAACAG AAAAAGCCTGTGGAAAACAGGATGAAGGAGGACAAAAGCAGCATCAGGGAAGCAATCAGC AAAGCCAAGAGTACAGCAAATATAAAGACAGAACAGGAAGGTGAGGCATCTGAGAAGAGC TTGCATCTGAGCCCACAGCATATCACACACCAGACTATGCCTATAGGACAGAGAGGCAGT GAGCAAGGCAAACGTGTGGAGAACATTAATGGAACCTCCTACCCTAGTCTACAGCAGAAA ACCAATGCTGTTAAGAAATTACATAAATGTGATGAATGTGGGAAATCCTTCAAATATAAT TCCCGCCTTGTTCAACATAAAATTATGCACACTGGGGAAAAGCGCTATGAATGTGATGAC TGTGGAGGGACTTTCCGGAGCAGCTCGAGCCTTCGGGTCCACAAACGGATCCACACTGGG GAGAAGCCGTACAAGTGTGAGGAATGTGGGAAAGCCTACATGTCCTACTCCAGCCTTATA AACCACAAAAGCACCCATTCTGGGGAGAAGAACTGTAAATGTGATGAATGTGGAAAATCC TTCAATTATAGCTCTGTTCTGGACCAGCATAAAAGGATCCACACTGGGGAGAAGCCCTAT GAATGTGGTGAGTGTGGGAAGGCCTTCAGGAACAGCTCTGGGCTCAGAGTCCACAAAAGG ATCCACACGGGGGAGAAGCCCTATGAATGCGACATCTGTGGGAAAACCTTCAGTAACAGC TCTGGCCTTAGGGTCCATAAAAGGATCCACACAGGTGAGAAACCTTACGAATGTGATGAG TGTGGGAAGGCCTTCATTACTTGTAGAACACTTCTCAACCATAAAAGCATCCACTTTGGA GATAAACCCTATAAATGTGATGAGTGTGAGAAATCTTTTAATTATAGCTCTCTTCTCATT CAGCATAAAGTCATCCACACTGGAGAGAAACCTTATGAATGTGATGAATGTGGGAAGGCT TTCAGGAACAGCTCAGGCCTCATAGTGCATAAAAGGATCCACACAGGAGAGAAACCTTAC AAGTGTGATGTCTGTGGCAAAGCATTCAGCTATAGCTCAGGCCTCGCAGTCCATAAAAGC ATTCACCCTGGGAAGAAAGCCCATGAATGTAAGGAGTGTGGGAAATCCTTTAGTTATAAC TCACTACTTCTTCAACACAGAACTATTCATACCGGAGAGAGACCTTATGTATGTGATGTG TGTGGGAAAACGTTCAGAAACAATGCAGGCCTCAAAGTCCACAGGAGGCTCCATACTGGG GAAAAACCATATAAGTGTGATGTGTGTGGGAAAGCCTATATCTCACGCTCTAGCCTTAAA AATCACAAAGGAATCCACCTTGGGGAGAAGCCCTATAAATGTAGCTATTGTGAGAAATCC TTCAACTACAGCTCTGCCCTTGAACAGCATAAAAGGATTCATACCAGGGAAAAACCCTTT GGGTGTGATGAGTGTGGTAAAGCTTTCAGAAATAATTCTGGCCTTAAAGTACATAAACGA ATCCACACTGGGGAACGACCTTACAAATGTGAAGAATGTGGGAAAGCATACATCTCTCTC TCGAGCCTTATAAATCATAAAAGTGTACACCCTGGGGAGAAGCCCTTTAAGTGTGACGAG TGTGAGAAGGCCTTCATCACATACCGAACCCTTACAAACCACAAAAAAGTTCATCTTGGG GAGAAGCCCTACAAATGTGATGTGTGTGAGAAATCTTTTAATTACACATCGCTCCTTTCT CAGCACAGAAGGGTCCACACTAGAGAGAAACCCTATGAATGTGACAGGTGTGAGAAGGTC TTCAGAAACAACTCAAGCCTTAAAGTTCATAAAAGAATCCATACTGGGGAGAGGCCCTAT GAATGTGATGTGTGTGGAAAAGCCTACATCTCACACTCAAGCCTTATTAACCATAAGAGT ACCCACCCTGGCAAGACACCCCATACATGTGATGAATGTGGAAAAGCTTTTTTCTCAAGC AGAACTCTTATAAGCCATAAAAGAGTCCATCTTGGGGAGAAACCCTTCAAGTGTGTTGAG TGTGGGAAATCTTTCAGTTACAGCTCTCTCCTTTCTCAGCACAAGAGGATCCACACAGGG GAGAAACCCTATGTGTGTGATAGGTGTGGGAAGGCCTTCAGGAACAGCTCAGGCCTCACA GTGCATAAAAGGATCCACACAGGTGAGAAACCCTATGAATGTGATGAGTGTGGGAAGGCA TACATCTCACACTCAAGTCTTATCAATCATAAAAGTGTCCACCAGGGGAAGCAGCCCTAT AATTGTGAGTGTGGGAAATCCTTCAATTATAGATCAGTCCTTGACCAGCACAAAAGGATC CACACTGGAAAGAAGCCATACCGATGTAATGAGTGTGGTAAGGCTTTTAATATCAGATCA AATCTCACCAAGCATAAAAGAACCCATACTGGAGAGGAATCTTTAAATGTGATATATGTG GGAAGTTATAGTGGCACATCCCAGAAGAGAACCTATGAGGGAGGGAATGCCCTGGATGGG GGCAGGATGAGGATGCCTCTGTAG >chr5_random_1|SGP_v1.0_predicted_protein_1|908_AA MDTNSTKVSHLKTSTEDEEPTEEYENVGNAASKWPKVEDPIPESKVGDTCVWDSKVENQQ KKPVENRMKEDKSSIREAISKAKSTANIKTEQEGEASEKSLHLSPQHITHQTMPIGQRGS EQGKRVENINGTSYPSLQQKTNAVKKLHKCDECGKSFKYNSRLVQHKIMHTGEKRYECDD CGGTFRSSSSLRVHKRIHTGEKPYKCEECGKAYMSYSSLINHKSTHSGEKNCKCDECGKS FNYSSVLDQHKRIHTGEKPYECGECGKAFRNSSGLRVHKRIHTGEKPYECDICGKTFSNS SGLRVHKRIHTGEKPYECDECGKAFITCRTLLNHKSIHFGDKPYKCDECEKSFNYSSLLI QHKVIHTGEKPYECDECGKAFRNSSGLIVHKRIHTGEKPYKCDVCGKAFSYSSGLAVHKS IHPGKKAHECKECGKSFSYNSLLLQHRTIHTGERPYVCDVCGKTFRNNAGLKVHRRLHTG EKPYKCDVCGKAYISRSSLKNHKGIHLGEKPYKCSYCEKSFNYSSALEQHKRIHTREKPF GCDECGKAFRNNSGLKVHKRIHTGERPYKCEECGKAYISLSSLINHKSVHPGEKPFKCDE CEKAFITYRTLTNHKKVHLGEKPYKCDVCEKSFNYTSLLSQHRRVHTREKPYECDRCEKV FRNNSSLKVHKRIHTGERPYECDVCGKAYISHSSLINHKSTHPGKTPHTCDECGKAFFSS RTLISHKRVHLGEKPFKCVECGKSFSYSSLLSQHKRIHTGEKPYVCDRCGKAFRNSSGLT VHKRIHTGEKPYECDECGKAYISHSSLINHKSVHQGKQPYNCECGKSFNYRSVLDQHKRI HTGKKPYRCNECGKAFNIRSNLTKHKRTHTGEESLNVIYVGSYSGTSQKRTYEGGNALDG GRMRMPL* # Gene 2 (Forward). 5 exons. 245 aa. Score = 41.07 First 64341 64389 -4.99 + 0 1 0.79 4.36 1.43 -17.15 AA 1: 17 chr5_random_2 Internal 73615 73962 28.21 + 2 1 6.32 2.09 17.28 22.54 AA 17:133 chr5_random_2 Internal 76368 76643 16.07 + 2 1 5.52 5.38 13.77 -35.83 AA 133:225 chr5_random_2 Internal 113387 113407 5.15 + 2 1 4.95 4.98 2.56 -7.35 AA 225:232 chr5_random_2 Terminal 114271 114311 -3.37 + 2 0 3.58 0.00 4.18 -13.30 AA 232:245 chr5_random_2 >chr5_random_2|SGP_v1.0_predicted_cDNA_2|735_NN ATGGCTCTCATGCTCAGTTTGGTTCTGAGTCTCCTCAAGCTGGGATCAGGGCAGTGGCAG GTGTTTGGGCCAGACAAGCCTGTCCAGGCCTTGGTGGGGGAGGACGCAGCATTCTCCTGT TTCCTGTCTCCTAAAACCAATGCAGAGGCCATGGAAGTGCGGTTCTTCAGGGGCCAGTTC TCTAGCGTGGTCCACCTCTACAGGGACGGGAAGGACCAGCCATTTATGCAGATGCCACAG TATCAAGGCAGGACAAAACTGGTGAAGGATTCTATTGCGGAGGGGCGCATCTCTCTGAGG CTGGAAAACATTACTGTGTTGGATGCTGGCCTCTATGGGTGCAGGATTAGTTCCCAGTCT TACTACCAGAAGGCCATCTGGGAGCTACAGGTGTCAGCACTGGGCTCAGTTCCTCTCATT TCCATCACGGGATATGTTGATAGAGACATCCAGCTACTCTGTCAGTCCTCGGGCTGGTTC CCCCGGCCCACAGCGAAGTGGAAAGGTCCACAAGGACAGGATTTGTCCACAGACTCCAGG ACAAACAGAGACATGCATGGCCTGTTTGATGTGGAGATCTCTCTGACCGTCCAAGAGAAC GCCGGGAGCATATCCTGTTCCATGCGGCATGCTCATCTGAGCCGAGAGGTGGAATCCAGG GTACAGATAGGAGGGAAAATCCAGGCGGAACTGGAATTGAGAGACGCCCGGAAACACGCA GGTACCAACGCCTGA >chr5_random_2|SGP_v1.0_predicted_protein_2|245_AA MALMLSLVLSLLKLGSGQWQVFGPDKPVQALVGEDAAFSCFLSPKTNAEAMEVRFFRGQF SSVVHLYRDGKDQPFMQMPQYQGRTKLVKDSIAEGRISLRLENITVLDAGLYGCRISSQS YYQKAIWELQVSALGSVPLISITGYVDRDIQLLCQSSGWFPRPTAKWKGPQGQDLSTDSR TNRDMHGLFDVEISLTVQENAGSISCSMRHAHLSREVESRVQIGGKIQAELELRDARKHA GTNA* # Gene 3 (Reverse). 2 exons. 133 aa. Score = 24.50 Terminal 132220 132483 13.25 - 0 0 0.00 2.33 13.47 19.80 AA 46:133 chr5_random_3 First 135651 135785 11.25 - 0 0 0.47 0.54 14.03 5.18 AA 1: 45 chr5_random_3 >chr5_random_3|SGP_v1.0_predicted_cDNA_3|399_NN ATGGTGGAGGCGGTGGATCTGGGCAAAGACCCCAACGGGCCCAACCATTCCTCGATTCTG TTCACCAGGGAGGACGGCAACTCTAGGTCCTTATACCTGCTGCCCAGCCCAGCCAAGCAG CTGCTGCACCACTCGGGGTGGGAGCTTGCCATTAAGATCATTCGGCAGTTAATGGAAAAA TTTAACTTGGATCTACCAACAGTTACACAGGCCTTCTTAAAAAATAATGGTGAGTTGGAG GCTACTTCCTCCTTCTTAGCGGCTGGTCAGAGAGCTGATAGATACCCCATTTGGTCCCAA CAAGGTGACATAGATCTGCAAAAAGATGATGAGGATACCAGAGATGCATTGGTCAAAAAA CTTAGTGCTCAGAATGTAGCTTGGAGGATTGAGTTTTAA >chr5_random_3|SGP_v1.0_predicted_protein_3|133_AA MVEAVDLGKDPNGPNHSSILFTREDGNSRSLYLLPSPAKQLLHHSGWELAIKIIRQLMEK FNLDLPTVTQAFLKNNGELEATSSFLAAGQRADRYPIWSQQGDIDLQKDDEDTRDALVKK LSAQNVAWRIEF*