SGP predictions combine geneid predictions with tblastx comparison of the Human genome against the Mouse genome. SGP was run on the masked fasta sequences for the following human genome version: golden_path_200405 (hg17) It was also using homology evidences (the SRs - similarity regions) from TBLASTX, in which a masked version of the previous human genome assembly was comparedagainst the following mouse assembly version: mmMar2005 (200503mm6) Predictions were obtained per chromosome and output in the following formats: chr1.sgp (geneid) chr1.gff (geneid predictions in gff format) chr1.gtf (geneid predictions in gtf format) chr1.cds (nucleotide sequence of predicted sequences) chr1.prot (amino acid sequence of predicted protein sequences) chr1_tbxsr.gff (gff output of geneid combined with tblastx)