## date Sat Nov 23 16:24:45 2002
## source-version: geneid v 1.1 -- geneid@imim.es
# Sequence chr4_random - Length = 398820 bps
# Optimal Gene Structure. 9 genes. Score = 544.863023 
# Gene 1 (Reverse). 1 exons. 121 aa. Score = 53.309955 
   First      918     1279	53.31	- 0 2	 0.80	 2.76	34.48	13.16	AA   1:121 gene_1

>chr4_random|SGP_v1.0_predicted_cDNA_1|362_NN
ATGTCCCTAATGGTCTCGGCTGGCCGGGCTGGGGCCGTGTGGTCCCCAACCCACGTGCAG
GTGACGGTGCTGCAGGCGCGGGCCTGGCGCCAAGGGCCCGGGGGCACGAGCGACGCGTAC
GCGGTGATCCAGGTGGGCAAGGAGAAGTACGCCACTCCGTGTCGGAGCGCAGCCGTGGGC
CGCGTGTGGCGCGAGGAGGCCACCTTCGAGCTGCCATCGCTGCTGTCCTCCGGACCCGCG
GCCGCCGCCACCCTGCAGCTCACCGTGCTGCACCGCGCGCTGCTCGGCCTCGACAAGTTC
CTGGGCCGCGCCGAGGTGGACCTGCGGGATCTGCACCGCGACCAGGGCCGCAGGAAGACG
CA

>chr4_random|SGP_v1.0_predicted_protein_1|121_AA
MSLMVSAGRAGAVWSPTHVQVTVLQARAWRQGPGGTSDAYAVIQVGKEKYATPCRSAAVG
RVWREEATFELPSLLSSGPAAAATLQLTVLHRALLGLDKFLGRAEVDLRDLHRDQGRRKT
ca

# Gene 2 (Reverse). 3 exons. 173 aa. Score = 19.737316 
Terminal    53588    53905	10.63	- 0 0	 0.00	 3.93	 2.74	14.93	AA  68:173 gene_2
Internal    82561    82603	-6.66	- 1 0	-1.80	 6.98	 3.13	-4.30	AA  53: 67 gene_2
   First   120377   120534	15.77	- 0 2	-3.11	-0.30	17.37	10.13	AA   1: 53 gene_2

>chr4_random|SGP_v1.0_predicted_cDNA_2|519_NN
ATGATTTTAGCCCAGCAGGTGGAATACCTGGTCAGGAAGAAGCACATCTATATCCCCAAG
AACGGTCAGATTAACTTCAGCTGTATCAATGCCAACAACATAAATTACATCACTGAGGGC
ATCAATGAGGCTGTCCTCCTCACAGAGAGCTCAGAGATGTCAGCATACCTGCTCAATCAA
TACCTGTTGCAGGAATTAACTTTTGTCGAGGGCTTTGATGATGAGAGCAGAGGCAGAAGG
TACCCCCTCAATCTGGGCCTGTCTGTTCTGGTCAGTTTCACTGTAATCCTCATACGCTTC
CAGTCACTGATTGCCTTGGCAATGTCATCATCAACTTTTAGAGACAGACCTAGGGGGCTG
ATCTTGGGAGCCAGTGCAGATGTGGCACTGACTTCACCCCCAGTACACCCCAGGTGTATG
AATTTGATCTCACTGGGGTTGAACTTAGGCAGCTGGTGTCAGATGAACCTGGATTTGGGA
CAGCAGAAGAAAGTTGCCCCACATCCTCCTCCAAGCTGA

>chr4_random|SGP_v1.0_predicted_protein_2|173_AA
MILAQQVEYLVRKKHIYIPKNGQINFSCINANNINYITEGINEAVLLTESSEMSAYLLNQ
YLLQELTFVEGFDDESRGRRYPLNLGLSVLVSFTVILIRFQSLIALAMSSSTFRDRPRGL
ILGASADVALTSPPVHPRCMNLISLGLNLGSWCQMNLDLGQQKKVAPHPPPS*

# Gene 3 (Reverse). 6 exons. 310 aa. Score = 98.546806 
Terminal   121040   121253	23.89	- 1 0	 0.00	 4.32	 8.21	18.10	AA 239:310 gene_3
Internal   121741   121906	 4.37	- 2 2	 4.19	 0.44	 4.62	 5.03	AA 184:239 gene_3
Internal   122756   122906	32.27	- 0 1	 2.04	 6.59	11.57	15.33	AA 134:184 gene_3
Internal   123313   123422	 9.87	- 2 0	 0.74	 0.87	 9.31	 6.67	AA  97:133 gene_3
Internal   123674   123785	 9.38	- 0 1	 2.78	 3.87	 2.37	 8.06	AA  60: 97 gene_3
   First   124736   124912	18.78	- 0 0	 2.69	-1.60	 7.48	17.87	AA   1: 59 gene_3

>chr4_random|SGP_v1.0_predicted_cDNA_3|930_NN
ATGACAAATGAAGGCCATCCCTGGGTTTCTCTCGTGGTGCAGAAGACTCGACTACAGATT
TCACAGGATCCCTCCCTGAATTATGAGTACTTGCCCACCATGGGCCTGAAATCATTCATC
CAGGCCTCTCTAGCACTCCTCTTTGGAAAGCACAGCCAAGCCATTGTGGAGAACAGGGTA
GGGGGTGTACACACTGTTGGTGACAGTGGTGCCTTCCAGCTTGGCGTCCAGTTTCTCAGA
GCTTGGCATAAGGATGCTCGTATAGTTTACATCATCTCTTCTCAAAAAGAACTGCATGGA
CTCGTCTTCCAGGACATGGGCTTTACAGTTTATGAATACTCTGTCTGGGACCCCAAGAAG
CTATGCATGGACCCCGACATACTCCTCAATGTGGTGGAGAGCAAGCAGATATTCCCATTT
TTTGATATTCCCTGTCAAGGTTTATACACCAGTGACTTGGAAGAAGATACTAGAATCTTA
CAATACTTTGTGTCTCAAGGCTTTGAGTTCTTCTGCAGCCAGTCTCTGTCCAAGAATTTT
GGCATTTATGATGAAGGAGTGGGGATGCTAGTGGTGGTGGCAGTCAACAACCAGCAGCTG
CTGTGTGTCCTCTCCCAGCTGGAAGGATTAGCCCAGGCCCTGTGGCTAAACCCCCCCAAC
ACGGGTGCACGTGTCATCACCTCCATCCTCTGCAACCCTGCTCTGCTGGGAGAATGGAAG
CAGAGTCTAAAAGAAGTTGTAGAGAACATCATGCTAACCAAGGAAAAAGTGAAGGAGAAA
CTCCAGCTCCTGGGAACCCCTGGGTCCTGGGGTCACATCACCGAGCAGAGTGGGACCCAC
GGCTATCTTGGACTCAACTGTAAGGGTCTAGGGGGCTGGTGTCCCCCCTTTCTGACCTTT
GGCCTGTATTTGAGCATTAAACTTCACTGA

>chr4_random|SGP_v1.0_predicted_protein_3|310_AA
MTNEGHPWVSLVVQKTRLQISQDPSLNYEYLPTMGLKSFIQASLALLFGKHSQAIVENRV
GGVHTVGDSGAFQLGVQFLRAWHKDARIVYIISSQKELHGLVFQDMGFTVYEYSVWDPKK
LCMDPDILLNVVESKQIFPFFDIPCQGLYTSDLEEDTRILQYFVSQGFEFFCSQSLSKNF
GIYDEGVGMLVVVAVNNQQLLCVLSQLEGLAQALWLNPPNTGARVITSILCNPALLGEWK
QSLKEVVENIMLTKEKVKEKLQLLGTPGSWGHITEQSGTHGYLGLNCKGLGGWCPPFLTF
GLYLSIKLH*

# Gene 4 (Reverse). 1 exons. 35 aa. Score = 4.728448 
  Single   125969   126073	 4.73	- 0 0	 0.00	-0.41	11.06	 4.19	AA   1: 35 gene_4

>chr4_random|SGP_v1.0_predicted_cDNA_4|105_NN
ATGCCCACCCTTTCAGTGTTCATGGATGTGCCCATCGCCCACAAGCTAGAGGGCAGCTTG
TTAAAGACCTACAAACAAGATGATTACCGAACAAGATATTCTTAG

>chr4_random|SGP_v1.0_predicted_protein_4|35_AA
MPTLSVFMDVPIAHKLEGSLLKTYKQDDYRTRYS*

# Gene 5 (Forward). 3 exons. 192 aa. Score = 70.578486 
   First   141210   141461	36.02	+ 0 0	 7.56	 0.63	20.04	 8.65	AA   1: 84 gene_5
Internal   141541   141744	38.01	+ 0 0	-5.21	 0.53	26.24	20.63	AA  85:152 gene_5
Terminal   144918   145037	-3.45	+ 0 0	 0.82	 0.00	-0.24	 7.64	AA 153:192 gene_5

>chr4_random|SGP_v1.0_predicted_cDNA_5|576_NN
ATGGCTCCGTGGCCTCACGAGAACAGCTCTCTTGCCCCATGGCCGGACCTCCCCACCCTG
GCGCCCAATACCGCCAACACCAGTGGGCTGCCAGGGGTTCCGTGGGAGGCGGCCCTAGCC
GGGGCCCTGCTGGCGCTGGCGGTGCTGGCCACCGTGGGAGGCAACCTGCTGGTCATCGTG
GCCATCGCCTGGACTCCGAGACTCCAGACCATGACCAACGTGTTCGTGACTTCGCTGGCC
GCAGCCGACCTGCTGTGGACCTCGGTGGACGTGCTGTGTGTGACCGCCAGCATCGAAACC
CTGTGCGCCCTGGCCGTGGACCGCTACCTGGCTGTGACCAACCCGCTGCGTTACGGCGCA
CTGGTCACCAAGCGCTGCGCCCGGACAGCTGTGGTCCTGGTGTGGGTCGTGTCGGCCGCG
GTGTCGTTTGCGCCCATCATGAGCCAGTGGTGGCGCGAGGAGCTCGATAGATTTCCACAT
ATGGGTGTTCCCTGTGAATTGGACCTGGTCTGTGCTGCTCTCTTTTCTCCAGGAGCCCAG
GTTTTATTTCTCAGGATGTTTTCATACCAAAGATGA

>chr4_random|SGP_v1.0_predicted_protein_5|192_AA
MAPWPHENSSLAPWPDLPTLAPNTANTSGLPGVPWEAALAGALLALAVLATVGGNLLVIV
AIAWTPRLQTMTNVFVTSLAAADLLWTSVDVLCVTASIETLCALAVDRYLAVTNPLRYGA
LVTKRCARTAVVLVWVVSAAVSFAPIMSQWWREELDRFPHMGVPCELDLVCAALFSPGAQ
VLFLRMFSYQR*

# Gene 6 (Forward). 3 exons. 119 aa. Score = 73.476223 
   First   162180   162324	29.16	+ 0 1	 4.65	 2.99	10.34	13.91	AA   1: 49 gene_6
Internal   181861   182040	44.57	+ 2 1	 7.03	 3.07	15.26	20.35	AA  49:109 gene_6
Terminal   184826   184857	-0.26	+ 2 0	 7.27	 0.00	 3.75	-2.90	AA 109:119 gene_6

>chr4_random|SGP_v1.0_predicted_cDNA_6|357_NN
ATGTCCGGGGGCAGCAGCTGCAGCCAGACCCCAAGCCGGGCCATCCCCGCCACTCGCCGG
GTGGTGCTCGGCGACGGCGTGCAGCTCCCGCCCGGGGACTACAGCACGACCCCCGGCGGC
ACCGTCTTCAGCACCACCCCGGGAGGTACCAGGATCATCTATGACCGGAAATTCCTGATG
GAGTGTCGGAACTCACCTGTGACCAAAACACCCCCAAGGGATCTGCCCACCATTCCGGGG
GTCACCAGCCCTTCCAGTGATGAGCCCCCCATGGAAGCCAGCCAGAGCCACCTGCGCAAT
AGCCCAGAAGATAAGCGGGCGGGCGGTGAAGAGTCACAGTTTGAGATGGACATTTAA

>chr4_random|SGP_v1.0_predicted_protein_6|119_AA
MSGGSSCSQTPSRAIPATRRVVLGDGVQLPPGDYSTTPGGTVFSTTPGGTRIIYDRKFLM
ECRNSPVTKTPPRDLPTIPGVTSPSSDEPPMEASQSHLRNSPEDKRAGGEESQFEMDI*

# Gene 7 (Forward). 2 exons. 56 aa. Score = 3.072949 
   First   357025   357036	-8.20	+ 0 0	 4.72	-2.66	 1.74	-1.20	AA   1:  4 gene_7
Terminal   361747   361902	11.27	+ 0 0	-6.19	 0.00	15.78	11.02	AA   5: 56 gene_7

>chr4_random|SGP_v1.0_predicted_cDNA_7|168_NN
ATGAGCTCGCAGGACGCCGATGTTGACATCAGGGAATACATTGGGAAAAGGGCCTCCCAG
CATGTGAGTCAGAGCATCACAGAAGAGATTGAGACCCTGATGGGAGTCCTGGACAAGGAC
GATGGGGAGAGCACCGCCAGCAGCGGGGGTGGGTACTGGAAGATTTAA

>chr4_random|SGP_v1.0_predicted_protein_7|56_AA
MSSQDADVDIREYIGKRASQHVSQSITEEIETLMGVLDKDDGESTASSGGGYWKI*

# Gene 8 (Forward). 6 exons. 352 aa. Score = 201.093073 
   First   369891   369893	-8.33	+ 0 0	 1.64	 1.30	 0.00	-0.30	AA   1:  1 gene_8
Internal   371331   371729	80.01	+ 0 0	 0.27	-0.61	51.25	23.78	AA   2:134 gene_8
Internal   373140   373210	 9.01	+ 0 2	 2.87	-0.07	 9.28	 3.55	AA 135:158 gene_8
Internal   373575   373680	17.87	+ 1 0	 0.87	-0.68	15.44	 7.93	AA 158:193 gene_8
Internal   374379   374609	49.47	+ 0 0	 3.51	 2.87	26.28	17.29	AA 194:270 gene_8
Terminal   376192   376437	53.06	+ 0 0	 2.26	 0.00	35.05	15.10	AA 271:352 gene_8

>chr4_random|SGP_v1.0_predicted_cDNA_8|1056_NN
ATGCCTGGCCACCGCCAGCTGGAGGTGTGGTTCCAGAACTGCTATGCTCGCTACCACCAG
GCCTTCGCCGACTGCAACCAGTCGGAGCGGGAGCTGCAGGGGCGCGAGAGCCAGCAGCTG
GCCGCAGAGACCCAGGCGCTGGCACAGCCGACACAGCAAGACTCCACGTGCAGGGTGGGC
GAGCGACTGCAAGACACGCACAGCTGGAAGTCAGAGCTGCAGCACGAGGTGGAGGTGCTG
GCTGCAGAGACCGACCTGCTGCTGGCCCAGAAGCAACGGCTGGAGCGTGCCCTGGATGCC
ATGGAGGTGCCCTTCTCCATCGCCACTGACAACATGCAGTGCAGCCAGCGCCACCAGCAC
GCCAACCTTGTGCGTGACTATGTGGAGACGGAGCTGCTGAAGGAAGCTGAGCCCATCCGG
AACATTCAGGAGCTGCTGAAGAGAGCCATCGTGCAAGCAGTGAGCCAGATCCAACTGAAC
CGAGAGCACACGGAGATCTGCGAGATGGACTGGTTGGACAAGGTGGAGGCCTACAACCTC
GACGAGACTTGCGGGCGCCACCACAGCCAGAGCACCGAGCCCCGCAGCGCCTCCACCCCA
GAGACCCGGACCAAGTTCACACAGGACAATCTGTGCCACGCCCAGCGCGAGCGCCTGGAC
TCGGCCAACCTGTGGGTGCTGGTGGACTGCATCCTTCGCGACACCTCCGAGGACCTGGGA
CTCCAGTGTGACGCCGTGAACCTGGCCTTCGGGCGCCGCTGTGAGGAACTGGAGGACGCG
CGGCACAAGCTGCAGCACCACCTGCACAAGCCCCAGCTCACACCCCCCAACACCCCCAAG
CTGGTGAGTGAGGTGGAGGAGCTGTACAAGTCCATCACAGCGCTGCGGGAGAAGCTTCTA
CAAGCGGAGCAGTCCCTGCGCAACCTCAAGGACATCCACATGAGCCTGGAGAAGGACGTC
ACTGCCATGACCAACAGTCTCTTCATCGACCGCCAGAAGTGCATGGCCCATCGTACTTGC
TACCCCACCATTCTGCAGCTGGCTGGCTACCAGTGA

>chr4_random|SGP_v1.0_predicted_protein_8|352_AA
MPGHRQLEVWFQNCYARYHQAFADCNQSERELQGRESQQLAAETQALAQPTQQDSTCRVG
ERLQDTHSWKSELQHEVEVLAAETDLLLAQKQRLERALDAMEVPFSIATDNMQCSQRHQH
ANLVRDYVETELLKEAEPIRNIQELLKRAIVQAVSQIQLNREHTEICEMDWLDKVEAYNL
DETCGRHHSQSTEPRSASTPETRTKFTQDNLCHAQRERLDSANLWVLVDCILRDTSEDLG
LQCDAVNLAFGRRCEELEDARHKLQHHLHKPQLTPPNTPKLVSEVEELYKSITALREKLL
QAEQSLRNLKDIHMSLEKDVTAMTNSLFIDRQKCMAHRTCYPTILQLAGYQ*

# Gene 9 (Reverse). 2 exons. 91 aa. Score = 20.319767 
Terminal   385870   386040	18.13	- 0 0	 0.00	 1.18	 9.88	15.31	AA  35: 91 gene_9
Internal   391600   391701	 2.19	- 0 0	-0.87	 1.83	 2.14	10.29	AA   1: 34 gene_9

>chr4_random|SGP_v1.0_predicted_cDNA_9|273_NN
TGTCTGTGTGCTATGAAGATTGCACACAGGGGTCCAGATGCATCCTGTTTTGAGAATGTT
AATGGATACACCAGCTGCTGCTTTGGATTTCACCCATTGGTGGTGCAGCACCAGTTTGAA
TTTGAATACCAGACCAAAGTGGATGGTGAGATAATCCTTCATCTTTATGACAAAGGAGGA
ATTGAGCAAACAATTTGTACGTTGGTTGGTGTGTTTGCATTTGTTTTACTGGATTCTGCC
AATAAGAAAGTGTCCCTGGACAGAGATACATAA

>chr4_random|SGP_v1.0_predicted_protein_9|91_AA
CLCAMKIAHRGPDASCFENVNGYTSCCFGFHPLVVQHQFEFEYQTKVDGEIILHLYDKGG
IEQTICTLVGVFAFVLLDSANKKVSLDRDT*