## date Tue May  2 18:26:53 2006
## source-version: geneid v 1.2 -- geneid@imim.es
# Sequence chr4_random - Length = 842648 bps
# Optimal Gene Structure. 7 genes. Score = 379.56 
# Gene 1 (Reverse). 3 exons. 85 aa. Score = 42.29 
Internal   280038   280248	42.94	- 1 0	-1.44	 1.58	36.34	23.25	AA  15: 85 chr4_random_1
Internal   293715   293746	-1.96	- 0 2	-0.56	 4.84	 3.78	-11.20	AA   5: 15 chr4_random_1
   First   327118   327129	 1.30	- 0 0	 4.50	 1.16	 2.94	-4.20	AA   1:  4 chr4_random_1

>chr4_random_1|SGP_v1.0_predicted_cDNA_1|255_NN
ATGAAGCTGCAGGATTCACTGAGCATCGAGAGGCAGAGCGATGTCCAGGTCTTCCAGCTG
GAATCCACCTTCGACCTGAAGCGCTACCTGAGCAGCGCCGAGCGCGCCGGCCTGGCCGCC
TCCCTGCAGCTCACCGAGACGCAGGTTAAGATCTGGTTCCAGAACCGCCGCAACAAGTGG
AAGCGGCAGCTGGCAGCCGAGCTGGAGGCGGCCAGCCTGTCCCCGCCGGGAGCGCAGCGC
CTGGTCCGCGTGCCG

>chr4_random_1|SGP_v1.0_predicted_protein_1|85_AA
MKLQDSLSIERQSDVQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQNRRNKW
KRQLAAELEAASLSPPGAQRLVRVP

# Gene 2 (Forward). 2 exons. 60 aa. Score = 6.14 
   First   475754   475762	 0.05	+ 0 0	 3.53	 2.11	 2.63	-3.15	AA   1:  3 chr4_random_2
Terminal   484077   484247	 6.09	+ 0 0	 1.00	 0.00	10.34	15.31	AA   4: 60 chr4_random_2

>chr4_random_2|SGP_v1.0_predicted_cDNA_2|180_NN
ATGGCGGTGGTGCAGCACCAGTTTGAATTTGAATACCAGACCAAAGTGGATGGTGAGATA
ATCCTTCATCTTTATGACAAAGGAGGAATTGAGCAAACAATTTGTACGTTGGTTGGTGTG
TTTGCATTTGTTTTACTGGATTCTGCCAATAAGAAAGTGTCCCTGGACAGAGATACATAA


>chr4_random_2|SGP_v1.0_predicted_protein_2|60_AA
MAVVQHQFEFEYQTKVDGEIILHLYDKGGIEQTICTLVGVFAFVLLDSANKKVSLDRDT*


# Gene 3 (Reverse). 5 exons. 300 aa. Score = 142.79 
Terminal   493679   493924	44.33	- 0 0	 0.00	 1.83	37.59	 8.11	AA 219:300 chr4_random_3
Internal   495478   495708	44.27	- 0 0	 1.84	 2.75	33.53	15.04	AA 142:218 chr4_random_3
Internal   496890   496946	 7.25	- 0 0	 0.65	 2.75	 9.50	 3.02	AA 123:141 chr4_random_3
Internal   498360   498588	33.27	- 1 0	-0.06	-3.36	34.70	12.64	AA  46:122 chr4_random_3
   First   498738   498874	13.67	- 0 2	 0.30	 2.14	14.68	 1.87	AA   1: 46 chr4_random_3

>chr4_random_3|SGP_v1.0_predicted_cDNA_3|900_NN
ATGGTGCAGACGGATGTGCTCCTACCAGAGCTGGCCCCACAGACAGTGCCACCCTACGAG
CTGCCCTGCAAAGAGTATGACGTGGCCAGAAACACGGGCGCCTACACGTCCTCCGGCCTG
GCCACCGCTGGCTGGAGGGTGGGCGAGCGACTGCAGGACACGAACAGCTGGAAGTCGGAG
CTGCAGCGTGAGGTGGAGGCACTGGCTGCGGAGACCGACCTGCTGCTGGCCCAGAAGCAA
CGGCTGGAGCGCGCCCTGGATGCCATGGAGGTGCCCTTCTCCATCACCACTGACAACATG
CAGTGCAGCCAGCGCCACCAGCACACCAACCTTTTGCGTGACCATGTGGAGACAGAGCTG
CTGAAGGAAGCTGAGCTCATCCGGAACATTCAGGAGCTGCTGAAGAGAGCCATCATGCAA
GCACCCCGCAGCGCCTCCACCCCAGAGACCCGGACCAAGTTCACACAGGACAATCTGTGC
CACGCCCAGCGCGAGCGCCTGGACTCGGCCAACCTGTGGGTGCTGGTGGACTGCATCCTT
CGCGACACCTCCGAGGACCTGGGACTCCAGTGTGACGCCGTGAACCTGGCCTTCGGGCGC
CGCTGTGAGGAACTGGAGGACGCGCGGCACAAGCTGCAGCACCACCTGCACAAGCCCCAG
CTCACACCCCCCAACACCCCCAAGCTGGTGAGTGAGGTGGAGGAGCTGTACAAGTCCATC
ACAGCGCTGCGGGAGAAGCTTCTACAAGCGGAGCAGTCCCTGCGCAACCTCAAGGACATC
CACATGAGCCTGGAGAAGGACGTCACCGCCATGACCAACAGTGTCTTCATCGACCGCCAG
AAGTGCATGGCCCATCGTACTTGCTACCCCACCATTCTGCAGCTGGCTGGCTACCAGTGA


>chr4_random_3|SGP_v1.0_predicted_protein_3|300_AA
MVQTDVLLPELAPQTVPPYELPCKEYDVARNTGAYTSSGLATAGWRVGERLQDTNSWKSE
LQREVEALAAETDLLLAQKQRLERALDAMEVPFSITTDNMQCSQRHQHTNLLRDHVETEL
LKEAELIRNIQELLKRAIMQAPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCIL
RDTSEDLGLQCDAVNLAFGRRCEELEDARHKLQHHLHKPQLTPPNTPKLVSEVEELYKSI
TALREKLLQAEQSLRNLKDIHMSLEKDVTAMTNSVFIDRQKCMAHRTCYPTILQLAGYQ*


# Gene 4 (Forward). 2 exons. 60 aa. Score = 11.53 
   First   702456   702464	 2.05	+ 0 0	 5.32	 0.25	 4.17	-3.15	AA   1:  3 chr4_random_4
Terminal   710772   710942	 9.48	+ 0 0	 2.62	 0.00	10.90	16.17	AA   4: 60 chr4_random_4

>chr4_random_4|SGP_v1.0_predicted_cDNA_4|180_NN
ATGGCGGCGGTGCAGTACCAGTTTGAATTTGAATACCAGACCAAAGTGGATGGTGAGATA
ATCCTTCATCTTTATGACAAAGGAGGAATTGAGCAAACAATTTGTATGTTGGATGGTGTG
TTTGCATTTCTTTTACTGGATTCTGCCAATAAGAAAGTGTCCCTGGACAGAGATACGTAA


>chr4_random_4|SGP_v1.0_predicted_protein_4|60_AA
MAAVQYQFEFEYQTKVDGEIILHLYDKGGIEQTICMLDGVFAFLLLDSANKKVSLDRDT*


# Gene 5 (Reverse). 4 exons. 253 aa. Score = 113.98 
Terminal   720345   720612	25.41	- 1 0	 0.00	 1.19	24.40	 8.80	AA 164:253 chr4_random_5
Internal   721375   721529	23.79	- 0 2	 2.45	 1.10	20.14	12.22	AA 113:164 chr4_random_5
Internal   722143   722373	44.76	- 0 0	 1.84	 2.75	33.73	16.19	AA  36:112 chr4_random_5
   First   723071   723175	20.01	- 0 0	 0.44	 1.40	19.10	 8.14	AA   1: 35 chr4_random_5

>chr4_random_5|SGP_v1.0_predicted_cDNA_5|759_NN
ATGAACCGAGAGCACACAGAGATCTGCGAGATGGACTGGTCGGACAAGGTGGAGGCCTAC
AACCTCGACGAGACTTGCGGGCGCCACCACAGCCAGAGCACCGAGCCCCGCAGCGCCTCC
ACCCCAGAGACCCGGACCAAGTTCACACAGGACAATCTGTGCCACGCCCAGCGCGAGCGC
CTGGACTCGGCCAACCTGTGGGTGCTTGTGGACTGCATCCTTCGCGACACCTCCGAGGAC
CTGGGACTCCAGTGTGACGCCGTGAACCTGGCCTTCGGGCGCCGCTGTGAGGAACTGGAG
GACGTGCGGCACAAGCTGCAGCACCACCTGCACAAGATGCTGCGGGAAATCACAGATCAG
GAACACAACGTGGTGGCACTGAAGGAGGCCATCAAGGACAAGGAGGAACCTCTGCACATA
GCCCAGACCCGGCTGTACCTGCTCTCACACCGGCCCAACATGCAGCTGTGCCGCGAAGCA
GCCCAGTTCAGGTGCATACTTCTGCCCTCCCCAGCCCCAGCTCACACACCCAACACCCCC
AAGCTGGTGAGTGAGGTGGAGGAGCTGAACATGTCCATCACAGCGCTGTGGGAGAAGCTT
CTAGAAGGGGAGCAGTCCCTTTGCAACCTCGAGGACATCCACATGAGCCTGGAGAAGGAT
GTTACCGCCATGACCAACAGTCTCTTCATCGACCGCCAGAAGTGCATGGCCCATCGTACT
TGCTACACCCCCATCCTGCAGCTGGCTGGCTACCAGTGA

>chr4_random_5|SGP_v1.0_predicted_protein_5|253_AA
MNREHTEICEMDWSDKVEAYNLDETCGRHHSQSTEPRSASTPETRTKFTQDNLCHAQRER
LDSANLWVLVDCILRDTSEDLGLQCDAVNLAFGRRCEELEDVRHKLQHHLHKMLREITDQ
EHNVVALKEAIKDKEEPLHIAQTRLYLLSHRPNMQLCREAAQFRCILLPSPAPAHTPNTP
KLVSEVEELNMSITALWEKLLEGEQSLCNLEDIHMSLEKDVTAMTNSLFIDRQKCMAHRT
CYTPILQLAGYQ*

# Gene 6 (Reverse). 2 exons. 177 aa. Score = 51.61 
Terminal   724904   725407	59.50	- 0 0	 0.00	-0.76	55.24	-18.75	AA  10:177 chr4_random_6
   First   734862   734888	-7.89	- 0 0	 3.24	 2.08	-2.66	-9.45	AA   1:  9 chr4_random_6

>chr4_random_6|SGP_v1.0_predicted_cDNA_6|531_NN
ATGGGGAGAGCACCGCCAGCAGCGGGGCTGGAGGTGTGGTTCCAGAACTGCTATGCTCGC
TACCACCAGGCCTTCGCCGACTGCAACCAGTCAGAGCGGGAGCTGCAGGGGCACGAGAGC
CAGCAGCTGGCCGCAGAGACCCAGGCGCTGGCACAGTCGACACAGCAAGACTCCACGTGC
AGGGTGGGCGAGCGACTGCAGGACACGCACAGCTGGAAGTCGGAGCTGCAGCGCGAGGTG
AAGGTGCTGGCTGCGGAGACCGACCTGCTGCTGGCCCAGAAGCAACGGCTGGAGTGCGCC
CTGGATGCCATGGAGGTGCCCTTCTCCATTGCCACTGACAACCTGCAGTGCAGCCAGTGC
CACCAGCACGCCAACCTTGTGCATGACCATGTGGAGACGGAGCTGCTGAAGGTGCCAGCA
GCCTTGGGTGGCCAGGACTTGTGGGCACAGAGAGGAGGAGCCCCCGGCAGTTCATGTGGA
CAAGCCACGTGGCTGCTGCAAGCACACGGGAGACCAGCCCTCTATGCGTGA

>chr4_random_6|SGP_v1.0_predicted_protein_6|177_AA
MGRAPPAAGLEVWFQNCYARYHQAFADCNQSERELQGHESQQLAAETQALAQSTQQDSTC
RVGERLQDTHSWKSELQREVKVLAAETDLLLAQKQRLECALDAMEVPFSIATDNLQCSQC
HQHANLVHDHVETELLKVPAALGGQDLWAQRGGAPGSSCGQATWLLQAHGRPALYA*

# Gene 7 (Forward). 1 exons. 67 aa. Score = 11.23 
   First   740150   740352	11.23	+ 0 2	-1.16	 0.94	25.95	-71.05	AA   1: 67 chr4_random_7

>chr4_random_7|SGP_v1.0_predicted_cDNA_7|203_NN
ATGAAGTTATTCGGCTTCGGGAGCCGCAGGGGCCAGACGGCCCACGGCTCCATAGAACAT
GTCTACACGGGTTCCGGATACCGAATCCGGGACTCCGAACTGCAGAAGATCCACAGGGCA
GCTGTCAAGGGCGACGCCGTGGGGGTGGAGCGCTGCCTGGCGCGCAGGAGCGGAGACCTG
GATGCCCTGGACAAGCAGCACAG

>chr4_random_7|SGP_v1.0_predicted_protein_7|67_AA
MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL
DALDKQHg