## date Wed Jan 15 10:56:18 2003 ## source-version: geneid v 1.1 -- geneid@imim.es # Sequence chr15_random - Length = 655574 bps # Optimal Gene Structure. 6 genes. Score = 452.058411 # Gene 1 (Forward). 2 exons. 84 aa. Score = 3.474779 Internal 6459 6590 2.50 + 1 2 2.45 2.69 5.56 1.60 AA 1: 45 gene_1 Terminal 8402 8519 0.97 + 1 0 0.32 0.00 5.43 5.55 AA 45: 84 gene_1 chr15_random|SGP_v1.0_predicted_cDNA_1|250_NN CTTTGATCCTGTTGTGGATTTATTTACAAACATCAATTGCCTTCAAGCCATCCTTTCTGC TGTATGTTTTGCAGCCTTCTATAGTAGATACACAACAGATAATGTGGAGAGAAAAGACAT AAGAGGAGGAAGAAAAGAAACAGTGTGTTATGAGGACAGTGGATGCTACAACATTATTTG CCTTCAAGGCATTGCAAACAACCGGAATCAATTGAATAACCTTCTCAAGCACAAGCCAAC AGTGAAATGA chr15_random|SGP_v1.0_predicted_protein_1|84_AA cFDPVVDLFTNINCLQAILSAVCFAAFYSRYTTDNVERKDIRGGRKETVCYEDSGCYNII CLQGIANNRNQLNNLLKHKPTVK* # Gene 2 (Forward). 1 exons. 60 aa. Score = 7.860309 Single 31178 31357 7.86 + 0 0 0.28 0.00 6.45 11.09 AA 1: 60 gene_2 chr15_random|SGP_v1.0_predicted_cDNA_2|180_NN ATGACAAAAATCAACACAGCTTTCTCCAAACGCTGCCCGTGCCTGATGGAATTAAACAGA GCTCTGAGAAAAACAGCACCGGGGCCGAGGATGGGTCCTGAGCTGCCTACAGTCATCAAC ATCTTGGCCAGTGGCTATGCATTCAGGGGCAATTTGGCTAGCTTTCTTGATCCACACTAG chr15_random|SGP_v1.0_predicted_protein_2|60_AA MTKINTAFSKRCPCLMELNRALRKTAPGPRMGPELPTVINILASGYAFRGNLASFLDPH* # Gene 3 (Forward). 3 exons. 90 aa. Score = 2.608563 First 56015 56043 -4.74 + 0 2 4.04 0.76 2.84 -2.90 AA 1: 10 gene_3 Internal 94804 94864 -3.15 + 1 0 2.23 2.59 7.05 -6.10 AA 10: 30 gene_3 Terminal 95709 95888 10.50 + 0 0 -0.80 0.00 14.33 6.57 AA 31: 90 gene_3 chr15_random|SGP_v1.0_predicted_cDNA_3|270_NN ATGCAGCACAACCAGCCCACAATTCAGGGCGGGCCCCCAGAGAAGGAGGGCGGAGAAGCT GGAAAGCGACTGCGGAGCTGCCGGCGGCAGAATACAGACTATGAAGATGATAAGATACTA GAGAATGTAAACTATAACGACAGAGCTGGAAAACATAGGGAGCAGATTGGAAGCGAAGGA AATTTCCAAAGAGATGATGCTCCTGCATCTGTTCATTCTGAAATTACTGATAGCGACAAA AGTCAGAAGATGTTGAAAAAGATGTGTTGA chr15_random|SGP_v1.0_predicted_protein_3|90_AA MQHNQPTIQGGPPEKEGGEAGKRLRSCRRQNTDYEDDKILENVNYNDRAGKHREQIGSEG NFQRDDAPASVHSEITDSDKSQKMLKKMC* # Gene 4 (Reverse). 7 exons. 186 aa. Score = 65.176912 Terminal 99517 99522 -7.88 - 0 0 0.00 4.24 0.00 -0.30 AA 185:186 gene_4 Internal 128379 128397 2.25 - 1 0 5.34 5.97 1.10 -1.90 AA 178:184 gene_4 Internal 133251 133361 10.22 - 1 2 -1.92 1.56 9.32 10.49 AA 141:178 gene_4 Internal 134346 134437 7.30 - 0 2 -1.54 2.35 8.57 6.82 AA 111:141 gene_4 Internal 137622 137726 16.82 - 0 0 2.74 4.06 6.90 9.56 AA 76:110 gene_4 Internal 139918 140080 20.81 - 1 0 -1.48 1.77 9.45 21.91 AA 21: 75 gene_4 First 149167 149228 15.66 - 0 2 2.89 6.02 6.88 3.74 AA 1: 21 gene_4 chr15_random|SGP_v1.0_predicted_cDNA_4|558_NN ATGGCCGAGTACTCTTATGCGAAGTCTACCAAGCTTGTGCTCAAGGGAACCAAGACGAAG AGAATCACCCTGAAATCTGGCTATGGAAAATATCTTGGTATAAATTCAGATGAACTTGTT GTTGGGCATTCAGATGCAATTGGACCAAGAGAACAATGGGAACCAGTCTTTCAAAACCTA AGTGCTGTTATTGTTTATAAAAACTTCCTGTCAGTTTCACACAAAGGGAAAATGGCTTTG TTGGCCTCAAATGGCTGCTTTATTAGATGCAATGAAGCAGGGGACATAGAAGCAAAAAGT AAAACAGCAGGAGAAGAAGAAATGATCAAGATTAGATCCTGTGCTGAAAGAGAAACCAAG AAAAAAGATGACATTCCAGAAGAAGACAAAGGAAATGTAAAACAATGTGAAATCAATTAT GTAAAGAAATTTCAGAGCTTCCAAGAGCACAAACTTAAAATAAGTAAAGAAGACAGTAAA ATTCTTAAAAAGGCTCAGAAAGATGGATTTTTGCAAGAGACGCTTCTGGACAGACAGAAA TTGCAAACTCAGGTGTGA chr15_random|SGP_v1.0_predicted_protein_4|186_AA MAEYSYAKSTKLVLKGTKTKRITLKSGYGKYLGINSDELVVGHSDAIGPREQWEPVFQNL SAVIVYKNFLSVSHKGKMALLASNGCFIRCNEAGDIEAKSKTAGEEEMIKIRSCAERETK KKDDIPEEDKGNVKQCEINYVKKFQSFQEHKLKISKEDSKILKKAQKDGFLQETLLDRQK LQTQV* # Gene 5 (Reverse). 8 exons. 476 aa. Score = 333.988535 Terminal 400498 400669 39.45 - 1 0 0.00 -6.00 4.23 57.25 AA 419:476 gene_5 Internal 400845 401094 105.74 - 2 2 0.05 -3.42 23.81 90.70 AA 336:419 gene_5 Internal 401211 401422 88.82 - 1 1 -0.10 -1.81 15.40 83.10 AA 265:336 gene_5 Internal 401449 401611 19.80 - 2 2 -1.05 -1.26 11.97 19.38 AA 211:265 gene_5 Internal 401637 401810 58.78 - 2 1 -0.72 -1.39 12.34 57.55 AA 153:211 gene_5 Internal 401865 402014 1.18 - 2 1 1.18 1.14 5.71 4.34 AA 103:153 gene_5 Internal 402061 402297 21.12 - 2 1 3.14 4.22 8.54 10.76 AA 24:103 gene_5 First 404235 404304 -0.89 - 0 1 3.11 -2.08 3.93 3.66 AA 1: 24 gene_5 chr15_random|SGP_v1.0_predicted_cDNA_5|1428_NN ATGATCTTCAAGCTAGAACAAGGAGCAGAGCCATGGATAGTAGAAGAAACCCCAAACCTG AGACTTTCAGCTGTCCAGATCATTGATGACCTTATTGAAAGGAGCCATGAAAGTCATGAT AGATTTTTCTGGAAAATTGTAATCACCAACAGCAACACATCAACTCAGGAGAGAGTTGAA TTAGGAAAAACATTTAATTTGAACTCAAACCATGTTTTAAATCTGATTATAAATAATGGA AACAGTTCAGAAATGAAGCCTGGGCAGTTTAATGTCTGCCAGAACGTGCTTTTCCCTATT AAGCCTGGAGATCCCACAGACGTCATGAACATCTTACTCAGCATCACAAGATTCAAACTC TGCTGCAGGCCTTTTCAATGTAATGAACAAGTGAAAACCTTCAACATGGAGGCAATGTTC TTTATACATAAGAGGGTTCATATAGGACAGACCGTTGGGATAACTCAGGTAGGACAGCCA ACTTGCTGTAGAAAGTCTGACTTCACCAAACATCAGCAAACACACACAGGAGAGAAACCC CATGAATGTGTTGAATGTGAGAAACCCTCCGTTAGCAAATCAGACCTTATGATACAGCAC AAGATGCCTACTGAGGAAAAACCTTATGCCTCTGTAAGTCTGGCCTCACTATCCATCAGA GAATTCACACAGGGGGAAAAGCCCTATGGATGCAATGAATGTGGAAAAACCGTTTGCCAT AAGTCATTCCTTACTTTACATCAGAGAACTCATACTGGGGAAAAACCATATGCATGTAAC AAATGTGGAAAAACTACATCACAGAACTCACACGGGAAAAACCCTATGAATGTAATGAAT GTGGAAAATCCTTTTACTGTAAGTCATAAGTCATTTCTAACTATACGTCAGAGAACTCAT GCTGGCAAAAAACCCTATGAATGTAATAAATGTGAGAAAACCTTTATCAATAAATTAAAC CTTGGGATACACAAGAGAACTCACACAGGGGAAAGACCCTATGAATTCATTCCTCACCAT ACACCAGAGTACTCACACGGGGAGAAACCGTATGGATGTAACGAAAGTGGAAAAACTTTT TGTCAGAAATCATACCTTATTATACATCAGAGAACTCACACTGGGGAAAAGCTCTATGAA TGTAATGAATGTGGAAAATCCTTTCATCAGAAGGCAAATATTCAGAAGCATCAAGGTATT CACACGGGGGAGAAACCCTATGAATGTAGCAAATGTGGAAAAACCTTCAGTCAGAATATA CATCAGAGAACACACACAGGAGAAAACCCTTATAAATGTAAGGAATGTGGGAAAACCTTT TGCCGGAAGTCACACCTCAGCAGGCATCAACAAACCCATATAGGAGAGAAATCTGATATA GCTGATGCAGGCTATGTATTCCCTCAAAATCACTTTTTTTTCCCTTGA chr15_random|SGP_v1.0_predicted_protein_5|476_AA MIFKLEQGAEPWIVEETPNLRLSAVQIIDDLIERSHESHDRFFWKIVITNSNTSTQERVE LGKTFNLNSNHVLNLIINNGNSSEMKPGQFNVCQNVLFPIKPGDPTDVMNILLSITRFKL CCRPFQCNEQVKTFNMEAMFFIHKRVHIGQTVGITQVGQPTCCRKSDFTKHQQTHTGEKP HECVECEKPSVSKSDLMIQHKMPTEEKPYASVSLASLSIREFTQGEKPYGCNECGKTVCH KSFLTLHQRTHTGEKPYACNKCGKTTSQNSHGKNPMNVMNVENPFTVSHKSFLTIRQRTH AGKKPYECNKCEKTFINKLNLGIHKRTHTGERPYEFIPHHTPEYSHGEKPYGCNESGKTF CQKSYLIIHQRTHTGEKLYECNECGKSFHQKANIQKHQGIHTGEKPYECSKCGKTFSQNI HQRTHTGENPYKCKECGKTFCRKSHLSRHQQTHIGEKSDIADAGYVFPQNHFFFP* # Gene 6 (Reverse). 5 exons. 188 aa. Score = 38.949313 Terminal 582789 582961 -5.11 - 2 0 0.00 2.35 -4.64 12.19 AA 131:188 gene_6 Internal 614760 614842 3.93 - 1 1 0.89 2.87 4.08 5.15 AA 103:131 gene_6 Internal 636269 636379 15.25 - 1 2 1.89 1.56 8.32 11.13 AA 66:103 gene_6 Internal 637360 637451 8.08 - 0 2 -1.54 2.35 9.13 6.82 AA 36: 66 gene_6 Internal 640638 640742 16.80 - 0 0 2.74 4.06 6.88 9.56 AA 1: 35 gene_6 chr15_random|SGP_v1.0_predicted_cDNA_6|564_NN GGGAAAATGGCTTTGTTGGCCTCAAATGGCTGCTTTATTAGATGCAATGAAGCAGGGGAC ATAGAAGCAAAAAGTAAAACAGCAGGAGAAGAAGAAATGATCAAGATTAGATCCTGTGCT GAAAGAGAAACCAAGAAAAAAGATGACATTCCAGAAGAAGACAAAGGAAATGTCAAACAA TGTGAAATCAATTATGTAAAGAAATTTCAGAGCTTCCAAGAGCACAAACTTAAAATAAGT AAAGAAGACAGTAAAATTCTTAAAAAGGCTCAGAAAGATGGATTTTTGCATGAGACGCTT CTGGACAGCTTGGATCCTGTTGTGGATTTATTTACAGACATCAATTGCCTTCAAGACATC CTTTCTGCTGTATGTTTTGCAGCCTTCTATAGTGAGCTGGAGATCTGTGGCAATTCTTTT GACATGAGGCTGGACATTCTTTATAGCTTCCCCAGACACAGGAATTGGCAGGGCTTGAAA AAGAATCACTGGCAGGAGGTTCATTTTCTTTATTGCTACCTCCCCAGCCATAAAACTAAA AGCTTTTTACCTAAATCAGGTTAG chr15_random|SGP_v1.0_predicted_protein_6|188_AA GKMALLASNGCFIRCNEAGDIEAKSKTAGEEEMIKIRSCAERETKKKDDIPEEDKGNVKQ CEINYVKKFQSFQEHKLKISKEDSKILKKAQKDGFLHETLLDSLDPVVDLFTDINCLQDI LSAVCFAAFYSELEICGNSFDMRLDILYSFPRHRNWQGLKKNHWQEVHFLYCYLPSHKTK SFLPKSG*