## date Tue Apr 15 18:56:24 2003 ## source-version: geneid v 1.1 -- geneid@imim.es # Sequence chrUn_random - Length = 611077 bps # Optimal Gene Structure. 2 genes. Score = 61.015875 # Gene 1 (Forward). 10 exons. 681 aa. Score = 54.565900 Internal 374790 374916 1.32 + 0 1 6.18 1.81 5.07 0.00 AA 1: 43 chrUn_random_1 Internal 375395 375490 1.50 + 2 1 4.24 4.63 4.21 0.00 AA 43: 75 chrUn_random_1 Internal 380359 380594 1.15 + 2 0 5.42 1.18 6.72 0.00 AA 75:153 chrUn_random_1 Internal 380708 381662 46.19 + 0 1 -0.42 -0.10 130.02 0.00 AA 154:472 chrUn_random_1 Internal 387689 387733 -1.58 + 2 1 2.21 2.37 2.94 0.00 AA 472:487 chrUn_random_1 Internal 422739 422845 0.94 + 2 0 5.62 3.52 2.40 0.00 AA 487:522 chrUn_random_1 Internal 436386 436511 2.17 + 0 0 4.75 3.08 6.17 0.00 AA 523:564 chrUn_random_1 Internal 436854 436907 0.46 + 0 0 3.90 0.45 7.13 0.00 AA 565:582 chrUn_random_1 Internal 444393 444677 4.19 + 0 0 3.35 3.16 13.22 0.00 AA 583:677 chrUn_random_1 Terminal 450538 450549 -1.79 + 0 0 6.06 0.00 0.19 0.00 AA 678:681 chrUn_random_1 >chrUn_random_1|geneid_v1.1_predicted_cDNA_1|2043_NN GGACTGTTGACATTCAGAGACATAGCTATAGAATTCTCTCTGGAGGAATGGCAATGCCTG GATTGTGCTCAGCGGAATTTATATAGACATGTGATGTTAGAGAACTACAGAAACTTGGTC TCCCTGGGTATTGCTGTCTCTAAGCCAGACTTGATCACCTGTCTGGAGCAAAATAAAGAG TCCCAGAATATAAAGAGAAATGAGATGGTAGCCAAACGCCCAGTTACGCGTTCCCATTTC ACCCAAGACCTTCAGCCAGAGCAGGGCATCAAAGATTCACTCCAAAAAGTAATACCAAGA ACATATGGAAAATGTGGACATGAGAAATTACAATTTAAAAAATGCCGTAAAAGTGTGGGT GAATGTGAGGTGCCCAAAGAGGTTATAGTGAAGTTAACCAATGTTTGTCAACTACCCAAA ACAAAATATTTCAGACTCATAAATATGTCAAAGTCTTTGGTAATTCATACTAGGGAGAAG TCCTACAAATGCAAAGAATGTGGCAAATCCTTTAACTGCTCCTCAAACCATACTACACAT AAAATAATTCATACTGGAGAGAAACCATATAGATGTGAGGAATGTGGCAAAGCCTTTAGC TGGTCCGCAAACCTTACTAGACATAAGAGAATTCATACTGGAGAGAAACCCTACACATGT GAAGAATGTGGCCAAGCCTTTAGGCGCTCCTCAGCACTTACTAACCACAAGAGAATTCAT ACTGGAGGGAGACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAGCGTATCCTCAACC CTCACTGACCACAAGAGAATTCATACTGGAGAGAAACCCTGCAGGTGTGAGGAATGTGGC AAAGCCTTTAGCTGGTCCTCAAACCTTAGTAGACATAAGAGAATTCATACTAGAGAGAAA CCCTATGCCTGTGAAGAATGTGGCCAAGCCTTTAGCTTATCCTCGAACCTTACTAGACAT AAGAGAATTCATACTGGAGAGAAACCCTACACATGTGAAGAATGTGGCCAAGACTTTAGG CGCTCCTCAGCACTTACTATCCACAAGAGAATTCATACTGGAGAGAGACCCTACAAATGT GAAGAGTGTGGCAAAGTCTTTAGCTTATCCTCAACCCTCACTGACCACAAGAGAATTCAT ACTGGAGAGAGACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAGCTTATCCTCAACC CTCACTGACCACAAGAGAATTCACACTGGAGAGAGACCCTACACATGTGAAGAATGTGGC AAAGCCTTTAATTGCTCCTCAACCCTTATGCAACATAAGAGAATTCATACTGGAGAGAAA CCCTACAAATGTGAAGAATGTGACCAAGCTTTTAAGTGGCATTCAAGTCTTGCTAAACAT AAGATAATTCACACTGGAGAGAAACCCTACAAATATGATATCTTTGTTTACTTAGAAAGA CAGCAAAAGCAACTGAAAGGGGAATCTGGATTGGGAAAGTTGACATTAATCAACTCATTA TTCCTCACAGATTTGTATTCTCCAGAGTACCCAGGTCCTTCTCATAGAACTAAAAAGACT GTACAGGTCTCCCGATTCCTGTTGGTGCAACCCCAGAGCTGCTGCACAGCGGAAGAGGCC TTGGCACACCCCTTCTTCCTGCAGTACGTGGTGGAGGAAGTGCGGCACTTCAGCCCCCGG GGGAAGTTCAAGGTGATCGCTCTGACTGTGCTGGCTTCAGTGCTGATCTACTGCCAGTAC CACCGGGTGGACAAGAAATACCCCTGGAAGGACCTGGGAGGGGAAAATAATGCCACCTTC AGTTTCGGTTTTCAGAAAGGGGTTCGCAAGGAAAGTACATTTGTCCAGGAATCAGGTCTG AGTGCCATAGCCCAGTACACAGGCTATGGAACCAGCAAATTTGAGTTCCAATCCAAAACT CTGTCTCCGAACCAGATTAAGAGACAGGGTCCTAGGCCATGTCAACATGTCATACATCAG AAATGTGGTGTCTGTTCTGGACTTCTGCTTTGCTGGTTTGCCCTTAACATGGATCTTTTT TGA >chrUn_random_1|geneid_v1.1_predicted_protein_1|681_AA GLLTFRDIAIEFSLEEWQCLDCAQRNLYRHVMLENYRNLVSLGIAVSKPDLITCLEQNKE SQNIKRNEMVAKRPVTRSHFTQDLQPEQGIKDSLQKVIPRTYGKCGHEKLQFKKCRKSVG ECEVPKEVIVKLTNVCQLPKTKYFRLINMSKSLVIHTREKSYKCKECGKSFNCSSNHTTH KIIHTGEKPYRCEECGKAFSWSANLTRHKRIHTGEKPYTCEECGQAFRRSSALTNHKRIH TGGRPYKCEECGKAFSVSSTLTDHKRIHTGEKPCRCEECGKAFSWSSNLSRHKRIHTREK PYACEECGQAFSLSSNLTRHKRIHTGEKPYTCEECGQDFRRSSALTIHKRIHTGERPYKC EECGKVFSLSSTLTDHKRIHTGERPYKCEECGKAFSLSSTLTDHKRIHTGERPYTCEECG KAFNCSSTLMQHKRIHTGEKPYKCEECDQAFKWHSSLAKHKIIHTGEKPYKYDIFVYLER QQKQLKGESGLGKLTLINSLFLTDLYSPEYPGPSHRTKKTVQVSRFLLVQPQSCCTAEEA LAHPFFLQYVVEEVRHFSPRGKFKVIALTVLASVLIYCQYHRVDKKYPWKDLGGENNATF SFGFQKGVRKESTFVQESGLSAIAQYTGYGTSKFEFQSKTLSPNQIKRQGPRPCQHVIHQ KCGVCSGLLLCWFALNMDLF* # Gene 2 (Reverse). 2 exons. 106 aa. Score = 6.449975 Terminal 520614 520733 0.10 - 0 0 0.00 4.31 6.30 0.00 AA 67:106 chrUn_random_2 Internal 555089 555287 6.35 - 1 0 -1.16 2.46 26.41 0.00 AA 1: 66 chrUn_random_2 >chrUn_random_2|geneid_v1.1_predicted_cDNA_2|319_NN CCAGGTCTTCCAGCTGGAATCCACCTTCGACCTGAAGCGCTACCTGAGCAGCGCCGAGCG CGCCGGCCTGGCCGCCTCCCTGCAGCTCACCGAGACGCAGGTTAAGATCTGGTTCCAGAA CCGCCGCAACAAGTGGAAGCGGCAGCTGGCAGCCGAGCTGGAGGCGGCCAGCCTGTCCCC GCCGGGAGCGCAGCGCCTGAACTCAGATGAAGGAGCCAACACGCTCATTACAGAAAGTCA CCCGTCCCAGCTAGAGGGGTCTGGGGCAGCCCCTCACACCAAGCTGACACTTGCAGACAC CTGGTCAATCAAACCGTGA >chrUn_random_2|geneid_v1.1_predicted_protein_2|106_AA cQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQNRRNKWKRQLAAELEAASLS PPGAQRLNSDEGANTLITESHPSQLEGSGAAPHTKLTLADTWSIKP*