## date Wed Apr 10 10:42:17 2002 ## source-version: geneid v 1.1 -- geneid@imim.es # Sequence chr12_random - Length = 1567423 bps # Optimal Gene Structure. 9 genes. Score = 69.292482 # Gene 1 (Reverse). 2 exons. 100 aa. Score = 1.849559 Internal 49788 50048 0.82 - 0 0 -1.43 1.85 13.92 0.00 AA 14:100 gene_1 First 63334 63372 1.03 - 0 0 4.55 3.30 3.30 0.00 AA 1: 13 gene_1 >chr12_random|geneid_v1.1_predicted_cDNA_1|300_NN ATGAAGACGGCTGAAGGGGCCTGCCTAGAGGGTGTGGAGGATCAAGATGACCACAACCCA GCCAAGGACAAAGACCTCACAGGTGCTCATTGTCCACCCCCAGGAGGGTGCCCACAGACC TTCAAGAAGATGATTTTCACTCCTCTTGCACTTTGCCCTCATTCAGAAATCCAGGAACAG TTCGACACAGCGACAGAGAAGGAAGCCGGCAACGGGATGCGGCAAGCATTTCTGTCACCC AAACGCTGGCATTCCTGGCCAAGTCACCCGCTTGACACTTTTTCCCGGATTCCCGTGATG >chr12_random|geneid_v1.1_predicted_protein_1|100_AA MKTAEGACLEGVEDQDDHNPAKDKDLTGAHCPPPGGCPQTFKKMIFTPLALCPHSEIQEQ FDTATEKEAGNGMRQAFLSPKRWHSWPSHPLDTFSRIPVM # Gene 2 (Reverse). 7 exons. 382 aa. Score = 18.350724 Terminal 273519 273581 -0.19 - 0 0 0.00 5.83 4.53 0.00 AA 362:382 gene_2 Internal 274216 274497 9.49 - 0 0 5.34 1.62 27.03 0.00 AA 268:361 gene_2 Internal 287394 287736 4.00 - 1 0 1.94 -3.69 26.38 0.00 AA 153:267 gene_2 Internal 288094 288314 3.52 - 0 2 -0.98 5.07 16.43 0.00 AA 80:153 gene_2 Internal 301447 301475 -0.32 - 2 0 3.31 5.43 -0.17 0.00 AA 70: 79 gene_2 Internal 313225 313255 1.35 - 0 1 5.38 4.78 1.89 0.00 AA 60: 70 gene_2 First 346557 346733 0.50 - 0 0 1.07 -0.46 14.08 0.00 AA 1: 59 gene_2 >chr12_random|geneid_v1.1_predicted_cDNA_2|1146_NN ATGGGTCCTAATAAGGTTTACAATCCAGAAACTCAAGATATCCAGACAGAAGGATGCAGT CTCCGCTTTCAAGGCAGCAGCAGTACCTGGATTACTAAGCCAATCCCCAACACAATCATA AACACAAATTTGATTGAGGAAGAAGCTTGCCCACCAGAAGATTTAGGTTATTACAAGATG TTGGAATTCCTGATGAATCTGCAGTCAGGGCCTCCTGCAAAACATCCTTCCTTGAAGGAT TTTCATAATCAGGAAGAAATGAAAGATCTGATGGATGAAAATTGCATTTTGAAGACAGAT ATTGCTATACTCCGACAGGAAATATGCACAATGAAAAATGACAACCTGGAAAAAGAAAAT AAATATCTTAAGGACGCTAAAATTGTTAAAAAAACAAATGCTGCCCTTGAAAAGTATATA AAACTCAATGAGGAATTGATAACAAAAACAGCATTCCGAAACTCTCCAAACGACCTAAGC CAAACACAGCAGCAAATAAAGGAAATGAAAGAGATGTATGAAAATGCAGAAGCTAAAGTG AATAATTCCACTGGAAAGTGGAGCTGTGTAGAAGAGAGGATATGTCAACTCCAACATGAA AATCCGTGCATTGAACAGCAACTAGATGATGTTCATCAGAAAGAGGATCATAAAGAGATA ATAACTAATATCCAAAGAGGCTTTATTGAGAGTGGAAAGAAAGACCACATGCTAGAAGAG AAAAATAAGAAGCTAATGAATGAATGTGATCATTTAAAAGAAAGTCTCTTTCAATATGAG AGAGAGAAAGCAGAAAGAGTATTTGATGATCTTATGGCGGAGAAGGAAGCTGTATCTTCA AAATGTGTCAATTTGGCTAAAGAGAATCAAGTTTTTCAACAGGAGTTATTATCTATGAAA AAAGTACAACAGGAATGTGAAAAACTTGAGGAGGATAAAAAGATGTTGGAAGAAGAAATA TTAAATCTTAAGACACATATGGAAAACAGTATGGTAGAACTTAGTAAACTACAAGAATAT AAATCAGAGCTAGATGAAAGGGCAATGCAGGCAGTAGAAAAATTAGAAGAAATCCATTTA CAGGAACAAGCACAATATAAAAAACAATTAGAGCAGTTAAACAAGGATATAATACAGCTT CACTAA >chr12_random|geneid_v1.1_predicted_protein_2|382_AA MGPNKVYNPETQDIQTEGCSLRFQGSSSTWITKPIPNTIINTNLIEEEACPPEDLGYYKM LEFLMNLQSGPPAKHPSLKDFHNQEEMKDLMDENCILKTDIAILRQEICTMKNDNLEKEN KYLKDAKIVKKTNAALEKYIKLNEELITKTAFRNSPNDLSQTQQQIKEMKEMYENAEAKV NNSTGKWSCVEERICQLQHENPCIEQQLDDVHQKEDHKEIITNIQRGFIESGKKDHMLEE KNKKLMNECDHLKESLFQYEREKAERVFDDLMAEKEAVSSKCVNLAKENQVFQQELLSMK KVQQECEKLEEDKKMLEEEILNLKTHMENSMVELSKLQEYKSELDERAMQAVEKLEEIHL QEQAQYKKQLEQLNKDIIQLH* # Gene 3 (Forward). 5 exons. 423 aa. Score = 11.310681 First 351893 351953 -3.65 + 0 1 -0.78 3.39 0.72 0.00 AA 1: 21 gene_3 Internal 378574 378666 0.37 + 2 1 4.15 3.11 3.80 0.00 AA 21: 52 gene_3 Internal 380603 380839 2.34 + 2 1 4.22 3.14 8.55 0.00 AA 52:131 gene_3 Internal 381090 381431 2.46 + 2 1 -1.39 -0.14 22.18 0.00 AA 131:245 gene_3 Terminal 381805 382340 9.79 + 2 0 -3.42 0.00 43.34 0.00 AA 245:423 gene_3 >chr12_random|geneid_v1.1_predicted_cDNA_3|1269_NN ATGGAAAAAAATAACCAACTTTCACTGGTGAACTTTGTCTTCAATCATTGTTTTCCCGTG GGGCATTGCATTACCAAACCTGAGATGATCTTCAAGCTAGAACAAGGAGCAGAGCCATGG ATAGTAGAAGAAACCCCAAACCTGAGACTTTCAGCTGTCCAGATCATTGATGACCTTATT GAAAGGAGCCATGAAAGTCATGATAGATTTTTCTGGAAAATTGTAATCACCAACAGCAAC ACATCAACTCAGGAGAGAGTTGAATTAGGAAAAACATTTAATTTGAACTCAAACCATGTT TTAAATCTGATTATAAATAATGGAAACAGTTCAGAAATGAAGCCTGGGCAGTTTAATGTC TGCCAGAACGTGCTTTTCCCTATTAAGCCTGGGATAACTCAGGTAGGACAGCCAACTTGC TGTAGAAAGTCTGACTTCACCAAACATCAGCAAACACACACAGGAGAGAAACCCCATGAA TGTGTTGAATGTGAGAAACCCTCCATTAGCAAATCAGACCTTATGATACAGCACAAGATG CCTACTGAGGAAAAACCTTATGCCTGTAACTGGTGTGAAAAATTGTTCAGCTGTAAGTCT GGCCTCACTATCCATCAGAGAATTCACACAGGGGAAAAGCCCTATGGATGCAACGAATGT GGAAAAACCGTTTGCCATAAGTCATTCCTCACTTTACATCAGAGAACTCATACTGGGGGA AAACCATATGCATTCATTCCTCACCATACACCAGAGTACTCACACGGGGAGAAACCGTAT GGATGTAACGAAAGTGGAAAAACTTTTTGTCAGAAATCATACCTTATTATACATCAGAGA ACTCACACTGGGGAAAAGCTCTATGAATGTAATGAATGTGGAAAATCCTTTCATCAGAAG GCAAATCTTCAGAAGCATCAAGGTATTCACACGGGGGAGAAACCCTATGAATGTAGCAAA TGTGGAAAAACCTTCAGTCAGAAGTCAGTCCTCACTGTACATCATAGAACTCAGACTGGA GAAAAACCTTTCGAATGTAATCAGTGTGGGAAAACTTTTTGTTACAAGTCAAACCTCAAT ATGCATCAGGGAATTCACTCAGGAGAGAAACCCTGTGAATGTGATGAATGTAGGAAAACT TTTTACCATAAGGCAGTTCTCACCATACATCAGAGAACTTACACAGGTGAGAAGCCATTT GAATGTAAGAAAACCTTCTCCCAGAAGTCAAAACTCTTTGTACAGCACAGAACTCACACA GGGGAATAA >chr12_random|geneid_v1.1_predicted_protein_3|423_AA MEKNNQLSLVNFVFNHCFPVGHCITKPEMIFKLEQGAEPWIVEETPNLRLSAVQIIDDLI ERSHESHDRFFWKIVITNSNTSTQERVELGKTFNLNSNHVLNLIINNGNSSEMKPGQFNV CQNVLFPIKPGITQVGQPTCCRKSDFTKHQQTHTGEKPHECVECEKPSISKSDLMIQHKM PTEEKPYACNWCEKLFSCKSGLTIHQRIHTGEKPYGCNECGKTVCHKSFLTLHQRTHTGG KPYAFIPHHTPEYSHGEKPYGCNESGKTFCQKSYLIIHQRTHTGEKLYECNECGKSFHQK ANLQKHQGIHTGEKPYECSKCGKTFSQKSVLTVHHRTQTGEKPFECNQCGKTFCYKSNLN MHQGIHSGEKPCECDECRKTFYHKAVLTIHQRTYTGEKPFECKKTFSQKSKLFVQHRTHT GE* # Gene 4 (Reverse). 3 exons. 127 aa. Score = 2.566980 Terminal 399013 399102 -2.19 - 0 0 0.00 1.48 6.05 0.00 AA 98:127 gene_4 Internal 413211 413365 5.10 - 2 0 2.77 3.65 16.87 0.00 AA 46: 97 gene_4 First 424694 424829 -0.35 - 0 1 0.22 2.17 8.05 0.00 AA 1: 46 gene_4 >chr12_random|geneid_v1.1_predicted_cDNA_4|381_NN ATGGCCGATATCACCACCCAGTCTATCCTCACCCCACAGCTGTGCAGCGGGAACCTCCTG CTGGCCCACGTGGTTGCCACAGCCCATGCTGGCACGACGCTCCAGCAGGTCGGCGTCCCT GCGGGCCACACTACCGGGATCATGGCACAAGTTGCAGTTTCCACCCTGCCCATGGAAGAT GAGGAGTCCATGGAAGATGAGGAGTCCATTGAAGATGAGGAGTCTGTTGAAGATGATTCC GTGGAGAGCAGGATGGTGGTGACATTTCTCATATCAGCTCCCGAGTCCACGGACATTTGT GAAGCCAGTGGAAAGCGAAAAAACAAGCTGCTAAATAAGTCACAAGTGTGTTCTCATACA GTTTTGCGATTAACTAAATAG >chr12_random|geneid_v1.1_predicted_protein_4|127_AA MADITTQSILTPQLCSGNLLLAHVVATAHAGTTLQQVGVPAGHTTGIMAQVAVSTLPMED EESMEDEESIEDEESVEDDSVESRMVVTFLISAPESTDICEASGKRKNKLLNKSQVCSHT VLRLTK* # Gene 5 (Reverse). 2 exons. 172 aa. Score = 3.846888 Terminal 543878 544246 5.08 - 0 0 0.00 3.23 21.61 0.00 AA 50:172 gene_5 First 546031 546177 -1.23 - 0 0 0.56 -1.82 12.55 0.00 AA 1: 49 gene_5 >chr12_random|geneid_v1.1_predicted_cDNA_5|516_NN ATGAAAATTAAAATTTCTTCTAGTGAAGAACAAAATGATACCCGGAAGCAACTTTCCAAG GAACAGAATGCTAGAATATTACAAGATGAGATTCTGACTACTAAACAGAAGCAGATAGAA GTGGCCGAAAAAAAAATGAATTTTGAGATTTCTCTTAGCCATAAGGAAGAAAAAGAACTC TTGCATGAAAATAGCATGATGCAGGAAGAAATTGCCATGCTAAGAATAGAACTAGACACA ATAAAACATCAGAACCAGCTAAGGGAAAAGAAATATCTGGAGTACATTAAAAGTGTGAAA GAAAAGAATGATAATCTTCTAAAGGCTATACAATTGAATGAGGAAGCACTAACAAAAGCA GTAGTTCAGTACAGTGGACAGCTTAGCATTTTGACAACTGAGAATAAAATGCTCAGTTTT GAACTGCAGAATGTAAGACACAACAATGAAACACTGGAAATGGAAATTCAATCATGTCAT TTTAGACTGGCTACTGCTCTACATGATTGTGACTGA >chr12_random|geneid_v1.1_predicted_protein_5|172_AA MKIKISSSEEQNDTRKQLSKEQNARILQDEILTTKQKQIEVAEKKMNFEISLSHKEEKEL LHENSMMQEEIAMLRIELDTIKHQNQLREKKYLEYIKSVKEKNDNLLKAIQLNEEALTKA VVQYSGQLSILTTENKMLSFELQNVRHNNETLEMEIQSCHFRLATALHDCD* # Gene 6 (Reverse). 3 exons. 264 aa. Score = 21.388243 Terminal 1229239 1229383 1.64 - 1 0 0.00 0.43 15.94 0.00 AA 216:264 gene_6 Internal 1229530 1229807 10.61 - 0 2 0.93 1.93 34.73 0.00 AA 124:216 gene_6 First 1230705 1231073 9.14 - 0 0 2.81 0.23 30.80 0.00 AA 1:123 gene_6 >chr12_random|geneid_v1.1_predicted_cDNA_6|792_NN ATGGACAACCAGACCATTCTAGCTGTCCCATCATTACTGGATGGCCAAGGAGCAGTCCCT GATCCCAGAGGCCAGAGTGTCAATGCGTCCCCTGCTATCCAGCCATTGGATGATGAGGAT GTCTTTCTCTGTGGGAAGTGTAAGAAGCAATTCAACTCGCTGCCAGTGTTTATGACCCAC AAGCGGGAACAGTGCCAAAGAAATGCCCCCGACCTGGACACAGTCTCGCTGGTCACCAAC AGCATCTACACAATCTACACACCTTCGGCAGCACCCACAGCGGTCCAGCAGGCCTCGCCT CCTGCCAATTGCCAGATCTCTACATACATCACAGTGCCCCTGTCCCCACTGATCCAGGGG AACATCTTGTTCTGCCCCAGCAAGTTCAGCACCTATTTCCAGCTCAAGTCTCACATGACC CAGCATAAGAACGAGCAGGTGTACAAATGTGTGGTCAAAAGCTGTGCCCAAACGTTCCCA AAGCTCGACACATTTCTGGAGCACATCAAGAGCCACCAGGAGGAGCTGAGCTACCCCGGC CACTTCTGCAACAAGGACTTACCCCCGATGTACGACCTGAGCGTGCACCAGTACTCCCAC AGCCTCCTTCCACAGCACAGCCCCAAGAAGGGCAGTGCCGTCTACAATGGGGGCAGGTTC AAGGGCCAGGTGTGCAAGAAGTCCTCCCGGCGGGTGCATTACCTCAAACTGCGCGCTCAC AACCACTCAGGCGAGAAGCCCTACAAATGCTCGGTGTGCGAGTCCGCATTCAACCTCAAG GACAAACTGTAA >chr12_random|geneid_v1.1_predicted_protein_6|264_AA MDNQTILAVPSLLDGQGAVPDPRGQSVNASPAIQPLDDEDVFLCGKCKKQFNSLPVFMTH KREQCQRNAPDLDTVSLVTNSIYTIYTPSAAPTAVQQASPPANCQISTYITVPLSPLIQG NILFCPSKFSTYFQLKSHMTQHKNEQVYKCVVKSCAQTFPKLDTFLEHIKSHQEELSYPG HFCNKDLPPMYDLSVHQYSHSLLPQHSPKKGSAVYNGGRFKGQVCKKSSRRVHYLKLRAH NHSGEKPYKCSVCESAFNLKDKL* # Gene 7 (Reverse). 1 exons. 62 aa. Score = 0.272850 Single 1367191 1367376 0.27 - 0 0 0.00 1.67 11.93 0.00 AA 1: 62 gene_7 >chr12_random|geneid_v1.1_predicted_cDNA_7|186_NN ATGTCGCGTTCTCACGACCAGGGCGCAGGCTTGGATTTTTTCTCGCGGGGCGCCGGCCCT ATTAGATGGCGGGACGTCCAGGCCAAACAAACACTGCGGGGTGAAGACGCGCGGTCACAA AGACGCTCTCTCCCATCGTGGATGTCAAAGACTCAAGCACACAACGGTCCAACCTGGGGC TTATAG >chr12_random|geneid_v1.1_predicted_protein_7|62_AA MSRSHDQGAGLDFFSRGAGPIRWRDVQAKQTLRGEDARSQRRSLPSWMSKTQAHNGPTWG L* # Gene 8 (Reverse). 7 exons. 291 aa. Score = 7.003567 Terminal 1445401 1445647 -0.01 - 1 0 0.00 2.43 10.08 0.00 AA 209:291 gene_8 Internal 1447592 1447674 0.10 - 0 2 2.26 5.80 1.92 0.00 AA 182:209 gene_8 Internal 1465056 1465163 3.76 - 0 0 2.65 3.94 13.28 0.00 AA 146:181 gene_8 Internal 1479395 1479427 0.56 - 0 0 2.94 6.76 0.61 0.00 AA 135:145 gene_8 Internal 1494296 1494426 -0.35 - 2 0 -1.58 6.47 5.53 0.00 AA 91:134 gene_8 Internal 1533004 1533037 -0.45 - 0 1 0.02 5.24 4.72 0.00 AA 80: 91 gene_8 First 1537089 1537325 3.39 - 0 0 -2.15 2.75 21.33 0.00 AA 1: 79 gene_8 >chr12_random|geneid_v1.1_predicted_cDNA_8|873_NN ATGGCCTATTTATCCAGTAACTCCCATGAGTCATTGGCTCAATACTATGACTCGTTCTTG AAGAAAAGTTCCAAGAACACAGATGAGGCAGAACTAGAAGATACACTCAATCATATAATG GTTGTCTTCAAGTACATAGAGGACAAAGATGTGTTTCAGAAGTTCTATGCAAAAATGCTG GCCAAGAGGCTCATCTACCAGAACAGTGATGATGCAAATGATGATGCCAGTAACCATATC AATGAAGGACAAATTGACTTCTCTGAAAAAGGGTTTCTTGGTATTTTAGGGACACCTGCT GACGGTGTCAGCTGCCAGAATATTGCTGGCACCACATGGTACGAAACAACAAAAGAGCAA AGACAGGGCACTGTTGGCTGGGCTGCTCGGCAGGCTGCCACTATGGAAAGAAGGAGAGGA GGCAAGTATTATGAGAAAGCGTCCCTGGATACTGGACAGATGGCGTTTACCTTGGCCCAA CTTGAGTCCTTGGAGATTTGCCTGAAAGAAGCAGAAGAAAAGGCTAAAGCTTTATCTGAA CAGCACAGACACACTCACCTAGACTCTCAGACATGGGCACAGTCACCTCGCGTTCATCAC AATGAAAACATAGTGAACTTTCCCAGGATGAGCCGTGTGACTAGATTGGGTGAGTCCAGG ACATACAGACCAAAATCCAGGAATGATTCTGAGCTGTGGACTGCAGGGATCCTACCTGTA CTTCCTGTCAGAGCAGAAAGTGAAGCGGATACAGGTTCACCTGGGTCTACAAATGCATCC AGGGAGAGATACAGCAACTGGCTGGGAGAAAGTAGCTGGTGTCTTTGGACAAGCAACAGG GAAGATGGAGCAGCAGTTGCAGGTGAACAGTGA >chr12_random|geneid_v1.1_predicted_protein_8|291_AA MAYLSSNSHESLAQYYDSFLKKSSKNTDEAELEDTLNHIMVVFKYIEDKDVFQKFYAKML AKRLIYQNSDDANDDASNHINEGQIDFSEKGFLGILGTPADGVSCQNIAGTTWYETTKEQ RQGTVGWAARQAATMERRRGGKYYEKASLDTGQMAFTLAQLESLEICLKEAEEKAKALSE QHRHTHLDSQTWAQSPRVHHNENIVNFPRMSRVTRLGESRTYRPKSRNDSELWTAGILPV LPVRAESEADTGSPGSTNASRERYSNWLGESSWCLWTSNREDGAAVAGEQ* # Gene 9 (Forward). 2 exons. 47 aa. Score = 2.702991 First 1541287 1541370 -0.91 + 0 0 -0.43 3.24 6.01 0.00 AA 1: 28 gene_9 Internal 1549610 1549666 3.61 + 0 0 5.31 6.29 5.40 0.00 AA 29: 47 gene_9 >chr12_random|geneid_v1.1_predicted_cDNA_9|141_NN ATGGCCCCAAAGACAGTTCAGAGATTATCAGGGACATCATCTCAGCTTCAACAGGCCAAA TATCCTCCAACTAAAGCCATGATGTGCATCCAGAAATTGCAAGCTGAAGTAAAAGCTTCC CAGGAGCAACTTATAGCCCAG >chr12_random|geneid_v1.1_predicted_protein_9|47_AA MAPKTVQRLSGTSSQLQQAKYPPTKAMMCIQKLQAEVKASQEQLIAQ