## date Mon May 23 23:09:35 2005 ## source-version: geneid v 1.2 -- geneid@imim.es # Sequence chr10_random - Length = 113275 bps # Optimal Gene Structure. 4 genes. Score = 149.40 # Gene 1 (Reverse). 6 exons. 206 aa. Score = 46.38 Terminal 6621 6758 8.07 - 0 0 0.00 4.26 8.20 15.10 AA 161:206 chr10_random_1 Internal 7645 7725 12.72 - 0 0 2.54 4.29 9.84 7.37 AA 134:160 chr10_random_1 Internal 8172 8339 3.55 - 0 0 1.52 0.03 7.80 15.93 AA 78:133 chr10_random_1 Internal 8399 8536 6.48 - 0 0 -2.18 3.10 10.45 17.23 AA 32: 77 chr10_random_1 Internal 10176 10255 19.94 - 2 0 5.00 6.54 10.19 5.31 AA 5: 31 chr10_random_1 First 11528 11540 -4.38 - 0 1 3.72 -0.69 1.72 0.91 AA 1: 5 chr10_random_1 >chr10_random_1|SGP_v1.0_predicted_cDNA_1|618_NN ATGATCGTGTCAGGTAAAAAGCTCCGACTCACCATTATTGAATGTGGGTGTGACATTAAC ATGATGATTGATCTGGCTGAAGTAGCAGATCTGGGATTTGGTAATGTGGGCCTGCACTCT ATGAGATATTTACATCGTTTTGGTGCTAAATGTATTGCTGTTGGTGAGTCTGATGGGAGT ATATGGAATCCAGATGGTATTGACCCAAAGGAACTGGAAGACTTCAAATTGCTATTAATT GTGATTTTCAATCAATGGCAGCAACATGGGTCCATTCTGGGCTTCCCCAAGGCAAAGCCC TATGAAGGAAGCATCTTGGAGGCCGACTGTGACATACTGATCCCAGCTGCCAGTGAGAAG CAGTTGACCAAATCCAACGCACCCAGAGTCAAAGCCAAGATCATTGCTGAAGGTGCCAAT GGGCCAACAACTCCAGAAGCTGACAAGATCTTCCTGGAGAGAAACATTATGGTTATTCCA GATCTCTACTTGAATGCTGGAGGAGTGACAGTATCTTACTTTGAGTGGCTGAAGAATCTA AATCATGTCAGCTATGGCCGTTTGACCTTCAAATATGAAAGGGATTCTAACTACCACTTG CTCAGTGAGTATCGATAA >chr10_random_1|SGP_v1.0_predicted_protein_1|206_AA MIVSGKKLRLTIIECGCDINMMIDLAEVADLGFGNVGLHSMRYLHRFGAKCIAVGESDGS IWNPDGIDPKELEDFKLLLIVIFNQWQQHGSILGFPKAKPYEGSILEADCDILIPAASEK QLTKSNAPRVKAKIIAEGANGPTTPEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLKNL NHVSYGRLTFKYERDSNYHLLSEYR* # Gene 2 (Forward). 1 exons. 330 aa. Score = 67.50 Single 28206 29195 67.50 + 0 0 1.17 0.00 47.50 69.07 AA 1:330 chr10_random_2 >chr10_random_2|SGP_v1.0_predicted_cDNA_2|990_NN ATGGCTCATGCTAGTTCATCAAATATTGGGCCCTTCCTGGACAAGAGAAGCTATAACCCA ATGCCAGAGCAGAAGTCAGCATCCAGTATTGTAGCTGTCCCTCTCAGTGAATGGCTGCTT GGGAGCCAACCTGCCAGTGGTCATCAGGCTCCTTACATACCCAGCACCAACCCCCAGGAC TGGCTCACCCAAAAGCAGACCTTGGAGAATAGCCAGACTTCTTTCAGAGCCTGCAATTTC TTCAGTAATGTCTGGGGAAACCTAAAGGGCTTAGAAAACTGGCTCCTCAAGAGTCAGCAA CAGGAAATTCCTGAAAAACCAAGTTATCAAAACTGTAACAGCCATTCCACTACTAGTCAT TTCTCCATTGAAATGGAAAAGTTTGAAGATCTAAAGCTTCCTGATCAAGATGAGATGGAC CTATCAGATTGGCTGGTGACTCCCCAGGAATCCCATAAGCTGAGGAAGCCTGAGAATGGC AGTTGTGAAACCAGTGAGAAGTTTAAGCTCTTATTCCAGTCCTATAATGTGAATGATTGG CTTGTCAAGACTTACTCCTGTACCAACTGTCAGGGAAACCAGCCCCAAACTGTGGGGATT GAAAACCTGGGCAATCTGAAGTGTCTGAATGACCACTTGGAGGCCAAGAAACCATTGTTC ACCCTCAGCATGGTTACAGAGGATTGGCTTGTCCAGAACCATCAGGACCCATGTAAGGCA GAAGAGGTGTGCAGAGCCAATGAGCCCTGTACAAGCTCTGCAGAGTGTGTGTGTGATGAG AGCTGTGAGAAGGAGGCTCTGTATAAGTGGCTTCTGAAGAAAGAAGGAAAGGATAAAAAT GGGATGCCCGTGGAACCCAAACCTGAGCCTGAGAAGCATAAAGATTCCCTGAATATGTGG CTCTGTCCTTCTAGAAAAGAATTAATAGAACAAACTAAGCACCAAAGGCAGTGGTTCCTT CTAGAATTGCTGATTCCTTCCAAGTCATAA >chr10_random_2|SGP_v1.0_predicted_protein_2|330_AA MAHASSSNIGPFLDKRSYNPMPEQKSASSIVAVPLSEWLLGSQPASGHQAPYIPSTNPQD WLTQKQTLENSQTSFRACNFFSNVWGNLKGLENWLLKSQQQEIPEKPSYQNCNSHSTTSH FSIEMEKFEDLKLPDQDEMDLSDWLVTPQESHKLRKPENGSCETSEKFKLLFQSYNVNDW LVKTYSCTNCQGNQPQTVGIENLGNLKCLNDHLEAKKPLFTLSMVTEDWLVQNHQDPCKA EEVCRANEPCTSSAECVCDESCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMW LCPSRKELIEQTKHQRQWFLLELLIPSKS* # Gene 3 (Forward). 2 exons. 72 aa. Score = 16.13 First 53352 53367 6.36 + 0 1 9.83 -0.28 2.53 -5.60 AA 1: 6 chr10_random_3 Terminal 68980 69179 9.76 + 2 0 1.84 0.00 13.84 2.72 AA 6: 72 chr10_random_3 >chr10_random_3|SGP_v1.0_predicted_cDNA_3|216_NN ATGGACTCGCGCCAGAGATATGTTTTAGGTGTATTCAGAGGGTTAAAGCTCATTAAGATA CCAGATGAAACTTGCAAGTACATCTCCATTACCGCAGTTAATAATTATACAATTTCTCAA TCTGCAGAAGGCCGCTTCAGTCGGAAAAACCAATACAACCATAATCCTTTATCTTTAGAG TGGTCAGAGTCTGATGAATGGGTCAAAGATTTCTAA >chr10_random_3|SGP_v1.0_predicted_protein_3|72_AA MDSRQRYVLGVFRGLKLIKIPDETCKYISITAVNNYTISQSAEGRFSRKNQYNHNPLSLE WSESDEWVKDF* # Gene 4 (Reverse). 2 exons. 66 aa. Score = 19.39 Terminal 83564 83697 12.15 - 2 0 0.00 4.46 12.66 2.85 AA 22: 66 chr10_random_4 Internal 87374 87437 7.24 - 0 1 1.51 6.84 4.62 3.98 AA 1: 22 chr10_random_4 >chr10_random_4|SGP_v1.0_predicted_cDNA_4|198_NN GATAATGAATTGGAAAAGATCACAAGGAGGTTCACCATGGAGCTAGCAAAAAAGGGCTTT ATTGCCATTGCTGAAGCCATAAAGAAAGCCCAAGAGTCAGGGGACAAAAAGATGAAGGAA ATCACTGAGACAGTGACCAACACAGTCACAAATGCCATCACCCATGCAGCAGAGAGTCTG GACAAACTTGGACAGTGA >chr10_random_4|SGP_v1.0_predicted_protein_4|66_AA DNELEKITRRFTMELAKKGFIAIAEAIKKAQESGDKKMKEITETVTNTVTNAITHAAESL DKLGQ*