## date Fri May 30 21:51:13 2003 ## source-version: geneid v 1.1 -- geneid@imim.es # Sequence chr7_random - Length = 1057565 bps # Optimal Gene Structure. 6 genes. Score = 675.697659 # Gene 1 (Reverse). 2 exons. 370 aa. Score = 266.106100 Internal 673845 674928 268.71 - 2 2 5.38 7.65 87.74 140.71 AA 9:370 gene_1 First 693654 693678 -2.61 - 0 1 3.96 -0.13 1.29 1.33 AA 1: 9 gene_1 >chr7_random|SGP_v1.0_predicted_cDNA_1|1109_NN ATGATAACCATGGGTATTATTCATGGTATGGCCTCACATGTGCAAGTTTTCTCCCCTCAC ACCCTTCAATCAAGTGCCTTCTGTAGTGTGAAGAAACTGAAAATAGAGCCGAGTTCCAAC TGGGACATGACTGGGTACGGCTCCCACAGCAAAGTGTATAGCCAGAGCAAGAACATCCCC CTGTCGCAGCCAGCCACCACAACCGTCAGCACCTCCTTGCCGGTCCCAAACCCAAGCCTA CCTTACGAGCAGACCATCGTCTTCCCAGGAAGCACCGGGCACATCGTGGTCACCTCAGCA AGCAGCACTTCTGTCACCGGGCAAGTCCTCGGCGGACCACACAACCTAATGCGTCGAAGC ACTGTGAGCCTCCTTGATACCTACCAAAAATGTGGACTCAAGCGTAAGAGCGAGGAGATC GAGAACACAAGCAGCGTGCAGATCATCGAGGAGCATCCACCCATGATTCAGAATAATGCA AGCGGGGCCACTGTCGCCACTGCCACCACGTCTACTGCCACCTCCAAAAACAGCGGCTCC AACAGCGAGGGCGACTATCAGCTGGTGCAGCATGAGGTGCTGTGCTCCATGACCAACACC TACGAGGTCTTAGAGTTCTTGGGCCGAGGGACGTTTGGGCAAGTGGTCAAGTGCTGGAAA CGGGGCACCAATGAGATCGTAGCCATCAAGATCCTGAAGAACCACCCATCCTATGCCCGA CAAGGTCAGATTGAAGTGAGCATCCTGGCCCGGTTGAGCACGGAGAGTGCCGATGACTAT AACTTCGTCCGGGCCTACGAATGCTTCCAGCACAAGAACCACACGTGCTTGGTCTTCGAG ATGTTGGAGCAGAACCTCTATGACTTTCTGAAGCAAAACAAGTTTAGCCCCTTGCCCCTC AAATACATTCGCCCAGTTCTCCAGCAGGTAGCCACAGCCCTGATGAAACTCAAAAGCCTA GGTCTTATCCACGCTGACCTCAAACCAGAAAACATCATGCTGGTGGATCCATCTAGACAA CCATACAGAGTCAAGGTCATCGACTTTGGTTCAGCCAGCCACGTGTCCAAGGCTGTGTGC TCCACCTACTTGCAGTCCAGATATTACAG >chr7_random|SGP_v1.0_predicted_protein_1|370_AA MITMGIIHGMASHVQVFSPHTLQSSAFCSVKKLKIEPSSNWDMTGYGSHSKVYSQSKNIP LSQPATTTVSTSLPVPNPSLPYEQTIVFPGSTGHIVVTSASSTSVTGQVLGGPHNLMRRS TVSLLDTYQKCGLKRKSEEIENTSSVQIIEEHPPMIQNNASGATVATATTSTATSKNSGS NSEGDYQLVQHEVLCSMTNTYEVLEFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYAR QGQIEVSILARLSTESADDYNFVRAYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPL KYIRPVLQQVATALMKLKSLGLIHADLKPENIMLVDPSRQPYRVKVIDFGSASHVSKAVC STYLQSRYYag # Gene 2 (Reverse). 1 exons. 40 aa. Score = 2.106189 Single 943457 943576 2.11 - 0 0 0.00 -2.78 3.51 14.01 AA 1: 40 gene_2 >chr7_random|SGP_v1.0_predicted_cDNA_2|120_NN ATGACAACTACATCTTGTAAATTATACCCAATACTGCCGGCAGTCTATCCCTCTAAAGAA TATTTGCCCCTTTCATCCCTTCCTAACAATCAGATAATAAAATACAGCACCTATAAATAA >chr7_random|SGP_v1.0_predicted_protein_2|40_AA MTTTSCKLYPILPAVYPSKEYLPLSSLPNNQIIKYSTYK* # Gene 3 (Forward). 10 exons. 286 aa. Score = 139.499295 First 957705 957787 -3.76 + 0 2 1.05 -3.85 3.38 8.86 AA 1: 28 gene_3 Internal 957867 957976 -1.58 + 1 1 1.82 1.42 3.95 2.12 AA 28: 65 gene_3 Internal 966337 966464 27.96 + 2 0 3.30 3.70 12.64 11.53 AA 65:107 gene_3 Internal 967215 967281 18.10 + 0 1 4.80 3.99 8.43 4.71 AA 108:130 gene_3 Internal 968251 968330 -0.24 + 2 0 -1.74 1.16 7.10 4.40 AA 130:156 gene_3 Internal 970921 971037 40.49 + 0 0 6.00 3.15 19.88 10.88 AA 157:195 gene_3 Internal 973789 973845 15.81 + 0 0 4.96 3.87 7.47 3.70 AA 196:214 gene_3 Internal 974825 974905 21.32 + 0 0 4.42 4.05 10.84 7.14 AA 215:241 gene_3 Internal 975697 975761 9.85 + 0 2 2.34 1.66 10.10 3.44 AA 242:263 gene_3 Terminal 976007 976076 11.55 + 1 0 2.96 0.00 8.77 6.55 AA 263:286 gene_3 >chr7_random|SGP_v1.0_predicted_cDNA_3|858_NN ATGCCAGATGAGCTGCTTCTCAGCCACCACGTGGGATCGATTTCTTCCACATTGAACTTG GTCAAGGCCCGCTGCTTTGTGCTTACGGATAGACACAATGACCTGGCCAACATAAACCCT GGCTGTCACACCCTGGGGCTTTCCAACGGCACCCCGAATACTTGCCTGGTGCCTAGACCA CAGACAGCACGAGGACGCTGTGCAGAGCTGCAAGTCCGTATCACTGAGGCTGTGGCCACA GCCACTGAGCAGAGAGAGCTGATCGCCCGCCTGGAGCAGGACCTGAGCATCATTCAGTCC ATCCAGCGGCCCGATGCCGAGGGTGCCGCTGAGCACCGCCTGGAGAAGATCCCAGAGCCC ATCAAAGAGGCCACTGCCCTATTCTACGAGGGCCAGGTGGATTCACTGCTTTCCATCATC TCCAGCCAGAGGGAGCGCTTCCGTGCCCGGAACCAGGAGCTTGAGGCCGAGAACCGCCTG GCCCAGCACACCCTCCAGGCCCTGCAGAGTGAGCTGGACAGCCTGCGCGCCGACAACATC AAGCTCTTTGAGAAGATCAAGTTCCTGCAGAGCTACCCTGGCCGGGAGCGGCAGAAGAAG TACCTGAGCTTGAGTCCCTGGGACAAGGCCACCCTCAGCATGGGGCGTCTGGTTCTCTCC AACAAGATGGCGCGCACCATCGGCTTCTTCTACACACTGTTCCTGCACTGCCTGGTCTTC CTGGTGCTCTACAAGCTGGCATGGAGCGAGAGCATGGAGAGGGACTGTGCCACCTTCTGC GCCAAGAAGTTCGCTGACCACCTGCACAAGTTCCACGAGAATGACAACGGGGCTGCGGCT GGTGACTTGTGGCAGTGA >chr7_random|SGP_v1.0_predicted_protein_3|286_AA MPDELLLSHHVGSISSTLNLVKARCFVLTDRHNDLANINPGCHTLGLSNGTPNTCLVPRP QTARGRCAELQVRITEAVATATEQRELIARLEQDLSIIQSIQRPDAEGAAEHRLEKIPEP IKEATALFYEGQVDSLLSIISSQRERFRARNQELEAENRLAQHTLQALQSELDSLRADNI KLFEKIKFLQSYPGRERQKKYLSLSPWDKATLSMGRLVLSNKMARTIGFFYTLFLHCLVF LVLYKLAWSESMERDCATFCAKKFADHLHKFHENDNGAAAGDLWQ* # Gene 4 (Forward). 12 exons. 555 aa. Score = 230.550655 First 978716 978763 -6.22 + 0 0 3.33 2.26 1.90 -4.80 AA 1: 16 gene_4 Internal 993595 993762 37.06 + 0 0 -3.01 -0.35 24.39 20.22 AA 17: 72 gene_4 Internal 993903 994247 35.78 + 0 0 -3.43 2.89 41.86 -7.28 AA 73:187 gene_4 Internal 999685 999786 30.91 + 0 0 4.63 4.53 13.29 10.32 AA 188:221 gene_4 Internal 1001779 1001870 26.48 + 0 2 4.36 3.78 11.31 10.14 AA 222:252 gene_4 Internal 1007298 1007389 16.15 + 1 1 4.41 3.16 5.66 8.44 AA 252:283 gene_4 Internal 1007498 1007644 6.88 + 2 1 2.14 -0.43 6.20 9.29 AA 283:332 gene_4 Internal 1010153 1010367 36.57 + 2 0 2.58 -1.96 19.49 22.41 AA 332:403 gene_4 Internal 1013297 1013468 32.81 + 0 1 2.12 5.38 11.43 19.27 AA 404:461 gene_4 Internal 1030298 1030356 1.42 + 2 0 0.57 0.56 5.23 5.03 AA 461:480 gene_4 Internal 1030552 1030664 9.51 + 0 2 2.66 0.86 5.34 9.37 AA 481:518 gene_4 Terminal 1031933 1032044 3.20 + 1 0 3.27 0.00 4.63 4.40 AA 518:555 gene_4 >chr7_random|SGP_v1.0_predicted_cDNA_4|1665_NN ATGGAGGCAGCTCCGGCTGGCAAGGAGACCAGGACAGAACTGCCAGAGTTTTGCGAGCTG CATGCGCAGGCGGCCGCCGTGGACTTTGCGCACAAGTTCTGCCGTTTCCTGCGGGACAAC CCAGCTTACGACACGCCCGACGCCGGCGCCTCCTTCTCCCGCCACTTCGCCGCCAACTTC CTGGACGTCTTCGGCGAGGAGGTGCGCCGCGTGCTGGCCCGCGTTCGCAAGGGCTTCTCG CTGCGCAACATGAGCCTGTGCGTGGTGGACGGCGTGCGCGACATGTGGCACCGGCGCGCC TCGCCCGAGCCCGACGCGGCAGCTGCCCCGCGCACCGCCGAGCCCCGCGACAAGTGGACG CGGCGCCTGAGGCTGTCGCGGACGCTGGCTGCCAAGGTGGAGCTGGTGGACATTCAACGC GAGGGGGCGCTGCGCTTCATGGTGGCCGACGACGCGGCCGCGGGCTCCGGGGGCTCGGCT CAGTGGCAGAAGTGCCGCCTGCTCCTGCGCAGGGCTGTGGCCGAGGAACGCTTCCGCCTG GAGTTCTTCGTGCCGCCCAAAGCCTCCAGGCCCAAGGTCAGCATCCCACTGTCAGCCATC ATTGAGGTCCGCACCACCATGCCCCTGGAAATGCCAGAGAAGGATAACACATTCGTCCTC AAGGTAGAGAATGGAGCCGAATACATCTTGGAGACCATCGACTCTCTGCAGAAGCACTCG TGGGTAGCTGACATCCAGGGCTGCGTGGACCCCGGTGACAGTGAGGAAGACACCGAGCTC TCCTGTACCCGAGGAGGCTGTCTGGCCAGCCGCGTGGCCTCCTGCAGCTGTGAGCTCCTG ACTGATGAGACGACAGCCGTGGGTGCAGTGGTGACAGCCCCCCACAGCCGAGGTCGAGAT GCCGTCAGAGAATCCCTGATCCACGTCCCGCTAGAGACCTTTCTGCAGACCCTGGAATCC CCGGGCGGCAGCGGCAGTGACAGCAATAACACAGGGGAACAGGGTGCAGAGACGGATCCC GAGGCTGAACCCGAGCTGGAGCTATCCGACTACCCATGGTTCCACGGGACACTGTCCCGG GTCAAGGCTGCTCAACTGGTTCTGGCAGGGGGGCCCCGGAACCACGGCCTCTTCGTGATC CGCCAAAGTGAGACTCGGCCTGGGGAGTACGTGCTGACCTTCAACTTCCAGGGCAAGGCC AAGGCAAGTCACCTGCGCCTGTCCCTGAACGGCCACGGCCAGTGTCACGTACAGCATCTG TGGTTCCAGTCTGTGCTTGACATGCTCCGCCACTTCCACACACACCCCATCCCACTGGAG TCAGGGGGCTCGGCCGACATCACCCTTCGCAGCTATGTGCGGGCCCAGGACCCCCCACCA GATCTAAAGCTTAGGGACTATGGAGTGGATCTCATTGAAGTTTCAGACAATGGATGTGGG TCTCTTTCAGCTCTGAAACATCACACATGTAAGATTCAAGAGTTTGCCGACCTAACTGAG GTTGAAACTTTCGGCTTTCAGGGGGAAGCTCTGAGCTCACTGTGTGCACTGAGCGATGTC ACCATTTCTACCTGCCACGCATCGGCGAAGGTTGGACTCGACTGGTGTTTGATCACTATG GGAAAATCATCCAGAAAACCCCCTACCCCCACCCCAGAGGGATGA >chr7_random|SGP_v1.0_predicted_protein_4|555_AA MEAAPAGKETRTELPEFCELHAQAAAVDFAHKFCRFLRDNPAYDTPDAGASFSRHFAANF LDVFGEEVRRVLARVRKGFSLRNMSLCVVDGVRDMWHRRASPEPDAAAAPRTAEPRDKWT RRLRLSRTLAAKVELVDIQREGALRFMVADDAAAGSGGSAQWQKCRLLLRRAVAEERFRL EFFVPPKASRPKVSIPLSAIIEVRTTMPLEMPEKDNTFVLKVENGAEYILETIDSLQKHS WVADIQGCVDPGDSEEDTELSCTRGGCLASRVASCSCELLTDETTAVGAVVTAPHSRGRD AVRESLIHVPLETFLQTLESPGGSGSDSNNTGEQGAETDPEAEPELELSDYPWFHGTLSR VKAAQLVLAGGPRNHGLFVIRQSETRPGEYVLTFNFQGKAKASHLRLSLNGHGQCHVQHL WFQSVLDMLRHFHTHPIPLESGGSADITLRSYVRAQDPPPDLKLRDYGVDLIEVSDNGCG SLSALKHHTCKIQEFADLTEVETFGFQGEALSSLCALSDVTISTCHASAKVGLDWCLITM GKSSRKPPTPTPEG* # Gene 5 (Reverse). 5 exons. 274 aa. Score = 30.176115 Terminal 1040113 1040217 -7.22 - 0 0 0.00 5.37 6.82 -10.20 AA 240:274 gene_5 Internal 1041280 1041673 13.89 - 1 0 4.55 1.87 27.84 -19.98 AA 108:239 gene_5 Internal 1043720 1043805 -2.86 - 0 2 -0.27 3.55 2.11 3.27 AA 80:108 gene_5 Internal 1045041 1045099 11.54 - 2 0 5.48 3.27 4.56 4.04 AA 60: 79 gene_5 First 1046133 1046310 14.81 - 0 1 -2.08 2.33 15.30 6.48 AA 1: 60 gene_5 >chr7_random|SGP_v1.0_predicted_cDNA_5|822_NN ATGGAGTGGTGGGACCAATCTGAGGAGTCGTTGGAGGAGGAGCCACGGAAGGTGCTCGCC CCTGAGCCTGAGGAGATCTGGGTGGCGGAGATGCTGTGTGGCCTCAAGATGAAGCTGAAG CGACGGCGAGTGTCGCTCGTGCTCCCTGAGCACCACGAGGCCTTCAACAGGCTGCTTGAG GATCCTGTCATTAAAAGATTCCTGGCCTGGGACAAAGATCTGAGGGTGTCGGACAAGTAT CTCCTGGCTATGGTCATAGCGTATTTCAGCCGGGCCGGCTTCCCCTCCTGGCAATACCAA CGCATTCATTTCTTCCTGGCTCTCTACCTGGCCAATGACATGGAGGAGGACGACGAGGAC TCCAAACAAAACATCTTCCACTTCCTGTATAGGAAGAACCGCTCTCGCATACCCTTGCTC CGTAAGCGTTGGTTCCAGTTAGGCCATTCCATGAACCCGAGGGCCAGGAAGAACCGCTCT CGCATACCCTTGCTCCGTAAGCGTCGGTTCCAGTTATACCGTTCCACGAACCCGAGGGCC AGGAAGAACCGCTCTCGCATACCCTTGCTCTGTAAGCGTCGGTTCCAGTTATACCGTTCC ATGAACTCGAGGGCCAGGAAGAACCGCTCTCAGATAGTCCTGTTCCAGAAACGACGGTTC CACTTCTTCTGTTCCATGAGCTGCAGGGCTTGGGTTTCCCCAGAGGAGTTGGAGGAGAAC ACCGGACCCAGGGGAGATGTGGATTTTCAGCAGGAACTTTATTCCAATGCTAATGGCAGA CACCAGGCAGGAGGAGAGGAACCATTTGTGCAGATCATCTAG >chr7_random|SGP_v1.0_predicted_protein_5|274_AA MEWWDQSEESLEEEPRKVLAPEPEEIWVAEMLCGLKMKLKRRRVSLVLPEHHEAFNRLLE DPVIKRFLAWDKDLRVSDKYLLAMVIAYFSRAGFPSWQYQRIHFFLALYLANDMEEDDED SKQNIFHFLYRKNRSRIPLLRKRWFQLGHSMNPRARKNRSRIPLLRKRRFQLYRSTNPRA RKNRSRIPLLCKRRFQLYRSMNSRARKNRSQIVLFQKRRFHFFCSMSCRAWVSPEELEEN TGPRGDVDFQQELYSNANGRHQAGGEEPFVQII* # Gene 6 (Reverse). 1 exons. 94 aa. Score = 7.259305 Terminal 1047617 1047900 7.26 - 2 0 0.00 1.24 12.83 1.81 AA 1: 94 gene_6 >chr7_random|SGP_v1.0_predicted_cDNA_6|284_NN CCCCTGGGGTAGATCCCAGCCCCCCATGTAGGTCCCTTGGCTGGAAAAGGAAGAGGGAGT GGTCAGATGAATCTGAGGAGGAGCCGGAGAAGGAGCTCGCCCCTGAGCCTGAGGAGACCT GGGTAGTGGAGATGCTGTGTGGGCTCAAGATGAAGCTGAAGCAACAGCGAGTGTCATCCA TCCTCCCTGAGCACCACAAGGACTTCAACAGTCAGCTTGGTAGGAGGATACCCCAGAGAG CACCTCCAATCCTGTTCTTTCTAAAAAGAGGAAACTTCCAATAA >chr7_random|SGP_v1.0_predicted_protein_6|94_AA ccPGVDPSPPCRSLGWKRKREWSDESEEEPEKELAPEPEETWVVEMLCGLKMKLKQQRVS SILPEHHKDFNSQLGRRIPQRAPPILFFLKRGNFQ*