## date Tue Jan 7 14:27:39 2003 ## source-version: geneid v 1.1 -- geneid@imim.es # Sequence chr10_random - Length = 141075 bps # Optimal Gene Structure. 4 genes. Score = 32.603506 # Gene 1 (Reverse). 3 exons. 260 aa. Score = 7.639279 Terminal 2228 2619 4.04 - 2 0 0.00 2.12 19.43 0.00 AA 130:260 chr10_random_1 Internal 13767 14082 4.20 - 0 1 0.49 4.72 15.19 0.00 AA 25:130 chr10_random_1 First 15605 15676 -0.60 - 0 0 4.55 2.24 0.82 0.00 AA 1: 24 chr10_random_1 >chr10_random_1|geneid_v1.1_predicted_cDNA_1|780_NN ATGGCTTCATTGATTGCCCATCACGGTGAGGACAGGGAAATGCGAGCTTGTGGGATTCTG GTGATGACAGAGTTCGAATCCCTGGCCAGTCTACTAGCCCACATGACGCAGTTACCTGGT CATTACTCCACGGTTCCCGTGAGGGCCCCACACCACGCCGCACAAGAGCCGCTCCTGCAT TCCGTCTTCACACGCAGGCCTGTCCATCTACTTGCTACTGTCACACTCTTGCCAGCAGAA GAGGCCCCTTTCATGGCCGATATCACCACCCAGTCTATCCTCACCCCACAGCTCTGCAGC GGGAACCTCCTGCTGGCCCACATGGCTGCCAGAGCCCATGCTGGCATGACGCTCCAGCAG GTCGGCGTCCCTGCGGGACACACTACCGCCCTGGCCAATCTTCTAGCCCACATGACGCAG TTACCTGGCCATTACTCCACGGTTCCTGTGATGGCCCCACACCCAGCCACACAAGAGCCG CTCCTGCATTCCGTCCTCACACGCAGGCCTGTCCATCTACTTGCTACTGTCACACTCTTG CCAGCAGAAGAGGCCCCTGTCATGGCCGACATCACCACCCAGTCTATCCTCACCCCACAG CTGTGCAGCGGGACCCTCCTGCTGGCCCACGTGGCTGCCAGAGCCCATGCTGGCATGACG CTCCAGCAGGACGGCGTCCCTGCGGGACACACTACCGGTGACATGGCTAGCATCACCCTC CTTCCTGGCAGTGACACTGTTGATGTGAACCCCAGTTTCACATCTGTCATTTGTAAATAG >chr10_random_1|geneid_v1.1_predicted_protein_1|260_AA MASLIAHHGEDREMRACGILVMTEFESLASLLAHMTQLPGHYSTVPVRAPHHAAQEPLLH SVFTRRPVHLLATVTLLPAEEAPFMADITTQSILTPQLCSGNLLLAHMAARAHAGMTLQQ VGVPAGHTTALANLLAHMTQLPGHYSTVPVMAPHPATQEPLLHSVLTRRPVHLLATVTLL PAEEAPVMADITTQSILTPQLCSGTLLLAHVAARAHAGMTLQQDGVPAGHTTGDMASITL LPGSDTVDVNPSFTSVICK* # Gene 2 (Forward). 2 exons. 87 aa. Score = 4.250893 First 18250 18384 2.73 + 0 0 3.96 0.22 13.07 0.00 AA 1: 45 chr10_random_2 Terminal 22407 22532 1.52 + 0 0 4.12 0.00 10.12 0.00 AA 46: 87 chr10_random_2 >chr10_random_2|geneid_v1.1_predicted_cDNA_2|261_NN ATGGCCGATATCACCACCCAGTCTATCCTCACCCCACAGCTGTGCAGCGGGACCCTCTTG CTGGCCCACGTGGCTGCCAGAGCCCATGCTGGCATGACGCTCCAGCAGGACGGCGTCCTG CGGGACACACTACCGAAACTCAGACCCAAGGGGCAGCTCCTCACCAGGGATGTGGAAATA CTCTACATCATCCCGCAGGGCTTCACCACTCTCACATCCATCATCAACAAAATTCCACAG CTTTACGTCTCCCTTTCCTAA >chr10_random_2|geneid_v1.1_predicted_protein_2|87_AA MADITTQSILTPQLCSGTLLLAHVAARAHAGMTLQQDGVLRDTLPKLRPKGQLLTRDVEI LYIIPQGFTTLTSIINKIPQLYVSLS* # Gene 3 (Reverse). 3 exons. 142 aa. Score = 2.403766 Terminal 36927 37173 2.05 - 1 0 0.00 -1.04 19.19 0.00 AA 60:142 chr10_random_3 Internal 37799 37837 0.07 - 1 2 1.30 3.09 6.08 0.00 AA 47: 60 chr10_random_3 First 52409 52548 0.28 - 0 2 -1.37 3.84 9.50 0.00 AA 1: 47 chr10_random_3 >chr10_random_3|geneid_v1.1_predicted_cDNA_3|426_NN ATGGACCTGTTAGTGCTGTCTCAGGGACACCAGACCAACATCCTGGACATCATCCACATA CACAAGGAAGCTCTTACCAAAGTCATGGAGAGCAGGCAACATGTGGCCGAAGGGAAGACA GAGGTGCAGAGGCTGATGATGGTAGAAGAACTGATGTACCCTGACCGGCAGCAAGTCAGA GATGCCTTCAAGAACATCAGTGAGCTCCTTGCCAATCCGTCCAGGAAGGACCTGGACCCA GCCACGGACCTGTTAGTGCTGTCTCAGGGACACCAGACCAACATCCTGGACATCATCCTC ATACACAAGGAAGCTCTTACCACAGTCATGGAGAACAGGCAACATGTGGCAGAAGGGAAG ACACAGGTACAGAGGCTGATGGCATCATTATCACAGGAACAGGATTTCTTTGGCCACTTT GGCTGA >chr10_random_3|geneid_v1.1_predicted_protein_3|142_AA MDLLVLSQGHQTNILDIIHIHKEALTKVMESRQHVAEGKTEVQRLMMVEELMYPDRQQVR DAFKNISELLANPSRKDLDPATDLLVLSQGHQTNILDIILIHKEALTTVMENRQHVAEGK TQVQRLMASLSQEQDFFGHFG* # Gene 4 (Reverse). 9 exons. 468 aa. Score = 18.309568 Terminal 63688 63750 -0.20 - 0 0 0.00 5.83 4.52 0.00 AA 448:468 chr10_random_4 Internal 64416 64565 0.72 - 0 0 1.60 0.76 12.01 0.00 AA 398:447 chr10_random_4 Internal 64953 65284 8.69 - 2 0 5.34 2.80 23.26 0.00 AA 287:397 chr10_random_4 Internal 76251 76326 -2.29 - 0 1 1.49 -0.37 6.36 0.00 AA 262:287 chr10_random_4 Internal 77883 78225 4.26 - 1 0 1.94 -3.69 27.01 0.00 AA 147:261 chr10_random_4 Internal 81550 81715 3.64 - 2 2 4.95 5.21 7.61 0.00 AA 92:147 chr10_random_4 Internal 94812 94896 1.00 - 0 1 5.20 0.04 8.38 0.00 AA 64: 92 chr10_random_4 Internal 121793 121846 -1.67 - 0 0 0.93 1.48 5.96 0.00 AA 46: 63 chr10_random_4 Internal 135967 136103 4.16 - 2 0 2.77 3.81 14.26 0.00 AA 1: 45 chr10_random_4 >chr10_random_4|geneid_v1.1_predicted_cDNA_4|1406_NN GGATCATGGCACAAGTTGCAGTTTCCACCCTGCCCATGGAAGATGAGGAGTCCATGGAAG ATGAGGAGTCTGTTGAAGATGATTCCGTGGAGAGCAGGATGGTGGTGACATTTCTCATAT CAGCTCTCGAGTCCACGGACATTTGTGAAGCCAGTGGAAAGCGAACAAACAAGCTGCTAA ATAAGTCACAACAGTGTGTCCCCGAGAAAGTGTCAGAGCCTTTACGTGGACCTTCTCATG AAAAAGGAAACAGAATAGTCAATGGAAAAGGAAAAGGGGTCAAAGAAGGAAATAATACAA ACAAAAGTGAAAAAATACAACTATCAGAAAATGTATGTCATAGTACATCTTCTGCTGCTG CTGACAGATTAACCAAACAAAGAAAGGTTGGGAAAACGTATCCTCAGCAATTTCCCAAGA AACTGAAGGAAGAGCATGATAGAAACTCTCCAAGCGACCTAAGCCAAACACAGCAGCAAA TAAAGGAAATGAAAGAGATGTATGAAAATGCAGAAGCTAAAGTGAATAATTCCACTGGAA AGTGGAGCTGTGTAGAAGAGAGGATATGTCAACTCCAACATGAAAATCCGTGCATTGAAC AGCAACTAGATGATGTTCATCAGAAAGAGGATCATAAAGAGATAGTAACTAATATCCAAA GAGGCTTTATTGAGAGTGAAAAGAAAGACCTCATGCTAGAAGAGAAAAATAAGAAGCTAA TGAATGAATGTGATCATTTAAAAGAAAGTCTCTTTCAATATGAGAGAGAGAAAGCAGAAA AAGTAGTGGTTGTGAGAAAACTTCAACAAGAAGCGGCTGACAGCCTAAAAAAATTAACTA TGTTAGAGTCTCCACTGGAAGATTATTCTCAGCCTACTTCATTATCAAGCTATACTATTT TATTCATGCAATTTGATGATCTTATGGCGGAGAAGGAAGCAGTATCTTCAAAATGTGTCA ATTTGCCTAAAGAGAATCAAGTTTTTCAACAGGAGTTATTATCTATGAAAAAAGTACAAC AGGAATGTGAAAAACTTGAGGAGGATAAAAATATGTTGGAAGAAGAAATATTAAATCTTA AGACACATATGGAAAACAGTATGGTAGAACTTAGTAAACTACAAGAATATAAATCAGAGC TAGATGAAAGGGCAATGCTGGCAGTAGAAAAATTAGAAGAAATCCATTTACAGTTGCTCA ATGAGCGAGAAGGACTGGAGACATCGCATGTAACACAGGAGGCTACACGACGGCACGGAG GCCGACGATCGCATACATTGCACTGTATGTCTGAATCACAGGGCGTCGCTGACATCGTGA CAGACTCAACTCGTGACACAATAGAACAAGCACAATATAAAAAACAATTAGAGCAGTTAA ACAAGGATATAATACAGCTTCACTAA >chr10_random_4|geneid_v1.1_predicted_protein_4|468_AA ggIMAQVAVSTLPMEDEESMEDEESVEDDSVESRMVVTFLISALESTDICEASGKRTNKL LNKSQQCVPEKVSEPLRGPSHEKGNRIVNGKGKGVKEGNNTNKSEKIQLSENVCHSTSSA AADRLTKQRKVGKTYPQQFPKKLKEEHDRNSPSDLSQTQQQIKEMKEMYENAEAKVNNST GKWSCVEERICQLQHENPCIEQQLDDVHQKEDHKEIVTNIQRGFIESEKKDLMLEEKNKK LMNECDHLKESLFQYEREKAEKVVVVRKLQQEAADSLKKLTMLESPLEDYSQPTSLSSYT ILFMQFDDLMAEKEAVSSKCVNLPKENQVFQQELLSMKKVQQECEKLEEDKNMLEEEILN LKTHMENSMVELSKLQEYKSELDERAMLAVEKLEEIHLQLLNEREGLETSHVTQEATRRH GGRRSHTLHCMSESQGVADIVTDSTRDTIEQAQYKKQLEQLNKDIIQLH*