## date Wed Apr 10 11:06:44 2002 ## source-version: geneid v 1.1 -- geneid@imim.es # Sequence chrY_random - Length = 238523 bps # Optimal Gene Structure. 3 genes. Score = 108.833172 # Gene 1 (Forward). 2 exons. 46 aa. Score = 1.193532 First 111374 111445 1.23 + 0 0 3.59 2.39 6.61 0.00 AA 1: 24 gene_1 Terminal 139778 139843 -0.04 + 0 0 4.59 0.00 5.52 0.00 AA 25: 46 gene_1 >chrY_random|geneid_v1.1_predicted_cDNA_1|138_NN ATGGAGAATAAAAGCCTGGAGAGCTCCCAGACAGACCTGAAGCTGGTGGCCCACCCCCGC GCCAAGAGCAAGCTGCCCTTCTGCCGAGAACACCCGGAGCTGAGGGTTCCAAGTTCACGG CGGAACCGCTTCCCTTAA >chrY_random|geneid_v1.1_predicted_protein_1|46_AA MENKSLESSQTDLKLVAHPRAKSKLPFCREHPELRVPSSRRNRFP* # Gene 2 (Reverse). 2 exons. 641 aa. Score = 107.388898 Terminal 141696 143441 106.31 - 0 0 0.00 -4.92 285.66 0.00 AA 60:641 gene_2 First 156433 156609 1.07 - 0 0 4.53 1.78 6.98 0.00 AA 1: 59 gene_2 >chrY_random|geneid_v1.1_predicted_cDNA_2|1923_NN ATGGGAGCCTCCACCTTCTCAAGAAAGACAAAAGTGACCAGAAAAAGCTGGGAGCATCAA AAAAAGCCAGGTGAAGTGATTATTTGGGAAGACCACCTTCATGGGCAGGCCATTTTCCAT GGTGGCACCGTCAACGCTGGCATAGGACAGAAGCACCACACTGGAGGAATGGAGAAGGCC GGCCACGGCTACGACAGCAAGAAGCAGCAGGAGCTGACGGCCGCCGTGCTGGGCCTCATC TGCGAGGGGCTGTACCCAGCCTCCATCGTGGACGAGCCCACCTTCAAGGTGCTGCTGAAG ACGGCCGACCCCCGGTATGAGCTGCCCAGCCGGAAGTACATCTCTACCAAGGCCATCCCT GAGAAGTACGGGGCCGTCCGGGAGGTGATCCTGAAGGAGCTGGCCGAGGCCACCTGGTGT GGCATCTCCACCGACATGTGGAGGAGTGAGAATCAGAACCGCGCCTACGTCACGCTGGCC GCCCACTTCCTGGGCCTGGGCGCCCCCAACTGCCTGTCCATGGGCTCCCGCTGCCTGAAG ACCTTCGAGGTGCCCGAAGAGAACACGGCGGAGACCATCACGCGAGTGCTCTATGAGGTC TTCATCGAGTGGGGCATCAGCGCCAAGGTCTTCGGGGCCACCACCAACTATGGCAAGGAC ATCGTGAAGGCGTGCTCCCTGCTGGACGTCGCAGTGCACATGCCCTGCCTGGGCCACACC TTCAATGCCGGCATCCAGCAGGCCTTCCAGCTCCCGAAGCTGGGGGCGCTGCTGTCGCGC TGCCGCAAACTGGTGGAGTACTTCCAGCAGTCTGCCGTGGCCATGTACATGCTCTATGAG AAGCAGAAGCAGCAGAACGTGGCCCACTGCATGCTGGTGAGCAACCGCGTCTCCTGGTGG GGGAGCACGCTGGCCATGCTGCAGCGCCTCAAGGAGCAGCAGTTCGTCATCGCCGGGGTC TTGGTGGAGGACAGCAACAACCACCACCTCATGCTGGAGGCCAGCGAGTGGGCCACCATC GAGGGGCTGGTGGAGCTCCTGCAGCCCTTCAAGCAGGTGGCCGAGATGCTGTCGGCCTCC AGGTACCCCACCATCAGCATGGTGAAGCCGCTGCTGCACATGCTCCTGAACACCACGCTC AACATCAAGGAGACCGACTCCAAGGAGCTCAGCATGGCCAAGGAGGTCATCGCCAAGGAG CTTTCCAAGACCTACCAGGAGACGCCCGAGATCGACATGTTTCTCAACGTGGCCACCTTC CTGGACCCCCGCTACAAGAGGCTGCCCTTCCTCTCCGCCTTCGAGCGGCAGCAGGTGGAG AATCGCGTGGTGGAAGAGGCCAAGGGCCTGCTGGACAAGGTCAAAGACGGCGGCTACCGG CCGGCTGAGGACAAGATCTTCCCGGTGCCCGAGGAGCCTCCCGTCAAGAAGCTCATGCGG ACATCCACGCCGCCGCCCGCCAGCGTCATCAACAACATGCTGGCCGAGATCTTCTGCCAG ACAGGCGGCGTGGAGGACCAGGAAGAGTGGCATGCCCAGGTGGTGGAGGAGCTGAGCAAC TTCAAGTCCCAGAAGGTGCTTGGCCTCAACGAAGACCCCCTCAAGTGGTGGTCAGACCGC CTGGCCCTCTTCCCCCTGCTGCCCAAGGTGCTGCAGAAGTACTGGTGCGTGACGGCCACG CGCGTCGCCCCTGAGCGTCTCTTCGGATCCGCCGCCAACGTGGTCAGCGCCAAGAGGAAC CGGCTGGCTCCCGCGCACGTGGACGAGCAGGTGTTTCTGTATGAGAACGCCCGGAGTGGG GCAGAGGCGGAACCCGAGGACCAGGACGAGGGGGAGTGGGGCCTGGACCAGGAGCAGGTG TTCTCCTTGGGGGATGGCGTCAGCGGCGGTTTCTTTGGCATTAGGGACAGCAGCTTCCTG TAG >chrY_random|geneid_v1.1_predicted_protein_2|641_AA MGASTFSRKTKVTRKSWEHQKKPGEVIIWEDHLHGQAIFHGGTVNAGIGQKHHTGGMEKA GHGYDSKKQQELTAAVLGLICEGLYPASIVDEPTFKVLLKTADPRYELPSRKYISTKAIP EKYGAVREVILKELAEATWCGISTDMWRSENQNRAYVTLAAHFLGLGAPNCLSMGSRCLK TFEVPEENTAETITRVLYEVFIEWGISAKVFGATTNYGKDIVKACSLLDVAVHMPCLGHT FNAGIQQAFQLPKLGALLSRCRKLVEYFQQSAVAMYMLYEKQKQQNVAHCMLVSNRVSWW GSTLAMLQRLKEQQFVIAGVLVEDSNNHHLMLEASEWATIEGLVELLQPFKQVAEMLSAS RYPTISMVKPLLHMLLNTTLNIKETDSKELSMAKEVIAKELSKTYQETPEIDMFLNVATF LDPRYKRLPFLSAFERQQVENRVVEEAKGLLDKVKDGGYRPAEDKIFPVPEEPPVKKLMR TSTPPPASVINNMLAEIFCQTGGVEDQEEWHAQVVEELSNFKSQKVLGLNEDPLKWWSDR LALFPLLPKVLQKYWCVTATRVAPERLFGSAANVVSAKRNRLAPAHVDEQVFLYENARSG AEAEPEDQDEGEWGLDQEQVFSLGDGVSGGFFGIRDSSFL* # Gene 3 (Reverse). 1 exons. 15 aa. Score = 0.250741 Terminal 180792 180838 0.25 - 2 0 0.00 2.84 8.87 0.00 AA 1: 15 gene_3 >chrY_random|geneid_v1.1_predicted_cDNA_3|47_NN AGGATGACATCGTCATTCAGGTGGCCATGAAGAAAGGCTTTGAATGA >chrY_random|geneid_v1.1_predicted_protein_3|15_AA agDDIVIQVAMKKGFE*