## date Tue Jul 27 18:38:48 2004 ## source-version: geneid v 1.2 -- geneid@imim.es # Sequence chr12_random - Length = 466818 bps # Optimal Gene Structure. 5 genes. Score = 23.57 # Gene 1 (Forward). 1 exons. 33 aa. Score = 1.16 Terminal 6961 7059 1.16 + 0 0 5.54 0.00 8.34 0.00 AA 1: 33 chr12_random_1 >chr12_random_1|geneid_v1.2_predicted_cDNA_1|99_NN GTGGAGAAAAATAAGGTTGGAGAAATTGGCAATCTTGAGCAAATAAAATATGCTGAGGCT AGCAGCAAGCCAGATGCTGAAATGGTTGATTATTGCTGA >chr12_random_1|geneid_v1.2_predicted_protein_1|33_AA VEKNKVGEIGNLEQIKYAEASSKPDAEMVDYC* # Gene 2 (Forward). 3 exons. 141 aa. Score = 11.91 First 92219 92413 7.38 + 0 0 1.95 1.69 25.49 0.00 AA 1: 65 chr12_random_2 Internal 116311 116494 6.60 + 0 1 5.46 5.38 13.97 0.00 AA 66:127 chr12_random_2 Terminal 143125 143168 -2.07 + 2 0 3.72 0.00 1.76 0.00 AA 127:141 chr12_random_2 >chr12_random_2|geneid_v1.2_predicted_cDNA_2|423_NN ATGGCCCCCGCGGCGGCTCCGTCCTCCTTGGCCGTCAGAGCCTCAAGCCCCGCCGCGACA CCCACCTCGTACGGCGTCTTCTGCAAGGGGCTCTCCCGCACCCTGCTCGCCTTCTTCGAG CTGGCCTGGCAGCTGCGCATGAACTTCCCGTACTTCTACGTCGCGGGCTCGGTGATCCTC AACATCCGATTGCAGGAGAATGATGTAAACCTGACCCACATTGAATCTAGACCTTCTCGT TTAAAGAAAGATGAGTATGAATTTTTCACCCATTTGGATAAACGTAGCCTGCCTGCTCTG ACAAACATCATCAAGATCTTGAGGCATGACATTGGTGCCACTGTCCATGAGCTTTCACGA GATAAGAAGAAAGACACAGCACTGGCCAACAACCACCTTTTACTCATGCAGGGTCCAGTG TAA >chr12_random_2|geneid_v1.2_predicted_protein_2|141_AA MAPAAAPSSLAVRASSPAATPTSYGVFCKGLSRTLLAFFELAWQLRMNFPYFYVAGSVIL NIRLQENDVNLTHIESRPSRLKKDEYEFFTHLDKRSLPALTNIIKILRHDIGATVHELSR DKKKDTALANNHLLLMQGPV* # Gene 3 (Forward). 2 exons. 120 aa. Score = 6.65 First 147889 148083 7.00 + 0 0 1.95 1.69 24.54 0.00 AA 1: 65 chr12_random_3 Terminal 173229 173393 -0.35 + 0 0 2.56 0.00 9.03 0.00 AA 66:120 chr12_random_3 >chr12_random_3|geneid_v1.2_predicted_cDNA_3|360_NN ATGGCCCCCGCGGCGGCTCCGTCCTCCTTGGCCGTCAGGGCCTCAAGCCCCGCCGCGACA CCCACCTCGTACGGCGTCTTCTGCAAGGGGCTCTCCCGCACCCTGCTCGCCTTCTTCGAG CTGGCCTGGCAGCTGCGCATGAACTTCCCGTACTTCTACGTCGCGGGCTCGGTGATCCTC AACATCCGATTGCAGGGAGATAACAAACAAGGAACATTAGATAGGAGAAATGGTAAAGTG AATAGACAACTCCAGGTTAATGAGCATCTGGTCAACAGGAAGGTGGGCTTCATTCACACC GACCTTCCAATAGGAGTTTCTGTTATATTTTATATCAACATTGATCCAGAAATAATTTGA >chr12_random_3|geneid_v1.2_predicted_protein_3|120_AA MAPAAAPSSLAVRASSPAATPTSYGVFCKGLSRTLLAFFELAWQLRMNFPYFYVAGSVIL NIRLQGDNKQGTLDRRNGKVNRQLQVNEHLVNRKVGFIHTDLPIGVSVIFYINIDPEII* # Gene 4 (Reverse). 2 exons. 149 aa. Score = 2.07 Terminal 372244 372477 2.11 - 0 0 0.00 5.33 11.04 0.00 AA 72:149 chr12_random_4 First 391397 391609 -0.04 - 0 0 0.16 6.48 2.43 0.00 AA 1: 71 chr12_random_4 >chr12_random_4|geneid_v1.2_predicted_cDNA_4|447_NN ATGGTGGGGTCGAGTCCGGAGGCGGTGGGGCTGGCTGCGCTGAGCCCGGTAGTGCAAGCT TCCCGGGCCCGCGGGGGAGCAGGGAGCGGCGAGGGGGAGGCTCTCTCTAAGGTCTCGCAT TTGGCAGGTGCGGAGCTTTTGTCCCCTACATCCACTTCCTGCTTCGACAGCCCGGACCCA GGGCCCAGTCCTCTCCAACGCACTTTGCAGAAAGTGGAGAAAAATAAGGTTGGAGAAATT GGCAGTCTTGAGCAAATGAAATATGCTGAGGCTAGTAACACCCACATGCTGAAATGCTTG GTTATTGCTGAGACATTAGAACCAAAAATTCTTACTTCTAATCTATATGAAGCCAAATTA AACACAGTTGCATACCAATGTAATAATATGACCCAGAGTAAACCAATTCTGGACACCACC AGAGCAGTGAGAAATTTGGTCAGCTGA >chr12_random_4|geneid_v1.2_predicted_protein_4|149_AA MVGSSPEAVGLAALSPVVQASRARGGAGSGEGEALSKVSHLAGAELLSPTSTSCFDSPDP GPSPLQRTLQKVEKNKVGEIGSLEQMKYAEASNTHMLKCLVIAETLEPKILTSNLYEAKL NTVAYQCNNMTQSKPILDTTRAVRNLVS* # Gene 5 (Reverse). 1 exons. 43 aa. Score = 1.79 Terminal 425036 425164 1.79 - 0 0 0.00 5.97 9.27 0.00 AA 1: 43 chr12_random_5 >chr12_random_5|geneid_v1.2_predicted_cDNA_5|129_NN GTGGAGAAAAATAAAATTGGAGAAATTGGCAATCTTGAACAAATAAAATATGCTGAGGCT CGTAGCAAGCCAAATGCTGAAATGATTGATTATTGCCGAGACATTAGAAGGAACAATTCT TACTTCTAA >chr12_random_5|geneid_v1.2_predicted_protein_5|43_AA VEKNKIGEIGNLEQIKYAEARSKPNAEMIDYCRDIRRNNSYF*