## date Wed May 7 23:24:33 2003 ## source-version: geneid v 1.1 -- geneid@imim.es # Sequence chr8_random - Length = 526343 bps # Optimal Gene Structure. 9 genes. Score = 1113.437186 # Gene 1 (Reverse). 7 exons. 474 aa. Score = 383.678777 Terminal 47683 48218 226.71 - 2 0 0.00 -3.42 43.07 187.36 AA 296:474 gene_1 Internal 48335 48546 69.83 - 1 1 -0.10 -1.81 15.40 66.11 AA 225:296 gene_1 Internal 48573 48693 4.99 - 2 2 -1.05 -5.60 13.49 9.06 AA 185:225 gene_1 Internal 48733 48933 55.98 - 2 1 1.23 -1.39 11.44 55.03 AA 118:185 gene_1 Internal 49184 49420 21.12 - 2 1 3.14 4.22 8.54 10.76 AA 39:118 gene_1 Internal 51358 51450 8.61 - 2 1 3.11 4.15 3.84 4.86 AA 8: 39 gene_1 First 88660 88681 -3.56 - 0 1 3.68 2.68 1.83 -2.20 AA 1: 8 gene_1 >chr8_random|SGP_v1.0_predicted_cDNA_1|1422_NN ATGTGGTACTCTGCAGATGCAGGGCATTGCATTACCAAACCTGAGATGATCTTCAAGCTA GAACAAGGAGCAGAGCCATGGATAGTAGAAGAAACCCCAAACCTGAGACTTTCAGCTGTC CAGATCATTGATGACCTTATTGAAAGGAGCCATGAAAGTCATGATAGATTTTTCTGGAAA ATTGTAATCACCAACAGCAACACATCAACTCAGGAGAGAGTTGAATTAGGAAAAACATTT AATTTGAACTCAAACCATGTTTTAAATCTGATTATAAATAATGGAAACAGTTCAGAAATG AAGCCTGGGCAGTTTAATGTCTGCCAGAACGTGCTTTTCCCTATTAAGCCTGGGATAACT CAGGTAGGACAGCCAACTTGCTGTAGAAAGTCTGACTTCACCAAACATCAGCAAACACAC ACAGGAGAGAAACCCCATGAATGTGTTGAATGTGAGAAACCCTCCGTTAGCAAATCAGAC CTTATGATACAGCACAAGATGCCTACTGAGGAAAAACCTTATGCCTGTAACTGGTGTGAA AAATTGTTCAGCTGGGAAAAGCCCTATGGATGCAATGAATGTGGAAAAACCGTTTGCCAT AAGTCATTCCTTACTTTACATCAGAGAACTCATACTGGGGAAAAACCATATGCATGTAAC AAATGTGGAAAAACTACATCACAGAACTCACACGGGAAAAACCCTATGAATGTAATGAAT GTGGAAAATCCTTTTACTGTAAGTCATAAGTCATTTCTAACTATACGTCAGAGAACTCAT GCTGGCAAAAAACCCTATGAATGTAATAAATGTGAGAAAACCTTTATCAATAAATTAAAC CTTGGGATACACAAGAGAACTCACACAGGGGAAAGACCCTATGAATTCATTCCTCACCAT ACACCAGAGTACTCACACGGGGAGAAACCGTATGGATGTAACGAAAGTGGAAAAACTTTT TGTCAGAAATCATACCTTATTATACATCAGAGAACTCACACTGGGGAAAAGCTCTATGAA TGTAATGAATGTGGAAAATCCTTTCATCAGAAGGCAAATATTCAGAAGCATCAAGGTATT CACACGGGGGAGAAACCCTATGAATGTAGCAAATGTGGAAAAACCTTCAGTCAGAAGTCA GTCCTCACTGTACATCATAGAACTCAGACTGGAGAAAAACCTTTCGAATGTAATCAGTGT GGGAAAACTTTTTGTTACAAGTCAAACCTCAATATGCATCAGGGAATTCACTCAGGAGAG AAACCCTGTGAATGTGATGAATGTAGGAAAACTTTTTACCATAAGGCAGTTCTCACCATA CATCAGAGAACTCACACAGGTGAGAAGCCATTTGAATGTAAGAAAACCTTCTCTCAGAAG TCAAAACTCTTTGTACAGCACAGAACTCACACAGGGGAATAA >chr8_random|SGP_v1.0_predicted_protein_1|474_AA MWYSADAGHCITKPEMIFKLEQGAEPWIVEETPNLRLSAVQIIDDLIERSHESHDRFFWK IVITNSNTSTQERVELGKTFNLNSNHVLNLIINNGNSSEMKPGQFNVCQNVLFPIKPGIT QVGQPTCCRKSDFTKHQQTHTGEKPHECVECEKPSVSKSDLMIQHKMPTEEKPYACNWCE KLFSWEKPYGCNECGKTVCHKSFLTLHQRTHTGEKPYACNKCGKTTSQNSHGKNPMNVMN VENPFTVSHKSFLTIRQRTHAGKKPYECNKCEKTFINKLNLGIHKRTHTGERPYEFIPHH TPEYSHGEKPYGCNESGKTFCQKSYLIIHQRTHTGEKLYECNECGKSFHQKANIQKHQGI HTGEKPYECSKCGKTFSQKSVLTVHHRTQTGEKPFECNQCGKTFCYKSNLNMHQGIHSGE KPCECDECRKTFYHKAVLTIHQRTHTGEKPFECKKTFSQKSKLFVQHRTHTGE* # Gene 2 (Reverse). 2 exons. 155 aa. Score = 15.753719 Terminal 214023 214174 2.86 - 2 0 0.00 1.54 -1.73 15.39 AA 105:155 gene_2 First 214250 214562 12.90 - 0 1 -1.28 -0.77 8.67 17.61 AA 1:105 gene_2 >chr8_random|SGP_v1.0_predicted_cDNA_2|465_NN ATGAAACAAAAGTTTTCTAAGGTAGACTTTTCCCGGTGTTTTCATCTACATAAGGTGGCA TGCTTGTTTTCTGATTACTCCCATGATCCCAATGCCTTGTCCATCCCTGGGGACAAATCA AAGAAGAAAAATAGAAGGTCATCTTTGGGTCACTGCTATTCAGTTTGCTGTGCCAAGCTG AAAACCAAGGCCATTAAATATGAAAATCCACTCATTGTCTCAGGCTTGATTGTATCCTGT CTTTCAGATCAGACTCACCATAGTCATAGCAACCCTAATAGGCGGATGTGCATTGGACCA CATCATTTGCAGGACATGAAAGGGGGGTACTTTGTGAGCCCAGATAAGCCTATTGCATGG CCATTAATGGCATATTCAGCCCTTGCTGAATTAATCTATTATTGCCTCTTGTCTTTGGTA ACCATAACATGTTGTTGGAAGGCTGTGCAAAATTTGAGTAACTGA >chr8_random|SGP_v1.0_predicted_protein_2|155_AA MKQKFSKVDFSRCFHLHKVACLFSDYSHDPNALSIPGDKSKKKNRRSSLGHCYSVCCAKL KTKAIKYENPLIVSGLIVSCLSDQTHHSHSNPNRRMCIGPHHLQDMKGGYFVSPDKPIAW PLMAYSALAELIYYCLLSLVTITCCWKAVQNLSN* # Gene 3 (Forward). 3 exons. 122 aa. Score = 11.746218 First 266734 266741 -9.44 + 0 2 0.47 2.11 0.69 -0.80 AA 1: 3 gene_3 Internal 267298 267458 21.26 + 1 1 2.73 0.81 7.28 18.41 AA 3: 57 gene_3 Terminal 284120 284316 -0.07 + 2 0 -2.41 0.00 1.93 13.43 AA 57:122 gene_3 >chr8_random|SGP_v1.0_predicted_cDNA_3|366_NN ATGGCAAGAATCGCTGTTCTGGCATCCATTTGCGTTACTCAGGCATTTATGATGTGGAAG TTCATTAATTTTCAGCTTCGAAGGTGGAGGGAACATTCTGCTTTTCAGGCACCAGCTGTG AAGAAGAAACCAACAGTAACTAAAGGCAGATCTTCTAAAAAAGGAACAGGTTATGAATAT GCAACAAAAATAACCCTTGACAGATTTTTCTTCATCCTGGTTATGAAACCAGGCTTCATT TTTCCATATGGCATTCCAACTGCTGGCACAATTGTTTTATTTCACTTGGCATTGACTGCC CTATTACTGTCTTCCATTGCCTTTTCTTATCAGTGTGTGTCCAAATTAGCCATTTCTGCC ACTTAA >chr8_random|SGP_v1.0_predicted_protein_3|122_AA MARIAVLASICVTQAFMMWKFINFQLRRWREHSAFQAPAVKKKPTVTKGRSSKKGTGYEY ATKITLDRFFFILVMKPGFIFPYGIPTAGTIVLFHLALTALLLSSIAFSYQCVSKLAISA T* # Gene 4 (Reverse). 6 exons. 158 aa. Score = 32.330048 Terminal 297703 297826 -0.89 - 1 0 0.00 0.31 6.28 4.53 AA 117:158 gene_4 Internal 332051 332071 5.65 - 1 2 4.55 4.62 2.27 1.16 AA 110:117 gene_4 Internal 332262 332332 12.34 - 0 2 2.28 4.68 7.21 4.41 AA 87:110 gene_4 Internal 333426 333542 6.96 - 0 0 0.68 4.19 0.80 12.98 AA 48: 86 gene_4 Internal 333665 333786 21.03 - 2 0 2.72 3.77 8.47 12.10 AA 7: 47 gene_4 First 356343 356361 -12.77 - 0 1 1.46 -0.15 0.48 -1.90 AA 1: 7 gene_4 >chr8_random|SGP_v1.0_predicted_cDNA_4|474_NN ATGAGGAGGTACTATGCAAAAGAACAAGCTACTGAATCAGTGTCCCTTTATTACTATGGC ATCAAAGATTTGGCTACTGTTTTCTTCTACATGCTAGTGGCGATAATTATTCATGCCGTA ATTCAAGAGTATATGTTGGATAAAATTAACAGGCGAATGCACTTCTCCAAAACAAAACAC AGCAAGTTTAATGAATCTGGTCAGCTTAGTGCGTTCTACCTTTTTGCCTGTGTTTGGGGC ACATTCATTCTCATCTCTGAAGATATTCCTCGTCAGCTTGTCTACATTGGTCTTTACCTC TTCCACATTGCTGGAGCTTACCTTTTGAACAATGAAAAGTATCAGAAAGGACCTGCACAG ACCCCAGAAAAGCACCCAGAATATAAAAGCATAATTAAATTGCAATTGGGCAAAAACACC AGGCATAATAAAACACTCAATAAATCTGAAGAAAATATTCATAAAAGCAAATAA >chr8_random|SGP_v1.0_predicted_protein_4|158_AA MRRYYAKEQATESVSLYYYGIKDLATVFFYMLVAIIIHAVIQEYMLDKINRRMHFSKTKH SKFNESGQLSAFYLFACVWGTFILISEDIPRQLVYIGLYLFHIAGAYLLNNEKYQKGPAQ TPEKHPEYKSIIKLQLGKNTRHNKTLNKSEENIHKSK* # Gene 5 (Forward). 1 exons. 46 aa. Score = 28.276470 Single 367163 367300 28.28 + 0 0 1.03 0.00 8.61 29.42 AA 1: 46 gene_5 >chr8_random|SGP_v1.0_predicted_cDNA_5|138_NN ATGGTTGGCGACCTGACTGGCGCCCAGGCCTATGCCTCCACCGCCAAGTGCCTGAACATC TGGGCCCTGATTTTGGGCATCTTCATGACCATTCTGCTCATCATCATCCCAGTGTTGATC TTCCAAGCCTATCAATAG >chr8_random|SGP_v1.0_predicted_protein_5|46_AA MVGDLTGAQAYASTAKCLNIWALILGIFMTILLIIIPVLIFQAYQ* # Gene 6 (Forward). 2 exons. 123 aa. Score = 7.656072 First 471969 472101 3.00 + 0 1 -0.15 1.75 7.45 2.86 AA 1: 45 gene_6 Terminal 472419 472654 4.66 + 2 0 2.71 0.00 0.82 12.93 AA 45:123 gene_6 >chr8_random|SGP_v1.0_predicted_cDNA_6|369_NN ATGCCCTGCCCAGCTCATGGCCTGTGGTGCCAGGACTGCACCCTGACCACCAACTCCAGC CATTGCACCCCAAAGCAGTGCCAGCCGTCCGACACGGTGTGTGCCAGTGTCCGAATCACC GATCCCAGCAGCAGCAGGAAGGATCACTCGGTGAACAAGATGTGTGCCTCCTCCTGTGAC TTCGTTAAGCGACACTTTTTCTCAGACTATCTGATGGGGTTTATTAACTCTGGGATCTTA AAGGTCGACGTGGACTGCTGCGAGAAGGATTTGTGCAATGGGGCGGCAGGGGCAGGGCAC AGCCCCTGGGCCCTGGCCGGGGGGCTCCTGCTCAGCCTGGGGCCTGCCCTCCTCTGGGCT GGGCCCTGA >chr8_random|SGP_v1.0_predicted_protein_6|123_AA MPCPAHGLWCQDCTLTTNSSHCTPKQCQPSDTVCASVRITDPSSSRKDHSVNKMCASSCD FVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAGHSPWALAGGLLLSLGPALLWA GP* # Gene 7 (Forward). 1 exons. 199 aa. Score = 109.103628 Single 476785 477381 109.10 + 0 0 2.05 0.00 39.90 62.81 AA 1:199 gene_7 >chr8_random|SGP_v1.0_predicted_cDNA_7|597_NN ATGGAGAAGCCTGCAGGCAGAAAAAAGAAGACGCCGACCCCAAGGGAGGAGGCAGACGTG CAGAAGAGCGCGCTCAGAGAGGAGAAGGTGTCCGGGGACAGAAAGCCACCTGAGAGGCCC ACTGTGCCCAGGAAGCCCCGCACAGAGCCCTGCCTGAGTCCTGAAGACGAAGAGCACGTC TTTGATGCCTTCGACGCTTCATTTAAAGATGACTTTGAGGGGGTTCCCGTGTTCATTCCT TTTCAGAGGAAGAAACCCTATGAGTGCAGTGAGTGTGGGCGGATCTTTAAGCACAAGACA GACCACATTCGCCATCAGAGGGTCCACACTGGAGAGAAGCCCTTCAAGTGTGCGCAGTGC GGGAAGGCCTTCCGGCACAGCTCTGACGTCACCAAACACCAGAGGACTCACACGGGAGAG AAGCCCTTCAAATGCGGGGAGTGCGGGAAAGCCTTTAACTGCGGCTCCAATCTCCTGAAA CATCAGAAGACGCACACCGGGGAGAAGCCCTACGAATGCACGCACTGTGGGAAAGCCTTT GCCTACAGCTCCTGTCTCATCCGCCATCAGAAACGCCACCCTCGGAAGAAGCCCTGA >chr8_random|SGP_v1.0_predicted_protein_7|199_AA MEKPAGRKKKTPTPREEADVQKSALREEKVSGDRKPPERPTVPRKPRTEPCLSPEDEEHV FDAFDASFKDDFEGVPVFIPFQRKKPYECSECGRIFKHKTDHIRHQRVHTGEKPFKCAQC GKAFRHSSDVTKHQRTHTGEKPFKCGECGKAFNCGSNLLKHQKTHTGEKPYECTHCGKAF AYSSCLIRHQKRHPRKKP* # Gene 8 (Forward). 2 exons. 205 aa. Score = 277.235428 First 479721 479726 -5.05 + 0 0 3.17 2.36 -0.24 -0.60 AA 1: 2 gene_8 Terminal 504037 504645 282.28 + 0 0 2.54 0.00 100.94 151.60 AA 3:205 gene_8 >chr8_random|SGP_v1.0_predicted_cDNA_8|615_NN ATGGGGGTCAGCGTCTGTGTGTTCTATTTGCTCAGGTTTGAGGCGTTCGTCAAGAGTTTC AAGTATATCTCGCTGCTCCTGAAGCACCAGCGCATCCACACGGGCGAGAAGCCCTACGCC TGCCACGAGTGCGGCAAGCGCTTCCGCGGCTGGTCGGGCTTCATCCAGCACCACCGCATC CACACGGGCGAGAAGCCCTACGAGTGCGGCCAGTGCGGCCGCGCCTTCAGCCACAGCTCG CACTTCACGCAGCACCTGCGCATCCACAACGGCGAGAAGCCCTACAAGTGCGGCGAGTGC GGCCAGGCCTTCAGCCAGAGCTCCAACCTGGTGCGCCACCAGCGGCTGCACACGGGTGAG AAGCCCTACGCCTGCAGCCAGTGCGGCAAGGCCTTCATCTGGAGCTCCGTGCTCATCGAG CACCAGCGCATCCACACTGGCGAGAAGCCCTACGAGTGCTCCGACTGCGGCAAAGCCTTC CGCGGCCGCTCGCACTTCTTCCGGCACCTGCGGACCCACACGGGCGAGAAGCCCTTCGCG TGTGGCGCCTGCGGCAAGGCCTTCGGCCAGAGCTCCCAGCTCATCCAGCACCAGCGGGTG CACTACCGCGAGTAG >chr8_random|SGP_v1.0_predicted_protein_8|205_AA MGVSVCVFYLLRFEAFVKSFKYISLLLKHQRIHTGEKPYACHECGKRFRGWSGFIQHHRI HTGEKPYECGQCGRAFSHSSHFTQHLRIHNGEKPYKCGECGQAFSQSSNLVRHQRLHTGE KPYACSQCGKAFIWSSVLIEHQRIHTGEKPYECSDCGKAFRGRSHFFRHLRTHTGEKPFA CGACGKAFGQSSQLIQHQRVHYRE* # Gene 9 (Forward). 2 exons. 308 aa. Score = 247.656826 First 505978 506013 -5.67 + 0 0 0.20 4.44 2.49 -3.60 AA 1: 12 gene_9 Internal 523758 524647 253.32 + 0 2 0.87 0.66 79.44 155.63 AA 13:308 gene_9 >chr8_random|SGP_v1.0_predicted_cDNA_9|926_NN ATGGCCACCAGCGCTCTGGACGCCCCACTCTGCCAGGAAGCCAGAGAGAGGCCCGGAGGT TCCCCTCGAGGCCCGGTCACTTCTGAGAAAACTGGAGGACAGAGTGGCCTCGAGTCAGAC GTCCCTCCGAACGCAGGCCCCGGGGCAGAGGGCGGGGGCAGCTGGAAGGGGCGGCCTTTC CCGTGCGGCGCCTGTGGCCGCAGCTTCAAGTGCTCCTCGGACGCGGCAAAGCACCGGAGC ATCCACTCGGGGGAGAAACCGTACGAGTGCAGCGACTGCGGGAAGGCCTTCATCCACAGC TCGCACGTGGTCCGGCACCAGCGGGCGCACAGCGGGGAGAGGCCCTACGCGTGCGCCGAG TGCGGCAAGGCCTTCGGCCAGAGCTTCAACCTCCTCCGGCACCAGCGCGTGCACACGGGC GAGAAGCCCTACGCGTGCGCCGACTGCGGCAAGGCCTTCGGCCAGAGGTCGGACGCCGCC AAGCACCGCCGCACCCACACCGGGGAGAGGCTGTACGCGTGCGGCGAGTGCGGGAAGCGC TTCCTGCACAGCTCGAACGTGGTCCGGCACCGGCGGACCCACCACGGGGAGAACCCGTAC GAGTGCCGGGAGTGCGGCCAGGCCTTCAGCCAGAGCTCCAACCTCCTCCAGCACCAGCGC GTGCACACGGGGGAGCGGCCCTTCGCCTGCCAGGACTGCGGCCGCGCCTTCAGCCGCAGC TCCTTCCTCCGCGAGCACCGCCGCATCCACACCGGGGAGAAGCCCCACCAGTGCGGCCAC TGCGGGCGCGCGTTCCGGGCGCTGTCGGGCTTCTTCCGGCACCAGCGGCTCCACACGGGC GAGAAGCCGTTCCGCTGCACCGAGTGCGGCCGCGCCTTCCGCCTGAGCTTCCACCTCATC CAGCACCGGCGGGTGCATGGCGCCGA >chr8_random|SGP_v1.0_predicted_protein_9|308_AA MATSALDAPLCQEARERPGGSPRGPVTSEKTGGQSGLESDVPPNAGPGAEGGGSWKGRPF PCGACGRSFKCSSDAAKHRSIHSGEKPYECSDCGKAFIHSSHVVRHQRAHSGERPYACAE CGKAFGQSFNLLRHQRVHTGEKPYACADCGKAFGQRSDAAKHRRTHTGERLYACGECGKR FLHSSNVVRHRRTHHGENPYECRECGQAFSQSSNLLQHQRVHTGERPFACQDCGRAFSRS SFLREHRRIHTGEKPHQCGHCGRAFRALSGFFRHQRLHTGEKPFRCTECGRAFRLSFHLI QHRRVHGAa