## date Thu Apr 3 09:43:19 2003 ## source-version: geneid v 1.1 -- geneid@imim.es # Sequence chr4_random - Length = 953437 bps # Optimal Gene Structure. 3 genes. Score = 69.449101 # Gene 1 (Forward). 3 exons. 292 aa. Score = 39.074536 Internal 371331 371729 16.33 + 0 0 0.27 -0.61 51.25 -39.90 AA 1:133 gene_1 Internal 374379 374609 9.09 + 0 0 3.51 2.87 26.28 -23.10 AA 134:210 gene_1 Terminal 376192 376437 13.66 + 0 0 2.26 0.00 35.05 -24.30 AA 211:292 gene_1 >chr4_random|SGP_v1.0_predicted_cDNA_1|876_NN CCTGGCCACCGCCAGCTGGAGGTGTGGTTCCAGAACTGCTATGCTCGCTACCACCAGGCC TTCGCCGACTGCAACCAGTCGGAGCGGGAGCTGCAGGGGCGCGAGAGCCAGCAGCTGGCC GCAGAGACCCAGGCGCTGGCACAGCCGACACAGCAAGACTCCACGTGCAGGGTGGGCGAG CGACTGCAAGACACGCACAGCTGGAAGTCAGAGCTGCAGCACGAGGTGGAGGTGCTGGCT GCAGAGACCGACCTGCTGCTGGCCCAGAAGCAACGGCTGGAGCGTGCCCTGGATGCCATG GAGGTGCCCTTCTCCATCGCCACTGACAACATGCAGTGCAGCCAGCGCCACCAGCACGCC AACCTTGTGCGTGACTATGTGGAGACGGAGCTGCTGAAGCCCCGCAGCGCCTCCACCCCA GAGACCCGGACCAAGTTCACACAGGACAATCTGTGCCACGCCCAGCGCGAGCGCCTGGAC TCGGCCAACCTGTGGGTGCTGGTGGACTGCATCCTTCGCGACACCTCCGAGGACCTGGGA CTCCAGTGTGACGCCGTGAACCTGGCCTTCGGGCGCCGCTGTGAGGAACTGGAGGACGCG CGGCACAAGCTGCAGCACCACCTGCACAAGCCCCAGCTCACACCCCCCAACACCCCCAAG CTGGTGAGTGAGGTGGAGGAGCTGTACAAGTCCATCACAGCGCTGCGGGAGAAGCTTCTA CAAGCGGAGCAGTCCCTGCGCAACCTCAAGGACATCCACATGAGCCTGGAGAAGGACGTC ACTGCCATGACCAACAGTCTCTTCATCGACCGCCAGAAGTGCATGGCCCATCGTACTTGC TACCCCACCATTCTGCAGCTGGCTGGCTACCAGTGA >chr4_random|SGP_v1.0_predicted_protein_1|292_AA PGHRQLEVWFQNCYARYHQAFADCNQSERELQGRESQQLAAETQALAQPTQQDSTCRVGE RLQDTHSWKSELQHEVEVLAAETDLLLAQKQRLERALDAMEVPFSIATDNMQCSQRHQHA NLVRDYVETELLKPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILRDTSEDLG LQCDAVNLAFGRRCEELEDARHKLQHHLHKPQLTPPNTPKLVSEVEELYKSITALREKLL QAEQSLRNLKDIHMSLEKDVTAMTNSLFIDRQKCMAHRTCYPTILQLAGYQ* # Gene 2 (Reverse). 1 exons. 63 aa. Score = 4.539148 Single 874326 874514 4.54 - 0 0 0.00 1.31 25.28 -18.60 AA 1: 63 gene_2 >chr4_random|SGP_v1.0_predicted_cDNA_2|189_NN ATGTCCATCACAGCGCTGTGGGAGAAGCTTCTAGAAGGGGAGCAGTCCCTTTGCAACCTC GAGGACATCCACATGAGCCTGGAGAAGGATGTTACCGCCATGACCAACAGTCTCTTCATC GACCGCCAGAAGTGCATGGCCCATCGTACTTGCTACACCCCCATCCTGCAGCTGGCTGGC TACCAGTGA >chr4_random|SGP_v1.0_predicted_protein_2|63_AA MSITALWEKLLEGEQSLCNLEDIHMSLEKDVTAMTNSLFIDRQKCMAHRTCYTPILQLAG YQ* # Gene 3 (Reverse). 3 exons. 263 aa. Score = 25.835417 Terminal 875336 875509 -0.68 - 0 0 0.00 1.12 20.60 -17.10 AA 206:263 gene_3 Internal 876123 876353 9.63 - 0 0 2.87 3.51 26.68 -23.10 AA 129:205 gene_3 Internal 891991 892374 16.89 - 0 0 -0.61 0.05 50.81 -38.40 AA 1:128 gene_3 >chr4_random|SGP_v1.0_predicted_cDNA_3|789_NN CTGGAGGTGTGGTTCCAGAACTGCTATGCTCGCTACCACCAGGCCTTCGCCGACTGCAAC CAGTCAGAGCGGGAGCTGCAGGGGCACGAGAGCCAGCAGCTGGCCGCAGAGACCCAGGCG CTGGCACAGTCGACACAGCAAGACTCCACGTGCAGGGTGGGCGAGCGACTGCAGGACACG CACAGCTGGAAGTCGGAGCTGCAGCGCGAGGTGAAGGTGCTGGCTGCGGAGACCGACCTG CTGCTGGCCCAGAAGCAACGGCTGGAGTGCGCCCTGGATGCCATGGAGGTGCCCTTCTCC ATTGCCACTGACAACCTGCAGTGCAGCCAGTGCCACCAGCACGCCAACCTTGTGCATGAC CATGTGGAGACGGAGCTGCTGAAGCCCCGCAGCGCCTCCACCCCAGAGACCCGGACCAAG TTCACACAGGACAATCTGTGCCACGCCCAGCGCGAGCGCCTGGACTCGGCCAACCTGTGG GTGCTTGTGGACTGCATCCTTCGCGACACCTCCGAGGACCTGGGACTCCAGTGTGACGCC GTGAACCTGGCCTTCGGGCGCCGCTGTGAGGAACTGGAGGACGTGCGGCACAAGCTGCAG CACCACCTGCACAAGATGCTGCGGGAAATCACAGATCAGGAACACAACGTGGTGGCACTG AAGGAGGCCATCAAGGACAAGGAGGAACCTCTGCACATAGCCCAGACCCGGCTGTACCTG CTCTCACACCGGCCCAACATGCAGCTGTGCCGCGAAGCAGCCCAGTTCAGGTACTGCCTG GGCCTCTGA >chr4_random|SGP_v1.0_predicted_protein_3|263_AA LEVWFQNCYARYHQAFADCNQSERELQGHESQQLAAETQALAQSTQQDSTCRVGERLQDT HSWKSELQREVKVLAAETDLLLAQKQRLECALDAMEVPFSIATDNLQCSQCHQHANLVHD HVETELLKPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILRDTSEDLGLQCDA VNLAFGRRCEELEDVRHKLQHHLHKMLREITDQEHNVVALKEAIKDKEEPLHIAQTRLYL LSHRPNMQLCREAAQFRYCLGL*