chr6_hla_hap2	tblastx	hsp	4727	4855	55.1	+	2	Target "chr17_30000001_40002000";	Start 2761752;	End 2761880 - 2
chr6_hla_hap2	tblastx	hsp	4736	4855	73.9	+	2	Target "chr17_30000001_40002000";	Start 2808372;	End 2808491 - 2
chr6_hla_hap2	tblastx	hsp	4738	4821	54.7	-	1	Target "chr17_30000001_40002000";	Start 2808406;	End 2808489 + 1
chr6_hla_hap2	tblastx	hsp	4746	4844	62.0	-	2	Target "chr17_30000001_40002000";	Start 2808383;	End 2808481 + 2
chr6_hla_hap2	tblastx	hsp	4767	4874	73.0	+	3	Target "chr17_30000001_40002000";	Start 2808353;	End 2808460 - 3
chr6_hla_hap2	tblastx	hsp	4771	4875	53.3	+	1	Target "chr17_30000001_40002000";	Start 2808352;	End 2808456 - 1
chr6_hla_hap2	tblastx	hsp	5548	5697	65.2	+	1	Target "chr17_30000001_40002000";	Start 2761309;	End 2761458 - 1
chr6_hla_hap2	tblastx	hsp	5557	5697	53.8	+	1	Target "chr17_30000001_40002000";	Start 2571802;	End 2571942 + 1
chr6_hla_hap2	tblastx	hsp	5557	5811	92.3	+	1	Target "chrUn_random_70000001_80002000";	Start 4769278;	End 4769532 + 1
chr6_hla_hap2	tblastx	hsp	5557	5814	135.8	+	1	Target "chr17_30000001_40002000";	Start 2807526;	End 2807783 - 2
chr6_hla_hap2	tblastx	hsp	5557	5814	145.9	+	1	Target "chr17_30000001_40002000";	Start 2827451;	End 2827708 - 3
chr6_hla_hap2	tblastx	hsp	5560	5679	54.7	-	1	Target "chr17_30000001_40002000";	Start 2647312;	End 2647431 + 1
chr6_hla_hap2	tblastx	hsp	5560	5679	77.6	-	1	Target "chr17_30000001_40002000";	Start 2571805;	End 2571924 - 1
chr6_hla_hap2	tblastx	hsp	5560	5847	169.7	-	1	Target "chr17_30000001_40002000";	Start 2761159;	End 2761446 + 1
chr6_hla_hap2	tblastx	hsp	5560	5850	173.8	-	1	Target "chrUn_random_70000001_80002000";	Start 4769281;	End 4769571 - 1
chr6_hla_hap2	tblastx	hsp	5560	5856	207.7	-	1	Target "chr17_30000001_40002000";	Start 2827409;	End 2827705 + 2
chr6_hla_hap2	tblastx	hsp	5560	5856	210.0	-	1	Target "chr17_30000001_40002000";	Start 2807484;	End 2807780 + 3
chr6_hla_hap2	tblastx	hsp	5561	5698	53.3	-	3	Target "chr17_30000001_40002000";	Start 2571806;	End 2571943 - 3
chr6_hla_hap2	tblastx	hsp	5618	5698	46.0	+	2	Target "chr17_30000001_40002000";	Start 2571863;	End 2571943 + 2
chr6_hla_hap2	tblastx	hsp	5618	5758	76.7	+	2	Target "chr17_30000001_40002000";	Start 2761248;	End 2761388 - 2
chr6_hla_hap2	tblastx	hsp	5742	5834	47.8	+	3	Target "chr17_30000001_40002000";	Start 2827431;	End 2827523 - 2
chr6_hla_hap2	tblastx	hsp	5742	5834	58.3	+	3	Target "chr17_30000001_40002000";	Start 2807506;	End 2807598 - 1
chr6_hla_hap2	tblastx	hsp	5762	5854	56.5	+	2	Target "chr17_30000001_40002000";	Start 2807486;	End 2807578 - 3
chr6_hla_hap2	tblastx	hsp	5762	5857	57.0	+	2	Target "chr17_30000001_40002000";	Start 2827408;	End 2827503 - 1
chr6_hla_hap2	tblastx	hsp	6343	6405	40.5	-	1	Target "chr17_30000001_40002000";	Start 2761396;	End 2761458 + 1
chr6_hla_hap2	tblastx	hsp	6347	6409	40.0	+	2	Target "chr17_30000001_40002000";	Start 2827651;	End 2827713 - 1
chr6_hla_hap2	tblastx	hsp	6352	6405	39.6	-	1	Target "chr17_30000001_40002000";	Start 2571802;	End 2571855 - 1
chr6_hla_hap2	tblastx	hsp	6352	6405	40.0	-	1	Target "chr17_30000001_40002000";	Start 2807730;	End 2807783 + 3
chr6_hla_hap2	tblastx	hsp	6352	6405	41.8	-	1	Target "chr17_30000001_40002000";	Start 2827655;	End 2827708 + 2
chr6_hla_hap2	tblastx	hsp	8540	8866	127.5	+	2	Target "chr17_30000001_40002000";	Start 2802902;	End 2803228 - 3
chr6_hla_hap2	tblastx	hsp	8558	8836	96.4	+	2	Target "chr17_30000001_40002000";	Start 2884705;	End 2884983 + 1
chr6_hla_hap2	tblastx	hsp	8558	8863	101.4	+	2	Target "chr17_30000001_40002000";	Start 2758575;	End 2758880 - 2
chr6_hla_hap2	tblastx	hsp	8578	8709	63.4	-	1	Target "chr17_30000001_40002000";	Start 2803059;	End 2803190 + 3
chr6_hla_hap2	tblastx	hsp	8588	8842	109.7	-	3	Target "chr17_30000001_40002000";	Start 2884735;	End 2884989 - 1
chr6_hla_hap2	tblastx	hsp	8588	8872	144.5	-	3	Target "chr17_30000001_40002000";	Start 2802896;	End 2803180 + 2
chr6_hla_hap2	tblastx	hsp	8594	8863	138.1	-	3	Target "chr17_30000001_40002000";	Start 2758575;	End 2758844 + 3
chr6_hla_hap2	tblastx	hsp	8636	8866	131.7	-	3	Target "chr17_30000001_40002000";	Start 2826480;	End 2826710 + 3
chr6_hla_hap2	tblastx	hsp	8658	8744	46.0	+	3	Target "chr17_30000001_40002000";	Start 2826602;	End 2826688 - 3
chr6_hla_hap2	tblastx	hsp	18340	18525	55.6	+	1	Target "chr17_30000001_40002000";	Start 2891359;	End 2891544 + 1
chr6_hla_hap2	tblastx	hsp	51668	51754	51.0	-	3	Target "chr17_30000001_40002000";	Start 2808406;	End 2808492 + 1
chr6_hla_hap2	tblastx	hsp	51669	51788	70.3	+	3	Target "chr17_30000001_40002000";	Start 2808372;	End 2808491 - 2
chr6_hla_hap2	tblastx	hsp	51679	51777	57.9	-	1	Target "chr17_30000001_40002000";	Start 2808383;	End 2808481 + 2
chr6_hla_hap2	tblastx	hsp	51703	51807	71.6	+	1	Target "chr17_30000001_40002000";	Start 2808353;	End 2808457 - 3
chr6_hla_hap2	tblastx	hsp	51704	51808	53.8	+	2	Target "chr17_30000001_40002000";	Start 2808352;	End 2808456 - 1
chr6_hla_hap2	tblastx	hsp	52475	52624	59.7	+	2	Target "chr17_30000001_40002000";	Start 2761309;	End 2761458 - 1
chr6_hla_hap2	tblastx	hsp	52484	52624	55.6	+	2	Target "chr17_30000001_40002000";	Start 2571802;	End 2571942 + 1
chr6_hla_hap2	tblastx	hsp	52484	52738	99.1	+	2	Target "chrUn_random_70000001_80002000";	Start 4769278;	End 4769532 + 1
chr6_hla_hap2	tblastx	hsp	52484	52741	135.3	+	2	Target "chr17_30000001_40002000";	Start 2827451;	End 2827708 - 3
chr6_hla_hap2	tblastx	hsp	52484	52741	144.0	+	2	Target "chr17_30000001_40002000";	Start 2807526;	End 2807783 - 2
chr6_hla_hap2	tblastx	hsp	52487	52606	55.6	-	3	Target "chr17_30000001_40002000";	Start 2647312;	End 2647431 + 1
chr6_hla_hap2	tblastx	hsp	52487	52606	79.9	-	3	Target "chr17_30000001_40002000";	Start 2571805;	End 2571924 - 1
chr6_hla_hap2	tblastx	hsp	52487	52774	159.6	-	3	Target "chr17_30000001_40002000";	Start 2761159;	End 2761446 + 1
chr6_hla_hap2	tblastx	hsp	52487	52777	165.1	-	3	Target "chrUn_random_70000001_80002000";	Start 4769281;	End 4769571 - 1
chr6_hla_hap2	tblastx	hsp	52487	52786	205.4	-	3	Target "chr17_30000001_40002000";	Start 2807481;	End 2807780 + 3
chr6_hla_hap2	tblastx	hsp	52487	52789	197.2	-	3	Target "chr17_30000001_40002000";	Start 2827403;	End 2827705 + 2
chr6_hla_hap2	tblastx	hsp	52488	52625	54.2	-	2	Target "chr17_30000001_40002000";	Start 2571806;	End 2571943 - 3
chr6_hla_hap2	tblastx	hsp	52560	52685	64.8	+	3	Target "chr17_30000001_40002000";	Start 2761248;	End 2761373 - 2
chr6_hla_hap2	tblastx	hsp	52669	52761	42.8	+	1	Target "chr17_30000001_40002000";	Start 2827431;	End 2827523 - 2
chr6_hla_hap2	tblastx	hsp	52669	52761	53.3	+	1	Target "chr17_30000001_40002000";	Start 2807506;	End 2807598 - 1
chr6_hla_hap2	tblastx	hsp	52689	52781	58.3	+	3	Target "chr17_30000001_40002000";	Start 2807486;	End 2807578 - 3
chr6_hla_hap2	tblastx	hsp	52689	52826	59.3	+	3	Target "chr17_30000001_40002000";	Start 2827366;	End 2827503 - 1
chr6_hla_hap2	tblastx	hsp	82996	83181	147.2	+	1	Target "chr2_70000001_80002000";	Start 6541289;	End 6541474 - 3
chr6_hla_hap2	tblastx	hsp	83008	83184	84.0	+	1	Target "chr15_100000001_104138553";	Start 3000983;	End 3001159 + 2
chr6_hla_hap2	tblastx	hsp	83008	83058	42.3	-	1	Target "chr2_70000001_80002000";	Start 6541412;	End 6541462 + 2
chr6_hla_hap2	tblastx	hsp	83017	83253	109.7	+	1	Target "chr6_40000001_50002000";	Start 7417685;	End 7417921 - 3
chr6_hla_hap2	tblastx	hsp	83042	83140	75.8	-	3	Target "chr2_70000001_80002000";	Start 6541330;	End 6541428 + 1
chr6_hla_hap2	tblastx	hsp	83062	83196	96.4	-	1	Target "chr2_70000001_80002000";	Start 6541274;	End 6541408 + 2
chr6_hla_hap2	tblastx	hsp	83095	83202	47.3	+	1	Target "chr9_1_10002000";	Start 7666070;	End 7666177 - 3
chr6_hla_hap2	tblastx	hsp	83107	83202	47.3	-	1	Target "chr9_1_10002000";	Start 7666070;	End 7666165 + 2
chr6_hla_hap2	tblastx	hsp	83176	83259	60.6	-	1	Target "chr2_70000001_80002000";	Start 6537391;	End 6537474 + 1
chr6_hla_hap2	tblastx	hsp	83179	83256	59.7	+	1	Target "chr2_70000001_80002000";	Start 6537394;	End 6537471 - 1
chr6_hla_hap2	tblastx	hsp	83195	83263	50.6	-	3	Target "chr2_70000001_80002000";	Start 6537387;	End 6537455 + 3
chr6_hla_hap2	tblastx	hsp	83210	83317	52.8	-	3	Target "chr9_1_10002000";	Start 7665991;	End 7666098 + 1
chr6_hla_hap2	tblastx	hsp	83214	83264	40.0	+	3	Target "chr2_70000001_80002000";	Start 6537386;	End 6537436 - 3
chr6_hla_hap2	tblastx	hsp	83236	83334	44.6	+	1	Target "chr9_1_10002000";	Start 7665974;	End 7666072 - 3
chr6_hla_hap2	tblastx	hsp	83262	83336	42.3	-	2	Target "chr9_1_10002000";	Start 7665972;	End 7666046 + 3
chr6_hla_hap2	tblastx	hsp	83262	83342	63.8	-	2	Target "chr2_70000001_80002000";	Start 6534405;	End 6534485 + 3
chr6_hla_hap2	tblastx	hsp	83263	83340	62.5	+	1	Target "chr2_70000001_80002000";	Start 6534407;	End 6534484 - 3
chr6_hla_hap2	tblastx	hsp	83332	83460	70.7	+	1	Target "chr15_100000001_104138553";	Start 3003835;	End 3003963 + 1
chr6_hla_hap2	tblastx	hsp	83335	83460	108.7	+	1	Target "chr2_70000001_80002000";	Start 6533364;	End 6533489 - 2
chr6_hla_hap2	tblastx	hsp	83338	83529	83.1	+	1	Target "chr7_110000001_120002000";	Start 4626396;	End 4626587 + 3
chr6_hla_hap2	tblastx	hsp	83338	83529	95.9	+	1	Target "chr6_40000001_50002000";	Start 7417374;	End 7417565 - 2
chr6_hla_hap2	tblastx	hsp	83350	83436	53.8	-	1	Target "chr2_70000001_80002000";	Start 6533388;	End 6533474 + 3
chr6_hla_hap2	tblastx	hsp	83446	83559	78.5	+	1	Target "chr2_70000001_80002000";	Start 6530955;	End 6531068 - 2
chr6_hla_hap2	tblastx	hsp	83457	83552	79.9	-	2	Target "chr2_70000001_80002000";	Start 6530962;	End 6531057 + 1
chr6_hla_hap2	tblastx	hsp	83473	83694	115.2	+	1	Target "chr9_1_10002000";	Start 7665589;	End 7665810 - 1
chr6_hla_hap2	tblastx	hsp	83473	83550	50.1	-	1	Target "chr9_1_10002000";	Start 7665733;	End 7665810 + 1
chr6_hla_hap2	tblastx	hsp	83484	83660	83.1	-	2	Target "chr9_1_10002000";	Start 7665623;	End 7665799 + 2
chr6_hla_hap2	tblastx	hsp	83553	83663	83.1	-	2	Target "chr2_70000001_80002000";	Start 6527764;	End 6527874 + 1
chr6_hla_hap2	tblastx	hsp	83554	83739	137.2	+	1	Target "chr2_70000001_80002000";	Start 6527688;	End 6527873 - 2
chr6_hla_hap2	tblastx	hsp	83629	83727	54.7	-	1	Target "chr2_70000001_80002000";	Start 6527700;	End 6527798 + 3
chr6_hla_hap2	tblastx	hsp	83667	83735	48.3	-	2	Target "chr2_70000001_80002000";	Start 6527692;	End 6527760 + 1
chr6_hla_hap2	tblastx	hsp	83674	83883	97.7	+	1	Target "chr6_40000001_50002000";	Start 7416960;	End 7417169 - 2
chr6_hla_hap2	tblastx	hsp	83728	83883	124.8	+	1	Target "chr2_70000001_80002000";	Start 6524580;	End 6524735 - 2
chr6_hla_hap2	tblastx	hsp	83728	83883	69.8	+	1	Target "chr15_100000001_104138553";	Start 3005047;	End 3005202 + 1
chr6_hla_hap2	tblastx	hsp	83795	83950	80.3	-	3	Target "chr2_70000001_80002000";	Start 6524513;	End 6524668 + 2
chr6_hla_hap2	tblastx	hsp	83841	83912	49.2	+	3	Target "chr2_70000001_80002000";	Start 6524551;	End 6524622 - 1
chr6_hla_hap2	tblastx	hsp	84041	84109	51.5	+	2	Target "chr2_70000001_80002000";	Start 6524355;	End 6524423 - 2
chr6_hla_hap2	tblastx	hsp	84049	84150	56.5	+	1	Target "chr2_70000001_80002000";	Start 6524314;	End 6524415 - 1
chr6_hla_hap2	tblastx	hsp	84052	84153	50.1	+	1	Target "chr9_1_10002000";	Start 7665176;	End 7665277 - 3
chr6_hla_hap2	tblastx	hsp	85358	85456	65.2	+	2	Target "chr6_80000001_90002000";	Start 6701897;	End 6701995 - 3
chr6_hla_hap2	tblastx	hsp	85358	85504	86.3	+	2	Target "chr8_1_10002000";	Start 4628438;	End 4628584 - 3
chr6_hla_hap2	tblastx	hsp	85358	85504	95.0	+	2	Target "chr15_30000001_40002000";	Start 1325567;	End 1325713 - 3
chr6_hla_hap2	tblastx	hsp	85373	85504	83.5	+	2	Target "chr1_125000001_135002000";	Start 5059363;	End 5059494 - 1
chr6_hla_hap2	tblastx	hsp	85396	85458	45.5	-	1	Target "chr6_80000001_90002000";	Start 6701895;	End 6701957 + 3
chr6_hla_hap2	tblastx	hsp	85396	85494	66.1	-	1	Target "chr1_125000001_135002000";	Start 5059373;	End 5059471 + 2
chr6_hla_hap2	tblastx	hsp	85396	85587	128.0	-	1	Target "chr8_1_10002000";	Start 4628355;	End 4628546 + 3
chr6_hla_hap2	tblastx	hsp	85396	85587	130.3	-	1	Target "chr15_30000001_40002000";	Start 1325484;	End 1325675 + 3
chr6_hla_hap2	tblastx	hsp	85411	85530	72.1	+	1	Target "chr15_30000001_40002000";	Start 1325541;	End 1325660 - 2
chr6_hla_hap2	tblastx	hsp	85452	85514	40.0	+	3	Target "chr8_1_10002000";	Start 4628428;	End 4628490 - 1
chr6_hla_hap2	tblastx	hsp	85452	85514	48.3	+	3	Target "chr1_125000001_135002000";	Start 5059353;	End 5059415 - 2
chr6_hla_hap2	tblastx	hsp	85459	85584	84.5	-	1	Target "chr6_80000001_90002000";	Start 6701770;	End 6701895 + 1
chr6_hla_hap2	tblastx	hsp	85498	85587	58.3	-	1	Target "chr1_125000001_135002000";	Start 5059280;	End 5059369 + 2
chr6_hla_hap2	tblastx	hsp	85508	85588	43.2	+	2	Target "chr1_125000001_135002000";	Start 5059279;	End 5059359 - 1
chr6_hla_hap2	tblastx	hsp	85508	85588	52.8	+	2	Target "chr15_30000001_40002000";	Start 1325483;	End 1325563 - 3
chr6_hla_hap2	tblastx	hsp	85508	85588	53.8	+	2	Target "chr8_1_10002000";	Start 4628354;	End 4628434 - 3
chr6_hla_hap2	tblastx	hsp	85524	85583	49.6	+	3	Target "chr6_80000001_90002000";	Start 6701771;	End 6701830 - 3
chr6_hla_hap2	tblastx	hsp	85524	85589	54.7	+	3	Target "chr8_1_10002000";	Start 4628353;	End 4628418 - 1
chr6_hla_hap2	tblastx	hsp	85530	85589	47.8	+	3	Target "chr1_125000001_135002000";	Start 5059278;	End 5059337 - 2
chr6_hla_hap2	tblastx	hsp	85585	85659	41.8	+	1	Target "chr1_125000001_135002000";	Start 5059199;	End 5059273 - 3
chr6_hla_hap2	tblastx	hsp	85587	85745	87.7	-	2	Target "chr8_1_10002000";	Start 4628188;	End 4628346 + 1
chr6_hla_hap2	tblastx	hsp	85616	85807	95.9	+	2	Target "chr8_1_10002000";	Start 4628126;	End 4628317 - 3
chr6_hla_hap2	tblastx	hsp	85618	85695	51.9	-	1	Target "chr15_30000001_40002000";	Start 1325367;	End 1325444 + 3
chr6_hla_hap2	tblastx	hsp	85619	85807	92.3	+	2	Target "chr15_30000001_40002000";	Start 1325255;	End 1325443 - 3
chr6_hla_hap2	tblastx	hsp	85620	85745	59.7	-	2	Target "chr15_30000001_40002000";	Start 1325317;	End 1325442 + 1
chr6_hla_hap2	tblastx	hsp	85673	85807	54.7	+	2	Target "chr1_125000001_135002000";	Start 5059059;	End 5059193 - 2
chr6_hla_hap2	tblastx	hsp	85685	85762	43.7	-	3	Target "chr8_1_10002000";	Start 4628171;	End 4628248 + 2
chr6_hla_hap2	tblastx	hsp	85699	85806	53.8	-	1	Target "chr1_125000001_135002000";	Start 5059060;	End 5059167 + 1
chr6_hla_hap2	tblastx	hsp	85699	85806	57.4	-	1	Target "chr8_1_10002000";	Start 4628127;	End 4628234 + 3
chr6_hla_hap2	tblastx	hsp	85702	85836	58.3	-	1	Target "chr15_30000001_40002000";	Start 1325226;	End 1325360 + 3
chr6_hla_hap2	tblastx	hsp	88887	89027	78.5	+	3	Target "chr17_30000001_40002000";	Start 2808372;	End 2808512 - 2
chr6_hla_hap2	tblastx	hsp	88889	88993	57.4	-	3	Target "chr17_30000001_40002000";	Start 2808406;	End 2808510 + 1
chr6_hla_hap2	tblastx	hsp	88921	89016	63.4	-	1	Target "chr17_30000001_40002000";	Start 2808383;	End 2808478 + 2
chr6_hla_hap2	tblastx	hsp	88939	89046	73.0	+	1	Target "chr17_30000001_40002000";	Start 2808353;	End 2808460 - 3
chr6_hla_hap2	tblastx	hsp	88943	89047	57.0	+	2	Target "chr17_30000001_40002000";	Start 2808352;	End 2808456 - 1
chr6_hla_hap2	tblastx	hsp	89742	89846	58.3	-	2	Target "chr17_30000001_40002000";	Start 2827591;	End 2827695 + 1
chr6_hla_hap2	tblastx	hsp	89745	89852	55.6	-	2	Target "chr17_30000001_40002000";	Start 2761326;	End 2761433 + 3
chr6_hla_hap2	tblastx	hsp	89745	89915	90.4	-	2	Target "chr17_30000001_40002000";	Start 2807597;	End 2807767 + 2
chr6_hla_hap2	tblastx	hsp	89747	89980	112.4	+	2	Target "chr17_30000001_40002000";	Start 2807532;	End 2807765 - 2
chr6_hla_hap2	tblastx	hsp	89747	89980	112.9	+	2	Target "chr17_30000001_40002000";	Start 2827457;	End 2827690 - 3
chr6_hla_hap2	tblastx	hsp	89753	89869	40.5	+	2	Target "chr17_30000001_40002000";	Start 2761309;	End 2761425 - 1
chr6_hla_hap2	tblastx	hsp	89753	89869	43.2	+	2	Target "chr17_30000001_40002000";	Start 2571826;	End 2571942 + 1
chr6_hla_hap2	tblastx	hsp	89753	89851	59.3	-	3	Target "chr17_30000001_40002000";	Start 2571826;	End 2571924 - 1
chr6_hla_hap2	tblastx	hsp	89753	89989	136.7	-	3	Target "chr17_30000001_40002000";	Start 2761189;	End 2761425 + 1
chr6_hla_hap2	tblastx	hsp	89753	90001	171.5	-	3	Target "chr17_30000001_40002000";	Start 2827436;	End 2827684 + 2
chr6_hla_hap2	tblastx	hsp	89756	90001	146.8	-	3	Target "chrUn_random_70000001_80002000";	Start 4769305;	End 4769550 - 1
chr6_hla_hap2	tblastx	hsp	89759	90001	178.4	-	3	Target "chr17_30000001_40002000";	Start 2807511;	End 2807753 + 3
chr6_hla_hap2	tblastx	hsp	89768	89851	43.2	-	3	Target "chr17_30000001_40002000";	Start 2647312;	End 2647395 + 1
chr6_hla_hap2	tblastx	hsp	89805	89870	40.5	+	3	Target "chr17_30000001_40002000";	Start 2571878;	End 2571943 + 2
chr6_hla_hap2	tblastx	hsp	89805	89930	64.3	+	3	Target "chr17_30000001_40002000";	Start 2761248;	End 2761373 - 2
chr6_hla_hap2	tblastx	hsp	89805	89930	71.2	+	3	Target "chrUn_random_70000001_80002000";	Start 4769354;	End 4769479 + 2
chr6_hla_hap2	tblastx	hsp	89934	90020	53.3	+	3	Target "chr17_30000001_40002000";	Start 2827417;	End 2827503 - 1
chr6_hla_hap2	tblastx	hsp	89934	90026	57.0	+	3	Target "chr17_30000001_40002000";	Start 2807486;	End 2807578 - 3
chr6_hla_hap2	tblastx	hsp	89934	90059	46.0	+	3	Target "chrUn_random_70000001_80002000";	Start 4769483;	End 4769608 + 2
chr6_hla_hap2	tblastx	hsp	91264	91356	70.3	+	1	Target "chr13_40000001_50002000";	Start 6164383;	End 6164475 + 1
chr6_hla_hap2	tblastx	hsp	91264	91356	53.8	-	1	Target "chr13_40000001_50002000";	Start 6164383;	End 6164475 - 1
chr6_hla_hap2	tblastx	hsp	91437	91568	55.1	+	3	Target "chr13_40000001_50002000";	Start 6164635;	End 6164766 + 1
chr6_hla_hap2	tblastx	hsp	91574	91687	81.7	+	2	Target "chr13_40000001_50002000";	Start 6165725;	End 6165838 + 2
chr6_hla_hap2	tblastx	hsp	91575	91688	81.7	+	3	Target "chr13_40000001_50002000";	Start 6165726;	End 6165839 + 3
chr6_hla_hap2	tblastx	hsp	91587	91658	62.9	-	2	Target "chr13_40000001_50002000";	Start 6165738;	End 6165809 - 2
chr6_hla_hap2	tblastx	hsp	91686	91820	94.5	+	3	Target "chr13_40000001_50002000";	Start 6168053;	End 6168187 + 2
chr6_hla_hap2	tblastx	hsp	91809	91859	41.4	-	2	Target "chr13_40000001_50002000";	Start 6168759;	End 6168809 - 2
chr6_hla_hap2	tblastx	hsp	91811	91861	39.6	+	2	Target "chr13_40000001_50002000";	Start 6168761;	End 6168811 + 2
chr6_hla_hap2	tblastx	hsp	91811	91909	70.7	-	3	Target "chr13_40000001_50002000";	Start 6168761;	End 6168859 - 3
chr6_hla_hap2	tblastx	hsp	91812	91868	50.1	+	3	Target "chr13_40000001_50002000";	Start 6168762;	End 6168818 + 3
chr6_hla_hap2	tblastx	hsp	91872	91952	52.8	+	3	Target "chr13_40000001_50002000";	Start 6168822;	End 6168902 + 3
chr6_hla_hap2	tblastx	hsp	91988	92086	77.6	-	3	Target "chr13_40000001_50002000";	Start 6170067;	End 6170165 - 2
chr6_hla_hap2	tblastx	hsp	91989	92045	46.4	+	3	Target "chr13_40000001_50002000";	Start 6170068;	End 6170124 + 1
chr6_hla_hap2	tblastx	hsp	92030	92083	40.9	+	2	Target "chr13_40000001_50002000";	Start 6170109;	End 6170162 + 3
chr6_hla_hap2	tblastx	hsp	92038	92091	46.0	-	1	Target "chr13_40000001_50002000";	Start 6170117;	End 6170170 - 3
chr6_hla_hap2	tblastx	hsp	92041	92169	67.0	+	1	Target "chr13_40000001_50002000";	Start 6170120;	End 6170248 + 2
chr6_hla_hap2	tblastx	hsp	96155	96217	41.4	-	3	Target "chr17_30000001_40002000";	Start 2761396;	End 2761458 + 1
chr6_hla_hap2	tblastx	hsp	96164	96217	40.9	-	3	Target "chr17_30000001_40002000";	Start 2571802;	End 2571855 - 1
chr6_hla_hap2	tblastx	hsp	96164	96217	41.4	-	3	Target "chr17_30000001_40002000";	Start 2827655;	End 2827708 + 2
chr6_hla_hap2	tblastx	hsp	96164	96259	40.9	-	3	Target "chr17_30000001_40002000";	Start 2807688;	End 2807783 + 3
chr6_hla_hap2	tblastx	hsp	98093	98257	52.4	+	2	Target "chr17_30000001_40002000";	Start 2758710;	End 2758874 - 2
chr6_hla_hap2	tblastx	hsp	98105	98257	70.7	+	2	Target "chr17_30000001_40002000";	Start 2803040;	End 2803192 - 3
chr6_hla_hap2	tblastx	hsp	98107	98205	48.7	-	1	Target "chr17_30000001_40002000";	Start 2803092;	End 2803190 + 3
chr6_hla_hap2	tblastx	hsp	98124	98216	48.7	-	2	Target "chr17_30000001_40002000";	Start 2758751;	End 2758843 + 2
chr6_hla_hap2	tblastx	hsp	98128	98271	83.5	+	1	Target "chr17_30000001_40002000";	Start 2803026;	End 2803169 - 2
chr6_hla_hap2	tblastx	hsp	98131	98271	84.0	+	1	Target "chr17_30000001_40002000";	Start 2758696;	End 2758836 - 1
chr6_hla_hap2	tblastx	hsp	98161	98271	57.0	+	1	Target "chr17_30000001_40002000";	Start 2826604;	End 2826714 - 1
chr6_hla_hap2	tblastx	hsp	98163	98297	82.6	+	3	Target "chr17_30000001_40002000";	Start 2803000;	End 2803134 - 1
chr6_hla_hap2	tblastx	hsp	98165	98308	48.7	-	3	Target "chr17_30000001_40002000";	Start 2884783;	End 2884926 - 1
chr6_hla_hap2	tblastx	hsp	98165	98308	81.3	-	3	Target "chr17_30000001_40002000";	Start 2826567;	End 2826710 + 3
chr6_hla_hap2	tblastx	hsp	98165	98308	96.8	-	3	Target "chr17_30000001_40002000";	Start 2758659;	End 2758802 + 3
chr6_hla_hap2	tblastx	hsp	98165	98308	97.3	-	3	Target "chr17_30000001_40002000";	Start 2802989;	End 2803132 + 2
chr6_hla_hap2	tblastx	hsp	98169	98288	48.3	+	3	Target "chr17_30000001_40002000";	Start 2884787;	End 2884906 + 2
chr6_hla_hap2	tblastx	hsp	98187	98297	68.9	+	3	Target "chr17_30000001_40002000";	Start 2826578;	End 2826688 - 3
chr6_hla_hap2	tblastx	hsp	98318	98389	47.8	-	3	Target "chr17_30000001_40002000";	Start 2826480;	End 2826551 + 3
chr6_hla_hap2	tblastx	hsp	98318	98395	46.0	-	3	Target "chr17_30000001_40002000";	Start 2802896;	End 2802973 + 2
chr6_hla_hap2	tblastx	hsp	98321	98389	40.9	+	2	Target "chr17_30000001_40002000";	Start 2802902;	End 2802970 - 3
chr6_hla_hap2	tblastx	hsp	107130	107306	46.0	-	2	Target "chr17_30000001_40002000";	Start 2799266;	End 2799442 + 2
chr6_hla_hap2	tblastx	hsp	107187	107315	49.6	-	2	Target "chr17_30000001_40002000";	Start 2819033;	End 2819161 + 2
chr6_hla_hap2	tblastx	hsp	107188	107316	41.8	+	1	Target "chr17_30000001_40002000";	Start 2819032;	End 2819160 - 1
chr6_hla_hap2	tblastx	hsp	133059	133187	52.4	+	3	Target "chr17_30000001_40002000";	Start 2761752;	End 2761880 - 2
chr6_hla_hap2	tblastx	hsp	133067	133153	57.9	-	3	Target "chr17_30000001_40002000";	Start 2808406;	End 2808492 + 1
chr6_hla_hap2	tblastx	hsp	133068	133187	77.6	+	3	Target "chr17_30000001_40002000";	Start 2808372;	End 2808491 - 2
chr6_hla_hap2	tblastx	hsp	133078	133176	65.7	-	1	Target "chr17_30000001_40002000";	Start 2808383;	End 2808481 + 2
chr6_hla_hap2	tblastx	hsp	133099	133206	74.8	+	1	Target "chr17_30000001_40002000";	Start 2808353;	End 2808460 - 3
chr6_hla_hap2	tblastx	hsp	133103	133207	58.3	+	2	Target "chr17_30000001_40002000";	Start 2808352;	End 2808456 - 1
chr6_hla_hap2	tblastx	hsp	133849	134172	175.2	-	1	Target "chr17_30000001_40002000";	Start 2761159;	End 2761482 + 1
chr6_hla_hap2	tblastx	hsp	133873	134022	64.3	+	1	Target "chr17_30000001_40002000";	Start 2761309;	End 2761458 - 1
chr6_hla_hap2	tblastx	hsp	133877	133939	46.9	+	2	Target "chr17_30000001_40002000";	Start 2827651;	End 2827713 - 1
chr6_hla_hap2	tblastx	hsp	133882	134022	61.6	+	1	Target "chr17_30000001_40002000";	Start 2571802;	End 2571942 + 1
chr6_hla_hap2	tblastx	hsp	133882	134160	168.8	+	1	Target "chr17_30000001_40002000";	Start 2827430;	End 2827708 - 3
chr6_hla_hap2	tblastx	hsp	133882	134160	98.2	+	1	Target "chrUn_random_70000001_80002000";	Start 4769278;	End 4769556 + 1
chr6_hla_hap2	tblastx	hsp	133882	134169	147.2	+	1	Target "chr17_30000001_40002000";	Start 2807496;	End 2807783 - 2
chr6_hla_hap2	tblastx	hsp	133882	134004	57.0	-	1	Target "chr17_30000001_40002000";	Start 2647312;	End 2647434 + 1
chr6_hla_hap2	tblastx	hsp	133882	134004	82.6	-	1	Target "chr17_30000001_40002000";	Start 2571802;	End 2571924 - 1
chr6_hla_hap2	tblastx	hsp	133882	134172	214.6	-	1	Target "chr17_30000001_40002000";	Start 2827418;	End 2827708 + 2
chr6_hla_hap2	tblastx	hsp	133882	134172	216.9	-	1	Target "chr17_30000001_40002000";	Start 2807493;	End 2807783 + 3
chr6_hla_hap2	tblastx	hsp	133882	134175	176.1	-	1	Target "chrUn_random_70000001_80002000";	Start 4769278;	End 4769571 - 1
chr6_hla_hap2	tblastx	hsp	133886	134023	62.5	-	3	Target "chr17_30000001_40002000";	Start 2571806;	End 2571943 - 3
chr6_hla_hap2	tblastx	hsp	133888	134169	73.5	-	1	Target "chr17_30000001_40002000";	Start 2836842;	End 2837123 - 2
chr6_hla_hap2	tblastx	hsp	133943	134023	46.0	+	2	Target "chr17_30000001_40002000";	Start 2571863;	End 2571943 + 2
chr6_hla_hap2	tblastx	hsp	133943	134083	76.7	+	2	Target "chr17_30000001_40002000";	Start 2761248;	End 2761388 - 2
chr6_hla_hap2	tblastx	hsp	134087	134164	44.1	+	2	Target "chrUn_random_70000001_80002000";	Start 4769483;	End 4769560 + 2
chr6_hla_hap2	tblastx	hsp	134087	134164	53.8	+	2	Target "chr17_30000001_40002000";	Start 2827426;	End 2827503 - 1
chr6_hla_hap2	tblastx	hsp	134677	134730	40.9	-	1	Target "chr17_30000001_40002000";	Start 2807730;	End 2807783 + 3
chr6_hla_hap2	tblastx	hsp	134677	134730	42.8	-	1	Target "chr17_30000001_40002000";	Start 2827655;	End 2827708 + 2
chr6_hla_hap2	tblastx	hsp	137584	137910	112.9	+	1	Target "chr17_30000001_40002000";	Start 2802902;	End 2803228 - 3
chr6_hla_hap2	tblastx	hsp	137601	137735	52.4	-	2	Target "chr17_30000001_40002000";	Start 2758747;	End 2758881 + 1
chr6_hla_hap2	tblastx	hsp	137602	137880	83.5	+	1	Target "chr17_30000001_40002000";	Start 2884705;	End 2884983 + 1
chr6_hla_hap2	tblastx	hsp	137608	137916	179.8	-	1	Target "chr17_30000001_40002000";	Start 2802896;	End 2803204 + 2
chr6_hla_hap2	tblastx	hsp	137614	137886	110.6	-	1	Target "chr17_30000001_40002000";	Start 2884717;	End 2884989 - 1
chr6_hla_hap2	tblastx	hsp	137626	137889	145.9	-	1	Target "chr17_30000001_40002000";	Start 2758593;	End 2758856 + 3
chr6_hla_hap2	tblastx	hsp	137678	137788	65.7	+	2	Target "chr17_30000001_40002000";	Start 2758694;	End 2758804 - 3
chr6_hla_hap2	tblastx	hsp	137680	137910	115.6	-	1	Target "chr17_30000001_40002000";	Start 2826480;	End 2826710 + 3
chr6_hla_hap2	tblastx	hsp	137702	137809	57.9	+	2	Target "chr17_30000001_40002000";	Start 2826581;	End 2826688 - 3
chr6_hla_hap2	tblastx	hsp	146093	146287	46.0	+	2	Target "chr17_30000001_40002000";	Start 2799239;	End 2799433 - 3
chr6_hla_hap2	tblastx	hsp	146099	146233	50.1	-	3	Target "chr17_30000001_40002000";	Start 2799293;	End 2799427 + 2
chr6_hla_hap2	tblastx	hsp	146141	146269	54.7	-	3	Target "chr17_30000001_40002000";	Start 2819033;	End 2819161 + 2
chr6_hla_hap2	tblastx	hsp	146142	146270	47.3	+	3	Target "chr17_30000001_40002000";	Start 2819032;	End 2819160 - 1