## date Fri May 9 20:26:16 2003 ## source-version: geneid v 1.1 -- geneid@imim.es # Sequence chr15_random - Length = 366089 bps # Optimal Gene Structure. 10 genes. Score = 959.832674 # Gene 1 (Reverse). 4 exons. 313 aa. Score = 131.136645 Internal 100 519 83.43 - 0 0 -0.44 -0.26 25.53 61.00 AA 174:313 gene_1 Internal 574 695 24.08 - 2 0 -0.69 2.69 15.15 12.29 AA 133:173 gene_1 Internal 855 1002 -4.71 - 0 1 -1.35 -1.32 11.08 -1.85 AA 84:133 gene_1 First 4880 5128 28.34 - 0 0 -1.62 0.38 15.49 20.49 AA 1: 83 gene_1 >chr15_random|SGP_v1.0_predicted_cDNA_1|939_NN ATGGAGCAGCTCAACAGGATCCTGCTGCACCTGGAGTCAGAGCTATCCCAAAACCGGGAA GAGAGGTACCACGCCCAAGAGCACGAGGACCTGTGGAACATCAAGGTCGAGCTGGAGGCT GAGATTGCCACTTACTGCCGCCTGCTAGAAGACGGGGAGGATTTCAATCTCCTGGATGCT CTGGACAGCAGTAAATACCTGCAAGCTATCCAAAAGAACAGCCCCCGCAGGATAGTGGAC GGGAAAGTGATCACGAAAGACCCCCTAAGCCCCCGCTCACTGGCAGCGTTCCTGGTCGGC CGTGACTGCACTGTGGACATGCCCATCCTGAAGGCCACCGTGGCCTTCTATGATGCAGTC CACGCAGGAAATCCACGAGAAAGTTCTAAACAGAGCCCCGTGGAAGAGACAGCCAATTCC ACCAACTGCCACATTCTCAACATGTACCGGAGGAACACATGGCTGTACCAGGCACTGTGG GAAGGCAAGCGGGTTCAGAGCATGGAGCAGATCTGCGAGGGTCGCACGCAGCAGGCTTTT GCAGTTCCAGCCACAGCCTTTGGATTCAGCGTCATGTTTTATTACCCCTACTTGCAGGAT GGGATCGAGCAGTCCCTGGGCATGCAGAGGGTCTACACCCTGCAGGATTGGCTGTATCAG AGCGACTGCATCTCCTTGCACTGCAGTCTCAACGAACTTAAGCACCACCTCATCAATGAC TTTACCATAAAGCAGATGAGGCAGGGAGCATTCCTTGTGAACGCAGCCCGTGGTGGCCTG GTGGACGAGAGAGCCTTAGCACAGGCCCTCAAGGAAGGCAGGATACGAAGGGCAGTCGTC GACGTGAACGAGTCGCAGCCCTTTAGCTTTGCTCAGGGTCCGTTGAAAGATGCCCCCAAT CTCATCTGCACTCCTCTCACTGCCTGCTACAGCCAGCAG >chr15_random|SGP_v1.0_predicted_protein_1|313_AA MEQLNRILLHLESELSQNREERYHAQEHEDLWNIKVELEAEIATYCRLLEDGEDFNLLDA LDSSKYLQAIQKNSPRRIVDGKVITKDPLSPRSLAAFLVGRDCTVDMPILKATVAFYDAV HAGNPRESSKQSPVEETANSTNCHILNMYRRNTWLYQALWEGKRVQSMEQICEGRTQQAF AVPATAFGFSVMFYYPYLQDGIEQSLGMQRVYTLQDWLYQSDCISLHCSLNELKHHLIND FTIKQMRQGAFLVNAARGGLVDERALAQALKEGRIRRAVVDVNESQPFSFAQGPLKDAPN LICTPLTACYSQQ # Gene 2 (Forward). 2 exons. 103 aa. Score = 26.297531 First 53237 53254 -7.14 + 0 0 -0.58 4.44 1.69 -1.80 AA 1: 6 gene_2 Terminal 79836 80126 33.44 + 0 0 2.88 0.00 18.92 17.14 AA 7:103 gene_2 >chr15_random|SGP_v1.0_predicted_cDNA_2|309_NN ATGGAATATTATCAACAGCATGTTGGCAAGTCAAGTTCCCCCACTGAGTTCTCCACACAT AAGGAGGGAGTCAACACCATTGCTAAGTCGGATCAGCTCAAGGGTCTCCAGTATCAGTTT TATCAGATCCCAGGGACCTGCCTGCTCCCAGAGGTGACAGAGAAAAATCAAGGAACGATC TGTATGGTCACTGACATGGATGAAACCCTTGTGCATAGCTCCATTAAGCCAATCAGCAAT GCTGACTGCCTAGTGACTGTAAAGATTGAGGGGACCATGAGGCCTTATATGGATGAGTTC CTGAGATGA >chr15_random|SGP_v1.0_predicted_protein_2|103_AA MEYYQQHVGKSSSPTEFSTHKEGVNTIAKSDQLKGLQYQFYQIPGTCLLPEVTEKNQGTI CMVTDMDETLVHSSIKPISNADCLVTVKIEGTMRPYMDEFLR* # Gene 3 (Forward). 1 exons. 75 aa. Score = 27.670961 Single 81524 81748 27.67 + 0 0 -1.31 0.00 12.84 26.05 AA 1: 75 gene_3 >chr15_random|SGP_v1.0_predicted_cDNA_3|225_NN ATGGGTGTGCTGGACCAGTGTGAGGTGTTCTGGGGTTGCCTAGCCCATGAGTCACGTTTG TTCCACCAGGGCTGCTATGTCAATGACCTCAGCCATCTGGGGAGGGACCTGAGGAAAACT CTCATCCTGGACAACTCGCCTGCTTCTTACGTCTTCCACACAGAGAATGCAGTGCCTGTG CAGTCCTGGTTTGATAACATTCCAGACAGCAGCTGCTGCACCTGA >chr15_random|SGP_v1.0_predicted_protein_3|75_AA MGVLDQCEVFWGCLAHESRLFHQGCYVNDLSHLGRDLRKTLILDNSPASYVFHTENAVPV QSWFDNIPDSSCCT* # Gene 4 (Forward). 2 exons. 47 aa. Score = 7.489803 First 90863 90868 -5.85 + 0 0 2.26 1.87 1.08 -0.60 AA 1: 2 gene_4 Terminal 95767 95901 13.34 + 0 0 1.52 0.00 15.45 3.86 AA 3: 47 gene_4 >chr15_random|SGP_v1.0_predicted_cDNA_4|141_NN ATGGCGGTCACCATTGGAGAAGATGCTCAGGAAGAACAAGAAGCTGCAGTCAACCCTGCT GAAGGTGGCATATGGGTCCAGGCTCTTGAGCTGGTCTTCGACATGGTACATGTGGATGCA GGCTTTGAGCAGTGTGAGTAG >chr15_random|SGP_v1.0_predicted_protein_4|47_AA MAVTIGEDAQEEQEAAVNPAEGGIWVQALELVFDMVHVDAGFEQCE* # Gene 5 (Reverse). 2 exons. 63 aa. Score = 4.392484 Terminal 128722 128856 12.11 - 0 0 0.00 1.52 14.04 4.56 AA 19: 63 gene_5 First 129284 129337 -7.72 - 0 0 2.31 -3.69 1.62 3.16 AA 1: 18 gene_5 >chr15_random|SGP_v1.0_predicted_cDNA_5|189_NN ATGAGGTCCCCATGGATCTTGCAGCTCTCAGGGAGTGGGTTCCAGCTGCTCATGGTCACC ATTGGAGAAGATGCTCAGGAAGAACAAGGAGCTGCAGTCAACCCTGCTGAAGGTGGCATA TGGGTCCAGGCTCTTGAGCTGGTCTTTGACATGGTACATGTGGATGCAGGCTTTGAGCAG TGTGAGTAG >chr15_random|SGP_v1.0_predicted_protein_5|63_AA MRSPWILQLSGSGFQLLMVTIGEDAQEEQGAAVNPAEGGIWVQALELVFDMVHVDAGFEQ CE* # Gene 6 (Reverse). 2 exons. 114 aa. Score = 31.686153 Terminal 143228 143539 37.52 - 0 0 0.00 2.57 16.64 24.82 AA 11:114 gene_6 First 174403 174432 -5.83 - 0 0 1.77 2.11 3.50 -3.00 AA 1: 10 gene_6 >chr15_random|SGP_v1.0_predicted_cDNA_6|342_NN ATGGTCATGACCCACTTCACTGAACCAGATCATGTTGGACAGTCAAGTTCCCCCGCTGAG CAATCCACACATAAGGAGGGAGTCAACACCATTGCTATGTCGGATCAGCTCCAGCGTCTC CAATATCAGTTTTATCAGATCCCAGGAACCTGCCTGCTCCCAGAGGTGACAGAGAAAAAT CAAGGAAGGATCTGTATGGTCACTGACCTGGATGAAACCCTTGTGCATAGCTCCTTTAAG CCAATCAGCAATGCTGACTGCCTAGTGCCTGTAGAGCTTGAGGGGACCATGCACCAGATC CATGTGCTCATGAGGCCTTATATGGATGAGTTCCTGACATGA >chr15_random|SGP_v1.0_predicted_protein_6|114_AA MVMTHFTEPDHVGQSSSPAEQSTHKEGVNTIAMSDQLQRLQYQFYQIPGTCLLPEVTEKN QGRICMVTDLDETLVHSSFKPISNADCLVPVELEGTMHQIHVLMRPYMDEFLT* # Gene 7 (Forward). 2 exons. 123 aa. Score = 16.813297 First 233380 233741 24.03 + 0 2 2.49 -0.12 23.45 1.30 AA 1:121 gene_7 Terminal 235137 235143 -7.22 + 1 0 5.07 0.00 0.00 -0.40 AA 121:123 gene_7 >chr15_random|SGP_v1.0_predicted_cDNA_7|369_NN ATGCCGCCCCTAGACCAGCCAAGCTGCAAGGTGCTGTATGACTTCCAGCCTGAGAACCAT GGGGAGCTGGGCTTCCATGAGGGTGACGTCTTCACGCTGATCAACCAGATCAACGAGAAC TGGTACCAGGGCATGCTGGACAGCCAGTTGGGCTTCTTCCTGCTCAGCTACATGGACGTG CTCATGCCTCTGCCCAGTGACTCACTGGTGCCCCCGCCCCGCCCCTCCATCCACACTGGG TGGCACCCCCGCCAGGTCTCCTGCCTTCCATGGGCTCCTGCTGCCAAGGCGGTGTCCAAG CCTGCCGGCGCCACCCAGGCCCGGGCCCTTGAGGTACTCCCTCAGCAGGGAGCCACACTT GGCTTTTGA >chr15_random|SGP_v1.0_predicted_protein_7|123_AA MPPLDQPSCKVLYDFQPENHGELGFHEGDVFTLINQINENWYQGMLDSQLGFFLLSYMDV LMPLPSDSLVPPPRPSIHTGWHPRQVSCLPWAPAAKAVSKPAGATQARALEVLPQQGATL GF* # Gene 8 (Reverse). 2 exons. 69 aa. Score = 8.072053 Terminal 235742 235790 -11.70 - 1 0 0.00 3.28 1.41 -4.60 AA 53: 69 gene_8 First 236616 236773 19.77 - 0 2 -3.19 6.03 11.62 10.56 AA 1: 53 gene_8 >chr15_random|SGP_v1.0_predicted_cDNA_8|207_NN ATGGAATTCTCCTGGCTGGAGACGCGCTGGGCGCGGCCCTTTTACCTGGCGTTCGTGTTC TGCCTGGCCCTGGGGCTGCTGCAGGCCATTAAGCTGTACCTGCGGAGGCAGCGGCTGCTG CGGGACCTGCGCCCCTTCCCAGCGCCCCCCACCCACTGGAAAAAGAGGGAGATGGGAAAG ACATACTCCTTGTTCACTGAGAGATAA >chr15_random|SGP_v1.0_predicted_protein_8|69_AA MEFSWLETRWARPFYLAFVFCLALGLLQAIKLYLRRQRLLRDLRPFPAPPTHWKKREMGK TYSLFTER* # Gene 9 (Reverse). 3 exons. 65 aa. Score = 53.347298 Terminal 241084 241235 41.32 - 2 0 0.00 3.46 22.62 16.58 AA 15: 65 gene_9 Internal 241516 241555 16.28 - 0 1 4.81 6.61 6.00 2.25 AA 2: 15 gene_9 First 247904 247906 -4.25 - 0 0 1.30 4.34 0.00 -0.30 AA 1: 1 gene_9 >chr15_random|SGP_v1.0_predicted_cDNA_9|195_NN ATGGCCCAGAGCATGATTCCCATCAATGAGCCCTATGGAGATGACATGGATGCCACCTAC CGCCCCATGTACTCCAGCGATGTGCCCCTTGACCCGCTGGAGATGCACATGGACATGGAT GGAGACTACCCCATCGACACCTACAGCGACGGCCTCAGGCCCCCGTACCCCACTGCAGAC CACATGCTGGCCTAG >chr15_random|SGP_v1.0_predicted_protein_9|65_AA MAQSMIPINEPYGDDMDATYRPMYSSDVPLDPLEMHMDMDGDYPIDTYSDGLRPPYPTAD HMLA* # Gene 10 (Forward). 3 exons. 559 aa. Score = 652.926450 First 269711 270920 502.24 + 0 1 0.02 1.04 237.82 185.18 AA 1:404 gene_10 Internal 270942 271234 114.88 + 2 0 -1.45 -0.07 57.96 49.26 AA 404:501 gene_10 Internal 271277 271450 35.81 + 0 0 -4.86 -0.14 27.90 16.66 AA 502:559 gene_10 >chr15_random|SGP_v1.0_predicted_cDNA_10|1677_NN ATGCAGCGCCACTTCGGCGCGCTCCTGCAGCTGGGCGTCAACAAGTTCTCGCTGCGGATG TTCGGCAGCCAGAAGGCCGTGGAGCGCGAGCAGGAGCGCGTCCAGTCAGCGGGGTCCTGG ATCATCCACCCGTACAGCGACTTCAGGTTCTACTGGGACTTCACCATGCTGCTGTTCATG GTGGGAAACCTCATCATCATCCCAGTGGGCATCACCTTCTTCAAGGACGAGACCACTGCC CTGTGGATCGTGTTCAACGTGGTCTCGGACACCTTCTTCCTCATGGACCTGGTGTTGAAC TTCCGCACCGGCATTGTGATCGAGGACAACACGGAGATCATCCTGGACCAAGAGAAGATC AAGAAGTACGTGCGCACGTGGTTCATGGTGGACTTCGTGTCCTCCATCCCCGTGGACTAC ATCTTCCTCATCGTGGAGAAGGGCATCGACTCCGAGGTCTACAAGACGGCGTGCGCCCTG CGGATCGTGCGCTTCACCAAGATCCTCAGCCTCCTGCGGCTGCTGCGCCTCTCGCGCCTG ATCCGCTACATCCACCAGTGGGAGGAGATCTTCCACATGACCTATGACCTGGCCAGCGCG GTGATGCGGTTCTGCAACCTCATCAGTATGATGCTGCTGCTCTGCCACTGGGATGGCTGC CTGCAGTTCCTGGTGGCCATGCTGCAGGACTTCCCGTGCAACTGCTGGGTGTCCATCAAT GGCATGGTGAACCACTGGTGGAGCGAACTGTATTCCTTCGCACTCTTCAAGGCCATGAGC CACATGCTGTGCATTGGGTATGGCCGGCAGGCGCCCGAGAGCATGACGGACATCTGGCTG ACCATGCTCAGCATGATTGTGAGTGCCACCTGCTACGCCATGTTCATCGGCCACGCCACT GCCCTCATCCAGTCGCTGGACTCCTCGCGGCGCCAGTACCAGAAGTACAAGCAGGTGGAG CAGTACATGTCCTTCCACAAGCTGCCGGCCGACTTCCGCCAGAAGATCCACGACTACTAC GAGCACCGTTACCAGGGCAAGATGTTCGACGAGGACAGCATCCTGGGCGAGCTCAACGGG CCCCTGCGGGAGGAGATTGTCAACTTCAACTGCCGGAAGCTGGTGACCTCCATGCCGCTG TTCGCCAATGCTGACCCCAACTTCGTCACGGCCATGCTGACCAAGCTCAAGTTCGAGGTC TTCCAGCCGGGCACCATCGGGAAGATGTACTTCATCCAGCACGGCGTGGTCAGCGTGCTC GCTAAGGGCAACAAGGAGATGAAGCTGTTCGATGGCTCCTACTTCGGGGAGATCTGCCTG CTCACCCGGGGCCACCGCATGGCGAGTGTGCGGGCCAACACCTATTGCCGCCTCCTTTCG CTGAGCGTGGACAACTTCAACGAGGTGCTGGAGGAGTACCCCATGATGCGGCGCGCCTTC GAGACGGTGGCCATCGACCGCCTGGACCGCATCGGCAAGAAGAATTCCATCCTCCTGCAC AAGAACGCCATCATCCAGGAGATCGTCAAGTACGACGGCGAGATGGTGCAGCAGGCCGAG CTGGGTCGGCGCCTGGGCCTCTTCCCGCCGCCGCCGCCGCCGCAGGTCACCTCGGCCATC GCCACGCTGCAGCAGGCCGTGGTCATGAGCTTCTGCCCGCAGGTGGCGCGGCCGCTC >chr15_random|SGP_v1.0_predicted_protein_10|559_AA MQRHFGALLQLGVNKFSLRMFGSQKAVEREQERVQSAGSWIIHPYSDFRFYWDFTMLLFM VGNLIIIPVGITFFKDETTALWIVFNVVSDTFFLMDLVLNFRTGIVIEDNTEIILDQEKI KKYVRTWFMVDFVSSIPVDYIFLIVEKGIDSEVYKTACALRIVRFTKILSLLRLLRLSRL IRYIHQWEEIFHMTYDLASAVMRFCNLISMMLLLCHWDGCLQFLVAMLQDFPCNCWVSIN GMVNHWWSELYSFALFKAMSHMLCIGYGRQAPESMTDIWLTMLSMIVSATCYAMFIGHAT ALIQSLDSSRRQYQKYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDEDSILGELNG PLREEIVNFNCRKLVTSMPLFANADPNFVTAMLTKLKFEVFQPGTIGKMYFIQHGVVSVL AKGNKEMKLFDGSYFGEICLLTRGHRMASVRANTYCRLLSLSVDNFNEVLEEYPMMRRAF ETVAIDRLDRIGKKNSILLHKNAIIQEIVKYDGEMVQQAELGRRLGLFPPPPPPQVTSAI ATLQQAVVMSFCPQVARPL