## date Tue Jul 27 20:33:20 2004 ## source-version: geneid v 1.2 -- geneid@imim.es # Sequence chr3_random - Length = 970716 bps # Optimal Gene Structure. 10 genes. Score = 138.02 # Gene 1 (Forward). 12 exons. 413 aa. Score = 13.38 Internal 7245 7316 0.36 + 0 0 5.10 2.69 2.97 0.00 AA 1: 24 chr3_random_1 Internal 25606 25677 0.52 + 0 0 4.00 3.24 4.17 0.00 AA 25: 48 chr3_random_1 Internal 26480 26568 -0.57 + 0 2 3.94 0.60 5.51 0.00 AA 49: 78 chr3_random_1 Internal 30937 31042 3.24 + 1 0 6.37 2.70 8.26 0.00 AA 78:113 chr3_random_1 Internal 46011 46131 1.41 + 0 1 3.11 3.96 6.67 0.00 AA 114:154 chr3_random_1 Internal 54417 54496 0.91 + 2 0 3.74 1.30 8.46 0.00 AA 154:180 chr3_random_1 Internal 55103 55202 0.18 + 0 1 2.80 1.18 8.24 0.00 AA 181:214 chr3_random_1 Internal 57026 57150 2.52 + 2 0 3.47 3.18 10.08 0.00 AA 214:255 chr3_random_1 Internal 59776 59880 2.33 + 0 0 5.74 1.75 8.34 0.00 AA 256:290 chr3_random_1 Internal 62888 63014 1.48 + 0 1 4.33 2.55 7.12 0.00 AA 291:333 chr3_random_1 Internal 68140 68321 2.22 + 2 0 2.00 4.82 9.07 0.00 AA 333:393 chr3_random_1 Terminal 88199 88258 -1.23 + 0 0 6.17 0.00 1.43 0.00 AA 394:413 chr3_random_1 >chr3_random_1|geneid_v1.2_predicted_cDNA_1|1239_NN GACTGCACAAATCCACGGTACTTAGCTGCAGGTTCTTCCAATGCTGTCAAGCTCAGTAGG TTTTTTGATAAGTACATTTCTGGATTTGGGAATGAGTGTTCTTCAGAGGATCCTCGCTGC CCAGGTTCCCTGCCAGAAGGACAGAATAATCCTCAGGTCTGCCCCTACAATCTCTATGCT GAGCAGCTCTCAGGATCGGCTTTCACTTGTCCACGGAGCACCAATAAGAGAAGCTGGCTG TATAGGATTCTACCTTCAGTTTCTCACAAGCCCTTTGAATCCATTGACGAAGGCCAAGTC ACTCACAACTGGGATGAAGTTGATCCTGATCCTAACCAGGGCCAACAGATAAATGACTCC TCTCCCTATACTATCTCTGTCATTTGGTGGGGATCATTTTTTGCATTAGAGAAGGTTCGT CAAGGTCGTTGCTTCTTCCGGATTGTGGGCCCTATTGAAGTTCCGCAGAAAGGGAACCTT CTCATTTACACCGAGTTTGGCAAGATGCTTGTACAGCCCAATGAGATCTGCGTCATTCAG AGAGGAATGCGGTTCAGCATAGATGTCTTTGAGGAGACCAGGGGCTACATCTTGGAGGTC TATGGTGTCCACTTTGAGTTACCTGACCTTGGACCAATTGGGGCCAATGGCTTGGCCAAT CCTCGTGATTTCTTGATACCCATTGCCTGGTATGAGGATCGCCAAGTACCAGGTGGTTAC ACGGTCATTAATAAATACCAGGGCAAGCTGTTTGCTGCCAAACAGGATGTCTCCCCGTTC AATGTTGTGGCCTGGCACGGGAATTATACACCCTACAAGTACAACCTGAAGAATTTCATG GTTATCAACTCAGTGGCCTTTGACCATGCAGACCCATCCATTTTCACAGTATTGACTGCT AAGTCTGTCCGCCCTGGAGTGGCCATTGCTGATTTTGTCATCTTCCCACCTCGATGGGGG GTTGCTGATAAGACCTTCAGGCCTCCTTATTACCATAGGAACTGCATGAGTGAGTTCATG GGACTCATCCGAGGTCACTATGAGGCAAAGCAAGGTGGGTTCCTGCCAGGGGGAGGGAGT CTACACAGCACAATGACCCCCCATGGACCTGATGCTGACTGCTTTGAGAAGGCCAGCAAG GTCAAGCTGGCACCTGAGAGGATTGCCGATGGCACCATGGCCTCACATGCATGTTCCAGG TCAAAGGAAGGGGGAGAAACCAAAATGATGAATGAATAG >chr3_random_1|geneid_v1.2_predicted_protein_1|413_AA DCTNPRYLAAGSSNAVKLSRFFDKYISGFGNECSSEDPRCPGSLPEGQNNPQVCPYNLYA EQLSGSAFTCPRSTNKRSWLYRILPSVSHKPFESIDEGQVTHNWDEVDPDPNQGQQINDS SPYTISVIWWGSFFALEKVRQGRCFFRIVGPIEVPQKGNLLIYTEFGKMLVQPNEICVIQ RGMRFSIDVFEETRGYILEVYGVHFELPDLGPIGANGLANPRDFLIPIAWYEDRQVPGGY TVINKYQGKLFAAKQDVSPFNVVAWHGNYTPYKYNLKNFMVINSVAFDHADPSIFTVLTA KSVRPGVAIADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGGFLPGGGS LHSTMTPHGPDADCFEKASKVKLAPERIADGTMASHACSRSKEGGETKMMNE* # Gene 2 (Reverse). 4 exons. 170 aa. Score = 8.11 Terminal 99268 99330 0.24 - 0 0 0.00 7.18 3.56 0.00 AA 150:170 chr3_random_2 Internal 100281 100427 1.91 - 0 0 4.55 4.83 4.47 0.00 AA 101:149 chr3_random_2 Internal 104999 105259 4.76 - 0 0 1.96 2.10 18.30 0.00 AA 14:100 chr3_random_2 First 105319 105357 1.21 - 0 0 3.54 2.80 6.00 0.00 AA 1: 13 chr3_random_2 >chr3_random_2|geneid_v1.2_predicted_cDNA_2|510_NN ATGCGCATATCACCGAACGAACGCGCCGTGTTCGGGAAGGCGCACTTCCTGAAGCTGAAG GTCAGCATAGACAAAGGGCCTCAGAATCGCGCAGGCGCAATTGTGCCCTGGTTCGCCAAG ATGTCGTTCCCAAAGTATAAGCCGTCGAGCCTGCGCACTCTGCCTGAGACCCTCGACCCA GCCGAATACAACATATCTCCGGAAACCCGGCGGGCGCAAGCCGAGCGGTTGGCCATAAGA GCCCAGCTGAAACGAGAGTACCTGCTTCAGTACAACGATCCCAACCGCCGAGGGCTCATC GAAAATCCTGCCTTGCTTCGTTGGGCCTATGCAAGAACAATAAATGTCTATCCTAATTTC AGACCCACTCCTAAAAACTCACTCATGGGAGCTCTGTGTGGATTTGGGCCCCTCATCTTC ATTTATTATATTATCAAAACTGAGAGGGATAGGAAAGAAAAACTTATCCAGGAAGGAAAA TTGGATCGAACATTTCACCTCTCATATTAA >chr3_random_2|geneid_v1.2_predicted_protein_2|170_AA MRISPNERAVFGKAHFLKLKVSIDKGPQNRAGAIVPWFAKMSFPKYKPSSLRTLPETLDP AEYNISPETRRAQAERLAIRAQLKREYLLQYNDPNRRGLIENPALLRWAYARTINVYPNF RPTPKNSLMGALCGFGPLIFIYYIIKTERDRKEKLIQEGKLDRTFHLSY* # Gene 3 (Reverse). 5 exons. 180 aa. Score = 15.64 Terminal 477337 477383 0.59 - 2 0 0.00 7.50 3.98 0.00 AA 165:180 chr3_random_3 Internal 479459 479626 3.93 - 2 1 1.87 1.04 19.20 0.00 AA 109:165 chr3_random_3 Internal 484133 484227 1.41 - 1 1 1.05 1.08 14.08 0.00 AA 77:109 chr3_random_3 Internal 490235 490342 1.75 - 1 2 1.53 4.81 8.61 0.00 AA 41: 77 chr3_random_3 First 503345 503466 7.97 - 0 2 3.70 7.65 15.39 0.00 AA 1: 41 chr3_random_3 >chr3_random_3|geneid_v1.2_predicted_cDNA_3|540_NN ATGGCGGCCTCGACGGCCTCGCACCGGCCCATCAAGGGGATCTTGAAGAACAAGACCTCT ACGACTTCCTCTATGGTGGCGTCGGCCGAACAGCCCCGCGGGAATGTCGACGAGGAGCTG AGCAAAAAATCCCAGAAGTGGGATGAAATGAACATCTTGGCGACGTATCATCCAGCAGAC AAAGACTATGGTTTAATGAAAATAGATGAACCAAGCACTCCTTACCATAGATTAGCTGCA GCTGAAGGCTTGGAGCCAAAGTATCGGATTCAGGAACAAGAAAGCAGTGGAGAGGAGGAT AGTGACCTCTCACCTGAAGAACGAGAAAAAAAGCGACAATTTGAAATGAAAAGGAAGCTT CACTACAATGAAGGACTCAATATCAAACTAGCCAGACAATTAATTTCAAAAGACCTACAT GATGATGATGAAGATGAAGAAATGTTAGAGACTGCAGATGGAGAAAGCATGAATACGGAA GAATCAAATCAAGGATCTACTCCAAGTGACCAACAGCAAAACAAATTACGAAGTTCATAG >chr3_random_3|geneid_v1.2_predicted_protein_3|180_AA MAASTASHRPIKGILKNKTSTTSSMVASAEQPRGNVDEELSKKSQKWDEMNILATYHPAD KDYGLMKIDEPSTPYHRLAAAEGLEPKYRIQEQESSGEEDSDLSPEEREKKRQFEMKRKL HYNEGLNIKLARQLISKDLHDDDEDEEMLETADGESMNTEESNQGSTPSDQQQNKLRSS* # Gene 4 (Forward). 1 exons. 66 aa. Score = 1.10 Single 515051 515248 1.10 + 0 0 5.10 0.00 7.61 0.00 AA 1: 66 chr3_random_4 >chr3_random_4|geneid_v1.2_predicted_cDNA_4|198_NN ATGAAGGTTGACCTGTGCAGTTTCAGCAGGTACAAGATCTACCCCGGACACGGGAGGCGC CACGCCAGGACCGACGGGAGGGTTTTCCAGTTTCTTAATTCAAAATGCAAGTTGGCGTTC CTTTCCAAGAGGAATCCTCCGCAGATAAACTGGACTGTCCTCTACAGAAGGAAGCACAAA AAGGGGCAGTCGGAGTAA >chr3_random_4|geneid_v1.2_predicted_protein_4|66_AA MKVDLCSFSRYKIYPGHGRRHARTDGRVFQFLNSKCKLAFLSKRNPPQINWTVLYRRKHK KGQSE* # Gene 5 (Reverse). 8 exons. 457 aa. Score = 13.53 Terminal 516712 517119 1.49 - 0 0 0.00 0.83 16.24 0.00 AA 322:457 chr3_random_5 Internal 526070 526356 4.35 - 2 0 3.70 1.14 17.37 0.00 AA 226:321 chr3_random_5 Internal 526395 526432 -2.24 - 1 1 3.21 0.20 3.04 0.00 AA 213:226 chr3_random_5 Internal 529346 529577 5.10 - 2 2 -0.50 2.72 21.92 0.00 AA 136:213 chr3_random_5 Internal 531719 531807 -2.52 - 1 1 1.16 -0.91 5.84 0.00 AA 106:136 chr3_random_5 Internal 534292 534413 4.24 - 0 2 4.55 4.76 9.13 0.00 AA 66:106 chr3_random_5 Internal 538840 538911 1.08 - 0 0 2.68 2.50 7.41 0.00 AA 42: 65 chr3_random_5 First 539781 539903 2.02 - 0 0 2.73 1.93 10.55 0.00 AA 1: 41 chr3_random_5 >chr3_random_5|geneid_v1.2_predicted_cDNA_5|1371_NN ATGGTGATGCTGCTGCTGCTGCTTTCCGCACTGGCTGGCCTCTTCGGTGCGGCAGAGGGA CAAGCATTTCATCTTGGGAAGTGCCCCAATCCTCCGGTGCAGGAGAATTTTGACGTGAAT AAGGAGAAGGTTTGGATCTCTTTTAAGAATGGCAACAGTAACATCGAAGTTGTTATCATA CACTCGCACCTCAAGTATCTCGGAAGATGGTACGAAATTGAGAAGATCCCAACAACCTTT GAGAATGGACGCTGCATCCAGGCCAACTACTCACTAATGGAAAACGGAAAGATCAAAGTG TTAAACCAGGAGTTGAGAGCTGATGGAACTGTGAATCAAATCGAAGGTGAAGCCACCCCA GTTAACCTCACAGAGCCTGCCAAGCTGGAAGTTAAGTTTTCCTGGTTTATGCCATCGGCA CCGTACTGGATCCTGGCCACCGACTATGAGAACTATGCCCTCGTGTATTCCTGTACCTGC ATCATCCAACTTTTTCACGTGGATTTTGCTTGGATCTTGGCAAGAAACCCTAATCTCCCT CCAGAAACAGTGGACTCTCTAAAAAATATCCTGACTTCTAATAACATTGATGTCAAGAAA ATGACGGTCACAGACCAGGTGAACTGCCCCAAGCTCTCTTGTAAGAACTACGAAGCCACA CTCACTGCCGGGGGAGAGCTAGAATCTAAAGCATGTGGCTCTACCTCCCCAGCCACCCCT GATTGGACCAATATGTGTCCACCTGAGCTAGCAACAGCCAATCCACAGGCTGAACAGAAA CCTCTGACTTCTATGGCCTCGCTGGATGGAAATGATAAACTGAGACAATCAAATAAGAGT TTGACTTTAAGCAGTCTGGAAAGAGGATCATTGAAAGCTCTGGTACTGCAAGGTCATGTG GCTTGTAGTGGCCACTACCGGCCATGCACTACTGAAGTGATGTGTGCGGAACAGAAACGC AGGGTGACTGCAAGCAAGTTGTCTCAAGCATTTACAGCTGGGATCCACCCAGAAACGATC ATCGTTAAGAGTCTCCACGTGTCAGCTCAGCGTCTCATCCACAGCAGCGCCCCCAGCTGC CTGCTGATGGCTCCATCCCCAACTCAGTCTTCGTGGCTCCGCATCCATCGTAGTACAAAC ACTATGCCTTTGGAGAGGACTGCCTTAGAGTCCACAGCTAACGTCTATAGAAATCTAGCA ATTCTATCAAGAAAAAGCAAAATTAAAATGCCAAAAATCAGGCAAAAAGAAAAGAAAAAA GCACAGGATACTCCCAATAGGTGCCAAAAGAGAAATGATTTAGGTACAGTGTGTTGGGGA GAACTGACCTGGAGCCTGCTGGAGTTGCTCAGAGTCTACAGGGAAAGATAA >chr3_random_5|geneid_v1.2_predicted_protein_5|457_AA MVMLLLLLSALAGLFGAAEGQAFHLGKCPNPPVQENFDVNKEKVWISFKNGNSNIEVVII HSHLKYLGRWYEIEKIPTTFENGRCIQANYSLMENGKIKVLNQELRADGTVNQIEGEATP VNLTEPAKLEVKFSWFMPSAPYWILATDYENYALVYSCTCIIQLFHVDFAWILARNPNLP PETVDSLKNILTSNNIDVKKMTVTDQVNCPKLSCKNYEATLTAGGELESKACGSTSPATP DWTNMCPPELATANPQAEQKPLTSMASLDGNDKLRQSNKSLTLSSLERGSLKALVLQGHV ACSGHYRPCTTEVMCAEQKRRVTASKLSQAFTAGIHPETIIVKSLHVSAQRLIHSSAPSC LLMAPSPTQSSWLRIHRSTNTMPLERTALESTANVYRNLAILSRKSKIKMPKIRQKEKKK AQDTPNRCQKRNDLGTVCWGELTWSLLELLRVYRER* # Gene 6 (Forward). 4 exons. 485 aa. Score = 9.67 First 579300 580372 7.56 + 0 2 -1.19 -0.64 34.16 0.00 AA 1:358 chr3_random_6 Internal 580465 580671 3.81 + 1 2 0.39 6.29 12.00 0.00 AA 358:427 chr3_random_6 Internal 588058 588106 -0.76 + 1 0 3.64 2.75 1.03 0.00 AA 427:443 chr3_random_6 Terminal 588594 588719 -0.94 + 0 0 3.03 0.00 5.59 0.00 AA 444:485 chr3_random_6 >chr3_random_6|geneid_v1.2_predicted_cDNA_6|1455_NN ATGGTGCTGATCGCCACCTCCGTGGAGACATCAGCCGCCAGTGGCAGCCCCGAGGGAGCT GGAATGACCACAGTTCAGACCATCACAGGCAGTGATCCCAGGGAAGCCATCTTTGACACC CTTTGCACCGATGACATCTCTGAAGAGGCAAAGACACTCACAATGGACATATTGACATTG GCTCACACCTCCACAGAAGCTAAGGGCCTGTCCTCAGAGAGCAGCGCCTCTTCCGACGGC CCCCATCCAGTCATCACCCCGTCACGGGCCTCAGAGAGCAGCGCCTCTTCCGACGGCCCC CATCCAGTCATCACCCCGTCACGGGCCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCAT CCAGTCATCACCCCGTCACGGGCCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCA GTCATCACCCCGTCACGGGCCTCAGAGAGCAGCGCCTCTTCCGACGGCCTCCATCCAGTC ATCACCCCGTCACGGGCCTCAGAGAGCAGCGCCTCTTCCGACGGCCTCCATCCAGTCATC ACCCCGTCACGGGCCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACC CCCTCATGGTCCCCGGGATCTGACGTCACTCTCCTCGCTGAAGCCCTGGTGACTGTCACA AACATCGAGGTTATTAATTGCAGCATCACAGAAATAGAAACAACGACTTCCAGCATCCCT GGGGCCTCAGACACAGATCTCATCCCCACGGAAGGGGTGAAGGCCTCGTCCACCTCCGAT CCACCAGCTCTGCCTGACTCCACTAACACAAAACCACACATCACTGAGGTCACAGCCTCT GCCGAGACCCTGTCCACAGCCGGCACCACAGAGTCAGCTGCACCTGATGCCACGATTGGG ACCCCACTCCCCACCAACAGCACCATAGAAAGAGAAGTGACAGCACCCGGGGCCACGACC CTCAGTGGAGCTCTGGCCACAGGGAATCCCCTGGAAGAAACCTCAGCCCTCTCTGTTGAG ACACCAAGTTACGTCAAAGTCTCAGGAGCAGCTCCGGTCTCCATAGAGGCTGGAGACACT GACCACGGACATCGCAACCAAGGGGCCCTTCCCCACCAGCAGGGCCCCTCTTCCTTCTGT CCCTCCGACTACAACCAACAGCAGCTGAAGGACGAACAGCATCTTAGCCAAGACCACAAC CTCAGCGAAGACCACGATGAAGCCCCCAACAGCCACGCCCACCACTGCTCGGACGAGGCC GACCACAGACATGAGTGCAGTGTTTTGGAAGGAGAATCTGAGGCCAGAATGATGGCTCCT CCAGAGAGGGAAGAGAATCCCCGCTCAGAAGAAAGGAGGACCACCCCCGATGACGGCAGG TGGCCCCAAGTGTTTGGATGCGGTGGGCCCCACTGGTTTGGGCCTAACCTCAAGCGGCTG CTAATGGTTCCATGA >chr3_random_6|geneid_v1.2_predicted_protein_6|485_AA MVLIATSVETSAASGSPEGAGMTTVQTITGSDPREAIFDTLCTDDISEEAKTLTMDILTL AHTSTEAKGLSSESSASSDGPHPVITPSRASESSASSDGPHPVITPSRASESSASSDGPH PVITPSRASESSASSDGPHPVITPSRASESSASSDGLHPVITPSRASESSASSDGLHPVI TPSRASESSASSDGPHPVITPSWSPGSDVTLLAEALVTVTNIEVINCSITEIETTTSSIP GASDTDLIPTEGVKASSTSDPPALPDSTNTKPHITEVTASAETLSTAGTTESAAPDATIG TPLPTNSTIEREVTAPGATTLSGALATGNPLEETSALSVETPSYVKVSGAAPVSIEAGDT DHGHRNQGALPHQQGPSSFCPSDYNQQQLKDEQHLSQDHNLSEDHDEAPNSHAHHCSDEA DHRHECSVLEGESEARMMAPPEREENPRSEERRTTPDDGRWPQVFGCGGPHWFGPNLKRL LMVP* # Gene 7 (Forward). 4 exons. 445 aa. Score = 26.78 First 868112 868161 -2.95 + 0 2 0.68 2.48 0.38 0.00 AA 1: 17 chr3_random_7 Internal 870296 870404 1.87 + 1 0 5.21 4.05 4.54 0.00 AA 17: 53 chr3_random_7 Internal 873703 874694 24.78 + 0 2 5.28 1.23 64.68 0.00 AA 54:384 chr3_random_7 Terminal 875903 876086 3.08 + 1 0 6.71 0.00 11.38 0.00 AA 384:445 chr3_random_7 >chr3_random_7|geneid_v1.2_predicted_cDNA_7|1335_NN ATGCCAGGGTCAGGAGATTCCAGAAGTGGCAGCAAGCTCAGTGTTACCAGGAAACTTTAT TTCCTACTTCTGCATGCCAAGTTTCTACCTCTAGATCTGTTTGGTTCAGTTGCTGAGAAG CCTGACATACCAGGACTGCCTGAGACAAGCCACAAGCTGAACAGAGAAAGTGGATTGAAC AAGGACGCATTTCCCCAGTACATCCACAACATGCTGTCCACATCTCGTTCTCGGTTTATC AGAAATACCAACGAGAGCGGTGAAGAAGTCACCACCTTTTTTGATTATGATTACGGTGCT CCCTGTCATAAATTTGACGTGAAGCAAATTGGGGCCCAACTCCTGCCTCCGCTCTACTCG CTGGTGTTCATCTTTGGTTTTGTGGGCAACATGCTGGTCGTCCTCATCTTAATAAACTGC AAAAAGCTGAAGTGCTTGACTGACATTTACCTGCTCAACCTGGCCATCTCTGATCTGCTT TTTCTTATTACTCTCCCATTGTGGGCTCACTCTGCTGCAAATGAGTGGGTCTTTGGGAAT GCAATGTGCAAATTATTCACAGGGCTGTATCACATCGGTTATTTTGGCGGAATCTTCTTC ATCATCCTCCTGACAATCGATAGATACCTGGCTATTGTCCATGCTGTGTTTGCTTTAAAA GCCAGGACGGTCACCTTTGGGGTGGTGACAAGTGTGATCACCTGGTTGGTGGCTGTGTTT GCTTCTGTCCCAGGAATCATCTTTACTAAATGCCAGAAAGAAGATTCTGTTTATGTCTGT GGCCCTTATTTTCCACGAGGATGGAATAATTTCCACACAATAATGAGGAACATTTTGGGG CTGGTCCTGCCGCTGCTCATCATGGTCATCTGCTACTCGGGAATCCTGAAAACCCTGCTT CGGTGTCGAAACGAGAAGAAGAGGCATAGGGCAGTGAGAGTCATCTTCACCATCATGATT GTTTACTTTCTCTTCTGGACTCCCTATAACATTGTCATTCTCCTGAACACCTTCCAGGAA TTCTTCGGCCTGAGTAACTGTGAAAGCACCAGTCAACTGGACCAAGCCACGCAGGTGACA GAGACTCTTGGGATGACTCACTGCTGCATCAATCCCATCATCTATGCCTTCGTTGGGGAG AAGTTCAGAAGCCTTTTTCACATAGCTCTTGGCTGTAGGATTGCCCCACTCCAAAAACCA GTGTGTGGAGGTCCAGGAGTGAGACCAGGAAAGAATGTGAAAGTGACTACACAAGGACTC CTCGATGGTCGTGGAAAAGGAAAGTCAATTGGCAGAGCCCCTGAAGCCAGTCTTCAGGAC AAAGAAGGAGCCTAG >chr3_random_7|geneid_v1.2_predicted_protein_7|445_AA MPGSGDSRSGSKLSVTRKLYFLLLHAKFLPLDLFGSVAEKPDIPGLPETSHKLNRESGLN KDAFPQYIHNMLSTSRSRFIRNTNESGEEVTTFFDYDYGAPCHKFDVKQIGAQLLPPLYS LVFIFGFVGNMLVVLILINCKKLKCLTDIYLLNLAISDLLFLITLPLWAHSAANEWVFGN AMCKLFTGLYHIGYFGGIFFIILLTIDRYLAIVHAVFALKARTVTFGVVTSVITWLVAVF ASVPGIIFTKCQKEDSVYVCGPYFPRGWNNFHTIMRNILGLVLPLLIMVICYSGILKTLL RCRNEKKRHRAVRVIFTIMIVYFLFWTPYNIVILLNTFQEFFGLSNCESTSQLDQATQVT ETLGMTHCCINPIIYAFVGEKFRSLFHIALGCRIAPLQKPVCGGPGVRPGKNVKVTTQGL LDGRGKGKSIGRAPEASLQDKEGA* # Gene 8 (Forward). 1 exons. 353 aa. Score = 7.04 Single 889131 890189 7.04 + 0 0 -0.24 0.00 31.71 0.00 AA 1:353 chr3_random_8 >chr3_random_8|geneid_v1.2_predicted_cDNA_8|1059_NN ATGGATTATCAAGTGTCAAGTCCAATCTATGACATCAATTATTATACATCGGAGCCCTGC CAAAAAATCAATGTGAAGCAAATCGCAGCCCGCCTCCTGCCTCCGCTCTACTCACTGGTG TTCATCTTTGGTTTTGTGGGCAACATGCTGGTCATCCTCATCCTGATAAACTGCAAAAGG CTGAAGAGCATGACTGACATCTACCTGCTCAACCTGGCCATCTCTGACCTGTTTTTCCTT CTTACTGTCCCCTTCTGGGCTCACTATGCTGCCGCCCAGTGGGACTTTGGAAATACAATG TGTCAACTCTTGACAGGGCTCTATTTTATAGGCTTCTTCTCTGGAATCTTCTTCATCATC CTCCTGACAATCGATAGGTACCTGGCTGTCGTCCATGCTGTGTTTGCTTTAAAAGCCAGG ACGGTCACCTTTGGGGTGGTGACAAGTGTGATCACTTGGGTGGTGGCTGTGTTTGCGTCT CTCCCAGGAATCATCTTTACCAGATCTCAAAAAGAAGGTCTTCATTACACCTGCAGCTCT CATTTTCCATACAGTCAGTATCAATTCTGGAAGAATTTCCAGACATTAAAGATAGTCATC TTGGGGCTGGTCCTGCCGCTGCTTGTCATGGTCATCTGCTACTCGGGAATCCTAAAAACT CTGCTTCGGTGTCGAAATGAGAAGAAGAGGCACAGGGCTGTGAGGCTTATCTTCACCATC ATGATTGTTTATTTTCTCTTCTGGGCTCCCTACAACATTGTCCTTCTCCTGAACACCTTC CAGGAATTCTTTGGCCTGAATAATTGCAGTAGCTCTAACAGGTTGGACCAAGCTATGCAG GTGACAGAGACTCTTGGGATGACGCACTGCTGCATCAACCCCATCATCTATGCCTTTGTC GGGGAGAAGTTCAGAAACTACCTCTTAGTCTTCTTCCAAAAGCACATTGCCAAACGCTTC TGCAAATGCTGTTCTATTTTCCAGCAAGAGGCTCCCGAGCGAGCAAGCTCAGTTTACACC CGATCCACTGGGGAGCAGGAAATATCTGTGGGCTTGTGA >chr3_random_8|geneid_v1.2_predicted_protein_8|353_AA MDYQVSSPIYDINYYTSEPCQKINVKQIAARLLPPLYSLVFIFGFVGNMLVILILINCKR LKSMTDIYLLNLAISDLFFLLTVPFWAHYAAAQWDFGNTMCQLLTGLYFIGFFSGIFFII LLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPGIIFTRSQKEGLHYTCSS HFPYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRCRNEKKRHRAVRLIFTI MIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVTETLGMTHCCINPIIYAFV GEKFRNYLLVFFQKHIAKRFCKCCSIFQQEAPERASSVYTRSTGEQEISVGL* # Gene 9 (Forward). 3 exons. 415 aa. Score = 15.66 First 917368 917451 -0.04 + 0 0 -0.07 4.60 6.86 0.00 AA 1: 28 chr3_random_9 Internal 923599 923712 0.17 + 0 0 3.56 4.21 1.29 0.00 AA 29: 66 chr3_random_9 Terminal 924278 925324 15.53 + 0 0 5.54 0.00 43.01 0.00 AA 67:415 chr3_random_9 >chr3_random_9|geneid_v1.2_predicted_cDNA_9|1245_NN ATGACAGAATGGGAATATGATGGAATTAAGTGGCTTTATGTGTTCCAAAAGGATTGGTCC ACGCAGGCCACAGGAAAATGGGAGGGTCAGGAGCAGTCTGATCAAAAGGAGGGCATCCAC TGTCCGGGGCCATTCCCACAGCTCCCGGATGCTGGGTCTGGAGGCTGCGCCCTTCCCCTG CAGGAGCTCAGCCCAGTGGGCAGTCTGAAGATGGCCAATTACACGCTGGCACCAGAGGAT GAATATGATGTCCTCATAGAAGGTGAACTGGAGAGCGATGAGGCAGAGCAATGTGACAAG TATGACGCCCAGGCACTCTCAGCCCAGCTGGTGCCATCACTCTGCTCTGCTGTGTTTGTG ATCGGTGTCCTGGACAATCTCCTGGTTGTGCTTATCCTGGTAAAATATAAAGGACTCAAA CGCGTGGAAAATATCTATCTTCTAAACTTGGCAGTTTCTAACTTGTGTTTCTTGCTTACC CTGCCCTTCTGGGCTCATGCTGGGGGCGATCCCATGTGTAAAATTCTCATTGGACTGTAC TTCGTGGGCCTGTACAGTGAGACATTTTTCAATTGCCTTCTGACTGTGCAAAGGTACCTA GTGTTTTTGCACAAGGGCAACTTTTTCTCAGCCAGGAGGAGGGTGCCCTGTGGCATCATT ACAAGTGTCCTGGCATGGGTAACAGCCATTCTGGCCACTTTGCCTGAATACGTGGTTTAT AAACCTCAGATGGAAGACCAGAAATACAAGTGTGCATTTAGCAGAACTCCCTTCCTGCCA GCTGATGAGACATTCTGGAAGCATTTTCTGACTTTAAAAATGAACATTTCGGTTCTTGTC CTCCCCCTATTTATTTTTACATTTCTCTATGTGCAAATGAGAAAAACACTAAGGTTCAGG GAGCAGAGGTATAGCCTTTTCAAGCTTGTTTTTGCCATAATGGTAGTCTTCCTTCTGATG TGGGCGCCCTACAATATTGCATTTTTCCTGTCCACTTTCAAAGAACACTTCTCCCTGAGT GACTGCAAGAGCAGCTACAATCTGGACAAAAGTGTTCACATCACTAAACTCATCGCCACC ACCCACTGCTGCATCAACCCTCTCCTGTATGCGTTTCTTGATGGGACATTTAGCAAATAC CTCTGCCGCTGTTTCCATCTGCGTAGTAACACCCCACTTCAACCCAGGGGGCAGTCTGCA CAAGGCACATCGAGGGAAGAACCTGACCATTCCACCGAAGTGTAA >chr3_random_9|geneid_v1.2_predicted_protein_9|415_AA MTEWEYDGIKWLYVFQKDWSTQATGKWEGQEQSDQKEGIHCPGPFPQLPDAGSGGCALPL QELSPVGSLKMANYTLAPEDEYDVLIEGELESDEAEQCDKYDAQALSAQLVPSLCSAVFV IGVLDNLLVVLILVKYKGLKRVENIYLLNLAVSNLCFLLTLPFWAHAGGDPMCKILIGLY FVGLYSETFFNCLLTVQRYLVFLHKGNFFSARRRVPCGIITSVLAWVTAILATLPEYVVY KPQMEDQKYKCAFSRTPFLPADETFWKHFLTLKMNISVLVLPLFIFTFLYVQMRKTLRFR EQRYSLFKLVFAIMVVFLLMWAPYNIAFFLSTFKEHFSLSDCKSSYNLDKSVHITKLIAT THCCINPLLYAFLDGTFSKYLCRCFHLRSNTPLQPRGQSAQGTSREEPDHSTEV* # Gene 10 (Reverse). 12 exons. 515 aa. Score = 27.10 Terminal 952430 952464 -1.22 - 2 0 0.00 5.38 1.39 0.00 AA 504:515 chr3_random_10 Internal 954176 954365 2.77 - 0 1 2.90 5.40 6.97 0.00 AA 441:504 chr3_random_10 Internal 955532 955716 5.53 - 2 0 3.52 6.54 11.25 0.00 AA 379:440 chr3_random_10 Internal 957654 957721 -0.60 - 1 1 3.16 2.50 3.76 0.00 AA 356:379 chr3_random_10 Internal 959671 959812 6.62 - 2 2 3.86 6.06 14.17 0.00 AA 309:356 chr3_random_10 Internal 961511 961666 2.45 - 2 1 3.03 2.97 9.63 0.00 AA 257:309 chr3_random_10 Internal 962670 962723 1.33 - 2 1 5.16 4.40 1.48 0.00 AA 239:257 chr3_random_10 Internal 963538 963628 0.96 - 0 1 2.36 3.44 6.21 0.00 AA 209:239 chr3_random_10 Internal 965093 965247 4.51 - 2 0 2.71 4.57 12.86 0.00 AA 157:208 chr3_random_10 Internal 966084 966258 2.84 - 0 1 2.89 3.67 9.77 0.00 AA 99:157 chr3_random_10 Internal 966725 966903 4.92 - 2 0 1.41 4.26 16.29 0.00 AA 39: 98 chr3_random_10 Internal 970209 970323 -3.02 - 0 1 -0.41 5.06 -2.03 0.00 AA 1: 39 chr3_random_10 >chr3_random_10|geneid_v1.2_predicted_cDNA_10|1545_NN ACACCCATGCCTAGGTGCTTGGCAATGCGTCCTCCAGTCCTCCAAGACACATGTGCTCAT GCAGAACAGATTGTGCTGGTTTGTGTTTCCGGTTTCTGGGTTCATAGAGGTTTTAAGGAC CTGTCAGACGAGGCTGAAAGGGACGAGTATGAGTTACTCTGCCCAGACAACACTCGGAAG CCAGTGGACAAGTTCAAAGACTGCCATCTGGCCCGGGTCCCTTCTCATGCCGTTGTGGCA CGAAGTGTGAATGGCAAGGAGGATGCCATCTGGAATCTTCTCCGCCAGGCACAGGAAAAG TTTGGAAAGGACAAGTCACCGAAATTCCAGCTCTTTGGCTCCCCTAGTGGGCAGAAAGAT CTGCTGTTCAAGGACTCTGCCATTGGGTTTTCGAGGGTGCCCCCGAGGATAGATTCTGGG CTGTACCTTGGCTCCGGCTACTTCACTGCCATCCAGAACTTGAGGAAAAGTGAGGAGGAA GTGGCTGCCCGGCGTGCGCGGGTCGTGTGGTGTGCGGTGGGCGAGCAGGAGCTGCGCAAG TGTAACCAGTGGAGTGGCTTGAGCGAAGGCAGCGTGACCTGCTCCTCGGCCTCCACCACA GAGGACTGCATCGCCCTGGTGCTGAAAGGAGAAGCTGATGCCATGAGTTTGGATGGAGGA TATGTGTACACTGCAGGCAAATGTGGTTTGGTGCCTGTCCTGGCAGAGAACTACAAATCC CAACAAAGCAGTGACCCTGATCCTAACTGTGTGGATAGACCTGTGGAAGGATATCTTGCT GTGGCGGTGGTTAGGAGATCAGACACTAGCCTTACCTGGAACTCTGTGAAAGGCAAGAAG TCCTGCCACACCGCCGTGGACAGGACTGCAGGCTGGAATATCCCCATGGGCCTGCTCTTC AACCAGACGGGCTCCTGCAAATTTGATGAATATTTCAGTCAAAGCTGTGCCCCTGGGTCT GACCCGAGATCTAATCTCTGTGCTCTGTGTATTGGCGACGAGCAGGGTGAGAATAAGTGC GTGCCCAACAGCAACGAGAGATACTACGGCTACACTGGGGCTTTCCGGTGCCTGGCTGAG AATGCTGGAGACGTTGCATTTGTGAAAGATGTCACTGTCTTGCAGAACACTGATGGAAAT AACAATGACGCATGGGCTAAGGATTTGAAGCTGGCAGACTTTGCGCTGCTGTGCCTCGAT GGCAAACGGAAGCCTGTGACTGAGGCTAGAAGCTGCCATCTTGCCATGGCCCCGAATCAT GCCGTGGTGTCTCGGATGGATAAGGTGGAACGCCTGAAACAGGTGTTGCTCCACCAACAG GCTAAATTTGGGAGAAATGGATCTGACTGCCCGGACAAGTTTTGCTTATTCCAGTCTGAA ACCAAAAACCTTCTGTTCAATGACAACACTGAGTGTCTGGCCAGACTCCATGGCAAAACA ACATATGAAAAATATTTGGGACCACAGTATGTCGCAGGCATTACTAATCTGAAAAAGTGC TCAACCTCCCCCCTCCTGGAAGCCTGTGAATTCCTCAGGAAGTAA >chr3_random_10|geneid_v1.2_predicted_protein_10|515_AA TPMPRCLAMRPPVLQDTCAHAEQIVLVCVSGFWVHRGFKDLSDEAERDEYELLCPDNTRK PVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLRQAQEKFGKDKSPKFQLFGSPSGQKD LLFKDSAIGFSRVPPRIDSGLYLGSGYFTAIQNLRKSEEEVAARRARVVWCAVGEQELRK CNQWSGLSEGSVTCSSASTTEDCIALVLKGEADAMSLDGGYVYTAGKCGLVPVLAENYKS QQSSDPDPNCVDRPVEGYLAVAVVRRSDTSLTWNSVKGKKSCHTAVDRTAGWNIPMGLLF NQTGSCKFDEYFSQSCAPGSDPRSNLCALCIGDEQGENKCVPNSNERYYGYTGAFRCLAE NAGDVAFVKDVTVLQNTDGNNNDAWAKDLKLADFALLCLDGKRKPVTEARSCHLAMAPNH AVVSRMDKVERLKQVLLHQQAKFGRNGSDCPDKFCLFQSETKNLLFNDNTECLARLHGKT TYEKYLGPQYVAGITNLKKCSTSPLLEACEFLRK*